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Editing gene: NICN1 (CAeditome ID:84276)

Gene summary for NICN1

Gene summary

Gene information	Gene symbol	NICN1
	Gene ID	84276
	Gene name	nicolin 1
	Synonyms	-
	Cytomap	3p21.31
	Type of gene	protein-coding
	Description	nicolin-1NPCEDRGPGs5tubulin polyglutamylase complex subunit 5
	Modification date	20210518
	UniProtAcc	Q9BSH3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NICN1	GO:0005654	Nicolin-1	0000052

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RNA A-to-I events for NICN1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000145029.10

RNA A-to-I editing events in Cancer.

CAediting_279934(49423132, -), CAediting_279935(49423456, -), CAediting_279936(49423462, -), CAediting_279937(49423487, -), CAediting_279938(49423491, -), CAediting_279939(49423494, -), CAediting_279940(49423500, -), CAediting_279941(49423503, -), CAediting_279942(49423512, -), CAediting_279943(49423513, -), CAediting_279944(49423514, -), CAediting_279945(49423535, -), CAediting_279946(49423540, -), CAediting_279947(49423545, -), CAediting_279948(49423550, -), CAediting_279949(49423552, -), CAediting_279950(49423553, -), CAediting_279951(49423554, -), CAediting_279952(49423565, -), CAediting_279953(49423587, -), CAediting_279954(49423589, -), CAediting_279955(49423591, -), CAediting_279956(49423594, -), CAediting_279957(49423600, -), CAediting_279958(49423608, -), CAediting_279959(49423632, -), CAediting_279960(49423644, -), CAediting_279961(49423656, -), CAediting_279962(49423669, -), CAediting_279963(49423670, -), CAediting_279964(49423673, -), CAediting_279965(49423674, -), CAediting_279966(49423680, -), CAediting_279967(49423693, -), CAediting_279968(49423694, -), CAediting_279969(49423699, -), CAediting_279970(49423700, -), CAediting_279971(49423715, -), CAediting_279972(49423717, -), CAediting_279973(49423730, -), CAediting_279974(49423749, -), CAediting_279975(49423755, -), CAediting_279976(49423847, -), CAediting_279977(49423852, -), CAediting_279978(49423853, -), CAediting_279979(49423854, -), CAediting_279980(49423855, -), CAediting_279981(49423858, -), CAediting_279982(49423863, -), CAediting_279983(49423866, -), CAediting_279984(49423867, -), CAediting_279985(49423878, -), CAediting_279986(49423879, -), CAediting_279987(49423884, -), CAediting_279988(49423886, -), CAediting_279989(49423887, -), CAediting_279990(49423889, -), CAediting_279991(49423890, -), CAediting_279992(49423899, -), CAediting_279993(49423904, -), CAediting_279994(49423914, -), CAediting_279995(49423917, -), CAediting_279996(49423919, -), CAediting_279997(49423938, -), CAediting_279998(49423947, -), CAediting_279999(49423955, -), CAediting_280000(49423956, -), CAediting_280001(49423958, -), CAediting_280002(49423961, -), CAediting_280003(49423965, -), CAediting_280004(49423971, -), CAediting_280005(49423978, -), CAediting_280006(49423982, -), CAediting_280007(49423987, -), CAediting_280008(49423988, -), CAediting_280009(49424014, -), CAediting_280010(49424017, -), CAediting_280011(49424018, -), CAediting_280012(49424019, -), CAediting_280013(49424021, -), CAediting_280014(49424022, -), CAediting_280015(49424024, -), CAediting_280016(49424026, -), CAediting_280017(49424027, -), CAediting_280018(49424028, -), CAediting_280019(49424029, -), CAediting_280020(49424030, -), CAediting_280021(49424033, -), CAediting_280022(49424044, -), CAediting_280023(49424045, -), CAediting_280024(49424046, -), CAediting_280025(49424048, -), CAediting_280026(49424054, -), CAediting_280027(49424055, -), CAediting_280028(49424058, -), CAediting_280029(49424064, -), CAediting_280030(49424067, -), CAediting_280031(49424069, -), CAediting_280032(49424070, -), CAediting_280033(49424075, -), CAediting_280034(49424078, -), CAediting_280035(49424083, -), CAediting_280036(49424088, -), CAediting_280037(49424097, -), CAediting_280038(49424101, -), CAediting_280039(49424115, -), CAediting_280040(49424118, -), CAediting_280041(49424123, -), CAediting_280042(49424124, -), CAediting_280043(49424132, -), CAediting_280044(49424140, -), CAediting_280045(49424147, -), CAediting_280046(49424151, -), CAediting_280047(49424174, -), CAediting_280048(49424185, -), CAediting_280049(49424390, -),

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RNA editing positional annotations for NICN1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_279934	chr3_49423132_-	UTR3
CAediting_279935	chr3_49423456_-	UTR3
CAediting_279936	chr3_49423462_-	UTR3
CAediting_279937	chr3_49423487_-	UTR3
CAediting_279938	chr3_49423491_-	UTR3
CAediting_279939	chr3_49423494_-	UTR3
CAediting_279940	chr3_49423500_-	UTR3
CAediting_279941	chr3_49423503_-	UTR3
CAediting_279942	chr3_49423512_-	UTR3
CAediting_279943	chr3_49423513_-	UTR3
CAediting_279944	chr3_49423514_-	UTR3
CAediting_279945	chr3_49423535_-	UTR3
CAediting_279946	chr3_49423540_-	UTR3
CAediting_279947	chr3_49423545_-	UTR3
CAediting_279948	chr3_49423550_-	UTR3
CAediting_279949	chr3_49423552_-	UTR3
CAediting_279950	chr3_49423553_-	UTR3
CAediting_279951	chr3_49423554_-	UTR3
CAediting_279952	chr3_49423565_-	splicing
CAediting_279953	chr3_49423587_-	UTR3
CAediting_279954	chr3_49423589_-	UTR3
CAediting_279955	chr3_49423591_-	UTR3
CAediting_279956	chr3_49423594_-	UTR3
CAediting_279957	chr3_49423600_-	UTR3
CAediting_279958	chr3_49423608_-	UTR3
CAediting_279959	chr3_49423632_-	UTR3
CAediting_279960	chr3_49423644_-	UTR3
CAediting_279961	chr3_49423656_-	UTR3
CAediting_279962	chr3_49423669_-	UTR3
CAediting_279963	chr3_49423670_-	UTR3
CAediting_279964	chr3_49423673_-	UTR3
CAediting_279965	chr3_49423674_-	UTR3
CAediting_279966	chr3_49423680_-	UTR3
CAediting_279967	chr3_49423693_-	UTR3
CAediting_279968	chr3_49423694_-	UTR3
CAediting_279969	chr3_49423699_-	UTR3
CAediting_279970	chr3_49423700_-	UTR3
CAediting_279971	chr3_49423715_-	UTR3
CAediting_279972	chr3_49423717_-	UTR3
CAediting_279973	chr3_49423730_-	UTR3
CAediting_279974	chr3_49423749_-	UTR3
CAediting_279975	chr3_49423755_-	UTR3
CAediting_279976	chr3_49423847_-	UTR3
CAediting_279977	chr3_49423852_-	UTR3
CAediting_279978	chr3_49423853_-	UTR3
CAediting_279979	chr3_49423854_-	UTR3
CAediting_279980	chr3_49423855_-	UTR3
CAediting_279981	chr3_49423858_-	UTR3
CAediting_279982	chr3_49423863_-	UTR3
CAediting_279983	chr3_49423866_-	UTR3
CAediting_279984	chr3_49423867_-	UTR3
CAediting_279985	chr3_49423878_-	UTR3
CAediting_279986	chr3_49423879_-	UTR3
CAediting_279987	chr3_49423884_-	UTR3
CAediting_279988	chr3_49423886_-	UTR3
CAediting_279989	chr3_49423887_-	UTR3
CAediting_279990	chr3_49423889_-	UTR3
CAediting_279991	chr3_49423890_-	UTR3
CAediting_279992	chr3_49423899_-	UTR3
CAediting_279993	chr3_49423904_-	UTR3
CAediting_279994	chr3_49423914_-	UTR3
CAediting_279995	chr3_49423917_-	UTR3
CAediting_279996	chr3_49423919_-	UTR3
CAediting_279997	chr3_49423938_-	UTR3
CAediting_279998	chr3_49423947_-	UTR3
CAediting_279999	chr3_49423955_-	UTR3
CAediting_280000	chr3_49423956_-	UTR3
CAediting_280001	chr3_49423958_-	UTR3
CAediting_280002	chr3_49423961_-	UTR3
CAediting_280003	chr3_49423965_-	UTR3
CAediting_280004	chr3_49423971_-	UTR3
CAediting_280005	chr3_49423978_-	UTR3
CAediting_280006	chr3_49423982_-	UTR3
CAediting_280007	chr3_49423987_-	UTR3
CAediting_280008	chr3_49423988_-	UTR3
CAediting_280009	chr3_49424014_-	UTR3
CAediting_280010	chr3_49424017_-	UTR3
CAediting_280011	chr3_49424018_-	UTR3
CAediting_280012	chr3_49424019_-	UTR3
CAediting_280013	chr3_49424021_-	UTR3
CAediting_280014	chr3_49424022_-	UTR3
CAediting_280015	chr3_49424024_-	UTR3
CAediting_280016	chr3_49424026_-	UTR3
CAediting_280017	chr3_49424027_-	UTR3
CAediting_280018	chr3_49424028_-	UTR3
CAediting_280019	chr3_49424029_-	UTR3
CAediting_280020	chr3_49424030_-	UTR3
CAediting_280021	chr3_49424033_-	UTR3
CAediting_280022	chr3_49424044_-	UTR3
CAediting_280023	chr3_49424045_-	UTR3
CAediting_280024	chr3_49424046_-	UTR3
CAediting_280025	chr3_49424048_-	UTR3
CAediting_280026	chr3_49424054_-	UTR3
CAediting_280027	chr3_49424055_-	UTR3
CAediting_280028	chr3_49424058_-	UTR3
CAediting_280029	chr3_49424064_-	UTR3
CAediting_280030	chr3_49424067_-	UTR3
CAediting_280031	chr3_49424069_-	UTR3
CAediting_280032	chr3_49424070_-	UTR3
CAediting_280033	chr3_49424075_-	ncRNA_exonic
CAediting_280034	chr3_49424078_-	ncRNA_exonic
CAediting_280035	chr3_49424083_-	ncRNA_exonic
CAediting_280036	chr3_49424088_-	ncRNA_exonic
CAediting_280037	chr3_49424097_-	ncRNA_exonic
CAediting_280038	chr3_49424101_-	ncRNA_exonic
CAediting_280039	chr3_49424115_-	ncRNA_exonic
CAediting_280040	chr3_49424118_-	ncRNA_exonic
CAediting_280041	chr3_49424123_-	ncRNA_exonic
CAediting_280042	chr3_49424124_-	ncRNA_exonic
CAediting_280043	chr3_49424132_-	ncRNA_exonic
CAediting_280044	chr3_49424140_-	ncRNA_exonic
CAediting_280045	chr3_49424147_-	ncRNA_exonic
CAediting_280046	chr3_49424151_-	ncRNA_exonic
CAediting_280047	chr3_49424174_-	ncRNA_exonic
CAediting_280048	chr3_49424185_-	ncRNA_exonic
CAediting_280049	chr3_49424390_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_279937	chr3_49423487_-	SINE	Alu	AluSp
CAediting_279938	chr3_49423491_-	SINE	Alu	AluSp
CAediting_279939	chr3_49423494_-	SINE	Alu	AluSp
CAediting_279940	chr3_49423500_-	SINE	Alu	AluSp
CAediting_279941	chr3_49423503_-	SINE	Alu	AluSp
CAediting_279942	chr3_49423512_-	SINE	Alu	AluSp
CAediting_279943	chr3_49423513_-	SINE	Alu	AluSp
CAediting_279944	chr3_49423514_-	SINE	Alu	AluSp
CAediting_279945	chr3_49423535_-	SINE	Alu	AluSp
CAediting_279946	chr3_49423540_-	SINE	Alu	AluSp
CAediting_279947	chr3_49423545_-	SINE	Alu	AluSp
CAediting_279948	chr3_49423550_-	SINE	Alu	AluSp
CAediting_279949	chr3_49423552_-	SINE	Alu	AluSp
CAediting_279950	chr3_49423553_-	SINE	Alu	AluSp
CAediting_279951	chr3_49423554_-	SINE	Alu	AluSp
CAediting_279952	chr3_49423565_-	SINE	Alu	AluSp
CAediting_279953	chr3_49423587_-	SINE	Alu	AluSp
CAediting_279954	chr3_49423589_-	SINE	Alu	AluSp
CAediting_279955	chr3_49423591_-	SINE	Alu	AluSp
CAediting_279956	chr3_49423594_-	SINE	Alu	AluSp
CAediting_279957	chr3_49423600_-	SINE	Alu	AluSp
CAediting_279958	chr3_49423608_-	SINE	Alu	AluSp
CAediting_279959	chr3_49423632_-	SINE	Alu	AluSp
CAediting_279960	chr3_49423644_-	SINE	Alu	AluSp
CAediting_279961	chr3_49423656_-	SINE	Alu	AluSp
CAediting_279962	chr3_49423669_-	SINE	Alu	AluSp
CAediting_279963	chr3_49423670_-	SINE	Alu	AluSp
CAediting_279964	chr3_49423673_-	SINE	Alu	AluSp
CAediting_279965	chr3_49423674_-	SINE	Alu	AluSp
CAediting_279966	chr3_49423680_-	SINE	Alu	AluSp
CAediting_279967	chr3_49423693_-	SINE	Alu	AluSp
CAediting_279968	chr3_49423694_-	SINE	Alu	AluSp
CAediting_279969	chr3_49423699_-	SINE	Alu	AluSp
CAediting_279970	chr3_49423700_-	SINE	Alu	AluSp
CAediting_279971	chr3_49423715_-	SINE	Alu	AluSp
CAediting_279972	chr3_49423717_-	SINE	Alu	AluSp
CAediting_279973	chr3_49423730_-	SINE	Alu	AluSp
CAediting_279974	chr3_49423749_-	SINE	Alu	AluSp
CAediting_279975	chr3_49423755_-	SINE	Alu	AluSp
CAediting_279976	chr3_49423847_-	SINE	Alu	AluSp
CAediting_279977	chr3_49423852_-	SINE	Alu	AluSp
CAediting_279978	chr3_49423853_-	SINE	Alu	AluSp
CAediting_279979	chr3_49423854_-	SINE	Alu	AluSp
CAediting_279980	chr3_49423855_-	SINE	Alu	AluSp
CAediting_279981	chr3_49423858_-	SINE	Alu	AluSp
CAediting_279982	chr3_49423863_-	SINE	Alu	AluSp
CAediting_279983	chr3_49423866_-	SINE	Alu	AluSp
CAediting_279984	chr3_49423867_-	SINE	Alu	AluSp
CAediting_279985	chr3_49423878_-	SINE	Alu	AluSp
CAediting_279986	chr3_49423879_-	SINE	Alu	AluSp
CAediting_279987	chr3_49423884_-	SINE	Alu	AluSp
CAediting_279988	chr3_49423886_-	SINE	Alu	AluSp
CAediting_279989	chr3_49423887_-	SINE	Alu	AluSp
CAediting_279990	chr3_49423889_-	SINE	Alu	AluSp
CAediting_279991	chr3_49423890_-	SINE	Alu	AluSp
CAediting_279992	chr3_49423899_-	SINE	Alu	AluSp
CAediting_279993	chr3_49423904_-	SINE	Alu	AluSp
CAediting_279994	chr3_49423914_-	SINE	Alu	AluSp
CAediting_279995	chr3_49423917_-	SINE	Alu	AluSp
CAediting_279996	chr3_49423919_-	SINE	Alu	AluSp
CAediting_279997	chr3_49423938_-	SINE	Alu	AluSp
CAediting_279998	chr3_49423947_-	SINE	Alu	AluSp
CAediting_279999	chr3_49423955_-	SINE	Alu	AluSp
CAediting_280000	chr3_49423956_-	SINE	Alu	AluSp
CAediting_280001	chr3_49423958_-	SINE	Alu	AluSp
CAediting_280002	chr3_49423961_-	SINE	Alu	AluSp
CAediting_280003	chr3_49423965_-	SINE	Alu	AluSp
CAediting_280004	chr3_49423971_-	SINE	Alu	AluSp
CAediting_280005	chr3_49423978_-	SINE	Alu	AluSp
CAediting_280006	chr3_49423982_-	SINE	Alu	AluSp
CAediting_280007	chr3_49423987_-	SINE	Alu	AluSp
CAediting_280008	chr3_49423988_-	SINE	Alu	AluSp
CAediting_280009	chr3_49424014_-	SINE	Alu	AluSp
CAediting_280010	chr3_49424017_-	SINE	Alu	AluSp
CAediting_280011	chr3_49424018_-	SINE	Alu	AluSp
CAediting_280012	chr3_49424019_-	SINE	Alu	AluSp
CAediting_280013	chr3_49424021_-	SINE	Alu	AluSp
CAediting_280014	chr3_49424022_-	SINE	Alu	AluSp
CAediting_280015	chr3_49424024_-	SINE	Alu	AluSp
CAediting_280016	chr3_49424026_-	SINE	Alu	AluSp
CAediting_280017	chr3_49424027_-	SINE	Alu	AluSp
CAediting_280018	chr3_49424028_-	SINE	Alu	AluSp
CAediting_280019	chr3_49424029_-	SINE	Alu	AluSp
CAediting_280020	chr3_49424030_-	SINE	Alu	AluSp
CAediting_280021	chr3_49424033_-	SINE	Alu	AluSp
CAediting_280022	chr3_49424044_-	SINE	Alu	AluSp
CAediting_280023	chr3_49424045_-	SINE	Alu	AluSp
CAediting_280024	chr3_49424046_-	SINE	Alu	AluSp
CAediting_280025	chr3_49424048_-	SINE	Alu	AluSp
CAediting_280026	chr3_49424054_-	SINE	Alu	AluSp
CAediting_280027	chr3_49424055_-	SINE	Alu	AluSp
CAediting_280028	chr3_49424058_-	SINE	Alu	AluSp
CAediting_280029	chr3_49424064_-	SINE	Alu	AluSp
CAediting_280030	chr3_49424067_-	SINE	Alu	AluSp
CAediting_280031	chr3_49424069_-	SINE	Alu	AluSp
CAediting_280032	chr3_49424070_-	SINE	Alu	AluSp
CAediting_280033	chr3_49424075_-	SINE	Alu	AluSp
CAediting_280034	chr3_49424078_-	SINE	Alu	AluSp
CAediting_280035	chr3_49424083_-	SINE	Alu	AluSp
CAediting_280036	chr3_49424088_-	SINE	Alu	AluSp
CAediting_280037	chr3_49424097_-	SINE	Alu	AluSp
CAediting_280038	chr3_49424101_-	SINE	Alu	AluSp
CAediting_280039	chr3_49424115_-	SINE	Alu	AluSp
CAediting_280040	chr3_49424118_-	SINE	Alu	AluSp
CAediting_280041	chr3_49424123_-	SINE	Alu	AluSp
CAediting_280042	chr3_49424124_-	SINE	Alu	AluSp
CAediting_280043	chr3_49424132_-	SINE	Alu	AluSp
CAediting_280044	chr3_49424140_-	SINE	Alu	AluSp
CAediting_280045	chr3_49424147_-	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for NICN1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_279952	chr3_49423565_-	49423561:49423583	3SS	0+2i	GGTTTCTCCATGTTGGTCAGGCT	2	GGTTTCTCCATGTTGGTCGGGCT	-5.95
IR	CAediting_280031	chr3_49424069_-	49424068:49424076	5SS	0+5i	GAGTTCAAG	-8.37	GAGTTCAGG	-3.56
IR	CAediting_280032	chr3_49424070_-	49424068:49424076	5SS	0+4i	GAGTTCAAG	-8.37	GAGTTCGAG	-12.61
IR	CAediting_280033	chr3_49424075_-	49424068:49424076	5SS	2+0i	GAGTTCAAG	-8.37	GGGTTCAAG	-15.39

