CAeditome Logo

Home

Download

Statistics

Examples

Help

Contact
Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: RPAIN (CAeditome ID:84268)

Gene summary for RPAIN

check button Gene summary
Gene informationGene symbol

RPAIN

Gene ID

84268

Gene nameRPA interacting protein
SynonymsHRIP|RIP
Cytomap

17p13.2

Type of geneprotein-coding
DescriptionRPA-interacting proteinRAP interaction proteinnuclear transporter
Modification date20210518
UniProtAcc

Q86UA6

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
RPAIN

GO:0006606

RPA-interacting protein

16135809

RPAIN

GO:0001650

RPA-interacting protein

0000052

RPAIN

GO:0005654

RPA-interacting protein

0000052


Top

RNA A-to-I events for RPAIN

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000129197.13
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1159478(5423233, +), CAediting_1159479(5423246, +), CAediting_1159480(5423254, +), CAediting_1159481(5423255, +), CAediting_1159482(5423260, +), CAediting_1159483(5423269, +), CAediting_1159484(5423271, +), CAediting_1159485(5423277, +), CAediting_1159486(5423281, +), CAediting_1159487(5423284, +), CAediting_1159488(5423287, +), CAediting_1159489(5423295, +), CAediting_1159490(5423306, +), CAediting_1159491(5423308, +), CAediting_1159492(5423314, +), CAediting_1159493(5423320, +), CAediting_1159494(5423321, +), CAediting_1159495(5423323, +), CAediting_1159496(5423325, +), CAediting_1159497(5423326, +), CAediting_1159498(5423328, +), CAediting_1159499(5423329, +), CAediting_1159500(5423357, +), CAediting_1159501(5423358, +), CAediting_1159502(5423359, +), CAediting_1159503(5423360, +), CAediting_1159504(5423361, +), CAediting_1159505(5423362, +), CAediting_1159506(5423363, +), CAediting_1159507(5423364, +), CAediting_1159508(5423365, +), CAediting_1159509(5423366, +), CAediting_1159510(5423367, +), CAediting_1159511(5423368, +), CAediting_1159512(5423371, +), CAediting_1159513(5423384, +), CAediting_1159514(5423411, +), CAediting_1159515(5423413, +), CAediting_1159516(5423414, +), CAediting_1159517(5423420, +), CAediting_1159518(5423424, +), CAediting_1159519(5423427, +), CAediting_1159520(5423433, +), CAediting_1159521(5423438, +), CAediting_1159522(5423439, +), CAediting_1159523(5423443, +), CAediting_1159524(5423444, +), CAediting_1159525(5423446, +), CAediting_1159526(5423452, +), CAediting_1159527(5423457, +), CAediting_1159528(5423463, +), CAediting_1159529(5423469, +), CAediting_1159530(5423470, +), CAediting_1159531(5423475, +), CAediting_1159532(5423781, +), CAediting_1159533(5423820, +), CAediting_1159534(5423827, +), CAediting_1159535(5423832, +), CAediting_1159536(5423852, +), CAediting_1159537(5423853, +), CAediting_1159538(5423857, +), CAediting_1159539(5423865, +), CAediting_1159540(5423929, +), CAediting_1159541(5424081, +), CAediting_1159542(5424091, +), CAediting_1159543(5424092, +), CAediting_1159544(5424100, +), CAediting_1159545(5424130, +), CAediting_1159546(5424140, +), CAediting_1159547(5424153, +), CAediting_1159548(5424154, +), CAediting_1159549(5424162, +), CAediting_1159550(5424172, +), CAediting_1159551(5424178, +), CAediting_1159552(5424186, +), CAediting_1159553(5424227, +), CAediting_1159554(5424228, +), CAediting_1159555(5424240, +), CAediting_1159556(5424254, +), CAediting_1159557(5424255, +), CAediting_1159558(5424262, +), CAediting_1159559(5424314, +), CAediting_1159560(5424316, +), CAediting_1159561(5424331, +), CAediting_1159562(5424352, +), CAediting_1159563(5424365, +), CAediting_1159564(5424366, +), CAediting_1159565(5424367, +), CAediting_1159566(5424378, +), CAediting_1159567(5424391, +), CAediting_1159568(5424392, +), CAediting_1159569(5424393, +), CAediting_1159570(5424405, +),

Top

RNA editing positional annotations for RPAIN using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1159478chr17_5423233_+ncRNA_intronic
CAediting_1159479chr17_5423246_+ncRNA_intronic
CAediting_1159480chr17_5423254_+ncRNA_intronic
CAediting_1159481chr17_5423255_+ncRNA_intronic
CAediting_1159482chr17_5423260_+ncRNA_intronic
CAediting_1159483chr17_5423269_+ncRNA_intronic
CAediting_1159484chr17_5423271_+ncRNA_intronic
CAediting_1159485chr17_5423277_+ncRNA_intronic
CAediting_1159486chr17_5423281_+ncRNA_intronic
CAediting_1159487chr17_5423284_+ncRNA_intronic
CAediting_1159488chr17_5423287_+ncRNA_intronic
CAediting_1159489chr17_5423295_+ncRNA_intronic
CAediting_1159490chr17_5423306_+ncRNA_intronic
CAediting_1159491chr17_5423308_+ncRNA_intronic
CAediting_1159492chr17_5423314_+ncRNA_intronic
CAediting_1159493chr17_5423320_+ncRNA_intronic
CAediting_1159494chr17_5423321_+ncRNA_intronic
CAediting_1159495chr17_5423323_+ncRNA_intronic
CAediting_1159496chr17_5423325_+ncRNA_intronic
CAediting_1159497chr17_5423326_+ncRNA_intronic
CAediting_1159498chr17_5423328_+ncRNA_intronic
CAediting_1159499chr17_5423329_+ncRNA_intronic
CAediting_1159500chr17_5423357_+ncRNA_intronic
CAediting_1159501chr17_5423358_+ncRNA_intronic
CAediting_1159502chr17_5423359_+ncRNA_intronic
CAediting_1159503chr17_5423360_+ncRNA_intronic
CAediting_1159504chr17_5423361_+ncRNA_intronic
CAediting_1159505chr17_5423362_+ncRNA_intronic
CAediting_1159506chr17_5423363_+ncRNA_intronic
CAediting_1159507chr17_5423364_+ncRNA_intronic
CAediting_1159508chr17_5423365_+ncRNA_intronic
CAediting_1159509chr17_5423366_+ncRNA_intronic
CAediting_1159510chr17_5423367_+ncRNA_intronic
CAediting_1159511chr17_5423368_+ncRNA_intronic
CAediting_1159512chr17_5423371_+ncRNA_intronic
CAediting_1159513chr17_5423384_+ncRNA_intronic
CAediting_1159514chr17_5423411_+ncRNA_intronic
CAediting_1159515chr17_5423413_+ncRNA_intronic
CAediting_1159516chr17_5423414_+ncRNA_intronic
CAediting_1159517chr17_5423420_+ncRNA_intronic
CAediting_1159518chr17_5423424_+ncRNA_intronic
CAediting_1159519chr17_5423427_+ncRNA_intronic
CAediting_1159520chr17_5423433_+ncRNA_intronic
CAediting_1159521chr17_5423438_+ncRNA_intronic
CAediting_1159522chr17_5423439_+ncRNA_intronic
CAediting_1159523chr17_5423443_+ncRNA_intronic
CAediting_1159524chr17_5423444_+ncRNA_intronic
CAediting_1159525chr17_5423446_+ncRNA_intronic
CAediting_1159526chr17_5423452_+ncRNA_intronic
CAediting_1159527chr17_5423457_+ncRNA_intronic
CAediting_1159528chr17_5423463_+ncRNA_intronic
CAediting_1159529chr17_5423469_+ncRNA_intronic
CAediting_1159530chr17_5423470_+ncRNA_intronic
CAediting_1159531chr17_5423475_+ncRNA_intronic
CAediting_1159532chr17_5423781_+ncRNA_intronic
CAediting_1159533chr17_5423820_+ncRNA_intronic
CAediting_1159534chr17_5423827_+ncRNA_intronic
CAediting_1159535chr17_5423832_+ncRNA_intronic
CAediting_1159536chr17_5423852_+ncRNA_intronic
CAediting_1159537chr17_5423853_+ncRNA_intronic
CAediting_1159538chr17_5423857_+ncRNA_intronic
CAediting_1159539chr17_5423865_+ncRNA_intronic
CAediting_1159540chr17_5423929_+ncRNA_intronic
CAediting_1159541chr17_5424081_+ncRNA_intronic
CAediting_1159542chr17_5424091_+ncRNA_intronic
CAediting_1159543chr17_5424092_+ncRNA_intronic
CAediting_1159544chr17_5424100_+ncRNA_intronic
CAediting_1159545chr17_5424130_+ncRNA_intronic
CAediting_1159546chr17_5424140_+ncRNA_intronic
CAediting_1159547chr17_5424153_+ncRNA_intronic
CAediting_1159548chr17_5424154_+ncRNA_intronic
CAediting_1159549chr17_5424162_+ncRNA_intronic
CAediting_1159550chr17_5424172_+ncRNA_intronic
CAediting_1159551chr17_5424178_+ncRNA_intronic
CAediting_1159552chr17_5424186_+ncRNA_intronic
CAediting_1159553chr17_5424227_+ncRNA_intronic
CAediting_1159554chr17_5424228_+ncRNA_intronic
CAediting_1159555chr17_5424240_+ncRNA_intronic
CAediting_1159556chr17_5424254_+ncRNA_intronic
CAediting_1159557chr17_5424255_+ncRNA_intronic
CAediting_1159558chr17_5424262_+ncRNA_intronic
CAediting_1159559chr17_5424314_+ncRNA_intronic
CAediting_1159560chr17_5424316_+ncRNA_intronic
CAediting_1159561chr17_5424331_+ncRNA_intronic
CAediting_1159562chr17_5424352_+ncRNA_intronic
CAediting_1159563chr17_5424365_+ncRNA_intronic
CAediting_1159564chr17_5424366_+ncRNA_intronic
CAediting_1159565chr17_5424367_+ncRNA_intronic
CAediting_1159566chr17_5424378_+ncRNA_intronic
CAediting_1159567chr17_5424391_+ncRNA_intronic
CAediting_1159568chr17_5424392_+ncRNA_intronic
CAediting_1159569chr17_5424393_+ncRNA_intronic
CAediting_1159570chr17_5424405_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1159478chr17_5423233_+SINEAluAluJr4
CAediting_1159479chr17_5423246_+SINEAluAluJr4
CAediting_1159480chr17_5423254_+SINEAluAluJr4
CAediting_1159481chr17_5423255_+SINEAluAluJr4
CAediting_1159482chr17_5423260_+SINEAluAluJr4
CAediting_1159483chr17_5423269_+SINEAluAluJr4
CAediting_1159484chr17_5423271_+SINEAluAluJr4
CAediting_1159485chr17_5423277_+SINEAluAluJr4
CAediting_1159486chr17_5423281_+SINEAluAluJr4
CAediting_1159487chr17_5423284_+SINEAluAluJr4
CAediting_1159488chr17_5423287_+SINEAluAluJr4
CAediting_1159489chr17_5423295_+SINEAluAluJr4
CAediting_1159490chr17_5423306_+SINEAluAluJr4
CAediting_1159491chr17_5423308_+SINEAluAluJr4
CAediting_1159492chr17_5423314_+SINEAluAluJr4
CAediting_1159493chr17_5423320_+SINEAluAluJr4
CAediting_1159494chr17_5423321_+SINEAluAluJr4
CAediting_1159495chr17_5423323_+SINEAluAluJr4
CAediting_1159496chr17_5423325_+SINEAluAluJr4
CAediting_1159497chr17_5423326_+SINEAluAluJr4
CAediting_1159498chr17_5423328_+SINEAluAluJr4
CAediting_1159499chr17_5423329_+SINEAluAluJr4
CAediting_1159500chr17_5423357_+SINEAluAluJr4
CAediting_1159501chr17_5423358_+SINEAluAluJr4
CAediting_1159502chr17_5423359_+SINEAluAluJr4
CAediting_1159503chr17_5423360_+SINEAluAluJr4
CAediting_1159504chr17_5423361_+SINEAluAluJr4
CAediting_1159505chr17_5423362_+SINEAluAluJr4
CAediting_1159506chr17_5423363_+SINEAluAluJr4
CAediting_1159507chr17_5423364_+SINEAluAluJr4
CAediting_1159508chr17_5423365_+SINEAluAluJr4
CAediting_1159509chr17_5423366_+SINEAluAluJr4
CAediting_1159510chr17_5423367_+SINEAluAluJr4
CAediting_1159511chr17_5423368_+SINEAluAluJr4
CAediting_1159512chr17_5423371_+SINEAluAluJr4
CAediting_1159513chr17_5423384_+SINEAluAluJr4
CAediting_1159514chr17_5423411_+SINEAluAluJr4
CAediting_1159515chr17_5423413_+SINEAluAluJr4
CAediting_1159516chr17_5423414_+SINEAluAluJr4
CAediting_1159517chr17_5423420_+SINEAluAluJr4
CAediting_1159518chr17_5423424_+SINEAluAluJr4
CAediting_1159519chr17_5423427_+SINEAluAluJr4
CAediting_1159520chr17_5423433_+SINEAluAluJr4
CAediting_1159521chr17_5423438_+SINEAluAluJr4
CAediting_1159522chr17_5423439_+SINEAluAluJr4
CAediting_1159523chr17_5423443_+SINEAluAluJr4
CAediting_1159524chr17_5423444_+SINEAluAluJr4
CAediting_1159525chr17_5423446_+SINEAluAluJr4
CAediting_1159526chr17_5423452_+SINEAluAluJr4
CAediting_1159527chr17_5423457_+SINEAluAluJr4
CAediting_1159528chr17_5423463_+SINEAluAluJr4
CAediting_1159529chr17_5423469_+SINEAluAluJr4
CAediting_1159530chr17_5423470_+SINEAluAluJr4
CAediting_1159531chr17_5423475_+SINEAluAluJr4
CAediting_1159532chr17_5423781_+SINEAluAluJb
CAediting_1159533chr17_5423820_+SINEAluAluJb
CAediting_1159534chr17_5423827_+SINEAluAluJb
CAediting_1159535chr17_5423832_+SINEAluAluJb
CAediting_1159536chr17_5423852_+SINEAluAluJb
CAediting_1159537chr17_5423853_+SINEAluAluJb
CAediting_1159538chr17_5423857_+SINEAluAluJb
CAediting_1159539chr17_5423865_+SINEAluAluJb
CAediting_1159540chr17_5423929_+SINEAluAluJb
CAediting_1159541chr17_5424081_+SINEAluAluJr
CAediting_1159542chr17_5424091_+SINEAluAluJr
CAediting_1159543chr17_5424092_+SINEAluAluJr
CAediting_1159544chr17_5424100_+SINEAluAluJr
CAediting_1159545chr17_5424130_+SINEAluAluJr
CAediting_1159546chr17_5424140_+SINEAluAluJr
CAediting_1159547chr17_5424153_+SINEAluAluJr
CAediting_1159548chr17_5424154_+SINEAluAluJr
CAediting_1159549chr17_5424162_+SINEAluAluJr
CAediting_1159550chr17_5424172_+SINEAluAluJr
CAediting_1159551chr17_5424178_+SINEAluAluJr
CAediting_1159552chr17_5424186_+SINEAluAluJr
CAediting_1159553chr17_5424227_+SINEAluAluJr
CAediting_1159554chr17_5424228_+SINEAluAluJr
CAediting_1159555chr17_5424240_+SINEAluAluJr
CAediting_1159556chr17_5424254_+SINEAluAluJr
CAediting_1159557chr17_5424255_+SINEAluAluJr
CAediting_1159558chr17_5424262_+SINEAluAluJr
CAediting_1159559chr17_5424314_+SINEAluAluJb
CAediting_1159560chr17_5424316_+SINEAluAluJb
CAediting_1159561chr17_5424331_+SINEAluAluJb
CAediting_1159562chr17_5424352_+SINEAluAluJb
CAediting_1159563chr17_5424365_+SINEAluAluJb
CAediting_1159564chr17_5424366_+SINEAluAluJb
CAediting_1159565chr17_5424367_+SINEAluAluJb
CAediting_1159566chr17_5424378_+SINEAluAluJb
CAediting_1159567chr17_5424391_+SINEAluAluJb
CAediting_1159568chr17_5424392_+SINEAluAluJb
CAediting_1159569chr17_5424393_+SINEAluAluJb
CAediting_1159570chr17_5424405_+SINEAluAluJb

Top

RNA A-to-I editing events in the alternative splicing sites for RPAIN

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000129197.13.RPAIN.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000129197.13.RPAIN.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for RPAIN

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for RPAIN

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


Top

The effects of the RNA editing to the miRNA binding sites for RPAIN

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000129197.13ENST00000575112hsa-miR-1304-3p543146754314748mer-1a54314535431474156-23.98
CAediting_980496chr14_31014685_-ENSG00000129197.13ENST00000575112hsa-miR-624-3p543028854302947mer-m854302755430295152-13.41
CAediting_980496chr14_31014685_-ENSG00000129197.13ENST00000575112hsa-miR-624-3p543103454310396mer54310195431040145-23.66
CAediting_980496chr14_31014685_-ENSG00000129197.13ENST00000575112hsa-miR-624-3p543131054313167mer-m854312975431317152-13.11
CAediting_393chr1_1167164_+ENSG00000129197.13ENST00000575112hsa-miR-200b-3p543123554312417mer-m854312235431242143-11.44
CAediting_393chr1_1167164_+ENSG00000129197.13ENST00000575112hsa-miR-200b-3p542858454285918mer-1a54285705428591168-22.51
CAediting_393chr1_1167164_+ENSG00000129197.13ENST00000575112hsa-miR-200b-3p542898654289927mer-m854289735428993165-16.62
CAediting_393chr1_1167164_+ENSG00000129197.13ENST00000405578hsa-miR-200b-3p542858454285918mer-1a54285705428591168-22.51
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000573577hsa-miR-548aa543272354327297mer-m854327055432730145-11.67
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000571558hsa-miR-195-3p542813554281406mer54281205428141141-19.09
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000571558hsa-miR-548aa543272354327297mer-m854327055432730145-11.67
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000575599hsa-miR-195-3p542813554281406mer54281205428141141-19.09
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000575599hsa-miR-548aa543272354327297mer-m854327055432730145-11.67
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000539417hsa-miR-195-3p542813554281406mer54281205428141141-19.09
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000539417hsa-miR-548aa543272354327297mer-m854327055432730145-11.67
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000381208hsa-miR-548aa543272354327297mer-m854327055432730145-11.67
CAediting_1229415chr17_67471547_+ENSG00000129197.13ENST00000575112hsa-miR-548aa543078354307897mer-m854307675430790155-15.15
CAediting_1229415chr17_67471547_+ENSG00000129197.13ENST00000575112hsa-miR-548aa542890154289077mer-m854288795428908147-10.8
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000575112hsa-miR-195-3p542908154290888mer-1a54290695429088148-13.19
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000575112hsa-miR-195-3p542813554281406mer54281205428141141-19.09
CAediting_573000chr7_92204081_-ENSG00000129197.13ENST00000575112hsa-miR-1285-5p543146954314757mer-m854314585431476164-27.06
CAediting_1160181chr17_7017644_-ENSG00000129197.13ENST00000574003hsa-miR-195-3p542813554281406mer54281205428141141-19.09

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000129197.13ENST00000575112hsa-miR-1304-3p543081654308227mer-m854308015430823149-18
CAediting_604450chr7_133034877_-ENSG00000129197.13ENST00000575112hsa-miR-3654542818654281927mer-m854281755428193140-17.54
CAediting_1229414chr17_67471546_+ENSG00000129197.13ENST00000575112hsa-miR-548aa542825754282648mer-1a54282345428264151-17.09
CAediting_1229415chr17_67471547_+ENSG00000129197.13ENST00000575112hsa-miR-548aa542825754282648mer-1a54282345428264151-17.09
CAediting_1229413chr17_67471544_+ENSG00000129197.13ENST00000575112hsa-miR-548aa542825754282648mer-1a54282345428264151-17.09
CAediting_524911chr7_5495852_-ENSG00000129197.13ENST00000575112hsa-miR-589-3p542975754297637mer-m854297415429764140-16.64
CAediting_1351755chr19_40282625_-ENSG00000129197.13ENST00000575112hsa-miR-641543079654308016mer54307795430802146-19.59
CAediting_580943chr7_100356700_+ENSG00000129197.13ENST00000575112hsa-miR-6840-3p542822054282278mer-1a54282055428227141-20.41

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RPAIN

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

Top

Relation with ADAR for RPAIN

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
STADCAediting_1159480chr17_5423254_+0.01316128757057660.25903734927166....
OVCAediting_1159483chr17_5423269_+0.03509093390462370.224968201272973....
ESCACAediting_1159486chr17_5423281_+..0.0017653647788160.408682330001643..
OVCAediting_1159524chr17_5423444_+0.008932956063462120.283642767398047....
OVCAediting_1159559chr17_5424314_+0.006786314233151720.312110704215925....
BRCACAediting_1159565chr17_5424367_+....0.04239960140408220.256543126524689

Top

Relation with cancer stages for RPAIN

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_1159520chr17_5423433_+0.00214878430021079-0.659020600449591
ESCApathologic_stageCAediting_1159483chr17_5423269_+0.0003484422079130790.399623423251542
ESCApathologic_stageCAediting_1159520chr17_5423433_+0.04730343385334820.276406413972863
ESCApathologic_stageCAediting_1159566chr17_5424378_+0.04772002467534280.273269215347698

Top

Relation with survival for RPAIN

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

Top

RelatedDrugs for RPAIN

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

Top

RelatedDiseases for RPAIN

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource