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Editing gene: NLRC5 (CAeditome ID:84166)

Gene summary for NLRC5

Gene summary

Gene information	Gene symbol	NLRC5
	Gene ID	84166
	Gene name	NLR family CARD domain containing 5
	Synonyms	CLR16.1\|NOD27\|NOD4
	Cytomap	16q13
	Type of gene	protein-coding
	Description	protein NLRC5NOD-like receptor C5caterpiller protein 16.1nucleotide-binding oligomerization domain protein 4nucleotide-binding oligomerization domain, leucine rich repeat and CARD domain containing 5nucleotide-binding oligomerization domains 27
	Modification date	20210529
	UniProtAcc	Q86WI3
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NLRC5	GO:0000978	Protein NLRC5	20639463
NLRC5	GO:0032088	Protein NLRC5	20434986
NLRC5	GO:0043549	Protein NLRC5	20434986
NLRC5	GO:0045345	Protein NLRC5	20639463
NLRC5	GO:0045944	Protein NLRC5	20639463
NLRC5	GO:0060335	Protein NLRC5	20061403
NLRC5	GO:0060339	Protein NLRC5	20434986
NLRC5	GO:0060340	Protein NLRC5	20061403
NLRC5	GO:0005634	Protein NLRC5	20639463
NLRC5	GO:0005737	Protein NLRC5	20061403
NLRC5	GO:0005737	Protein NLRC5	20434986
NLRC5	GO:0005813	Protein NLRC5	0000052
NLRC5	GO:0005829	Protein NLRC5	0000052
NLRC5	GO:0005829	Protein NLRC5	20639463

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RNA A-to-I events for NLRC5

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000140853.14

RNA A-to-I editing events in Cancer.

CAediting_1117168(56991548, +), CAediting_1117169(56991602, +), CAediting_1117170(56992606, +), CAediting_1117171(56992616, +), CAediting_1117172(56992642, +), CAediting_1117173(56992651, +), CAediting_1117174(56992657, +), CAediting_1117175(56992666, +), CAediting_1117176(56992669, +), CAediting_1117177(56992739, +), CAediting_1117178(56992740, +), CAediting_1117179(56992745, +), CAediting_1117180(56992768, +), CAediting_1117181(56994989, +), CAediting_1117182(56994998, +), CAediting_1117183(56995031, +), CAediting_1117184(56995053, +), CAediting_1117185(56995054, +), CAediting_1117186(56995063, +), CAediting_1117187(56995080, +), CAediting_1117188(56995085, +), CAediting_1117189(56995086, +), CAediting_1117190(56995095, +), CAediting_1117191(56996277, +), CAediting_1117192(56996303, +), CAediting_1117193(56996307, +), CAediting_1117194(56996317, +), CAediting_1117195(56996327, +), CAediting_1117196(56996395, +), CAediting_1117197(56996424, +), CAediting_1117198(56996448, +), CAediting_1117199(56996969, +), CAediting_1117200(56997134, +), CAediting_1117201(56997146, +), CAediting_1117202(57002277, +), CAediting_1117203(57003085, +), CAediting_1117204(57003188, +), CAediting_1117205(57003302, +), CAediting_1117206(57004305, +), CAediting_1117207(57004364, +), CAediting_1117208(57005381, +), CAediting_1117209(57005397, +), CAediting_1117210(57005404, +), CAediting_1117211(57005410, +), CAediting_1117212(57005425, +), CAediting_1117213(57005426, +), CAediting_1117214(57005430, +), CAediting_1117215(57005472, +), CAediting_1117216(57005733, +), CAediting_1117217(57005741, +), CAediting_1117218(57005742, +), CAediting_1117219(57005743, +), CAediting_1117220(57005756, +), CAediting_1117221(57005759, +), CAediting_1117222(57005760, +), CAediting_1117223(57005761, +), CAediting_1117224(57005763, +), CAediting_1117225(57005769, +), CAediting_1117226(57005770, +), CAediting_1117227(57005773, +), CAediting_1117228(57005799, +), CAediting_1117229(57005839, +), CAediting_1117230(57005840, +), CAediting_1117231(57005845, +), CAediting_1117232(57005875, +), CAediting_1117233(57006021, +), CAediting_1117234(57006116, +), CAediting_1117235(57006128, +), CAediting_1117236(57006173, +), CAediting_1117237(57006183, +), CAediting_1117238(57006204, +), CAediting_1117239(57006219, +), CAediting_1117240(57006220, +), CAediting_1117241(57006260, +), CAediting_1117242(57006261, +), CAediting_1117243(57006442, +), CAediting_1117244(57007473, +), CAediting_1117245(57007584, +), CAediting_1117246(57007591, +), CAediting_1117247(57007610, +), CAediting_1117248(57007635, +), CAediting_1117249(57007649, +), CAediting_1117250(57007664, +), CAediting_1117251(57008126, +), CAediting_1117252(57009500, +), CAediting_1117253(57010478, +), CAediting_1117254(57010503, +), CAediting_1117255(57010572, +), CAediting_1117256(57010577, +), CAediting_1117257(57010583, +), CAediting_1117258(57010620, +), CAediting_1117259(57010647, +), CAediting_1117260(57011262, +), CAediting_1117261(57011290, +), CAediting_1117262(57011293, +), CAediting_1117263(57011306, +), CAediting_1117264(57011376, +), CAediting_1117265(57011388, +), CAediting_1117266(57011508, +), CAediting_1117267(57011521, +), CAediting_1117268(57011561, +), CAediting_1117269(57011571, +), CAediting_1117270(57011572, +), CAediting_1117271(57011575, +), CAediting_1117272(57011583, +), CAediting_1117273(57011615, +), CAediting_1117274(57011628, +), CAediting_1117275(57011637, +), CAediting_1117276(57011643, +), CAediting_1117277(57011670, +), CAediting_1117278(57011673, +), CAediting_1117279(57015028, +), CAediting_1117280(57015101, +), CAediting_1117281(57015112, +), CAediting_1117282(57015149, +), CAediting_1117283(57015172, +), CAediting_1117284(57015714, +), CAediting_1117285(57015727, +), CAediting_1117286(57015738, +), CAediting_1117287(57015775, +), CAediting_1117288(57015777, +), CAediting_1117289(57015780, +), CAediting_1117290(57015807, +), CAediting_1117291(57015832, +), CAediting_1117292(57015833, +), CAediting_1117293(57016001, +), CAediting_1117294(57016014, +), CAediting_1117295(57016094, +), CAediting_1117296(57016095, +), CAediting_1117297(57016140, +), CAediting_1117298(57016168, +), CAediting_1117299(57021606, +), CAediting_1117300(57034484, +), CAediting_1117301(57034485, +), CAediting_1117302(57038312, +), CAediting_1117303(57038361, +), CAediting_1117304(57038422, +), CAediting_1117305(57038526, +), CAediting_1117306(57038725, +), CAediting_1117307(57038784, +), CAediting_1117308(57044226, +), CAediting_1117309(57044230, +), CAediting_1117310(57044238, +), CAediting_1117311(57044317, +), CAediting_1117312(57044649, +), CAediting_1117313(57044650, +), CAediting_1117314(57044658, +), CAediting_1117315(57044849, +), CAediting_1117316(57044912, +), CAediting_1117317(57045021, +), CAediting_1117318(57045026, +), CAediting_1117319(57045028, +), CAediting_1117320(57049526, +), CAediting_1117321(57049550, +), CAediting_1117322(57049554, +), CAediting_1117323(57049597, +), CAediting_1117324(57050946, +), CAediting_1117325(57050992, +), CAediting_1117326(57051059, +), CAediting_1117327(57052326, +), CAediting_1117328(57052352, +), CAediting_1117329(57063143, +), CAediting_1117330(57063152, +), CAediting_1117331(57063177, +), CAediting_1117332(57063182, +), CAediting_1117333(57063187, +), CAediting_1117334(57063212, +), CAediting_1117335(57063213, +), CAediting_1117336(57063230, +), CAediting_1117337(57063242, +), CAediting_1117338(57063252, +), CAediting_1117339(57063254, +), CAediting_1117340(57063291, +), CAediting_1117341(57063313, +), CAediting_1117342(57063325, +), CAediting_1117343(57063338, +), CAediting_1117344(57063355, +), CAediting_1117345(57063376, +), CAediting_1117346(57063377, +), CAediting_1117347(57063378, +), CAediting_1117348(57063580, +), CAediting_1117349(57063587, +), CAediting_1117350(57063599, +), CAediting_1117351(57063624, +), CAediting_1117352(57063625, +), CAediting_1117353(57063637, +), CAediting_1117354(57063642, +), CAediting_1117355(57063658, +), CAediting_1117356(57063665, +), CAediting_1117357(57063856, +), CAediting_1117358(57063920, +), CAediting_1117359(57063923, +), CAediting_1117360(57063937, +), CAediting_1117361(57063945, +), CAediting_1117362(57063990, +), CAediting_1117363(57063999, +), CAediting_1117364(57064000, +), CAediting_1117365(57064012, +), CAediting_1117366(57064095, +), CAediting_1117367(57064101, +), CAediting_1117368(57064103, +), CAediting_1117369(57064111, +), CAediting_1117370(57064112, +), CAediting_1117371(57064117, +), CAediting_1117372(57064118, +), CAediting_1117373(57064134, +), CAediting_1117374(57064142, +), CAediting_1117375(57064152, +), CAediting_1117376(57064157, +), CAediting_1117377(57064165, +), CAediting_1117378(57064166, +), CAediting_1117379(57064189, +), CAediting_1117380(57064647, +), CAediting_1117381(57064652, +), CAediting_1117382(57064660, +), CAediting_1117383(57064668, +), CAediting_1117384(57064669, +), CAediting_1117385(57064723, +), CAediting_1117386(57064734, +), CAediting_1117387(57064737, +), CAediting_1117388(57064738, +), CAediting_1117389(57064746, +), CAediting_1117390(57064820, +), CAediting_1117391(57064844, +), CAediting_1117392(57064849, +), CAediting_1117393(57064879, +), CAediting_1117394(57064906, +), CAediting_1117395(57064907, +), CAediting_1117396(57064909, +), CAediting_1117397(57064912, +), CAediting_1117398(57064914, +), CAediting_1117399(57066159, +), CAediting_1117400(57066187, +), CAediting_1117401(57066208, +), CAediting_1117402(57066217, +), CAediting_1117403(57066222, +), CAediting_1117404(57066292, +), CAediting_1117405(57073657, +), CAediting_1117406(57073719, +), CAediting_1117407(57073739, +), CAediting_1117408(57080548, +),