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000145029.10.NICN1.

Correlation between RNA A-to-I editing and PSI for ENSG00000145029.10.NICN1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NICN1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BLCA.CAediting_280020.ENSG00000145029.NICN1.png
Soverview

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Protein coding region RNA A-to-I editings for NICN1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NICN1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_279937	chr3_49423487_-	ENSG00000145029.10	ENST00000615713	hsa-miR-3960	49423483	49423489	7mer-m8	49423482	49423501	151.00	-23.23
CAediting_279937	chr3_49423487_-	ENSG00000145029.10	ENST00000615713	hsa-miR-8072	49423483	49423489	7mer-m8	49423482	49423501	140.00	-18.30
CAediting_279937	chr3_49423487_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3960	49423483	49423489	7mer-m8	49423482	49423501	151.00	-23.23
CAediting_279937	chr3_49423487_-	ENSG00000145029.10	ENST00000423832	hsa-miR-8072	49423483	49423489	7mer-m8	49423482	49423501	140.00	-18.30
CAediting_279938	chr3_49423491_-	ENSG00000145029.10	ENST00000615713	hsa-miR-663b	49423486	49423491	6mer	49423485	49423502	150.00	-30.90
CAediting_279938	chr3_49423491_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4641	49423489	49423495	7mer-m8	49423488	49423512	156.00	-19.50
CAediting_279938	chr3_49423491_-	ENSG00000145029.10	ENST00000423832	hsa-miR-663b	49423486	49423492	7mer-m8	49423485	49423502	150.00	-30.90
CAediting_279938	chr3_49423491_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6872-3p	49423491	49423497	7mer-m8	49423490	49423510	147.00	-25.39
CAediting_279940	chr3_49423500_-	ENSG00000145029.10	ENST00000423832	hsa-miR-106a-3p	49423498	49423503	6mer	49423497	49423518	141.00	-21.13
CAediting_279942	chr3_49423512_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6813-3p	49423510	49423516	7mer-m8	49423509	49423529	140.00	-12.94
CAediting_279943	chr3_49423513_-	ENSG00000145029.10	ENST00000423832	hsa-miR-1299	49423512	49423518	7mer-m8	49423511	49423532	152.00	-17.29
CAediting_279943	chr3_49423513_-	ENSG00000145029.10	ENST00000423832	hsa-miR-514a-5p	49423510	49423516	7mer-m8	49423509	49423529	154.00	-17.61
CAediting_279943	chr3_49423513_-	ENSG00000145029.10	ENST00000423832	hsa-miR-514a-5p	49423510	49423516	7mer-m8	49423509	49423529	154.00	-17.61
CAediting_279943	chr3_49423513_-	ENSG00000145029.10	ENST00000423832	hsa-miR-514a-5p	49423510	49423516	7mer-m8	49423509	49423529	154.00	-17.61
CAediting_279943	chr3_49423513_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518c-5p	49423511	49423517	7mer-m8	49423510	49423535	154.00	-21.04
CAediting_279944	chr3_49423514_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6125	49423513	49423520	8mer-1a	49423513	49423534	156.00	-30.61
CAediting_280035	chr3_49424083_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4726-3p	49424082	49424088	7mer-m8	49424081	49424104	159.00	-25.35
CAediting_280037	chr3_49424097_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4707-3p	49424094	49424100	7mer-m8	49424093	49424118	150.00	-27.20
CAediting_280038	chr3_49424101_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6749-5p	49424101	49424107	7mer-m8	49424100	49424124	147.00	-29.73
CAediting_280040	chr3_49424118_-	ENSG00000145029.10	ENST00000423832	hsa-miR-371a-3p	49424113	49424119	7mer-m8	49424112	49424134	145.00	-17.36
CAediting_280041	chr3_49424123_-	ENSG00000145029.10	ENST00000423832	hsa-miR-8052	49424118	49424124	7mer-1a	49424118	49424136	140.00	-24.15
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-513a-5p	49424123	49424129	7mer-m8	49424122	49424139	144.00	-16.68
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-513a-5p	49424123	49424129	7mer-m8	49424122	49424139	144.00	-16.68
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-638	49424118	49424124	7mer-1a	49424118	49424142	157.00	-32.92
CAediting_280043	chr3_49424132_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4634	49424128	49424134	7mer-m8	49424127	49424145	145.00	-20.24
CAediting_280049	chr3_49424390_-	ENSG00000145029.10	ENST00000615713	hsa-miR-624-3p	49424389	49424395	7mer-m8	49424388	49424408	153.00	-11.47
CAediting_280049	chr3_49424390_-	ENSG00000145029.10	ENST00000423832	hsa-miR-624-3p	49424389	49424395	7mer-m8	49424388	49424408	153.00	-11.47
CAediting_280049	chr3_49424390_-	ENSG00000145029.10	ENST00000436744	hsa-miR-624-3p	49424389	49424395	7mer-m8	49424388	49424408	153.00	-11.47
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000615713	hsa-miR-6746-3p	49423130	49423136	7mer-m8	49423129	49423150	162.00	-27.41
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000615713	hsa-miR-7843-3p	49423127	49423133	7mer-m8	49423126	49423148	155.00	-20.44
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6746-3p	49423130	49423136	7mer-m8	49423129	49423150	162.00	-27.41
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000423832	hsa-miR-7843-3p	49423127	49423133	7mer-m8	49423126	49423148	155.00	-20.44
CAediting_279936	chr3_49423462_-	ENSG00000145029.10	ENST00000615713	hsa-miR-875-3p	49423462	49423468	7mer-m8	49423461	49423481	143.00	-17.55
CAediting_279936	chr3_49423462_-	ENSG00000145029.10	ENST00000423832	hsa-miR-875-3p	49423462	49423468	7mer-m8	49423461	49423481	143.00	-17.55
CAediting_280033	chr3_49424075_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4732-3p	49424075	49424081	7mer-m8	49424075	49424094	155.00	-22.06
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518a-3p	49424111	49424117	7mer-m8	49424110	49424131	145.00	-17.15
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518a-3p	49424111	49424117	7mer-m8	49424110	49424131	145.00	-17.15
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518b	49424111	49424117	7mer-m8	49424110	49424130	146.00	-21.79
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518c-3p	49424111	49424117	7mer-m8	49424110	49424131	146.00	-18.98
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518d-3p	49424111	49424117	7mer-m8	49424110	49424130	145.00	-17.84
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518e-3p	49424112	49424118	7mer-m8	49424111	49424132	144.00	-18.65
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-518f-3p	49424111	49424117	7mer-m8	49424110	49424130	145.00	-17.48
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-526a-3p	49424111	49424117	7mer-m8	49424110	49424130	146.00	-17.71
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000615713	hsa-miR-1251-3p	49424184	49424190	7mer-m8	49424183	49424205	157.00	-16.60
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000423832	hsa-miR-1251-3p	49424184	49424190	7mer-m8	49424183	49424205	157.00	-16.60
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000436744	hsa-miR-1251-3p	49424184	49424190	7mer-m8	49424183	49424205	157.00	-16.60

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000615713	hsa-miR-19b-1-5p	49424184	49424190	7mer-m8	49424183	49424208	148	-18.76
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000615713	hsa-miR-19b-2-5p	49424184	49424190	7mer-m8	49424183	49424205	145	-11.06
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000615713	hsa-miR-29b-1-5p	49424181	49424187	7mer-m8	49424180	49424202	141	-12.69
CAediting_280047	chr3_49424174_-	ENSG00000145029.10	ENST00000615713	hsa-miR-3934-3p	49424171	49424178	8mer-1a	49424171	49424192	142	-21.52
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000615713	hsa-miR-6788-3p	49423132	49423138	7mer-m8	49423131	49423152	148	-17.93
CAediting_280041	chr3_49424123_-	ENSG00000145029.10	ENST00000423832	hsa-miR-10399-5p	49424122	49424128	7mer-m8	49424121	49424142	144	-10.39
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-10399-5p	49424122	49424128	7mer-m8	49424121	49424142	144	-10.39
CAediting_280036	chr3_49424088_-	ENSG00000145029.10	ENST00000423832	hsa-miR-125a-3p	49424083	49424090	8mer-1a	49424083	49424104	148	-21.28
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000423832	hsa-miR-19b-1-5p	49424184	49424190	7mer-m8	49424183	49424208	148	-18.76
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000423832	hsa-miR-19b-2-5p	49424184	49424190	7mer-m8	49424183	49424205	145	-11.06
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000423832	hsa-miR-29b-1-5p	49424181	49424187	7mer-m8	49424180	49424202	141	-12.69
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-302a-3p	49424112	49424118	7mer-m8	49424111	49424132	143	-14.98
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-302b-3p	49424112	49424118	7mer-m8	49424111	49424133	141	-9.83
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-302c-3p	49424112	49424118	7mer-m8	49424111	49424131	145	-11.96
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-302d-3p	49424112	49424118	7mer-m8	49424111	49424138	148	-13.74
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-302e	49424112	49424118	7mer-m8	49424111	49424127	141	-8.62
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3130-3p	49424139	49424145	7mer-m8	49424138	49424157	144	-19.42
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3130-3p	49424139	49424145	7mer-m8	49424138	49424157	144	-19.42
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-324-3p	49424136	49424142	7mer-m8	49424135	49424156	149	-23.18
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3609	49424111	49424116	6mer	49424110	49424132	140	-19
CAediting_280045	chr3_49424147_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3620-3p	49424142	49424148	7mer-m8	49424141	49424162	147	-19.63
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-372-3p	49424112	49424118	7mer-m8	49424111	49424138	155	-20.46
CAediting_280047	chr3_49424174_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3934-3p	49424171	49424178	8mer-1a	49424171	49424192	142	-21.52
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-4252	49424135	49424141	7mer-m8	49424134	49424153	146	-17.98
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-500a-3p	49424140	49424145	6mer	49424139	49424160	141	-15.51
CAediting_280040	chr3_49424118_-	ENSG00000145029.10	ENST00000423832	hsa-miR-5089-5p	49424118	49424124	7mer-m8	49424117	49424139	148	-14.13
CAediting_280041	chr3_49424123_-	ENSG00000145029.10	ENST00000423832	hsa-miR-5089-5p	49424118	49424124	7mer-m8	49424117	49424139	148	-14.13
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-512-3p	49424113	49424119	7mer-m8	49424112	49424133	149	-15.51
CAediting_280040	chr3_49424118_-	ENSG00000145029.10	ENST00000423832	hsa-miR-512-3p	49424113	49424119	7mer-m8	49424112	49424133	149	-15.51
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-512-3p	49424113	49424119	7mer-m8	49424112	49424133	149	-15.51
CAediting_280040	chr3_49424118_-	ENSG00000145029.10	ENST00000423832	hsa-miR-512-3p	49424113	49424119	7mer-m8	49424112	49424133	149	-15.51
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-519d-3p	49424111	49424117	7mer-m8	49424110	49424130	146	-14.53
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520a-3p	49424112	49424118	7mer-m8	49424111	49424132	140	-11.03
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520b-3p	49424112	49424118	7mer-m8	49424111	49424130	141	-16.52
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520c-3p	49424112	49424118	7mer-m8	49424111	49424131	146	-16.52
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520d-3p	49424112	49424118	7mer-m8	49424111	49424132	140	-15.12
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520e-3p	49424112	49424118	7mer-m8	49424111	49424131	140	-13.32
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520g-3p	49424110	49424116	7mer-m8	49424109	49424131	151	-16.77
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-520h	49424110	49424116	7mer-m8	49424109	49424130	150	-15.08
CAediting_280039	chr3_49424115_-	ENSG00000145029.10	ENST00000423832	hsa-miR-526b-3p	49424111	49424117	7mer-m8	49424110	49424130	146	-16.66
CAediting_280041	chr3_49424123_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6504-3p	49424122	49424128	7mer-m8	49424121	49424142	152	-15.11
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6504-3p	49424122	49424128	7mer-m8	49424121	49424142	152	-15.11
CAediting_280040	chr3_49424118_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6506-5p	49424117	49424123	7mer-m8	49424116	49424138	144	-13.78
CAediting_280045	chr3_49424147_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6747-3p	49424145	49424151	7mer-m8	49424144	49424164	140	-21.18
CAediting_280037	chr3_49424097_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6747-3p	49424095	49424101	7mer-m8	49424094	49424115	146	-21.53
CAediting_280045	chr3_49424147_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6752-3p	49424144	49424150	7mer-m8	49424143	49424163	140	-21.92
CAediting_280044	chr3_49424140_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6807-3p	49424138	49424143	6mer	49424137	49424158	152	-29.57
CAediting_280043	chr3_49424132_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6807-5p	49424132	49424138	7mer-m8	49424131	49424152	149	-20.37
CAediting_280037	chr3_49424097_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6894-3p	49424097	49424102	6mer	49424092	49424111	141	-26.89
CAediting_280042	chr3_49424124_-	ENSG00000145029.10	ENST00000423832	hsa-miR-7151-3p	49424123	49424130	8mer-1a	49424123	49424143	144	-16.51
CAediting_279945	chr3_49423535_-	ENSG00000145029.10	ENST00000423832	hsa-miR-1288-5p	49423531	49423537	7mer-m8	49423530	49423549	144	-17.17
CAediting_279946	chr3_49423540_-	ENSG00000145029.10	ENST00000423832	hsa-miR-3622a-3p	49423535	49423542	8mer-1a	49423535	49423556	145	-14.9
CAediting_279939	chr3_49423494_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6514-3p	49423494	49423500	7mer-m8	49423493	49423513	155	-17.54
CAediting_279934	chr3_49423132_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6788-3p	49423132	49423138	7mer-m8	49423131	49423152	148	-17.93
CAediting_279938	chr3_49423491_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6847-3p	49423489	49423495	7mer-m8	49423488	49423510	153	-22.19
CAediting_279939	chr3_49423494_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6847-3p	49423489	49423495	7mer-m8	49423488	49423510	153	-22.19
CAediting_279946	chr3_49423540_-	ENSG00000145029.10	ENST00000423832	hsa-miR-7162-3p	49423539	49423545	7mer-m8	49423538	49423556	140	-15.16
CAediting_279941	chr3_49423503_-	ENSG00000145029.10	ENST00000423832	hsa-miR-7977	49423503	49423509	7mer-m8	49423502	49423519	140	-13.07
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000436744	hsa-miR-19b-1-5p	49424184	49424190	7mer-m8	49424183	49424208	148	-18.76
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000436744	hsa-miR-19b-2-5p	49424184	49424190	7mer-m8	49424183	49424205	145	-11.06
CAediting_280048	chr3_49424185_-	ENSG00000145029.10	ENST00000436744	hsa-miR-29b-1-5p	49424181	49424187	7mer-m8	49424180	49424202	141	-12.69

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000145029.10	ENST00000615713	hsa-miR-605-3p	49424549	49424555	7mer-m8	49424548	49424569	167	-23.55
CAediting_748296	chr10_51299626_+	ENSG00000145029.10	ENST00000423832	hsa-miR-605-3p	49424549	49424555	7mer-m8	49424548	49424569	167	-23.55
CAediting_748296	chr10_51299626_+	ENSG00000145029.10	ENST00000436744	hsa-miR-605-3p	49424549	49424555	7mer-m8	49424548	49424569	167	-23.55
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000615713	hsa-miR-548aa	49424254	49424260	7mer-m8	49424253	49424276	147	-16.44
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000615713	hsa-miR-4423-3p	49424793	49424799	7mer-m8	49424792	49424813	162	-18.98
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000615713	hsa-miR-4423-3p	49424214	49424220	7mer-m8	49424213	49424233	140	-16.97
CAediting_1399425	chr20_1392958_-	ENSG00000145029.10	ENST00000615713	hsa-miR-6869-5p	49424595	49424602	8mer-1a	49424595	49424616	143	-15.59
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000615713	hsa-miR-589-3p	49424634	49424640	7mer-m8	49424633	49424661	148	-23.98
CAediting_1229415	chr17_67471547_+	ENSG00000145029.10	ENST00000615713	hsa-miR-548aa	49423282	49423288	7mer-m8	49423281	49423306	143	-9.96
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000423832	hsa-miR-548aa	49424254	49424260	7mer-m8	49424253	49424276	147	-16.44
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000423832	hsa-miR-4423-3p	49424793	49424799	7mer-m8	49424792	49424813	162	-18.98
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000423832	hsa-miR-4423-3p	49424214	49424220	7mer-m8	49424213	49424233	140	-16.97
CAediting_1399425	chr20_1392958_-	ENSG00000145029.10	ENST00000423832	hsa-miR-6869-5p	49424595	49424602	8mer-1a	49424595	49424616	143	-15.59
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000423832	hsa-miR-589-3p	49424634	49424640	7mer-m8	49424633	49424661	148	-23.98
CAediting_1229415	chr17_67471547_+	ENSG00000145029.10	ENST00000423832	hsa-miR-548aa	49423282	49423288	7mer-m8	49423281	49423306	143	-9.96
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000436744	hsa-miR-548aa	49424254	49424260	7mer-m8	49424253	49424276	147	-16.44
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000436744	hsa-miR-4423-3p	49424793	49424799	7mer-m8	49424792	49424813	162	-18.98
CAediting_77128	chr1_85133844_+	ENSG00000145029.10	ENST00000436744	hsa-miR-4423-3p	49424214	49424220	7mer-m8	49424213	49424233	140	-16.97
CAediting_1399425	chr20_1392958_-	ENSG00000145029.10	ENST00000436744	hsa-miR-6869-5p	49424595	49424602	8mer-1a	49424595	49424616	143	-15.59
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000436744	hsa-miR-589-3p	49424634	49424640	7mer-m8	49424633	49424661	148	-23.98
CAediting_1524209	chrX_134546392_-	ENSG00000145029.10	ENST00000615713	hsa-miR-503-5p	49424304	49424309	6mer	49424303	49424324	154	-23.42
CAediting_1524209	chrX_134546392_-	ENSG00000145029.10	ENST00000423832	hsa-miR-503-5p	49424304	49424309	6mer	49424303	49424324	154	-23.42
CAediting_1524209	chrX_134546392_-	ENSG00000145029.10	ENST00000436744	hsa-miR-503-5p	49424304	49424309	6mer	49424303	49424324	154	-23.42

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000615713	hsa-miR-548aa	49424361	49424367	7mer-m8	49424360	49424384	147	-10.58
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000615713	hsa-miR-589-3p	49424716	49424722	7mer-m8	49424715	49424740	152	-18.33
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000423832	hsa-miR-548aa	49424361	49424367	7mer-m8	49424360	49424384	147	-10.58
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000423832	hsa-miR-589-3p	49424716	49424722	7mer-m8	49424715	49424740	152	-18.33
CAediting_1229413	chr17_67471544_+	ENSG00000145029.10	ENST00000436744	hsa-miR-548aa	49424361	49424367	7mer-m8	49424360	49424384	147	-10.58
CAediting_524911	chr7_5495852_-	ENSG00000145029.10	ENST00000436744	hsa-miR-589-3p	49424716	49424722	7mer-m8	49424715	49424740	152	-18.33

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for NICN1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000273598.6	protein_coding
ENST00000423832.4	nonsense_mediated_decay
ENST00000615713.3	protein_coding
ENST00000497742.5	retained_intron
ENST00000436744.2	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_279934	ENST00000273598.6	chr3_49423132_-	-1217.50	-1217.50	-1236.80
CAediting_279935	ENST00000273598.6	chr3_49423456_-	-1217.50	-1217.50	-1236.80
CAediting_279936	ENST00000273598.6	chr3_49423462_-	-1221.50	-1217.50	-1236.80
CAediting_279937	ENST00000273598.6	chr3_49423487_-	-1217.10	-1217.50	-1236.80
CAediting_279938	ENST00000273598.6	chr3_49423491_-	-1216.60	-1217.50	-1236.80
CAediting_279939	ENST00000273598.6	chr3_49423494_-	-1223.30	-1217.50	-1236.80
CAediting_279940	ENST00000273598.6	chr3_49423500_-	-1217.50	-1217.50	-1236.80
CAediting_279941	ENST00000273598.6	chr3_49423503_-	-1216.90	-1217.50	-1236.80
CAediting_279942	ENST00000273598.6	chr3_49423512_-	-1217.20	-1217.50	-1236.80
CAediting_279943	ENST00000273598.6	chr3_49423513_-	-1217.60	-1217.50	-1236.80
CAediting_279944	ENST00000273598.6	chr3_49423514_-	-1217.20	-1217.50	-1236.80
CAediting_279945	ENST00000273598.6	chr3_49423535_-	-1216.90	-1217.50	-1236.80
CAediting_279946	ENST00000273598.6	chr3_49423540_-	-1216.80	-1217.50	-1236.80
CAediting_279947	ENST00000273598.6	chr3_49423545_-	-1216.90	-1217.50	-1236.80
CAediting_279948	ENST00000273598.6	chr3_49423550_-	-1218.50	-1217.50	-1236.80
CAediting_279949	ENST00000273598.6	chr3_49423552_-	-1217.50	-1217.50	-1236.80
CAediting_279950	ENST00000273598.6	chr3_49423553_-	-1217.50	-1217.50	-1236.80
CAediting_279951	ENST00000273598.6	chr3_49423554_-	-1220.60	-1217.50	-1236.80
CAediting_279952	ENST00000273598.6	chr3_49423565_-	-1216.80	-1217.50	-1236.80
CAediting_279953	ENST00000273598.6	chr3_49423587_-	-1213.90	-1217.50	-1236.80
CAediting_279954	ENST00000273598.6	chr3_49423589_-	-1216.60	-1217.50	-1236.80
CAediting_279955	ENST00000273598.6	chr3_49423591_-	-1217.20	-1217.50	-1236.80
CAediting_279956	ENST00000273598.6	chr3_49423594_-	-1217.20	-1217.50	-1236.80
CAediting_279957	ENST00000273598.6	chr3_49423600_-	-1217.50	-1217.50	-1236.80
CAediting_279958	ENST00000273598.6	chr3_49423608_-	-1217.60	-1217.50	-1236.80
CAediting_279959	ENST00000273598.6	chr3_49423632_-	-1216.80	-1217.50	-1236.80
CAediting_279960	ENST00000273598.6	chr3_49423644_-	-1217.20	-1217.50	-1236.80
CAediting_279961	ENST00000273598.6	chr3_49423656_-	-1216.80	-1217.50	-1236.80
CAediting_279962	ENST00000273598.6	chr3_49423669_-	-1217.40	-1217.50	-1236.80
CAediting_279963	ENST00000273598.6	chr3_49423670_-	-1221.40	-1217.50	-1236.80
CAediting_279964	ENST00000273598.6	chr3_49423673_-	-1217.20	-1217.50	-1236.80
CAediting_279965	ENST00000273598.6	chr3_49423674_-	-1217.20	-1217.50	-1236.80
CAediting_279966	ENST00000273598.6	chr3_49423680_-	-1223.70	-1217.50	-1236.80
CAediting_279967	ENST00000273598.6	chr3_49423693_-	-1217.50	-1217.50	-1236.80
CAediting_279968	ENST00000273598.6	chr3_49423694_-	-1217.20	-1217.50	-1236.80
CAediting_279969	ENST00000273598.6	chr3_49423699_-	-1218.30	-1217.50	-1236.80
CAediting_279970	ENST00000273598.6	chr3_49423700_-	-1217.50	-1217.50	-1236.80
CAediting_279971	ENST00000273598.6	chr3_49423715_-	-1223.00	-1217.50	-1236.80
CAediting_279972	ENST00000273598.6	chr3_49423717_-	-1217.50	-1217.50	-1236.80
CAediting_279973	ENST00000273598.6	chr3_49423730_-	-1216.80	-1217.50	-1236.80
CAediting_279974	ENST00000273598.6	chr3_49423749_-	-1216.60	-1217.50	-1236.80
CAediting_279975	ENST00000273598.6	chr3_49423755_-	-1216.70	-1217.50	-1236.80
CAediting_279976	ENST00000273598.6	chr3_49423847_-	-1220.50	-1217.50	-1236.80
CAediting_279977	ENST00000273598.6	chr3_49423852_-	-1217.60	-1217.50	-1236.80
CAediting_279978	ENST00000273598.6	chr3_49423853_-	-1217.60	-1217.50	-1236.80
CAediting_279979	ENST00000273598.6	chr3_49423854_-	-1217.60	-1217.50	-1236.80
CAediting_279980	ENST00000273598.6	chr3_49423855_-	-1217.60	-1217.50	-1236.80
CAediting_279981	ENST00000273598.6	chr3_49423858_-	-1217.50	-1217.50	-1236.80
CAediting_279982	ENST00000273598.6	chr3_49423863_-	-1217.60	-1217.50	-1236.80
CAediting_279983	ENST00000273598.6	chr3_49423866_-	-1217.20	-1217.50	-1236.80
CAediting_279984	ENST00000273598.6	chr3_49423867_-	-1217.60	-1217.50	-1236.80
CAediting_279985	ENST00000273598.6	chr3_49423878_-	-1217.50	-1217.50	-1236.80
CAediting_279986	ENST00000273598.6	chr3_49423879_-	-1217.60	-1217.50	-1236.80
CAediting_279987	ENST00000273598.6	chr3_49423884_-	-1216.60	-1217.50	-1236.80
CAediting_279988	ENST00000273598.6	chr3_49423886_-	-1217.20	-1217.50	-1236.80
CAediting_279989	ENST00000273598.6	chr3_49423887_-	-1217.90	-1217.50	-1236.80
CAediting_279990	ENST00000273598.6	chr3_49423889_-	-1217.20	-1217.50	-1236.80
CAediting_279991	ENST00000273598.6	chr3_49423890_-	-1217.20	-1217.50	-1236.80
CAediting_279992	ENST00000273598.6	chr3_49423899_-	-1216.80	-1217.50	-1236.80
CAediting_279993	ENST00000273598.6	chr3_49423904_-	-1217.10	-1217.50	-1236.80
CAediting_279994	ENST00000273598.6	chr3_49423914_-	-1220.30	-1217.50	-1236.80
CAediting_279995	ENST00000273598.6	chr3_49423917_-	-1216.90	-1217.50	-1236.80
CAediting_279996	ENST00000273598.6	chr3_49423919_-	-1216.70	-1217.50	-1236.80
CAediting_279997	ENST00000273598.6	chr3_49423938_-	-1224.10	-1217.50	-1236.80
CAediting_279998	ENST00000273598.6	chr3_49423947_-	-1217.00	-1217.50	-1236.80
CAediting_279999	ENST00000273598.6	chr3_49423955_-	-1217.50	-1217.50	-1236.80
CAediting_280000	ENST00000273598.6	chr3_49423956_-	-1217.00	-1217.50	-1236.80
CAediting_280001	ENST00000273598.6	chr3_49423958_-	-1216.60	-1217.50	-1236.80
CAediting_280002	ENST00000273598.6	chr3_49423961_-	-1216.80	-1217.50	-1236.80
CAediting_280003	ENST00000273598.6	chr3_49423965_-	-1216.60	-1217.50	-1236.80
CAediting_280004	ENST00000273598.6	chr3_49423971_-	-1216.60	-1217.50	-1236.80
CAediting_280005	ENST00000273598.6	chr3_49423978_-	-1217.50	-1217.50	-1236.80
CAediting_280006	ENST00000273598.6	chr3_49423982_-	-1216.80	-1217.50	-1236.80
CAediting_280007	ENST00000273598.6	chr3_49423987_-	-1217.50	-1217.50	-1236.80
CAediting_280008	ENST00000273598.6	chr3_49423988_-	-1217.60	-1217.50	-1236.80
CAediting_280009	ENST00000273598.6	chr3_49424014_-	-1217.20	-1217.50	-1236.80
CAediting_280010	ENST00000273598.6	chr3_49424017_-	-1217.80	-1217.50	-1236.80
CAediting_280011	ENST00000273598.6	chr3_49424018_-	-1217.90	-1217.50	-1236.80
CAediting_280012	ENST00000273598.6	chr3_49424019_-	-1217.90	-1217.50	-1236.80
CAediting_280013	ENST00000273598.6	chr3_49424021_-	-1217.60	-1217.50	-1236.80
CAediting_280014	ENST00000273598.6	chr3_49424022_-	-1217.20	-1217.50	-1236.80
CAediting_280015	ENST00000273598.6	chr3_49424024_-	-1217.50	-1217.50	-1236.80
CAediting_280016	ENST00000273598.6	chr3_49424026_-	-1217.50	-1217.50	-1236.80
CAediting_280017	ENST00000273598.6	chr3_49424027_-	-1217.60	-1217.50	-1236.80
CAediting_280018	ENST00000273598.6	chr3_49424028_-	-1217.90	-1217.50	-1236.80
CAediting_280019	ENST00000273598.6	chr3_49424029_-	-1220.10	-1217.50	-1236.80
CAediting_280020	ENST00000273598.6	chr3_49424030_-	-1217.20	-1217.50	-1236.80
CAediting_280021	ENST00000273598.6	chr3_49424033_-	-1217.50	-1217.50	-1236.80
CAediting_280022	ENST00000273598.6	chr3_49424044_-	-1217.50	-1217.50	-1236.80
CAediting_280023	ENST00000273598.6	chr3_49424045_-	-1217.60	-1217.50	-1236.80
CAediting_280024	ENST00000273598.6	chr3_49424046_-	-1217.00	-1217.50	-1236.80
CAediting_280025	ENST00000273598.6	chr3_49424048_-	-1216.60	-1217.50	-1236.80
CAediting_280026	ENST00000273598.6	chr3_49424054_-	-1217.50	-1217.50	-1236.80
CAediting_280027	ENST00000273598.6	chr3_49424055_-	-1217.20	-1217.50	-1236.80
CAediting_280028	ENST00000273598.6	chr3_49424058_-	-1216.90	-1217.50	-1236.80
CAediting_280029	ENST00000273598.6	chr3_49424064_-	-1216.80	-1217.50	-1236.80
CAediting_280030	ENST00000273598.6	chr3_49424067_-	-1216.90	-1217.50	-1236.80
CAediting_280031	ENST00000273598.6	chr3_49424069_-	-1217.10	-1217.50	-1236.80
CAediting_280032	ENST00000273598.6	chr3_49424070_-	-1220.60	-1217.50	-1236.80
CAediting_280033	ENST00000273598.6	chr3_49424075_-	-1217.90	-1217.50	-1236.80
CAediting_280034	ENST00000273598.6	chr3_49424078_-	-1216.80	-1217.50	-1236.80
CAediting_280035	ENST00000273598.6	chr3_49424083_-	-1216.60	-1217.50	-1236.80
CAediting_280036	ENST00000273598.6	chr3_49424088_-	-1217.10	-1217.50	-1236.80
CAediting_280037	ENST00000273598.6	chr3_49424097_-	-1216.80	-1217.50	-1236.80
CAediting_280038	ENST00000273598.6	chr3_49424101_-	-1217.50	-1217.50	-1236.80
CAediting_280039	ENST00000273598.6	chr3_49424115_-	-1217.10	-1217.50	-1236.80
CAediting_280040	ENST00000273598.6	chr3_49424118_-	-1216.80	-1217.50	-1236.80
CAediting_280041	ENST00000273598.6	chr3_49424123_-	-1217.50	-1217.50	-1236.80
CAediting_280042	ENST00000273598.6	chr3_49424124_-	-1217.60	-1217.50	-1236.80
CAediting_280043	ENST00000273598.6	chr3_49424132_-	-1217.50	-1217.50	-1236.80
CAediting_280044	ENST00000273598.6	chr3_49424140_-	-1223.70	-1217.50	-1236.80
CAediting_280045	ENST00000273598.6	chr3_49424147_-	-1217.90	-1217.50	-1236.80
CAediting_280046	ENST00000273598.6	chr3_49424151_-	-1221.30	-1217.50	-1236.80
CAediting_280047	ENST00000273598.6	chr3_49424174_-	-1218.60	-1217.50	-1236.80
CAediting_280048	ENST00000273598.6	chr3_49424185_-	-1219.80	-1217.50	-1236.80
CAediting_280049	ENST00000273598.6	chr3_49424390_-	-1222.90	-1217.50	-1236.80
CAediting_279934	ENST00000423832.4	chr3_49423132_-	-847.20	-847.20	-869.30
CAediting_279935	ENST00000423832.4	chr3_49423456_-	-847.20	-847.20	-869.30
CAediting_279936	ENST00000423832.4	chr3_49423462_-	-851.20	-847.20	-869.30
CAediting_279937	ENST00000423832.4	chr3_49423487_-	-846.80	-847.20	-869.30
CAediting_279938	ENST00000423832.4	chr3_49423491_-	-846.30	-847.20	-869.30
CAediting_279939	ENST00000423832.4	chr3_49423494_-	-853.00	-847.20	-869.30
CAediting_279940	ENST00000423832.4	chr3_49423500_-	-847.20	-847.20	-869.30
CAediting_279941	ENST00000423832.4	chr3_49423503_-	-846.60	-847.20	-869.30
CAediting_279942	ENST00000423832.4	chr3_49423512_-	-846.90	-847.20	-869.30
CAediting_279943	ENST00000423832.4	chr3_49423513_-	-847.30	-847.20	-869.30
CAediting_279944	ENST00000423832.4	chr3_49423514_-	-846.90	-847.20	-869.30
CAediting_279945	ENST00000423832.4	chr3_49423535_-	-846.60	-847.20	-869.30
CAediting_279946	ENST00000423832.4	chr3_49423540_-	-846.50	-847.20	-869.30
CAediting_279947	ENST00000423832.4	chr3_49423545_-	-846.60	-847.20	-869.30
CAediting_279948	ENST00000423832.4	chr3_49423550_-	-847.20	-847.20	-869.30
CAediting_279949	ENST00000423832.4	chr3_49423552_-	-851.90	-847.20	-869.30
CAediting_279950	ENST00000423832.4	chr3_49423553_-	-850.60	-847.20	-869.30
CAediting_279951	ENST00000423832.4	chr3_49423554_-	-847.20	-847.20	-869.30
CAediting_280033	ENST00000423832.4	chr3_49424075_-	-849.30	-847.20	-869.30
CAediting_280034	ENST00000423832.4	chr3_49424078_-	-846.50	-847.20	-869.30
CAediting_280035	ENST00000423832.4	chr3_49424083_-	-846.30	-847.20	-869.30
CAediting_280036	ENST00000423832.4	chr3_49424088_-	-846.80	-847.20	-869.30
CAediting_280037	ENST00000423832.4	chr3_49424097_-	-846.50	-847.20	-869.30
CAediting_280038	ENST00000423832.4	chr3_49424101_-	-847.20	-847.20	-869.30
CAediting_280039	ENST00000423832.4	chr3_49424115_-	-846.80	-847.20	-869.30
CAediting_280040	ENST00000423832.4	chr3_49424118_-	-846.50	-847.20	-869.30
CAediting_280041	ENST00000423832.4	chr3_49424123_-	-847.20	-847.20	-869.30
CAediting_280042	ENST00000423832.4	chr3_49424124_-	-847.30	-847.20	-869.30
CAediting_280043	ENST00000423832.4	chr3_49424132_-	-847.20	-847.20	-869.30
CAediting_280044	ENST00000423832.4	chr3_49424140_-	-853.40	-847.20	-869.30
CAediting_280045	ENST00000423832.4	chr3_49424147_-	-847.60	-847.20	-869.30
CAediting_280046	ENST00000423832.4	chr3_49424151_-	-851.00	-847.20	-869.30
CAediting_280047	ENST00000423832.4	chr3_49424174_-	-848.30	-847.20	-869.30
CAediting_280048	ENST00000423832.4	chr3_49424185_-	-847.90	-847.20	-869.30
CAediting_280049	ENST00000423832.4	chr3_49424390_-	-852.60	-847.20	-869.30
CAediting_279934	ENST00000615713.3	chr3_49423132_-	-699.70	-699.70	-724.60
CAediting_279935	ENST00000615713.3	chr3_49423456_-	-701.80	-699.70	-724.60
CAediting_279936	ENST00000615713.3	chr3_49423462_-	-702.40	-699.70	-724.60
CAediting_279937	ENST00000615713.3	chr3_49423487_-	-699.90	-699.70	-724.60
CAediting_279938	ENST00000615713.3	chr3_49423491_-	-702.60	-699.70	-724.60
CAediting_279939	ENST00000615713.3	chr3_49423494_-	-700.60	-699.70	-724.60
CAediting_279940	ENST00000615713.3	chr3_49423500_-	-701.00	-699.70	-724.60
CAediting_279941	ENST00000615713.3	chr3_49423503_-	-702.00	-699.70	-724.60
CAediting_280047	ENST00000615713.3	chr3_49424174_-	-701.90	-699.70	-724.60
CAediting_280048	ENST00000615713.3	chr3_49424185_-	-703.20	-699.70	-724.60
CAediting_280049	ENST00000615713.3	chr3_49424390_-	-705.10	-699.70	-724.60
CAediting_280033	ENST00000497742.5	chr3_49424075_-	-670.20	-670.10	-688.70
CAediting_280034	ENST00000497742.5	chr3_49424078_-	-669.40	-670.10	-688.70
CAediting_280035	ENST00000497742.5	chr3_49424083_-	-674.90	-670.10	-688.70
CAediting_280036	ENST00000497742.5	chr3_49424088_-	-673.90	-670.10	-688.70
CAediting_280037	ENST00000497742.5	chr3_49424097_-	-672.50	-670.10	-688.70
CAediting_280038	ENST00000497742.5	chr3_49424101_-	-670.10	-670.10	-688.70
CAediting_280039	ENST00000497742.5	chr3_49424115_-	-670.10	-670.10	-688.70
CAediting_280040	ENST00000497742.5	chr3_49424118_-	-669.30	-670.10	-688.70
CAediting_280041	ENST00000497742.5	chr3_49424123_-	-670.10	-670.10	-688.70
CAediting_280042	ENST00000497742.5	chr3_49424124_-	-670.90	-670.10	-688.70
CAediting_280043	ENST00000497742.5	chr3_49424132_-	-670.70	-670.10	-688.70
CAediting_280044	ENST00000497742.5	chr3_49424140_-	-671.70	-670.10	-688.70
CAediting_280045	ENST00000497742.5	chr3_49424147_-	-669.60	-670.10	-688.70
CAediting_280046	ENST00000497742.5	chr3_49424151_-	-669.80	-670.10	-688.70
CAediting_280047	ENST00000497742.5	chr3_49424174_-	-672.50	-670.10	-688.70
CAediting_280048	ENST00000497742.5	chr3_49424185_-	-670.10	-670.10	-688.70
CAediting_280049	ENST00000497742.5	chr3_49424390_-	-675.50	-670.10	-688.70
CAediting_280048	ENST00000436744.2	chr3_49424185_-	-466.70	-463.30	-472.10
CAediting_280049	ENST00000436744.2	chr3_49424390_-	-468.70	-463.30	-472.10

Top

Relation with ADAR for NICN1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_279939	chr3_49423494_-	0.00248786727085349	0.322145522948543	0.0138441497913687	0.264531524264852	.	.
LGG	CAediting_279939	chr3_49423494_-	1.80424710666214e-20	0.443060620016341	6.86926084149453e-06	0.223851010277945	.	.
BRCA	CAediting_279939	chr3_49423494_-	7.40071876685374e-15	0.354096491467355	.	.	.	.
LIHC	CAediting_279939	chr3_49423494_-	0.00946654735451858	0.252132872765831	.	.	.	.
CESC	CAediting_279939	chr3_49423494_-	0.00762742337231275	0.333162177272886	.	.	0.0194471175966712	0.293769244013192
LUAD	CAediting_279939	chr3_49423494_-	1.27240442753297e-05	0.326962017821169	.	.	.	.
GBM	CAediting_279939	chr3_49423494_-	0.00534140060842555	0.235081311543805	.	.	.	.
PRAD	CAediting_279939	chr3_49423494_-	0.00364221950906182	0.1797167655865	0.0431058932710607	0.12554961030548	.	.
STAD	CAediting_279939	chr3_49423494_-	.	.	0.000988144377694804	0.277393349035524	.	.
THCA	CAediting_279939	chr3_49423494_-	0.000118225018778242	0.195705171161585	.	.	.	.
KIRC	CAediting_279939	chr3_49423494_-	.	.	0.0290985774030832	0.184493098975598	.	.
UCEC	CAediting_279939	chr3_49423494_-	1.24639234462086e-07	0.405579240360761	0.0028069808327852	0.236224092358329	.	.
KIRP	CAediting_279939	chr3_49423494_-	0.0278945439351937	0.226855257960815	.	.	.	.
ESCA	CAediting_279939	chr3_49423494_-	0.0342412540311149	0.244853260366194	0.00151649779080068	0.359904056181721	.	.
OV	CAediting_279939	chr3_49423494_-	4.94383216981016e-07	0.296131044411992	.	.	.	.
SKCM	CAediting_279939	chr3_49423494_-	1.22564319678334e-05	0.302326848493068	.	.	.	.
SARC	CAediting_279939	chr3_49423494_-	0.0256819755062829	0.264725410007338	3.50802761495302e-05	0.470227732763434	.	.
THYM	CAediting_279939	chr3_49423494_-	2.40759959681176e-05	0.528244054138335	.	.	.	.
BLCA	CAediting_279940	chr3_49423500_-	0.00271985139723181	0.365935708284565	0.00270273698033964	0.366153985314736	.	.
LGG	CAediting_279940	chr3_49423500_-	4.72858427446108e-18	0.413695082358827	7.66818355445102e-06	0.221076304933018	.	.
BRCA	CAediting_279940	chr3_49423500_-	3.94806435281704e-13	0.376017384907534	.	.	.	.
LIHC	CAediting_279940	chr3_49423500_-	0.00306437445803741	0.388781011232328	.	.	.	.
LUAD	CAediting_279940	chr3_49423500_-	0.000129923664441798	0.32816932976852	.	.	.	.
GBM	CAediting_279940	chr3_49423500_-	0.000224165562419808	0.295997989251812	.	.	.	.
PRAD	CAediting_279940	chr3_49423500_-	8.29549283094559e-06	0.278277794252454	.	.	.	.
STAD	CAediting_279940	chr3_49423500_-	.	.	0.00150710576858882	0.27351623734631	.	.
THCA	CAediting_279940	chr3_49423500_-	1.12680237008053e-11	0.340733661756986	.	.	.	.
KIRC	CAediting_279940	chr3_49423500_-	0.0234901963454863	0.250018820732658	0.00227273355952498	0.33250335645985	.	.
UCEC	CAediting_279940	chr3_49423500_-	1.02124114794461e-08	0.408658281234365	0.00667920788236259	0.200395673282127	.	.
KIRP	CAediting_279940	chr3_49423500_-	.	.	0.000125356026060256	0.343028904885967	.	.
ESCA	CAediting_279940	chr3_49423500_-	3.69095736473929e-05	0.457441688441911	0.000356984771461412	0.401483159802573	.	.
OV	CAediting_279940	chr3_49423500_-	3.18487764703656e-09	0.350515819097065	.	.	.	.
SKCM	CAediting_279940	chr3_49423500_-	1.2471779492521e-05	0.318468354788029	0.000635284330421752	0.251562594389519	.	.
SARC	CAediting_279940	chr3_49423500_-	.	.	0.0132193383619609	0.329247507873805	.	.
THYM	CAediting_279940	chr3_49423500_-	0.000126260994530676	0.478534074700252	.	.	0.00503316930775889	0.360513695539837
LGG	CAediting_279942	chr3_49423512_-	0.000209709622152544	0.205495094618694	.	.	.	.
BRCA	CAediting_279942	chr3_49423512_-	2.69396352103443e-05	0.338831472056164	.	.	.	.
GBM	CAediting_279942	chr3_49423512_-	2.45657109138588e-05	0.339311561837297	.	.	.	.
PRAD	CAediting_279942	chr3_49423512_-	0.0292714219976101	0.189805335802883	.	.	.	.
THCA	CAediting_279942	chr3_49423512_-	1.17297737603081e-08	0.316839175836583	.	.	.	.
UCEC	CAediting_279942	chr3_49423512_-	0.00251719276802954	0.241036732353616	.	.	0.0323915788318337	0.171962043332284
KIRP	CAediting_279942	chr3_49423512_-	.	.	0.0434035720989011	0.19123381756993	.	.
OV	CAediting_279942	chr3_49423512_-	6.85141018251017e-05	0.24297128510246	.	.	.	.
SKCM	CAediting_279942	chr3_49423512_-	3.40463545120853e-05	0.392789236489107	.	.	.	.
THYM	CAediting_279942	chr3_49423512_-	0.00299508865862725	0.411416743828597	.	.	2.13327130763323e-05	0.562382877207754
LGG	CAediting_279943	chr3_49423513_-	2.3868342950041e-06	0.245671190236426	.	.	.	.
BRCA	CAediting_279943	chr3_49423513_-	2.87140244805081e-05	0.307240128168226	.	.	.	.
LUAD	CAediting_279943	chr3_49423513_-	0.0410287713348943	0.241448465052311	.	.	.	.
GBM	CAediting_279943	chr3_49423513_-	0.000273186202836081	0.291181705184914	.	.	.	.
PRAD	CAediting_279943	chr3_49423513_-	0.0115095700048048	0.21151199419878	.	.	.	.
THCA	CAediting_279943	chr3_49423513_-	5.11881359496804e-10	0.333564701606607	.	.	.	.
UCEC	CAediting_279943	chr3_49423513_-	7.23549613820817e-07	0.356608288058503	.	.	.	.
KIRP	CAediting_279943	chr3_49423513_-	0.0483054400115302	0.178440397781966	0.0274615703599001	0.198849099616433	.	.
OV	CAediting_279943	chr3_49423513_-	3.43451030219592e-05	0.25063817443056	.	.	.	.
SKCM	CAediting_279943	chr3_49423513_-	8.0235250303499e-06	0.406247881375407	0.0120917716610473	0.235360369113766	.	.
THYM	CAediting_279943	chr3_49423513_-	0.00490655493640291	0.361495845516898	.	.	6.18792513725741e-05	0.497148845972455
THCA	CAediting_279946	chr3_49423540_-	0.0101502872498251	0.231942063701504	.	.	.	.
BRCA	CAediting_279949	chr3_49423552_-	0.00369214346530863	0.239658912037251	.	.	.	.
LUAD	CAediting_279949	chr3_49423552_-	0.00367205516301561	0.366497913131763	.	.	.	.
THCA	CAediting_279949	chr3_49423552_-	1.50929969318842e-06	0.324816036842067	.	.	.	.
BLCA	CAediting_279950	chr3_49423553_-	9.51583939350665e-05	0.376722508497794	.	.	.	.
LGG	CAediting_279950	chr3_49423553_-	0.000117198792791281	0.176189909672698	.	.	.	.
BRCA	CAediting_279950	chr3_49423553_-	1.33079352286456e-08	0.299097686075568	.	.	.	.
CESC	CAediting_279950	chr3_49423553_-	0.0309152768737725	0.305596668260104	.	.	.	.
LUAD	CAediting_279950	chr3_49423553_-	0.00917411961048784	0.20227422553084	.	.	.	.
GBM	CAediting_279950	chr3_49423553_-	8.86160249090374e-05	0.34734453665855	.	.	.	.
PRAD	CAediting_279950	chr3_49423553_-	0.0386988558749085	0.117109082047333	.	.	.	.
THCA	CAediting_279950	chr3_49423553_-	1.05869296242452e-05	0.207352037920338	.	.	.	.
KIRC	CAediting_279950	chr3_49423553_-	0.000140491348022205	0.332778350689889	0.00738625723201575	0.237596428890965	.	.
UCEC	CAediting_279950	chr3_49423553_-	0.00438445651057155	0.253207621145273	.	.	.	.
OV	CAediting_279950	chr3_49423553_-	0.000134747029859161	0.302843619075227	.	.	.	.
SKCM	CAediting_279950	chr3_49423553_-	1.29035474478042e-08	0.356822908594688	.	.	.	.
THYM	CAediting_279950	chr3_49423553_-	0.0282758574678861	0.248460760421991	.	.	9.35006698448846e-06	0.478555564213318
BLCA	CAediting_279951	chr3_49423554_-	8.09777593079233e-07	0.457712447728478	.	.	.	.
LGG	CAediting_279951	chr3_49423554_-	0.0229631142834604	0.103356093946656	.	.	.	.
BRCA	CAediting_279951	chr3_49423554_-	0.000297991476929578	0.196136645213507	.	.	.	.
CESC	CAediting_279951	chr3_49423554_-	0.0204374603687483	0.311909998788583	.	.	.	.
LUAD	CAediting_279951	chr3_49423554_-	0.00278405419042731	0.23210628403578	.	.	.	.
PRAD	CAediting_279951	chr3_49423554_-	0.026407355487097	0.126924303544598	.	.	.	.
THCA	CAediting_279951	chr3_49423554_-	2.26840479463128e-05	0.198067686010398	.	.	.	.
KIRC	CAediting_279951	chr3_49423554_-	0.0250060704667811	0.202891864021125	.	.	.	.
UCEC	CAediting_279951	chr3_49423554_-	0.00788720313723257	0.230322977104553	.	.	.	.
OV	CAediting_279951	chr3_49423554_-	0.00103666540578771	0.262684243284985	.	.	.	.
SKCM	CAediting_279951	chr3_49423554_-	4.00151788009069e-09	0.368306318370163	.	.	.	.
THYM	CAediting_279951	chr3_49423554_-	.	.	0.0155489660933239	0.264813027629235	2.92787996627315e-07	0.527855910039089
BRCA	CAediting_279955	chr3_49423591_-	0.0328645929083886	0.122020677591562	.	.	.	.
THCA	CAediting_279955	chr3_49423591_-	0.0147375492281702	0.128448048724741	.	.	.	.
THYM	CAediting_279955	chr3_49423591_-	0.0363290486231108	0.296826476014361	.	.	.	.
LGG	CAediting_279956	chr3_49423594_-	.	.	0.000809529915220215	0.252354084780094	.	.
BRCA	CAediting_279956	chr3_49423594_-	.	.	0.00161108415292271	0.224410039382796	.	.
LUAD	CAediting_279956	chr3_49423594_-	.	.	0.0245608583623741	0.297597517210543	0.00677985707840426	0.354728404636239
PRAD	CAediting_279956	chr3_49423594_-	.	.	0.00503960802747246	0.25656912934291	.	.
KIRP	CAediting_279956	chr3_49423594_-	.	.	1.57006162470403e-06	0.620043417646833	.	.
SKCM	CAediting_279956	chr3_49423594_-	.	.	4.54417346477089e-06	0.501645062375153	.	.
LGG	CAediting_279957	chr3_49423600_-	1.40880366139529e-08	0.274566472946765	.	.	.	.
BRCA	CAediting_279957	chr3_49423600_-	1.18212145410529e-13	0.322699203469172	.	.	.	.
LIHC	CAediting_279957	chr3_49423600_-	0.00026074836041552	0.40728698596529	.	.	.	.
LUAD	CAediting_279957	chr3_49423600_-	1.73678015092236e-05	0.332541810575375	.	.	.	.
PRAD	CAediting_279957	chr3_49423600_-	9.83447903423213e-07	0.295353969963128	.	.	.	.
THCA	CAediting_279957	chr3_49423600_-	2.78021386507177e-09	0.278537881407259	.	.	.	.
UCEC	CAediting_279957	chr3_49423600_-	0.00537705107732063	0.279148411992298	.	.	.	.
KIRP	CAediting_279957	chr3_49423600_-	0.0279513601169704	0.168117741866122	.	.	.	.
OV	CAediting_279957	chr3_49423600_-	2.171807291604e-05	0.325985066783355	.	.	.	.
SKCM	CAediting_279957	chr3_49423600_-	3.62397914833451e-07	0.341683946587301	.	.	.	.
THYM	CAediting_279957	chr3_49423600_-	0.011107575494128	0.303977604077846	.	.	0.000802551049719604	0.394248187532242
LGG	CAediting_279958	chr3_49423608_-	0.00429395969603632	0.286086598167537	.	.	.	.
BRCA	CAediting_279958	chr3_49423608_-	0.000672792828690953	0.237879381547393	.	.	.	.
GBM	CAediting_279958	chr3_49423608_-	0.000727810333643468	0.414664109537504	.	.	.	.
PRAD	CAediting_279958	chr3_49423608_-	0.000196509193599403	0.422496292948216	0.0263394830199155	0.259967778341175	.	.
THCA	CAediting_279958	chr3_49423608_-	4.65927510619323e-09	0.409009168324729	0.0112223590213917	0.183603885124951	.	.
SKCM	CAediting_279958	chr3_49423608_-	0.00103017851682112	0.416607274895472	.	.	.	.
THCA	CAediting_279960	chr3_49423644_-	0.0421777456248756	0.258885420270616	.	.	.	.
LGG	CAediting_279961	chr3_49423656_-	0.00190591072994275	0.141504245524215	.	.	.	.
BRCA	CAediting_279961	chr3_49423656_-	1.10756347893696e-07	0.215148954773212	.	.	.	.
LIHC	CAediting_279961	chr3_49423656_-	0.0138143264885288	0.267720629216869	.	.	.	.
CESC	CAediting_279961	chr3_49423656_-	0.0090276247375954	0.301556259532654	.	.	0.0321958100269009	0.249297451439108
LUAD	CAediting_279961	chr3_49423656_-	0.00707454862778331	0.178703122592326	.	.	.	.
COAD	CAediting_279961	chr3_49423656_-	.	.	.	.	0.0215718325990321	0.306540404133449
THCA	CAediting_279961	chr3_49423656_-	1.58077118666351e-06	0.220710028472782	.	.	.	.
KIRC	CAediting_279961	chr3_49423656_-	0.00697869141854561	0.173367835704945	0.00346376441053986	0.187604943276096	.	.
UCEC	CAediting_279961	chr3_49423656_-	0.0265399565773411	0.152358112035224	.	.	.	.
KIRP	CAediting_279961	chr3_49423656_-	0.0465085396326141	0.138203337507044	.	.	.	.
SKCM	CAediting_279961	chr3_49423656_-	5.4452726197522e-07	0.299801226371012	0.0084649529500907	0.160240684203433	.	.
SARC	CAediting_279961	chr3_49423656_-	0.0174721454828244	0.291721237062164	.	.	.	.
THYM	CAediting_279961	chr3_49423656_-	0.00118419277576844	0.37221333643556	0.0209215856517953	0.269915334624389	0.00806392839255886	0.307830958832868
LGG	CAediting_279962	chr3_49423669_-	.	.	0.0249183751601946	0.24037867579497	.	.
BRCA	CAediting_279963	chr3_49423670_-	0.00313601584286807	0.306421963108078	.	.	.	.
GBM	CAediting_279963	chr3_49423670_-	.	.	0.0166956971069718	0.313129845357766	.	.
BLCA	CAediting_279964	chr3_49423673_-	0.000360891117020251	0.442096833910361	.	.	.	.
LGG	CAediting_279964	chr3_49423673_-	3.12298489409817e-08	0.265352726506623	.	.	.	.
BRCA	CAediting_279964	chr3_49423673_-	6.32688215874743e-07	0.246281518870112	.	.	.	.
GBM	CAediting_279964	chr3_49423673_-	0.0217660701051846	0.181305836726614	.	.	.	.
THCA	CAediting_279964	chr3_49423673_-	4.78473337501947e-06	0.223976086497778	.	.	.	.
KIRC	CAediting_279964	chr3_49423673_-	0.00294958706448913	0.230079256598321	0.0441767712447603	0.156887049025303	.	.
UCEC	CAediting_279964	chr3_49423673_-	0.0231725597324592	0.215415411243951	.	.	.	.
KIRP	CAediting_279964	chr3_49423673_-	0.0479202305922655	0.163445352540838	.	.	.	.
SKCM	CAediting_279964	chr3_49423673_-	0.000281881050649203	0.296306372460317	.	.	.	.
LGG	CAediting_279965	chr3_49423674_-	0.0128870325981673	0.152593236038676	.	.	.	.
KIRP	CAediting_279965	chr3_49423674_-	.	.	.	.	0.00332448887753005	0.31317687734401
BLCA	CAediting_279966	chr3_49423680_-	0.000588514753631691	0.355343753088349	.	.	.	.
LGG	CAediting_279966	chr3_49423680_-	9.72792756818356e-07	0.218874028905158	0.013277598319771	0.111685784349923	.	.
BRCA	CAediting_279966	chr3_49423680_-	5.10598816738177e-08	0.240168519620482	.	.	.	.
LUAD	CAediting_279966	chr3_49423680_-	0.00610671426036452	0.217254743012572	.	.	.	.
GBM	CAediting_279966	chr3_49423680_-	0.000261749393303875	0.283110636509973	0.00929785273925492	0.203775516585206	.	.
PRAD	CAediting_279966	chr3_49423680_-	0.00403920394754914	0.173799317992793	0.000328200387322472	0.216208611779225	.	.
THCA	CAediting_279966	chr3_49423680_-	5.68917455721032e-07	0.231410019610324	.	.	.	.
KIRC	CAediting_279966	chr3_49423680_-	6.6869344363647e-05	0.273481081962411	.	.	.	.
UCEC	CAediting_279966	chr3_49423680_-	0.0021628326587377	0.25019782920129	0.00829474028330542	0.216252474352924	.	.
KIRP	CAediting_279966	chr3_49423680_-	0.0129850045861939	0.175393612931844	0.000111140059388582	0.269891669446813	.	.
OV	CAediting_279966	chr3_49423680_-	0.00249216974145512	0.237522282922403	.	.	.	.
SKCM	CAediting_279966	chr3_49423680_-	0.000887246929856959	0.230992967273352	0.000132770257218193	0.264390044270186	.	.
THYM	CAediting_279966	chr3_49423680_-	.	.	0.00277101797991296	0.338623875681386	.	.
LGG	CAediting_279967	chr3_49423693_-	0.00931838900386922	0.204345502712195	.	.	.	.
BRCA	CAediting_279967	chr3_49423693_-	5.64458540505137e-06	0.27577125063882	.	.	.	.
GBM	CAediting_279967	chr3_49423693_-	8.98175307570786e-05	0.351230754176494	.	.	.	.
BRCA	CAediting_279971	chr3_49423715_-	2.1600745294623e-05	0.443186141298609	.	.	.	.
GBM	CAediting_279971	chr3_49423715_-	0.00309386728390902	0.375713589609537	.	.	.	.
OV	CAediting_279971	chr3_49423715_-	3.66415016051776e-07	0.391436224355906	.	.	.	.
BRCA	CAediting_279985	chr3_49423878_-	1.92589692781346e-06	0.281039201918836	.	.	.	.
LUAD	CAediting_279985	chr3_49423878_-	0.019105846087205	0.290020177312238	.	.	.	.
PRAD	CAediting_279985	chr3_49423878_-	0.0432810610553997	0.257559294953033	.	.	.	.
OV	CAediting_279985	chr3_49423878_-	6.00736108007015e-06	0.35027122625983	.	.	.	.
BRCA	CAediting_279994	chr3_49423914_-	0.00415472629993916	0.222026951805391	.	.	.	.
LIHC	CAediting_279994	chr3_49423914_-	0.00479311509020233	0.320285259200583	.	.	.	.
OV	CAediting_279994	chr3_49423914_-	0.000397143789599635	0.340971363197299	.	.	.	.
BLCA	CAediting_279997	chr3_49423938_-	.	.	0.0142798120402243	0.278233673721531	.	.
LGG	CAediting_279997	chr3_49423938_-	0.0168006614394722	0.227576608238767	.	.	.	.
BRCA	CAediting_279997	chr3_49423938_-	1.42924308807375e-07	0.26556943238953	.	.	.	.
LIHC	CAediting_279997	chr3_49423938_-	0.0124724677325953	0.276472872867313	.	.	.	.
LUAD	CAediting_279997	chr3_49423938_-	0.0291139907479528	0.185808552517775	.	.	.	.
OV	CAediting_279997	chr3_49423938_-	0.000137284113870284	0.264473102490331	.	.	.	.
SKCM	CAediting_279997	chr3_49423938_-	0.00338318762060598	0.251439740907057	.	.	.	.
LGG	CAediting_279998	chr3_49423947_-	1.36227546001945e-05	0.237638435416729	.	.	.	.
BRCA	CAediting_279998	chr3_49423947_-	1.48508024313167e-08	0.228610469572796	.	.	.	.
CESC	CAediting_279998	chr3_49423947_-	0.00572116979291271	0.308206489695284	.	.	0.013044880814729	0.278204411808323
LUAD	CAediting_279998	chr3_49423947_-	0.0159903237735351	0.163386007574209	.	.	.	.
GBM	CAediting_279998	chr3_49423947_-	0.00342743229063853	0.250185470101169	.	.	.	.
PRAD	CAediting_279998	chr3_49423947_-	9.77880745965873e-06	0.271946739549236	.	.	.	.
THCA	CAediting_279998	chr3_49423947_-	0.00102647328936623	0.166695578903507	.	.	.	.
UCEC	CAediting_279998	chr3_49423947_-	0.010030071384613	0.214682449603806	.	.	.	.
SKCM	CAediting_279998	chr3_49423947_-	2.28974445903563e-07	0.329124230343243	.	.	.	.
SARC	CAediting_279998	chr3_49423947_-	0.0138923731769715	0.308512097231798	.	.	.	.
THYM	CAediting_279998	chr3_49423947_-	.	.	.	.	0.0316192998366542	0.295629894398708
BLCA	CAediting_279999	chr3_49423955_-	.	.	0.0267962946660312	0.301359238385695	.	.
LGG	CAediting_279999	chr3_49423955_-	.	.	3.8636520846986e-15	0.451083859393206	0.0211387674812422	0.139237574231658
BRCA	CAediting_279999	chr3_49423955_-	0.0275887705444792	0.115167615843637	0.00179235051448585	0.162690905855987	.	.
LUAD	CAediting_279999	chr3_49423955_-	0.0157720935157643	0.21137799289406	0.00994856575909005	0.22533256421903	.	.
GBM	CAediting_279999	chr3_49423955_-	.	.	0.0430145086348795	0.202798701908172	.	.
PRAD	CAediting_279999	chr3_49423955_-	.	.	6.31267754483689e-05	0.237998338407428	.	.
KIRC	CAediting_279999	chr3_49423955_-	.	.	0.00124679134516997	0.231300634416019	.	.
UCEC	CAediting_279999	chr3_49423955_-	.	.	1.54563317712155e-05	0.479465461330884	.	.
KIRP	CAediting_279999	chr3_49423955_-	.	.	3.46336752200586e-08	0.522319641035427	.	.
SKCM	CAediting_279999	chr3_49423955_-	.	.	2.96930592046867e-08	0.410503794563512	.	.
BRCA	CAediting_280001	chr3_49423958_-	0.0214164124233136	0.147533323990157	.	.	.	.
LUAD	CAediting_280001	chr3_49423958_-	0.0393232197726713	0.26035241782154	.	.	.	.
THCA	CAediting_280001	chr3_49423958_-	0.0230569567960434	0.159069130450806	.	.	.	.
LGG	CAediting_280002	chr3_49423961_-	.	.	0.00506941075646901	0.230009664638487	.	.
GBM	CAediting_280002	chr3_49423961_-	.	.	0.00463776621350835	0.304272048729695	.	.
PRAD	CAediting_280002	chr3_49423961_-	.	.	0.0364015198988063	0.152727120029651	.	.
STAD	CAediting_280002	chr3_49423961_-	.	.	5.19272811100961e-05	0.535236685497757	.	.
KIRC	CAediting_280002	chr3_49423961_-	.	.	0.0420394977719271	0.243716158079706	.	.
UCEC	CAediting_280002	chr3_49423961_-	.	.	1.95506814205686e-07	0.63933734907433	.	.
KIRP	CAediting_280002	chr3_49423961_-	.	.	1.20236673345233e-05	0.506894265153445	.	.
OV	CAediting_280002	chr3_49423961_-	.	.	0.00714165040282672	0.220275078631804	.	.
SKCM	CAediting_280002	chr3_49423961_-	.	.	2.72336089537474e-05	0.408312892497853	.	.
GBM	CAediting_280005	chr3_49423978_-	0.02403113256519	0.271501740720522	.	.	.	.
THCA	CAediting_280005	chr3_49423978_-	0.000349084788750435	0.46102652874085	.	.	.	.
THCA	CAediting_280007	chr3_49423987_-	0.00324381597537171	0.323265000271242	.	.	.	.
LGG	CAediting_280008	chr3_49423988_-	0.000154346165610866	0.505538237937018	.	.	.	.
BRCA	CAediting_280008	chr3_49423988_-	0.0100684113969666	0.297420487718998	.	.	.	.
GBM	CAediting_280008	chr3_49423988_-	0.0148034962911141	0.204886706519636	.	.	.	.
THCA	CAediting_280008	chr3_49423988_-	0.0150875253789051	0.259818958187369	.	.	.	.
LGG	CAediting_280015	chr3_49424024_-	0.000399081930720138	0.21475694299606	.	.	.	.
BRCA	CAediting_280015	chr3_49424024_-	6.31923956624951e-06	0.300454294883206	.	.	.	.
LUAD	CAediting_280015	chr3_49424024_-	0.0490424770694422	0.274350345865197	.	.	.	.
THCA	CAediting_280015	chr3_49424024_-	4.20718631373695e-05	0.238477630727954	.	.	.	.
SKCM	CAediting_280015	chr3_49424024_-	0.00427370072323397	0.300093307350561	.	.	0.0391130677723628	0.219109664382214
LGG	CAediting_280018	chr3_49424028_-	0.011403671268959	0.231220660563825	.	.	.	.
LGG	CAediting_280019	chr3_49424029_-	0.00178891826979463	0.221721107489288	.	.	.	.
BRCA	CAediting_280019	chr3_49424029_-	0.027401972439622	0.171226369228742	.	.	.	.
THCA	CAediting_280019	chr3_49424029_-	0.00195059468392148	0.215126118321917	.	.	.	.
LGG	CAediting_280020	chr3_49424030_-	0.0125549461276797	0.138116301880163	.	.	.	.
BRCA	CAediting_280020	chr3_49424030_-	2.81553578551844e-05	0.266264490695041	.	.	.	.
GBM	CAediting_280020	chr3_49424030_-	0.0260965054246491	0.27382534369877	.	.	.	.
OV	CAediting_280020	chr3_49424030_-	0.0241118430139127	0.315518400426468	.	.	.	.
SKCM	CAediting_280020	chr3_49424030_-	0.00210326631840362	0.296870907488894	.	.	.	.
LGG	CAediting_280021	chr3_49424033_-	0.0351566413617304	0.119121552090846	.	.	.	.
BRCA	CAediting_280021	chr3_49424033_-	0.0217150254467043	0.14689883040152	.	.	.	.
GBM	CAediting_280031	chr3_49424069_-	0.00094545896920571	0.384036520852227	.	.	.	.
GBM	CAediting_280032	chr3_49424070_-	0.00050055048154487	0.389781734682702	.	.	.	.
THCA	CAediting_280032	chr3_49424070_-	0.0410255469364503	0.20788542752029	.	.	.	.
GBM	CAediting_280038	chr3_49424101_-	0.0248747784478752	0.244701246944153	.	.	.	.
LGG	CAediting_280041	chr3_49424123_-	8.07158618977027e-05	0.284224363696276	.	.	.	.
BRCA	CAediting_280041	chr3_49424123_-	3.11215628032025e-08	0.324408186489999	.	.	.	.
LUAD	CAediting_280041	chr3_49424123_-	0.00148398179103912	0.333757104934667	.	.	.	.
THCA	CAediting_280041	chr3_49424123_-	0.00011414595570961	0.277697655125153	.	.	.	.
KIRC	CAediting_280041	chr3_49424123_-	.	.	0.015468926668817	0.266612061761716	.	.
UCEC	CAediting_280041	chr3_49424123_-	.	.	.	.	0.00104339905768726	0.441757791838973
SKCM	CAediting_280041	chr3_49424123_-	9.69229699063297e-05	0.337687742981176	.	.	.	.
BLCA	CAediting_280042	chr3_49424124_-	6.95815960105819e-05	0.398474070874757	.	.	.	.
LGG	CAediting_280042	chr3_49424124_-	4.83759704728272e-11	0.326140722539835	.	.	.	.
BRCA	CAediting_280042	chr3_49424124_-	1.15899752744824e-33	0.514052828050887	.	.	.	.
LIHC	CAediting_280042	chr3_49424124_-	0.028124375731448	0.221858583043653	.	.	.	.
CESC	CAediting_280042	chr3_49424124_-	0.000123955092775828	0.471777588147542	.	.	.	.
LUAD	CAediting_280042	chr3_49424124_-	2.70290215994438e-06	0.328742136752645	.	.	.	.
LUSC	CAediting_280042	chr3_49424124_-	0.0414497850469315	0.227116018684193	.	.	.	.
GBM	CAediting_280042	chr3_49424124_-	0.000117303408783868	0.327802016231222	.	.	.	.
PRAD	CAediting_280042	chr3_49424124_-	2.68131750463124e-05	0.253476491866984	.	.	.	.
THCA	CAediting_280042	chr3_49424124_-	4.3726048557733e-09	0.293110729880085	.	.	.	.
UCEC	CAediting_280042	chr3_49424124_-	7.92766123424209e-06	0.393666574679348	0.014486234509999	0.221796868803579	0.0057836478428751	0.249500226303411
KIRP	CAediting_280042	chr3_49424124_-	0.014110932948459	0.219058086411763	.	.	.	.
OV	CAediting_280042	chr3_49424124_-	0.00652872490072765	0.227268961045307	.	.	.	.
SKCM	CAediting_280042	chr3_49424124_-	3.85082938576178e-17	0.515366219944798	.	.	.	.
BLCA	CAediting_280044	chr3_49424140_-	5.85892889386801e-15	0.535299649061907	0.049279972408251	0.145565174993137	.	.
LGG	CAediting_280044	chr3_49424140_-	2.24234985778519e-14	0.325536234534311	.	.	.	.
BRCA	CAediting_280044	chr3_49424140_-	1.25273852807427e-47	0.494794797457378	.	.	.	.
LIHC	CAediting_280044	chr3_49424140_-	3.42041855126224e-07	0.387803345568585	.	.	.	.
CESC	CAediting_280044	chr3_49424140_-	1.08363679454785e-07	0.435021641233326	.	.	.	.
LUAD	CAediting_280044	chr3_49424140_-	1.02933752660009e-09	0.334285972597969	.	.	.	.
COAD	CAediting_280044	chr3_49424140_-	9.47366738060028e-08	0.431100805680902	.	.	.	.
LUSC	CAediting_280044	chr3_49424140_-	0.0194941882218203	0.180627992015353	.	.	0.0273171407314453	0.170805284608505
GBM	CAediting_280044	chr3_49424140_-	2.54862875037048e-06	0.360977575731737	.	.	.	.
PRAD	CAediting_280044	chr3_49424140_-	5.49029560994005e-15	0.359816284970986	.	.	.	.
HNSC	CAediting_280044	chr3_49424140_-	0.000935377669079594	0.302008581471874	.	.	.	.
STAD	CAediting_280044	chr3_49424140_-	0.0385300636358568	0.200354500230972	.	.	.	.
KICH	CAediting_280044	chr3_49424140_-	1.98806722084997e-05	0.520833999758805	.	.	.	.
THCA	CAediting_280044	chr3_49424140_-	9.17104284686471e-19	0.38467719957509	.	.	.	.
KIRC	CAediting_280044	chr3_49424140_-	3.3699560046951e-07	0.269742567404316	.	.	.	.
UCEC	CAediting_280044	chr3_49424140_-	5.17793998517489e-17	0.451971213371383	.	.	0.0137611045188991	0.139791038167285
KIRP	CAediting_280044	chr3_49424140_-	8.63866089769014e-06	0.276680330872576	.	.	.	.
OV	CAediting_280044	chr3_49424140_-	2.44807395307162e-08	0.366592440786789	.	.	.	.
PCPG	CAediting_280044	chr3_49424140_-	0.00469733716195145	0.303854037665057	.	.	.	.
SKCM	CAediting_280044	chr3_49424140_-	9.01389288884633e-24	0.495579935809115	.	.	.	.
READ	CAediting_280044	chr3_49424140_-	0.00477742438218334	0.371826032876161	.	.	.	.
THYM	CAediting_280044	chr3_49424140_-	6.22885107425003e-06	0.442880957343639	0.0179177056853451	0.241193910056899	5.21165252852937e-07	0.485894595165681
LGG	CAediting_280045	chr3_49424147_-	0.000167561050533674	0.360884719335166	.	.	.	.
BRCA	CAediting_280045	chr3_49424147_-	1.65121652595737e-05	0.21251109234298	.	.	.	.
LUAD	CAediting_280045	chr3_49424147_-	0.000618679880740413	0.321366156215945	.	.	.	.
LUSC	CAediting_280045	chr3_49424147_-	0.00566399984921839	0.371600163539326	.	.	.	.
THCA	CAediting_280045	chr3_49424147_-	0.0153686848738267	0.170331034787582	.	.	.	.
SKCM	CAediting_280045	chr3_49424147_-	0.0460418776347465	0.188087417782762	.	.	.	.
BLCA	CAediting_280049	chr3_49424390_-	.	.	0.0291241489017208	0.297117380509367	.	.
LGG	CAediting_280049	chr3_49424390_-	6.24349416306875e-08	0.436556000180252	.	.	.	.
BRCA	CAediting_280049	chr3_49424390_-	9.94997502968361e-21	0.406936256571572	.	.	.	.
LIHC	CAediting_280049	chr3_49424390_-	0.00141136456223033	0.306212184119529	.	.	.	.
LUAD	CAediting_280049	chr3_49424390_-	0.00369455103513248	0.247344101964642	.	.	.	.
STAD	CAediting_280049	chr3_49424390_-	0.0253744736814585	0.259831789565538	.	.	.	.
OV	CAediting_280049	chr3_49424390_-	1.08503142451423e-05	0.31639339761581	.	.	.	.
SKCM	CAediting_280049	chr3_49424390_-	0.00230666854228608	0.292960672731165	.	.	.	.

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Relation with cancer stages for NICN1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_279994	chr3_49423914_-	0.0354677959864516	0.164857824250615
BRCA	pathologic_stage	CAediting_280007	chr3_49423987_-	0.0385322618472712	0.267857756056863
BRCA	pathologic_stage	CAediting_280008	chr3_49423988_-	0.00117152097844647	0.375012879041841
BRCA	pathologic_stage	CAediting_280020	chr3_49424030_-	0.0206934707980221	-0.150538105848603
BRCA	pathologic_stage	CAediting_280049	chr3_49424390_-	0.0059930810849367	0.126188928196285
CESC	clinical_stage	CAediting_279951	chr3_49423554_-	0.0463067798211486	0.272379181207185
COAD	pathologic_stage	CAediting_280044	chr3_49424140_-	0.0239654497335932	-0.194984905666088
KIRC	pathologic_stage	CAediting_279940	chr3_49423500_-	9.81793270663593e-05	0.41678816413763
KIRC	pathologic_stage	CAediting_279961	chr3_49423656_-	0.0470973594199442	0.128298245100302
KIRC	pathologic_stage	CAediting_279964	chr3_49423673_-	2.39550615108231e-05	0.322492634140965
KIRC	pathologic_stage	CAediting_279966	chr3_49423680_-	0.00466047984969649	0.196419308983835
KIRC	pathologic_stage	CAediting_280001	chr3_49423958_-	0.0472480016377438	0.199927622414226
KIRC	pathologic_stage	CAediting_280044	chr3_49424140_-	0.00332934290594522	0.157628724010092
KIRP	clinical_stage	CAediting_279967	chr3_49423693_-	0.00930405397330963	0.43337709031818
KIRP	clinical_stage	CAediting_280044	chr3_49424140_-	0.00386253009045179	0.217341834371229
KIRP	pathologic_stage	CAediting_279965	chr3_49423674_-	0.0350821457035459	0.237483933786995
KIRP	pathologic_stage	CAediting_279967	chr3_49423693_-	0.0417100727278015	0.289120721701657
KIRP	pathologic_stage	CAediting_280044	chr3_49424140_-	0.0116086100943151	0.16725378242594
LIHC	pathologic_stage	CAediting_279940	chr3_49423500_-	0.0404111165207855	0.279852936590341
LUAD	pathologic_stage	CAediting_279949	chr3_49423552_-	0.0117181531402114	0.32609712265735
LUAD	pathologic_stage	CAediting_279964	chr3_49423673_-	0.0327108994876099	-0.207624911669952
LUAD	pathologic_stage	CAediting_280041	chr3_49424123_-	0.00513601584072422	0.300913161678997
LUSC	pathologic_stage	CAediting_279997	chr3_49423938_-	0.0089721062363531	-0.326677284988503
LUSC	pathologic_stage	CAediting_280045	chr3_49424147_-	0.0218321132948356	0.311553710383116
OV	clinical_stage	CAediting_279940	chr3_49423500_-	0.0291635957913137	0.133519614299297
OV	clinical_stage	CAediting_280032	chr3_49424070_-	0.00422140370174043	0.379939051993694
SKCM	pathologic_stage	CAediting_279966	chr3_49423680_-	0.027787318799771	0.165413867911174
STAD	pathologic_stage	CAediting_279999	chr3_49423955_-	0.016896708131009	0.312584112661982
STAD	pathologic_stage	CAediting_280044	chr3_49424140_-	0.00180216087827846	0.301085622445989
THCA	pathologic_stage	CAediting_279939	chr3_49423494_-	0.00668622459412107	0.139459188523413
THCA	pathologic_stage	CAediting_279964	chr3_49423673_-	0.0349813954368937	0.104940805563967
THCA	pathologic_stage	CAediting_280042	chr3_49424124_-	0.0179783521956749	0.121168310516139
THCA	pathologic_stage	CAediting_280044	chr3_49424140_-	0.00421928166848146	0.129709657647598
THCA	pathologic_stage	CAediting_280049	chr3_49424390_-	0.00928050825061865	0.193420526162264

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Relation with survival for NICN1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_280018	chr3_49424028_-	0.0280059694851525	0.0438326	0.00106347
BRCA	CAediting_279939	chr3_49423494_-	0.0421676848061524	0.0442777	0.153727
LUAD	CAediting_280042	chr3_49424124_-	0.0440023374766604	0.023024	14.0466
COAD	CAediting_279966	chr3_49423680_-	0.00644871145117565	0.00463278	121267
KIRP	CAediting_280042	chr3_49424124_-	0.009910857172724	0.0348423	331.362
OV	CAediting_280038	chr3_49424101_-	0.039848898990122	0.00573576	532.813
SARC	CAediting_279950	chr3_49423553_-	0.00221691589340633	0.0365633	15.4824

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RelatedDrugs for NICN1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NICN1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene