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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TMEM164 (CAeditome ID:84187)

Gene summary for TMEM164

check button Gene summary
Gene informationGene symbol

TMEM164

Gene ID

84187

Gene nametransmembrane protein 164
SynonymsbB360B22.3
Cytomap

Xq23

Type of geneprotein-coding
Descriptiontransmembrane protein 164RP13-360B22.2
Modification date20210518
UniProtAcc

Q5U3C3

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for TMEM164

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000157600.10

check button RNA A-to-I editing events in Cancer.
CAediting_1518543(110016786, +), CAediting_1518544(110016793, +), CAediting_1518545(110016798, +), CAediting_1518546(110024385, +), CAediting_1518547(110024429, +), CAediting_1518548(110024512, +), CAediting_1518549(110030260, +), CAediting_1518550(110030310, +), CAediting_1518551(110030318, +), CAediting_1518552(110030400, +), CAediting_1518553(110030557, +), CAediting_1518554(110030563, +), CAediting_1518555(110030569, +), CAediting_1518556(110030615, +), CAediting_1518557(110030627, +), CAediting_1518558(110030634, +), CAediting_1518559(110030635, +), CAediting_1518560(110030640, +), CAediting_1518561(110030646, +), CAediting_1518562(110030649, +), CAediting_1518563(110030650, +), CAediting_1518564(110030651, +), CAediting_1518565(110030652, +), CAediting_1518566(110030653, +), CAediting_1518567(110030655, +), CAediting_1518568(110030658, +), CAediting_1518569(110030659, +), CAediting_1518570(110030660, +), CAediting_1518571(110030661, +), CAediting_1518572(110030664, +), CAediting_1518573(110030690, +), CAediting_1518574(110030691, +), CAediting_1518575(110030696, +), CAediting_1518576(110030703, +), CAediting_1518577(110030717, +), CAediting_1518578(110030731, +), CAediting_1518579(110030732, +), CAediting_1518580(110030771, +), CAediting_1518581(110030967, +), CAediting_1518582(110030971, +), CAediting_1518583(110030977, +), CAediting_1518584(110031025, +), CAediting_1518585(110031026, +), CAediting_1518586(110031202, +), CAediting_1518587(110031257, +), CAediting_1518588(110031260, +), CAediting_1518589(110031351, +), CAediting_1518590(110031356, +), CAediting_1518591(110031359, +), CAediting_1518592(110031459, +), CAediting_1518593(110036946, +), CAediting_1518594(110044539, +), CAediting_1518595(110044543, +), CAediting_1518596(110060146, +), CAediting_1518597(110060192, +), CAediting_1518598(110064876, +), CAediting_1518599(110070629, +), CAediting_1518600(110070630, +), CAediting_1518601(110070678, +), CAediting_1518602(110071589, +), CAediting_1518603(110071602, +), CAediting_1518604(110071622, +), CAediting_1518605(110071624, +), CAediting_1518606(110071625, +), CAediting_1518607(110071654, +), CAediting_1518608(110071674, +), CAediting_1518609(110071780, +), CAediting_1518610(110071803, +), CAediting_1518611(110072045, +), CAediting_1518612(110072046, +), CAediting_1518613(110072099, +), CAediting_1518614(110072111, +), CAediting_1518615(110072115, +), CAediting_1518616(110072154, +), CAediting_1518617(110072180, +), CAediting_1518618(110072181, +), CAediting_1518619(110072186, +), CAediting_1518620(110072213, +), CAediting_1518621(110072216, +), CAediting_1518622(110072221, +), CAediting_1518623(110073931, +), CAediting_1518624(110102219, +), CAediting_1518625(110102226, +), CAediting_1518626(110103722, +), CAediting_1518627(110103725, +), CAediting_1518628(110103805, +), CAediting_1518629(110104434, +), CAediting_1518630(110104435, +), CAediting_1518631(110104440, +), CAediting_1518632(110104472, +), CAediting_1518633(110104473, +), CAediting_1518634(110104474, +), CAediting_1518635(110104493, +), CAediting_1518636(110104503, +), CAediting_1518637(110104514, +), CAediting_1518638(110104515, +), CAediting_1518639(110104516, +), CAediting_1518640(110104521, +), CAediting_1518641(110104528, +), CAediting_1518642(110118042, +), CAediting_1518643(110121555, +), CAediting_1518644(110121572, +), CAediting_1518645(110133207, +), CAediting_1518646(110133250, +), CAediting_1518647(110133280, +), CAediting_1518648(110133353, +), CAediting_1518649(110134325, +), CAediting_1518650(110134364, +), CAediting_1518651(110134366, +), CAediting_1518652(110134371, +), CAediting_1518653(110134372, +), CAediting_1518654(110134418, +), CAediting_1518655(110134439, +), CAediting_1518656(110134445, +), CAediting_1518657(110134449, +), CAediting_1518658(110134485, +), CAediting_1518659(110174105, +),

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RNA editing positional annotations for TMEM164 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1518543chrX_110016786_+ncRNA_intronic
CAediting_1518544chrX_110016793_+ncRNA_intronic
CAediting_1518545chrX_110016798_+ncRNA_intronic
CAediting_1518546chrX_110024385_+ncRNA_intronic
CAediting_1518547chrX_110024429_+ncRNA_intronic
CAediting_1518548chrX_110024512_+ncRNA_intronic
CAediting_1518549chrX_110030260_+ncRNA_intronic
CAediting_1518550chrX_110030310_+ncRNA_intronic
CAediting_1518551chrX_110030318_+ncRNA_intronic
CAediting_1518552chrX_110030400_+ncRNA_intronic
CAediting_1518553chrX_110030557_+ncRNA_intronic
CAediting_1518554chrX_110030563_+ncRNA_intronic
CAediting_1518555chrX_110030569_+ncRNA_intronic
CAediting_1518556chrX_110030615_+ncRNA_intronic
CAediting_1518557chrX_110030627_+ncRNA_intronic
CAediting_1518558chrX_110030634_+ncRNA_intronic
CAediting_1518559chrX_110030635_+ncRNA_intronic
CAediting_1518560chrX_110030640_+ncRNA_intronic
CAediting_1518561chrX_110030646_+ncRNA_intronic
CAediting_1518562chrX_110030649_+ncRNA_intronic
CAediting_1518563chrX_110030650_+ncRNA_intronic
CAediting_1518564chrX_110030651_+ncRNA_intronic
CAediting_1518565chrX_110030652_+ncRNA_intronic
CAediting_1518566chrX_110030653_+ncRNA_intronic
CAediting_1518567chrX_110030655_+ncRNA_intronic
CAediting_1518568chrX_110030658_+ncRNA_intronic
CAediting_1518569chrX_110030659_+ncRNA_intronic
CAediting_1518570chrX_110030660_+ncRNA_intronic
CAediting_1518571chrX_110030661_+ncRNA_intronic
CAediting_1518572chrX_110030664_+ncRNA_intronic
CAediting_1518573chrX_110030690_+ncRNA_intronic
CAediting_1518574chrX_110030691_+ncRNA_intronic
CAediting_1518575chrX_110030696_+ncRNA_intronic
CAediting_1518576chrX_110030703_+ncRNA_intronic
CAediting_1518577chrX_110030717_+ncRNA_intronic
CAediting_1518578chrX_110030731_+ncRNA_intronic
CAediting_1518579chrX_110030732_+ncRNA_intronic
CAediting_1518580chrX_110030771_+ncRNA_intronic
CAediting_1518581chrX_110030967_+ncRNA_intronic
CAediting_1518582chrX_110030971_+ncRNA_intronic
CAediting_1518583chrX_110030977_+ncRNA_intronic
CAediting_1518584chrX_110031025_+ncRNA_intronic
CAediting_1518585chrX_110031026_+ncRNA_intronic
CAediting_1518586chrX_110031202_+ncRNA_intronic
CAediting_1518587chrX_110031257_+ncRNA_intronic
CAediting_1518588chrX_110031260_+ncRNA_intronic
CAediting_1518589chrX_110031351_+ncRNA_intronic
CAediting_1518590chrX_110031356_+ncRNA_intronic
CAediting_1518591chrX_110031359_+ncRNA_intronic
CAediting_1518592chrX_110031459_+ncRNA_intronic
CAediting_1518593chrX_110036946_+ncRNA_intronic
CAediting_1518594chrX_110044539_+ncRNA_intronic
CAediting_1518595chrX_110044543_+ncRNA_intronic
CAediting_1518596chrX_110060146_+ncRNA_intronic
CAediting_1518597chrX_110060192_+ncRNA_intronic
CAediting_1518598chrX_110064876_+ncRNA_intronic
CAediting_1518599chrX_110070629_+ncRNA_intronic
CAediting_1518600chrX_110070630_+ncRNA_intronic
CAediting_1518601chrX_110070678_+ncRNA_intronic
CAediting_1518602chrX_110071589_+ncRNA_intronic
CAediting_1518603chrX_110071602_+ncRNA_intronic
CAediting_1518604chrX_110071622_+ncRNA_intronic
CAediting_1518605chrX_110071624_+ncRNA_intronic
CAediting_1518606chrX_110071625_+ncRNA_intronic
CAediting_1518607chrX_110071654_+ncRNA_intronic
CAediting_1518608chrX_110071674_+ncRNA_intronic
CAediting_1518609chrX_110071780_+ncRNA_intronic
CAediting_1518610chrX_110071803_+ncRNA_intronic
CAediting_1518611chrX_110072045_+ncRNA_intronic
CAediting_1518612chrX_110072046_+ncRNA_intronic
CAediting_1518613chrX_110072099_+ncRNA_intronic
CAediting_1518614chrX_110072111_+ncRNA_intronic
CAediting_1518615chrX_110072115_+ncRNA_intronic
CAediting_1518616chrX_110072154_+ncRNA_intronic
CAediting_1518617chrX_110072180_+ncRNA_intronic
CAediting_1518618chrX_110072181_+ncRNA_intronic
CAediting_1518619chrX_110072186_+ncRNA_intronic
CAediting_1518620chrX_110072213_+ncRNA_intronic
CAediting_1518621chrX_110072216_+ncRNA_intronic
CAediting_1518622chrX_110072221_+ncRNA_intronic
CAediting_1518623chrX_110073931_+ncRNA_intronic
CAediting_1518624chrX_110102219_+ncRNA_intronic
CAediting_1518625chrX_110102226_+ncRNA_intronic
CAediting_1518626chrX_110103722_+ncRNA_intronic
CAediting_1518627chrX_110103725_+ncRNA_intronic
CAediting_1518628chrX_110103805_+ncRNA_intronic
CAediting_1518629chrX_110104434_+ncRNA_intronic
CAediting_1518630chrX_110104435_+ncRNA_intronic
CAediting_1518631chrX_110104440_+ncRNA_intronic
CAediting_1518632chrX_110104472_+ncRNA_intronic
CAediting_1518633chrX_110104473_+ncRNA_intronic
CAediting_1518634chrX_110104474_+ncRNA_intronic
CAediting_1518635chrX_110104493_+ncRNA_intronic
CAediting_1518636chrX_110104503_+ncRNA_intronic
CAediting_1518637chrX_110104514_+ncRNA_intronic
CAediting_1518638chrX_110104515_+ncRNA_intronic
CAediting_1518639chrX_110104516_+ncRNA_intronic
CAediting_1518640chrX_110104521_+ncRNA_intronic
CAediting_1518641chrX_110104528_+ncRNA_intronic
CAediting_1518642chrX_110118042_+ncRNA_intronic
CAediting_1518643chrX_110121555_+ncRNA_intronic
CAediting_1518644chrX_110121572_+ncRNA_intronic
CAediting_1518645chrX_110133207_+ncRNA_intronic
CAediting_1518646chrX_110133250_+ncRNA_intronic
CAediting_1518647chrX_110133280_+ncRNA_intronic
CAediting_1518648chrX_110133353_+ncRNA_intronic
CAediting_1518649chrX_110134325_+ncRNA_intronic
CAediting_1518650chrX_110134364_+ncRNA_intronic
CAediting_1518651chrX_110134366_+ncRNA_intronic
CAediting_1518652chrX_110134371_+ncRNA_intronic
CAediting_1518653chrX_110134372_+ncRNA_intronic
CAediting_1518654chrX_110134418_+ncRNA_intronic
CAediting_1518655chrX_110134439_+ncRNA_intronic
CAediting_1518656chrX_110134445_+ncRNA_intronic
CAediting_1518657chrX_110134449_+ncRNA_intronic
CAediting_1518658chrX_110134485_+ncRNA_intronic
CAediting_1518659chrX_110174105_+ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1518543chrX_110016786_+SINEAluAluJo
CAediting_1518544chrX_110016793_+SINEAluAluJo
CAediting_1518545chrX_110016798_+SINEAluAluJo
CAediting_1518546chrX_110024385_+SINEAluAluJr4
CAediting_1518547chrX_110024429_+SINEAluAluJr4
CAediting_1518548chrX_110024512_+SINEAluAluJr4
CAediting_1518549chrX_110030260_+SINEAluAluJb
CAediting_1518550chrX_110030310_+SINEAluAluJb
CAediting_1518551chrX_110030318_+SINEAluAluJb
CAediting_1518552chrX_110030400_+SINEAluAluJb
CAediting_1518553chrX_110030557_+SINEAluAluSx1
CAediting_1518554chrX_110030563_+SINEAluAluSx1
CAediting_1518555chrX_110030569_+SINEAluAluSx1
CAediting_1518556chrX_110030615_+SINEAluAluSx1
CAediting_1518557chrX_110030627_+SINEAluAluSx1
CAediting_1518558chrX_110030634_+SINEAluAluSx1
CAediting_1518559chrX_110030635_+SINEAluAluSx1
CAediting_1518560chrX_110030640_+SINEAluAluSx1
CAediting_1518561chrX_110030646_+SINEAluAluSx1
CAediting_1518562chrX_110030649_+SINEAluAluSx1
CAediting_1518563chrX_110030650_+SINEAluAluSx1
CAediting_1518564chrX_110030651_+SINEAluAluSx1
CAediting_1518565chrX_110030652_+SINEAluAluSx1
CAediting_1518566chrX_110030653_+SINEAluAluSx1
CAediting_1518567chrX_110030655_+SINEAluAluSx1
CAediting_1518568chrX_110030658_+SINEAluAluSx1
CAediting_1518569chrX_110030659_+SINEAluAluSx1
CAediting_1518570chrX_110030660_+SINEAluAluSx1
CAediting_1518571chrX_110030661_+SINEAluAluSx1
CAediting_1518572chrX_110030664_+SINEAluAluSx1
CAediting_1518573chrX_110030690_+SINEAluAluSx1
CAediting_1518574chrX_110030691_+SINEAluAluSx1
CAediting_1518575chrX_110030696_+SINEAluAluSx1
CAediting_1518576chrX_110030703_+SINEAluAluSx1
CAediting_1518577chrX_110030717_+SINEAluAluSx1
CAediting_1518578chrX_110030731_+SINEAluAluSx1
CAediting_1518579chrX_110030732_+SINEAluAluSx1
CAediting_1518580chrX_110030771_+SINEAluAluSx1
CAediting_1518581chrX_110030967_+LINEL1L1PA7
CAediting_1518582chrX_110030971_+LINEL1L1PA7
CAediting_1518583chrX_110030977_+LINEL1L1PA7
CAediting_1518584chrX_110031025_+LINEL1L1PA7
CAediting_1518585chrX_110031026_+LINEL1L1PA7
CAediting_1518586chrX_110031202_+LINEL1L1PA7
CAediting_1518587chrX_110031257_+LINEL1L1PA7
CAediting_1518588chrX_110031260_+LINEL1L1PA7
CAediting_1518589chrX_110031351_+SINEAluAluJr
CAediting_1518590chrX_110031356_+SINEAluAluJr
CAediting_1518591chrX_110031359_+SINEAluAluJr
CAediting_1518592chrX_110031459_+SINEAluAluJr
CAediting_1518593chrX_110036946_+DNAhAT-CharlieMER3
CAediting_1518594chrX_110044539_+SINEAluAluJo
CAediting_1518595chrX_110044543_+SINEAluAluJo
CAediting_1518596chrX_110060146_+SINEAluAluJr
CAediting_1518597chrX_110060192_+SINEAluAluJr
CAediting_1518598chrX_110064876_+SINEAluAluJr
CAediting_1518599chrX_110070629_+SINEAluAluSz
CAediting_1518600chrX_110070630_+SINEAluAluSz
CAediting_1518601chrX_110070678_+SINEAluAluSz
CAediting_1518602chrX_110071589_+LINEL1L1ME3G
CAediting_1518603chrX_110071602_+SINEAluAluJr
CAediting_1518604chrX_110071622_+SINEAluAluJr
CAediting_1518605chrX_110071624_+SINEAluAluJr
CAediting_1518606chrX_110071625_+SINEAluAluJr
CAediting_1518607chrX_110071654_+SINEAluAluJr
CAediting_1518608chrX_110071674_+SINEAluAluJr
CAediting_1518609chrX_110071780_+SINEAluAluJr
CAediting_1518610chrX_110071803_+SINEAluAluJr
CAediting_1518611chrX_110072045_+SINEAluAluSx1
CAediting_1518612chrX_110072046_+SINEAluAluSx1
CAediting_1518613chrX_110072099_+SINEAluAluSx1
CAediting_1518614chrX_110072111_+SINEAluAluSx1
CAediting_1518615chrX_110072115_+SINEAluAluSx1
CAediting_1518616chrX_110072154_+SINEAluAluSx1
CAediting_1518617chrX_110072180_+SINEAluAluSx1
CAediting_1518618chrX_110072181_+SINEAluAluSx1
CAediting_1518619chrX_110072186_+SINEAluAluSx1
CAediting_1518620chrX_110072213_+SINEAluAluSx1
CAediting_1518621chrX_110072216_+SINEAluAluSx1
CAediting_1518622chrX_110072221_+SINEAluAluSx1
CAediting_1518623chrX_110073931_+SINEAluAluSx
CAediting_1518624chrX_110102219_+SINEAluAluSx1
CAediting_1518625chrX_110102226_+SINEAluAluSx1
CAediting_1518626chrX_110103722_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518627chrX_110103725_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518628chrX_110103805_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518629chrX_110104434_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518630chrX_110104435_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518631chrX_110104440_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518632chrX_110104472_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518633chrX_110104473_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518634chrX_110104474_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518635chrX_110104493_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518636chrX_110104503_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518637chrX_110104514_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518638chrX_110104515_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518639chrX_110104516_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518640chrX_110104521_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518641chrX_110104528_+DNATcMar-TiggerTigger2b_Pri
CAediting_1518642chrX_110118042_+SINEAluAluSz
CAediting_1518643chrX_110121555_+LINEL1L1MB7
CAediting_1518644chrX_110121572_+LINEL1L1MB7
CAediting_1518645chrX_110133207_+SINEAluAluSx1
CAediting_1518646chrX_110133250_+SINEAluAluSx1
CAediting_1518647chrX_110133280_+SINEAluAluSx1
CAediting_1518648chrX_110133353_+SINEAluAluSx1
CAediting_1518649chrX_110134325_+SINEAluAluSz6
CAediting_1518650chrX_110134364_+SINEAluAluSz6
CAediting_1518651chrX_110134366_+SINEAluAluSz6
CAediting_1518652chrX_110134371_+SINEAluAluSz6
CAediting_1518653chrX_110134372_+SINEAluAluSz6
CAediting_1518654chrX_110134418_+SINEAluAluSz6
CAediting_1518655chrX_110134439_+SINEAluAluSz6
CAediting_1518656chrX_110134445_+SINEAluAluSz6
CAediting_1518657chrX_110134449_+SINEAluAluSz6
CAediting_1518658chrX_110134485_+SINEAluAluSz6

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RNA A-to-I editing events in the alternative splicing sites for TMEM164

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000157600.10.TMEM164.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000157600.10.TMEM164.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMEM164

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TMEM164

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TMEM164

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372072hsa-miR-5586-5p1101741011101741077mer-m8110174087110174108144.00-14.38
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372072hsa-miR-6720-5p1101741001101741067mer-m8110174083110174107155.00-23.83
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372073hsa-miR-5586-5p1101741011101741077mer-m8110174087110174108144.00-14.38
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372073hsa-miR-6720-5p1101741001101741067mer-m8110174083110174107155.00-23.83
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000288381hsa-miR-5586-5p1101741011101741077mer-m8110174087110174108144.00-14.38
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000288381hsa-miR-6720-5p1101741001101741067mer-m8110174083110174107155.00-23.83

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372072hsa-miR-1287-3p1101741001101741067mer-m8110174086110174107140-13.25
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000372073hsa-miR-1287-3p1101741001101741067mer-m8110174086110174107140-13.25
CAediting_1518659chrX_110174105_+ENSG00000157600.10ENST00000288381hsa-miR-1287-3p1101741001101741067mer-m8110174086110174107140-13.25

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000372072hsa-miR-605-3p1101759191101759257mer-1a110175915110175937143-18.05
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000372072hsa-miR-605-3p1101763051101763128mer-1a110176291110176312140-19.42
CAediting_980496chr14_31014685_-ENSG00000157600.10ENST00000372072hsa-miR-624-3p1101741871101741937mer-m8110174173110174194156-23.52
CAediting_688080chr9_63819626_+ENSG00000157600.10ENST00000372072hsa-miR-4477b1101764631101764708mer-1a110176449110176470142-10.02
CAediting_688081chr9_63819627_+ENSG00000157600.10ENST00000372072hsa-miR-4477b1101774761101774838mer-1a110177460110177483147-13.38
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000372073hsa-miR-605-3p1101759191101759257mer-1a110175915110175937143-18.05
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000372073hsa-miR-605-3p1101763051101763128mer-1a110176291110176312140-19.42
CAediting_980496chr14_31014685_-ENSG00000157600.10ENST00000372073hsa-miR-624-3p1101741871101741937mer-m8110174173110174194156-23.52
CAediting_688080chr9_63819626_+ENSG00000157600.10ENST00000372073hsa-miR-4477b1101764631101764708mer-1a110176449110176470142-10.02
CAediting_688081chr9_63819627_+ENSG00000157600.10ENST00000372073hsa-miR-4477b1101774761101774838mer-1a110177460110177483147-13.38
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000288381hsa-miR-605-3p1101759191101759257mer-1a110175915110175937143-18.05
CAediting_748296chr10_51299626_+ENSG00000157600.10ENST00000288381hsa-miR-605-3p1101763051101763128mer-1a110176291110176312140-19.42
CAediting_980496chr14_31014685_-ENSG00000157600.10ENST00000288381hsa-miR-624-3p1101741871101741937mer-m8110174173110174194156-23.52
CAediting_688080chr9_63819626_+ENSG00000157600.10ENST00000288381hsa-miR-4477b1101764631101764708mer-1a110176449110176470142-10.02
CAediting_688081chr9_63819627_+ENSG00000157600.10ENST00000288381hsa-miR-4477b1101774761101774838mer-1a110177460110177483147-13.38
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000372072hsa-miR-45121101769571101769648mer-1a110176943110176964144-22.67
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101768371101768437mer-m8110176816110176844144-13.02
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101773181101773247mer-m8110177297110177325153-15.94
CAediting_1351755chr19_40282625_-ENSG00000157600.10ENST00000372072hsa-miR-6411101736281101736347mer-m8110173614110173635146-15.52
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372072hsa-miR-320e1101736101101736167mer-m8110173600110173617152-23.76
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372072hsa-miR-320e1101760231101760297mer-m8110176013110176030151-19.63
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000372072hsa-miR-561-3p1101772131101772197mer-m8110177197110177220144-7.65
CAediting_396018chr5_1062918_-ENSG00000157600.10ENST00000372072hsa-miR-46351101747471101747537mer-m8110174734110174754152-16.88
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000372072hsa-miR-589-3p1101755421101755487mer-m8110175526110175549166-19.53
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000372072hsa-miR-589-3p1101775241101775307mer-m8110177510110177531145-23.51
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000372073hsa-miR-45121101769571101769648mer-1a110176943110176964144-22.67
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101768371101768437mer-m8110176816110176844144-13.02
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101773181101773247mer-m8110177297110177325153-15.94
CAediting_1351755chr19_40282625_-ENSG00000157600.10ENST00000372073hsa-miR-6411101736281101736347mer-m8110173614110173635146-15.52
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372073hsa-miR-320e1101736101101736167mer-m8110173600110173617152-23.76
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372073hsa-miR-320e1101760231101760297mer-m8110176013110176030151-19.63
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000372073hsa-miR-561-3p1101772131101772197mer-m8110177197110177220144-7.65
CAediting_396018chr5_1062918_-ENSG00000157600.10ENST00000372073hsa-miR-46351101747471101747537mer-m8110174734110174754152-16.88
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000372073hsa-miR-589-3p1101755421101755487mer-m8110175526110175549166-19.53
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000372073hsa-miR-589-3p1101775241101775307mer-m8110177510110177531145-23.51
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000288381hsa-miR-45121101769571101769648mer-1a110176943110176964144-22.67
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101768371101768437mer-m8110176816110176844144-13.02
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101773181101773247mer-m8110177297110177325153-15.94
CAediting_1351755chr19_40282625_-ENSG00000157600.10ENST00000288381hsa-miR-6411101736281101736347mer-m8110173614110173635146-15.52
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000288381hsa-miR-320e1101736101101736167mer-m8110173600110173617152-23.76
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000288381hsa-miR-320e1101760231101760297mer-m8110176013110176030151-19.63
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000288381hsa-miR-561-3p1101772131101772197mer-m8110177197110177220144-7.65
CAediting_396018chr5_1062918_-ENSG00000157600.10ENST00000288381hsa-miR-46351101747471101747537mer-m8110174734110174754152-16.88
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000288381hsa-miR-589-3p1101755421101755487mer-m8110175526110175549166-19.53
CAediting_524911chr7_5495852_-ENSG00000157600.10ENST00000288381hsa-miR-589-3p1101775241101775307mer-m8110177510110177531145-23.51
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101746071101746148mer-1a110174597110174614151-23.03
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101760271101760326mer110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101760291101760368mer-1a110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101764621101764687mer-1a110176451110176468147-28.27
CAediting_1524209chrX_134546392_-ENSG00000157600.10ENST00000372072hsa-miR-503-5p1101753811101753877mer-1a110175364110175387147-26.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101746071101746148mer-1a110174597110174614151-23.03
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101760271101760326mer110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101760291101760368mer-1a110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101764621101764687mer-1a110176451110176468147-28.27
CAediting_1524209chrX_134546392_-ENSG00000157600.10ENST00000372073hsa-miR-503-5p1101753811101753877mer-1a110175364110175387147-26.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101746071101746148mer-1a110174597110174614151-23.03
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101760271101760326mer110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101760291101760368mer-1a110176019110176036147-25.67
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101764621101764687mer-1a110176451110176468147-28.27
CAediting_1524209chrX_134546392_-ENSG00000157600.10ENST00000288381hsa-miR-503-5p1101753811101753877mer-1a110175364110175387147-26.67

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000372072hsa-miR-200b-3p1101749071101749137mer-m8110174891110174914149-15.09
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000372072hsa-miR-200b-3p1101763111101763177mer-m8110176298110176318145-13.36
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372072hsa-miR-320e1101759551101759617mer-m8110175943110175962146-19.52
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000372072hsa-miR-45121101769341101769407mer-m8110176919110176941144-18.57
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000372072hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000372072hsa-miR-561-3p1101751541101751607mer-m8110175142110175161145-10.16
CAediting_1399425chr20_1392958_-ENSG00000157600.10ENST00000372072hsa-miR-6869-5p1101771321101771387mer-m8110177120110177139144-15.73
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101736711101736777mer-m8110173660110173678153-18.8
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372072hsa-miR-6891-5p1101770391101770457mer-m8110177028110177046145-16.66
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000372073hsa-miR-200b-3p1101749071101749137mer-m8110174891110174914149-15.09
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000372073hsa-miR-200b-3p1101763111101763177mer-m8110176298110176318145-13.36
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000372073hsa-miR-320e1101759551101759617mer-m8110175943110175962146-19.52
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000372073hsa-miR-45121101769341101769407mer-m8110176919110176941144-18.57
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000372073hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000372073hsa-miR-561-3p1101751541101751607mer-m8110175142110175161145-10.16
CAediting_1399425chr20_1392958_-ENSG00000157600.10ENST00000372073hsa-miR-6869-5p1101771321101771387mer-m8110177120110177139144-15.73
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101736711101736777mer-m8110173660110173678153-18.8
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000372073hsa-miR-6891-5p1101770391101770457mer-m8110177028110177046145-16.66
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000288381hsa-miR-200b-3p1101749071101749137mer-m8110174891110174914149-15.09
CAediting_393chr1_1167164_+ENSG00000157600.10ENST00000288381hsa-miR-200b-3p1101763111101763177mer-m8110176298110176318145-13.36
CAediting_1368054chr19_46709310_-ENSG00000157600.10ENST00000288381hsa-miR-320e1101759551101759617mer-m8110175943110175962146-19.52
CAediting_1054808chr15_66496985_-ENSG00000157600.10ENST00000288381hsa-miR-45121101769341101769407mer-m8110176919110176941144-18.57
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101763181101763247mer-m8110176303110176325152-9.79
CAediting_1229413chr17_67471544_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229415chr17_67471547_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_1229414chr17_67471546_+ENSG00000157600.10ENST00000288381hsa-miR-548aa1101744461101744527mer-m8110174425110174453152-13.8
CAediting_228905chr2_188297554_+ENSG00000157600.10ENST00000288381hsa-miR-561-3p1101751541101751607mer-m8110175142110175161145-10.16
CAediting_1399425chr20_1392958_-ENSG00000157600.10ENST00000288381hsa-miR-6869-5p1101771321101771387mer-m8110177120110177139144-15.73
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101736711101736777mer-m8110173660110173678153-18.8
CAediting_468389chr6_31355314_-ENSG00000157600.10ENST00000288381hsa-miR-6891-5p1101770391101770457mer-m8110177028110177046145-16.66

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMEM164

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TMEM164

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1518659chrX_110174105_+0.0007637328189114970.26182680305043....
LUADCAediting_1518659chrX_110174105_+0.006199953191768660.371270128043932....

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Relation with cancer stages for TMEM164

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for TMEM164

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TMEM164

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMEM164

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TMEM164C0019193Hepatitis, Toxic1CTD_human
TMEM164C0860207Drug-Induced Liver Disease1CTD_human
TMEM164C1262760Hepatitis, Drug-Induced1CTD_human
TMEM164C3658290Drug-Induced Acute Liver Injury1CTD_human
TMEM164C4277682Chemical and Drug Induced Liver Injury1CTD_human
TMEM164C4279912Chemically-Induced Liver Toxicity1CTD_human