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RNA editing positional annotations for NLRC5 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1117168	chr16_56991548_+	ncRNA_intronic
CAediting_1117169	chr16_56991602_+	ncRNA_intronic
CAediting_1117170	chr16_56992606_+	ncRNA_intronic
CAediting_1117171	chr16_56992616_+	ncRNA_intronic
CAediting_1117172	chr16_56992642_+	ncRNA_intronic
CAediting_1117173	chr16_56992651_+	ncRNA_intronic
CAediting_1117174	chr16_56992657_+	ncRNA_intronic
CAediting_1117175	chr16_56992666_+	ncRNA_intronic
CAediting_1117176	chr16_56992669_+	ncRNA_intronic
CAediting_1117177	chr16_56992739_+	ncRNA_intronic
CAediting_1117178	chr16_56992740_+	ncRNA_intronic
CAediting_1117179	chr16_56992745_+	ncRNA_intronic
CAediting_1117180	chr16_56992768_+	ncRNA_intronic
CAediting_1117181	chr16_56994989_+	ncRNA_intronic
CAediting_1117182	chr16_56994998_+	ncRNA_intronic
CAediting_1117183	chr16_56995031_+	ncRNA_intronic
CAediting_1117184	chr16_56995053_+	ncRNA_intronic
CAediting_1117185	chr16_56995054_+	ncRNA_intronic
CAediting_1117186	chr16_56995063_+	ncRNA_intronic
CAediting_1117187	chr16_56995080_+	ncRNA_intronic
CAediting_1117188	chr16_56995085_+	ncRNA_intronic
CAediting_1117189	chr16_56995086_+	ncRNA_intronic
CAediting_1117190	chr16_56995095_+	ncRNA_intronic
CAediting_1117191	chr16_56996277_+	ncRNA_intronic
CAediting_1117192	chr16_56996303_+	ncRNA_intronic
CAediting_1117193	chr16_56996307_+	ncRNA_intronic
CAediting_1117194	chr16_56996317_+	ncRNA_intronic
CAediting_1117195	chr16_56996327_+	ncRNA_intronic
CAediting_1117196	chr16_56996395_+	ncRNA_intronic
CAediting_1117197	chr16_56996424_+	ncRNA_intronic
CAediting_1117198	chr16_56996448_+	ncRNA_intronic
CAediting_1117199	chr16_56996969_+	ncRNA_intronic
CAediting_1117200	chr16_56997134_+	ncRNA_intronic
CAediting_1117201	chr16_56997146_+	ncRNA_intronic
CAediting_1117202	chr16_57002277_+	ncRNA_intronic
CAediting_1117203	chr16_57003085_+	ncRNA_intronic
CAediting_1117204	chr16_57003188_+	ncRNA_intronic
CAediting_1117205	chr16_57003302_+	ncRNA_intronic
CAediting_1117206	chr16_57004305_+	ncRNA_intronic
CAediting_1117207	chr16_57004364_+	ncRNA_intronic
CAediting_1117208	chr16_57005381_+	ncRNA_intronic
CAediting_1117209	chr16_57005397_+	ncRNA_intronic
CAediting_1117210	chr16_57005404_+	ncRNA_intronic
CAediting_1117211	chr16_57005410_+	ncRNA_intronic
CAediting_1117212	chr16_57005425_+	ncRNA_intronic
CAediting_1117213	chr16_57005426_+	ncRNA_intronic
CAediting_1117214	chr16_57005430_+	ncRNA_intronic
CAediting_1117215	chr16_57005472_+	ncRNA_intronic
CAediting_1117216	chr16_57005733_+	ncRNA_intronic
CAediting_1117217	chr16_57005741_+	ncRNA_intronic
CAediting_1117218	chr16_57005742_+	ncRNA_intronic
CAediting_1117219	chr16_57005743_+	ncRNA_intronic
CAediting_1117220	chr16_57005756_+	ncRNA_intronic
CAediting_1117221	chr16_57005759_+	ncRNA_intronic
CAediting_1117222	chr16_57005760_+	ncRNA_intronic
CAediting_1117223	chr16_57005761_+	ncRNA_intronic
CAediting_1117224	chr16_57005763_+	ncRNA_intronic
CAediting_1117225	chr16_57005769_+	ncRNA_intronic
CAediting_1117226	chr16_57005770_+	ncRNA_intronic
CAediting_1117227	chr16_57005773_+	ncRNA_intronic
CAediting_1117228	chr16_57005799_+	ncRNA_intronic
CAediting_1117229	chr16_57005839_+	ncRNA_intronic
CAediting_1117230	chr16_57005840_+	ncRNA_intronic
CAediting_1117231	chr16_57005845_+	ncRNA_intronic
CAediting_1117232	chr16_57005875_+	ncRNA_intronic
CAediting_1117233	chr16_57006021_+	ncRNA_intronic
CAediting_1117234	chr16_57006116_+	ncRNA_intronic
CAediting_1117235	chr16_57006128_+	ncRNA_intronic
CAediting_1117236	chr16_57006173_+	ncRNA_intronic
CAediting_1117237	chr16_57006183_+	ncRNA_intronic
CAediting_1117238	chr16_57006204_+	ncRNA_intronic
CAediting_1117239	chr16_57006219_+	ncRNA_intronic
CAediting_1117240	chr16_57006220_+	ncRNA_intronic
CAediting_1117241	chr16_57006260_+	ncRNA_intronic
CAediting_1117242	chr16_57006261_+	ncRNA_intronic
CAediting_1117243	chr16_57006442_+	ncRNA_intronic
CAediting_1117244	chr16_57007473_+	ncRNA_intronic
CAediting_1117245	chr16_57007584_+	ncRNA_intronic
CAediting_1117246	chr16_57007591_+	ncRNA_intronic
CAediting_1117247	chr16_57007610_+	ncRNA_intronic
CAediting_1117248	chr16_57007635_+	ncRNA_intronic
CAediting_1117249	chr16_57007649_+	ncRNA_intronic
CAediting_1117250	chr16_57007664_+	ncRNA_intronic
CAediting_1117251	chr16_57008126_+	ncRNA_intronic
CAediting_1117252	chr16_57009500_+	ncRNA_intronic
CAediting_1117253	chr16_57010478_+	ncRNA_intronic
CAediting_1117254	chr16_57010503_+	ncRNA_intronic
CAediting_1117255	chr16_57010572_+	ncRNA_intronic
CAediting_1117256	chr16_57010577_+	ncRNA_intronic
CAediting_1117257	chr16_57010583_+	ncRNA_intronic
CAediting_1117258	chr16_57010620_+	ncRNA_intronic
CAediting_1117259	chr16_57010647_+	ncRNA_intronic
CAediting_1117260	chr16_57011262_+	ncRNA_intronic
CAediting_1117261	chr16_57011290_+	ncRNA_intronic
CAediting_1117262	chr16_57011293_+	ncRNA_intronic
CAediting_1117263	chr16_57011306_+	ncRNA_intronic
CAediting_1117264	chr16_57011376_+	ncRNA_intronic
CAediting_1117265	chr16_57011388_+	ncRNA_intronic
CAediting_1117266	chr16_57011508_+	ncRNA_intronic
CAediting_1117267	chr16_57011521_+	ncRNA_intronic
CAediting_1117268	chr16_57011561_+	ncRNA_intronic
CAediting_1117269	chr16_57011571_+	ncRNA_intronic
CAediting_1117270	chr16_57011572_+	ncRNA_intronic
CAediting_1117271	chr16_57011575_+	ncRNA_intronic
CAediting_1117272	chr16_57011583_+	ncRNA_intronic
CAediting_1117273	chr16_57011615_+	ncRNA_intronic
CAediting_1117274	chr16_57011628_+	ncRNA_intronic
CAediting_1117275	chr16_57011637_+	ncRNA_intronic
CAediting_1117276	chr16_57011643_+	ncRNA_intronic
CAediting_1117277	chr16_57011670_+	ncRNA_intronic
CAediting_1117278	chr16_57011673_+	ncRNA_intronic
CAediting_1117279	chr16_57015028_+	ncRNA_intronic
CAediting_1117280	chr16_57015101_+	ncRNA_intronic
CAediting_1117281	chr16_57015112_+	ncRNA_intronic
CAediting_1117282	chr16_57015149_+	ncRNA_intronic
CAediting_1117283	chr16_57015172_+	ncRNA_intronic
CAediting_1117284	chr16_57015714_+	ncRNA_intronic
CAediting_1117285	chr16_57015727_+	ncRNA_intronic
CAediting_1117286	chr16_57015738_+	ncRNA_intronic
CAediting_1117287	chr16_57015775_+	ncRNA_intronic
CAediting_1117288	chr16_57015777_+	ncRNA_intronic
CAediting_1117289	chr16_57015780_+	ncRNA_intronic
CAediting_1117290	chr16_57015807_+	ncRNA_intronic
CAediting_1117291	chr16_57015832_+	ncRNA_intronic
CAediting_1117292	chr16_57015833_+	ncRNA_intronic
CAediting_1117293	chr16_57016001_+	ncRNA_intronic
CAediting_1117294	chr16_57016014_+	ncRNA_intronic
CAediting_1117295	chr16_57016094_+	ncRNA_intronic
CAediting_1117296	chr16_57016095_+	ncRNA_intronic
CAediting_1117297	chr16_57016140_+	ncRNA_intronic
CAediting_1117298	chr16_57016168_+	ncRNA_intronic
CAediting_1117299	chr16_57021606_+	intronic
CAediting_1117300	chr16_57034484_+	intronic
CAediting_1117301	chr16_57034485_+	intronic
CAediting_1117302	chr16_57038312_+	intronic
CAediting_1117303	chr16_57038361_+	intronic
CAediting_1117304	chr16_57038422_+	intronic
CAediting_1117305	chr16_57038526_+	intronic
CAediting_1117306	chr16_57038725_+	intronic
CAediting_1117307	chr16_57038784_+	intronic
CAediting_1117308	chr16_57044226_+	ncRNA_intronic
CAediting_1117309	chr16_57044230_+	ncRNA_intronic
CAediting_1117310	chr16_57044238_+	ncRNA_intronic
CAediting_1117311	chr16_57044317_+	ncRNA_intronic
CAediting_1117312	chr16_57044649_+	ncRNA_intronic
CAediting_1117313	chr16_57044650_+	ncRNA_intronic
CAediting_1117314	chr16_57044658_+	ncRNA_intronic
CAediting_1117315	chr16_57044849_+	ncRNA_intronic
CAediting_1117316	chr16_57044912_+	ncRNA_intronic
CAediting_1117317	chr16_57045021_+	ncRNA_intronic
CAediting_1117318	chr16_57045026_+	ncRNA_intronic
CAediting_1117319	chr16_57045028_+	ncRNA_intronic
CAediting_1117320	chr16_57049526_+	ncRNA_intronic
CAediting_1117321	chr16_57049550_+	ncRNA_intronic
CAediting_1117322	chr16_57049554_+	ncRNA_intronic
CAediting_1117323	chr16_57049597_+	ncRNA_intronic
CAediting_1117324	chr16_57050946_+	ncRNA_intronic
CAediting_1117325	chr16_57050992_+	ncRNA_intronic
CAediting_1117326	chr16_57051059_+	ncRNA_intronic
CAediting_1117327	chr16_57052326_+	ncRNA_intronic
CAediting_1117328	chr16_57052352_+	ncRNA_intronic
CAediting_1117329	chr16_57063143_+	intronic
CAediting_1117330	chr16_57063152_+	intronic
CAediting_1117331	chr16_57063177_+	intronic
CAediting_1117332	chr16_57063182_+	intronic
CAediting_1117333	chr16_57063187_+	intronic
CAediting_1117334	chr16_57063212_+	intronic
CAediting_1117335	chr16_57063213_+	intronic
CAediting_1117336	chr16_57063230_+	intronic
CAediting_1117337	chr16_57063242_+	intronic
CAediting_1117338	chr16_57063252_+	intronic
CAediting_1117339	chr16_57063254_+	intronic
CAediting_1117340	chr16_57063291_+	intronic
CAediting_1117341	chr16_57063313_+	intronic
CAediting_1117342	chr16_57063325_+	intronic
CAediting_1117343	chr16_57063338_+	intronic
CAediting_1117344	chr16_57063355_+	intronic
CAediting_1117345	chr16_57063376_+	intronic
CAediting_1117346	chr16_57063377_+	intronic
CAediting_1117347	chr16_57063378_+	intronic
CAediting_1117348	chr16_57063580_+	intronic
CAediting_1117349	chr16_57063587_+	intronic
CAediting_1117350	chr16_57063599_+	intronic
CAediting_1117351	chr16_57063624_+	intronic
CAediting_1117352	chr16_57063625_+	intronic
CAediting_1117353	chr16_57063637_+	intronic
CAediting_1117354	chr16_57063642_+	intronic
CAediting_1117355	chr16_57063658_+	intronic
CAediting_1117356	chr16_57063665_+	intronic
CAediting_1117357	chr16_57063856_+	intronic
CAediting_1117358	chr16_57063920_+	intronic
CAediting_1117359	chr16_57063923_+	intronic
CAediting_1117360	chr16_57063937_+	intronic
CAediting_1117361	chr16_57063945_+	intronic
CAediting_1117362	chr16_57063990_+	intronic
CAediting_1117363	chr16_57063999_+	intronic
CAediting_1117364	chr16_57064000_+	intronic
CAediting_1117365	chr16_57064012_+	intronic
CAediting_1117366	chr16_57064095_+	intronic
CAediting_1117367	chr16_57064101_+	intronic
CAediting_1117368	chr16_57064103_+	intronic
CAediting_1117369	chr16_57064111_+	intronic
CAediting_1117370	chr16_57064112_+	intronic
CAediting_1117371	chr16_57064117_+	intronic
CAediting_1117372	chr16_57064118_+	intronic
CAediting_1117373	chr16_57064134_+	intronic
CAediting_1117374	chr16_57064142_+	intronic
CAediting_1117375	chr16_57064152_+	intronic
CAediting_1117376	chr16_57064157_+	intronic
CAediting_1117377	chr16_57064165_+	intronic
CAediting_1117378	chr16_57064166_+	intronic
CAediting_1117379	chr16_57064189_+	intronic
CAediting_1117380	chr16_57064647_+	intronic
CAediting_1117381	chr16_57064652_+	intronic
CAediting_1117382	chr16_57064660_+	intronic
CAediting_1117383	chr16_57064668_+	intronic
CAediting_1117384	chr16_57064669_+	intronic
CAediting_1117385	chr16_57064723_+	intronic
CAediting_1117386	chr16_57064734_+	intronic
CAediting_1117387	chr16_57064737_+	intronic
CAediting_1117388	chr16_57064738_+	intronic
CAediting_1117389	chr16_57064746_+	intronic
CAediting_1117390	chr16_57064820_+	intronic
CAediting_1117391	chr16_57064844_+	intronic
CAediting_1117392	chr16_57064849_+	intronic
CAediting_1117393	chr16_57064879_+	intronic
CAediting_1117394	chr16_57064906_+	intronic
CAediting_1117395	chr16_57064907_+	intronic
CAediting_1117396	chr16_57064909_+	intronic
CAediting_1117397	chr16_57064912_+	intronic
CAediting_1117398	chr16_57064914_+	intronic
CAediting_1117399	chr16_57066159_+	intronic
CAediting_1117400	chr16_57066187_+	intronic
CAediting_1117401	chr16_57066208_+	intronic
CAediting_1117402	chr16_57066217_+	intronic
CAediting_1117403	chr16_57066222_+	intronic
CAediting_1117404	chr16_57066292_+	intronic
CAediting_1117405	chr16_57073657_+	intronic
CAediting_1117406	chr16_57073719_+	intronic
CAediting_1117407	chr16_57073739_+	intronic
CAediting_1117408	chr16_57080548_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1117168	chr16_56991548_+	SINE	Alu	AluSx1
CAediting_1117169	chr16_56991602_+	SINE	Alu	AluSx1
CAediting_1117170	chr16_56992606_+	SINE	Alu	AluSx1
CAediting_1117171	chr16_56992616_+	SINE	Alu	AluSx1
CAediting_1117172	chr16_56992642_+	SINE	Alu	AluSx1
CAediting_1117173	chr16_56992651_+	SINE	Alu	AluSx1
CAediting_1117174	chr16_56992657_+	SINE	Alu	AluSx1
CAediting_1117175	chr16_56992666_+	SINE	Alu	AluSx1
CAediting_1117176	chr16_56992669_+	SINE	Alu	AluSx1
CAediting_1117177	chr16_56992739_+	SINE	Alu	AluSx1
CAediting_1117178	chr16_56992740_+	SINE	Alu	AluSx1
CAediting_1117179	chr16_56992745_+	SINE	Alu	AluSx1
CAediting_1117180	chr16_56992768_+	SINE	Alu	AluSx1
CAediting_1117181	chr16_56994989_+	SINE	Alu	AluSz
CAediting_1117182	chr16_56994998_+	SINE	Alu	AluSz
CAediting_1117183	chr16_56995031_+	SINE	Alu	AluSz
CAediting_1117184	chr16_56995053_+	SINE	Alu	AluSz
CAediting_1117185	chr16_56995054_+	SINE	Alu	AluSz
CAediting_1117186	chr16_56995063_+	SINE	Alu	AluSz
CAediting_1117187	chr16_56995080_+	SINE	Alu	AluSz
CAediting_1117188	chr16_56995085_+	SINE	Alu	AluSz
CAediting_1117189	chr16_56995086_+	SINE	Alu	AluSz
CAediting_1117190	chr16_56995095_+	SINE	Alu	AluSz
CAediting_1117191	chr16_56996277_+	SINE	Alu	AluJo
CAediting_1117192	chr16_56996303_+	SINE	Alu	AluJo
CAediting_1117193	chr16_56996307_+	SINE	Alu	AluJo
CAediting_1117194	chr16_56996317_+	SINE	Alu	AluJo
CAediting_1117195	chr16_56996327_+	SINE	Alu	AluJo
CAediting_1117196	chr16_56996395_+	SINE	Alu	AluJo
CAediting_1117197	chr16_56996424_+	SINE	Alu	AluJo
CAediting_1117198	chr16_56996448_+	SINE	Alu	AluJo
CAediting_1117199	chr16_56996969_+	SINE	Alu	AluJb
CAediting_1117200	chr16_56997134_+	SINE	Alu	AluJb
CAediting_1117201	chr16_56997146_+	SINE	Alu	AluJb
CAediting_1117202	chr16_57002277_+	SINE	Alu	AluSx
CAediting_1117203	chr16_57003085_+	SINE	Alu	AluSx1
CAediting_1117204	chr16_57003188_+	SINE	Alu	AluSx1
CAediting_1117205	chr16_57003302_+	SINE	Alu	AluSx1
CAediting_1117206	chr16_57004305_+	SINE	Alu	AluJr
CAediting_1117207	chr16_57004364_+	SINE	Alu	AluJr
CAediting_1117208	chr16_57005381_+	SINE	Alu	FLAM_C
CAediting_1117209	chr16_57005397_+	SINE	Alu	FLAM_C
CAediting_1117210	chr16_57005404_+	SINE	Alu	FLAM_C
CAediting_1117211	chr16_57005410_+	SINE	Alu	FLAM_C
CAediting_1117212	chr16_57005425_+	SINE	Alu	FLAM_C
CAediting_1117213	chr16_57005426_+	SINE	Alu	FLAM_C
CAediting_1117214	chr16_57005430_+	SINE	Alu	FLAM_C
CAediting_1117215	chr16_57005472_+	SINE	Alu	FLAM_C
CAediting_1117216	chr16_57005733_+	SINE	Alu	AluJb
CAediting_1117217	chr16_57005741_+	SINE	Alu	AluJb
CAediting_1117218	chr16_57005742_+	SINE	Alu	AluJb
CAediting_1117219	chr16_57005743_+	SINE	Alu	AluJb
CAediting_1117220	chr16_57005756_+	SINE	Alu	AluJb
CAediting_1117221	chr16_57005759_+	SINE	Alu	AluJb
CAediting_1117222	chr16_57005760_+	SINE	Alu	AluJb
CAediting_1117223	chr16_57005761_+	SINE	Alu	AluJb
CAediting_1117224	chr16_57005763_+	SINE	Alu	AluJb
CAediting_1117225	chr16_57005769_+	SINE	Alu	AluJb
CAediting_1117226	chr16_57005770_+	SINE	Alu	AluJb
CAediting_1117227	chr16_57005773_+	SINE	Alu	AluJb
CAediting_1117228	chr16_57005799_+	SINE	Alu	AluJb
CAediting_1117229	chr16_57005839_+	SINE	Alu	AluJb
CAediting_1117230	chr16_57005840_+	SINE	Alu	AluJb
CAediting_1117231	chr16_57005845_+	SINE	Alu	AluJb
CAediting_1117232	chr16_57005875_+	SINE	Alu	AluJb
CAediting_1117233	chr16_57006021_+	SINE	Alu	AluJb
CAediting_1117234	chr16_57006116_+	SINE	Alu	AluJb
CAediting_1117235	chr16_57006128_+	SINE	Alu	AluJb
CAediting_1117236	chr16_57006173_+	SINE	Alu	AluJb
CAediting_1117237	chr16_57006183_+	SINE	Alu	AluJb
CAediting_1117238	chr16_57006204_+	SINE	Alu	AluJb
CAediting_1117239	chr16_57006219_+	SINE	Alu	AluJb
CAediting_1117240	chr16_57006220_+	SINE	Alu	AluJb
CAediting_1117241	chr16_57006260_+	SINE	Alu	AluJb
CAediting_1117242	chr16_57006261_+	SINE	Alu	AluJb
CAediting_1117243	chr16_57006442_+	SINE	Alu	AluJb
CAediting_1117244	chr16_57007473_+	SINE	Alu	AluSx
CAediting_1117245	chr16_57007584_+	SINE	Alu	AluSx
CAediting_1117246	chr16_57007591_+	SINE	Alu	AluSx
CAediting_1117247	chr16_57007610_+	SINE	Alu	AluSx
CAediting_1117248	chr16_57007635_+	SINE	Alu	AluSx
CAediting_1117249	chr16_57007649_+	SINE	Alu	AluSx
CAediting_1117250	chr16_57007664_+	SINE	Alu	AluSx
CAediting_1117251	chr16_57008126_+	SINE	Alu	AluJo
CAediting_1117252	chr16_57009500_+	SINE	Alu	AluY
CAediting_1117253	chr16_57010478_+	SINE	Alu	AluJo
CAediting_1117254	chr16_57010503_+	SINE	Alu	AluJo
CAediting_1117255	chr16_57010572_+	SINE	Alu	AluJo
CAediting_1117256	chr16_57010577_+	SINE	Alu	AluJo
CAediting_1117257	chr16_57010583_+	SINE	Alu	AluJo
CAediting_1117258	chr16_57010620_+	SINE	Alu	AluJo
CAediting_1117259	chr16_57010647_+	SINE	Alu	AluJo
CAediting_1117260	chr16_57011262_+	SINE	Alu	AluSx1
CAediting_1117261	chr16_57011290_+	SINE	Alu	AluSx1
CAediting_1117262	chr16_57011293_+	SINE	Alu	AluSx1
CAediting_1117263	chr16_57011306_+	SINE	Alu	AluSx1
CAediting_1117264	chr16_57011376_+	SINE	Alu	AluSx1
CAediting_1117265	chr16_57011388_+	SINE	Alu	AluSx1
CAediting_1117266	chr16_57011508_+	SINE	Alu	AluJo
CAediting_1117267	chr16_57011521_+	SINE	Alu	AluJo
CAediting_1117268	chr16_57011561_+	SINE	Alu	AluJo
CAediting_1117269	chr16_57011571_+	SINE	Alu	AluJo
CAediting_1117270	chr16_57011572_+	SINE	Alu	AluJo
CAediting_1117271	chr16_57011575_+	SINE	Alu	AluJo
CAediting_1117272	chr16_57011583_+	SINE	Alu	AluJo
CAediting_1117273	chr16_57011615_+	SINE	Alu	AluJo
CAediting_1117274	chr16_57011628_+	SINE	Alu	AluJo
CAediting_1117275	chr16_57011637_+	SINE	Alu	AluJo
CAediting_1117276	chr16_57011643_+	SINE	Alu	AluJo
CAediting_1117277	chr16_57011670_+	SINE	Alu	AluJo
CAediting_1117278	chr16_57011673_+	SINE	Alu	AluJo
CAediting_1117279	chr16_57015028_+	SINE	Alu	AluSx1
CAediting_1117280	chr16_57015101_+	SINE	Alu	AluSx1
CAediting_1117281	chr16_57015112_+	SINE	Alu	AluSx1
CAediting_1117282	chr16_57015149_+	SINE	Alu	AluSx1
CAediting_1117283	chr16_57015172_+	SINE	Alu	AluSx1
CAediting_1117284	chr16_57015714_+	SINE	Alu	AluSp
CAediting_1117285	chr16_57015727_+	SINE	Alu	AluSp
CAediting_1117286	chr16_57015738_+	SINE	Alu	AluSp
CAediting_1117287	chr16_57015775_+	SINE	Alu	AluSp
CAediting_1117288	chr16_57015777_+	SINE	Alu	AluSp
CAediting_1117289	chr16_57015780_+	SINE	Alu	AluSp
CAediting_1117290	chr16_57015807_+	SINE	Alu	AluSp
CAediting_1117291	chr16_57015832_+	SINE	Alu	AluSp
CAediting_1117292	chr16_57015833_+	SINE	Alu	AluSp
CAediting_1117293	chr16_57016001_+	SINE	Alu	AluSz
CAediting_1117294	chr16_57016014_+	SINE	Alu	AluSz
CAediting_1117295	chr16_57016094_+	SINE	Alu	AluSz
CAediting_1117296	chr16_57016095_+	SINE	Alu	AluSz
CAediting_1117297	chr16_57016140_+	SINE	Alu	AluSz
CAediting_1117298	chr16_57016168_+	SINE	Alu	AluSz
CAediting_1117299	chr16_57021606_+	SINE	Alu	AluJr
CAediting_1117300	chr16_57034484_+	SINE	MIR	MIR
CAediting_1117301	chr16_57034485_+	SINE	MIR	MIR
CAediting_1117302	chr16_57038312_+	SINE	Alu	AluJo
CAediting_1117303	chr16_57038361_+	SINE	Alu	AluJo
CAediting_1117304	chr16_57038422_+	SINE	Alu	AluJo
CAediting_1117305	chr16_57038526_+	SINE	Alu	AluJo
CAediting_1117306	chr16_57038725_+	SINE	Alu	AluSx
CAediting_1117307	chr16_57038784_+	SINE	Alu	AluSx
CAediting_1117308	chr16_57044226_+	SINE	Alu	AluSx1
CAediting_1117309	chr16_57044230_+	SINE	Alu	AluSx1
CAediting_1117310	chr16_57044238_+	SINE	Alu	AluSx1
CAediting_1117311	chr16_57044317_+	SINE	Alu	AluSx1
CAediting_1117312	chr16_57044649_+	SINE	Alu	AluJb
CAediting_1117313	chr16_57044650_+	SINE	Alu	AluJb
CAediting_1117314	chr16_57044658_+	SINE	Alu	AluJb
CAediting_1117315	chr16_57044849_+	SINE	Alu	AluJb
CAediting_1117316	chr16_57044912_+	SINE	Alu	AluJb
CAediting_1117317	chr16_57045021_+	SINE	Alu	AluJb
CAediting_1117318	chr16_57045026_+	SINE	Alu	AluJb
CAediting_1117319	chr16_57045028_+	SINE	Alu	AluJb
CAediting_1117320	chr16_57049526_+	SINE	Alu	AluSg
CAediting_1117321	chr16_57049550_+	SINE	Alu	AluSg
CAediting_1117322	chr16_57049554_+	SINE	Alu	AluSg
CAediting_1117323	chr16_57049597_+	SINE	Alu	AluSg
CAediting_1117324	chr16_57050946_+	SINE	Alu	AluSx
CAediting_1117325	chr16_57050992_+	SINE	Alu	AluSx
CAediting_1117326	chr16_57051059_+	SINE	Alu	AluSx
CAediting_1117327	chr16_57052326_+	SINE	Alu	AluSq2
CAediting_1117328	chr16_57052352_+	SINE	Alu	AluSq2
CAediting_1117329	chr16_57063143_+	SINE	Alu	AluSq2
CAediting_1117330	chr16_57063152_+	SINE	Alu	AluSq2
CAediting_1117331	chr16_57063177_+	SINE	Alu	AluSq2
CAediting_1117332	chr16_57063182_+	SINE	Alu	AluSq2
CAediting_1117333	chr16_57063187_+	SINE	Alu	AluSq2
CAediting_1117334	chr16_57063212_+	SINE	Alu	AluSq2
CAediting_1117335	chr16_57063213_+	SINE	Alu	AluSq2
CAediting_1117336	chr16_57063230_+	SINE	Alu	AluSq2
CAediting_1117337	chr16_57063242_+	SINE	Alu	AluSq2
CAediting_1117338	chr16_57063252_+	SINE	Alu	AluSq2
CAediting_1117339	chr16_57063254_+	SINE	Alu	AluSq2
CAediting_1117340	chr16_57063291_+	SINE	Alu	AluSq2
CAediting_1117341	chr16_57063313_+	SINE	Alu	AluSq2
CAediting_1117342	chr16_57063325_+	SINE	Alu	AluSq2
CAediting_1117343	chr16_57063338_+	SINE	Alu	AluSq2
CAediting_1117344	chr16_57063355_+	SINE	Alu	AluSq2
CAediting_1117345	chr16_57063376_+	SINE	Alu	AluSq2
CAediting_1117346	chr16_57063377_+	SINE	Alu	AluSq2
CAediting_1117347	chr16_57063378_+	SINE	Alu	AluSq2
CAediting_1117348	chr16_57063580_+	SINE	Alu	AluJo
CAediting_1117349	chr16_57063587_+	SINE	Alu	AluJo
CAediting_1117350	chr16_57063599_+	SINE	Alu	AluJo
CAediting_1117351	chr16_57063624_+	SINE	Alu	AluJo
CAediting_1117352	chr16_57063625_+	SINE	Alu	AluJo
CAediting_1117353	chr16_57063637_+	SINE	Alu	AluJo
CAediting_1117354	chr16_57063642_+	SINE	Alu	AluJo
CAediting_1117355	chr16_57063658_+	SINE	Alu	AluJo
CAediting_1117356	chr16_57063665_+	SINE	Alu	AluJo
CAediting_1117357	chr16_57063856_+	SINE	Alu	AluY
CAediting_1117358	chr16_57063920_+	SINE	Alu	AluY
CAediting_1117359	chr16_57063923_+	SINE	Alu	AluY
CAediting_1117360	chr16_57063937_+	SINE	Alu	AluY
CAediting_1117361	chr16_57063945_+	SINE	Alu	AluY
CAediting_1117362	chr16_57063990_+	SINE	Alu	AluY
CAediting_1117363	chr16_57063999_+	SINE	Alu	AluY
CAediting_1117364	chr16_57064000_+	SINE	Alu	AluY
CAediting_1117365	chr16_57064012_+	SINE	Alu	AluY
CAediting_1117366	chr16_57064095_+	SINE	Alu	AluJb
CAediting_1117367	chr16_57064101_+	SINE	Alu	AluJb
CAediting_1117368	chr16_57064103_+	SINE	Alu	AluJb
CAediting_1117369	chr16_57064111_+	SINE	Alu	AluJb
CAediting_1117370	chr16_57064112_+	SINE	Alu	AluJb
CAediting_1117371	chr16_57064117_+	SINE	Alu	AluJb
CAediting_1117372	chr16_57064118_+	SINE	Alu	AluJb
CAediting_1117373	chr16_57064134_+	SINE	Alu	AluJb
CAediting_1117374	chr16_57064142_+	SINE	Alu	AluJb
CAediting_1117375	chr16_57064152_+	SINE	Alu	AluJb
CAediting_1117376	chr16_57064157_+	SINE	Alu	AluJb
CAediting_1117377	chr16_57064165_+	SINE	Alu	AluJb
CAediting_1117378	chr16_57064166_+	SINE	Alu	AluJb
CAediting_1117379	chr16_57064189_+	SINE	Alu	AluJb
CAediting_1117380	chr16_57064647_+	SINE	Alu	AluSq2
CAediting_1117381	chr16_57064652_+	SINE	Alu	AluSq2
CAediting_1117382	chr16_57064660_+	SINE	Alu	AluSq2
CAediting_1117383	chr16_57064668_+	SINE	Alu	AluSq2
CAediting_1117384	chr16_57064669_+	SINE	Alu	AluSq2
CAediting_1117385	chr16_57064723_+	SINE	Alu	AluSq2
CAediting_1117386	chr16_57064734_+	SINE	Alu	AluSq2
CAediting_1117387	chr16_57064737_+	SINE	Alu	AluSq2
CAediting_1117388	chr16_57064738_+	SINE	Alu	AluSq2
CAediting_1117389	chr16_57064746_+	SINE	Alu	AluSq2
CAediting_1117390	chr16_57064820_+	SINE	Alu	AluSq2
CAediting_1117391	chr16_57064844_+	SINE	Alu	AluSq2
CAediting_1117392	chr16_57064849_+	SINE	Alu	AluSq2
CAediting_1117393	chr16_57064879_+	SINE	Alu	AluSq2
CAediting_1117394	chr16_57064906_+	SINE	Alu	AluSq2
CAediting_1117395	chr16_57064907_+	SINE	Alu	AluSq2
CAediting_1117396	chr16_57064909_+	SINE	Alu	AluSq2
CAediting_1117397	chr16_57064912_+	SINE	Alu	AluSq2
CAediting_1117398	chr16_57064914_+	SINE	Alu	AluSq2
CAediting_1117399	chr16_57066159_+	SINE	Alu	AluJo
CAediting_1117400	chr16_57066187_+	SINE	Alu	AluJo
CAediting_1117401	chr16_57066208_+	SINE	Alu	AluJo
CAediting_1117402	chr16_57066217_+	SINE	Alu	AluJo
CAediting_1117403	chr16_57066222_+	SINE	Alu	AluJo
CAediting_1117404	chr16_57066292_+	SINE	Alu	AluJo
CAediting_1117405	chr16_57073657_+	SINE	Alu	AluSx
CAediting_1117406	chr16_57073719_+	SINE	Alu	AluSx
CAediting_1117407	chr16_57073739_+	SINE	Alu	AluSx
CAediting_1117408	chr16_57080548_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for NLRC5

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000140853.14.NLRC5.

Correlation between RNA A-to-I editing and PSI for ENSG00000140853.14.NLRC5.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NLRC5

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NLRC5

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NLRC5

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000140853.14	ENST00000539881	hsa-miR-605-3p	57040681	57040687	7mer-m8	57040667	57040688	148	-20.26
CAediting_688080	chr9_63819626_+	ENSG00000140853.14	ENST00000539881	hsa-miR-4477b	57047991	57047997	7mer-m8	57047973	57047998	143	-12.37
CAediting_1160181	chr17_7017644_-	ENSG00000140853.14	ENST00000539881	hsa-miR-195-3p	57029809	57029815	7mer-m8	57029797	57029816	149	-10.83
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000539881	hsa-miR-197-5p	57034712	57034717	6mer	57034705	57034727	141	-29.69
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000539881	hsa-miR-3654	57034785	57034791	7mer-m8	57034776	57034792	146	-20.57
CAediting_1351755	chr19_40282625_-	ENSG00000140853.14	ENST00000539881	hsa-miR-641	57047818	57047824	7mer-m8	57047802	57047825	141	-13.44
CAediting_396018	chr5_1062918_-	ENSG00000140853.14	ENST00000539881	hsa-miR-4635	57047992	57047998	7mer-m8	57047979	57047999	140	-15.77
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000262510	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000262510	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000262510	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000539144	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000539144	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000539144	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000545081	hsa-miR-3654	57066561	57066567	7mer-m8	57066547	57066568	153	-24.62
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000545081	hsa-miR-3654	57077326	57077333	8mer-1a	57077313	57077333	147	-17.83
CAediting_1054808	chr15_66496985_-	ENSG00000140853.14	ENST00000545081	hsa-miR-4512	57082508	57082514	7mer-m8	57082494	57082515	140	-16.73
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000545081	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000545081	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_396018	chr5_1062918_-	ENSG00000140853.14	ENST00000545081	hsa-miR-4635	57082534	57082541	8mer-1a	57082521	57082541	140	-15.13
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000545081	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000538453	hsa-miR-3654	57077326	57077333	8mer-1a	57077313	57077333	147	-17.83
CAediting_1054808	chr15_66496985_-	ENSG00000140853.14	ENST00000538453	hsa-miR-4512	57082508	57082514	7mer-m8	57082494	57082515	140	-16.73
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000538453	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000538453	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_396018	chr5_1062918_-	ENSG00000140853.14	ENST00000538453	hsa-miR-4635	57082534	57082541	8mer-1a	57082521	57082541	140	-15.13
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000538453	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000540182	hsa-miR-3654	57066561	57066567	7mer-m8	57066547	57066568	153	-24.62
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000540182	hsa-miR-3654	57077326	57077333	8mer-1a	57077313	57077333	147	-17.83
CAediting_1054808	chr15_66496985_-	ENSG00000140853.14	ENST00000540182	hsa-miR-4512	57082508	57082514	7mer-m8	57082494	57082515	140	-16.73
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000540182	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000540182	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_396018	chr5_1062918_-	ENSG00000140853.14	ENST00000540182	hsa-miR-4635	57082534	57082541	8mer-1a	57082521	57082541	140	-15.13
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000540182	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000537056	hsa-miR-3654	57066561	57066567	7mer-m8	57066547	57066568	153	-24.62
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000537056	hsa-miR-3654	57077326	57077333	8mer-1a	57077313	57077333	147	-17.83
CAediting_1054808	chr15_66496985_-	ENSG00000140853.14	ENST00000537056	hsa-miR-4512	57082508	57082514	7mer-m8	57082494	57082515	140	-16.73
CAediting_86358	chr1_109598906_+	ENSG00000140853.14	ENST00000537056	hsa-miR-197-5p	57082641	57082648	8mer-1a	57082626	57082648	158	-25.59
CAediting_1399425	chr20_1392958_-	ENSG00000140853.14	ENST00000537056	hsa-miR-6869-5p	57083197	57083203	7mer-m8	57083179	57083204	142	-22.02
CAediting_396018	chr5_1062918_-	ENSG00000140853.14	ENST00000537056	hsa-miR-4635	57082534	57082541	8mer-1a	57082521	57082541	140	-15.13
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000537056	hsa-miR-3654	57083376	57083382	7mer-m8	57083361	57083383	142	-18.9
CAediting_604450	chr7_133034877_-	ENSG00000140853.14	ENST00000545349	hsa-miR-3654	57077326	57077333	8mer-1a	57077313	57077333	147	-17.83
CAediting_1524209	chrX_134546392_-	ENSG00000140853.14	ENST00000545081	hsa-miR-503-5p	57081148	57081153	6mer	57081129	57081154	144	-31.48
CAediting_1524209	chrX_134546392_-	ENSG00000140853.14	ENST00000538453	hsa-miR-503-5p	57081148	57081153	6mer	57081129	57081154	144	-31.48
CAediting_1524209	chrX_134546392_-	ENSG00000140853.14	ENST00000540182	hsa-miR-503-5p	57081148	57081153	6mer	57081129	57081154	144	-31.48
CAediting_1524209	chrX_134546392_-	ENSG00000140853.14	ENST00000537056	hsa-miR-503-5p	57081148	57081153	6mer	57081129	57081154	144	-31.48

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000140853.14	ENST00000539881	hsa-miR-4512	57034227	57034233	7mer-m8	57034213	57034234	154	-17.85
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000262510	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000539144	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000545081	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000538453	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000540182	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4
CAediting_524911	chr7_5495852_-	ENSG00000140853.14	ENST00000537056	hsa-miR-589-3p	57082874	57082880	7mer-m8	57082858	57082881	155	-19.4

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NLRC5

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NLRC5

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1117292	chr16_57015833_+	.	.	0.0123294693103406	0.332350289973441	.	.

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Relation with cancer stages for NLRC5

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NLRC5

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NLRC5

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NLRC5

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NLRC5	C0023893	Liver Cirrhosis, Experimental	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene