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Editing gene: TM2D1 (CAeditome ID:83941)

Gene summary for TM2D1

Gene summary

Gene information	Gene symbol	TM2D1
	Gene ID	83941
	Gene name	TM2 domain containing 1
	Synonyms	BBP
	Cytomap	1p31.3
	Type of gene	protein-coding
	Description	TM2 domain-containing protein 1Beta-amyloid peptide binding proteinamyloid-beta-binding proteinbeta-amyloid-binding proteinhBBP
	Modification date	20210518
	UniProtAcc	Q9BX74
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for TM2D1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000162604.11

RNA A-to-I editing events in Cancer.

CAediting_68959(61682641, -), CAediting_68960(61682643, -), CAediting_68961(61682646, -), CAediting_68962(61682647, -), CAediting_68963(61682655, -), CAediting_68964(61682678, -), CAediting_68965(61682683, -), CAediting_68966(61682698, -), CAediting_68967(61682707, -), CAediting_68968(61682729, -), CAediting_68969(61682732, -), CAediting_68970(61682761, -), CAediting_68971(61682771, -), CAediting_68972(61682781, -), CAediting_68973(61682793, -), CAediting_68974(61682806, -), CAediting_68975(61682810, -), CAediting_68976(61682811, -), CAediting_68977(61682817, -), CAediting_68978(61682830, -), CAediting_68979(61682855, -), CAediting_68980(61684841, -), CAediting_68981(61684846, -), CAediting_68982(61684847, -), CAediting_68983(61684877, -), CAediting_68984(61684906, -), CAediting_68985(61684910, -), CAediting_68986(61684942, -), CAediting_68987(61684947, -), CAediting_68988(61684983, -), CAediting_68989(61684985, -), CAediting_68990(61684987, -), CAediting_68991(61684997, -), CAediting_68992(61685072, -), CAediting_68993(61685077, -), CAediting_68994(61685078, -), CAediting_68995(61685086, -), CAediting_68996(61685832, -), CAediting_68997(61685857, -), CAediting_68998(61685888, -), CAediting_68999(61685896, -), CAediting_69000(61685930, -), CAediting_69001(61685961, -), CAediting_69002(61685966, -), CAediting_69003(61685975, -), CAediting_69004(61686007, -), CAediting_69005(61686412, -), CAediting_69006(61686474, -), CAediting_69007(61686531, -), CAediting_69008(61686539, -), CAediting_69009(61686579, -), CAediting_69010(61686580, -), CAediting_69011(61686583, -), CAediting_69012(61686613, -), CAediting_69013(61686619, -), CAediting_69014(61686657, -), CAediting_69015(61686675, -), CAediting_69016(61686679, -), CAediting_69017(61686837, -), CAediting_69018(61686839, -), CAediting_69019(61686840, -), CAediting_69020(61686841, -), CAediting_69021(61686861, -), CAediting_69022(61686871, -), CAediting_69023(61686876, -), CAediting_69024(61686885, -), CAediting_69025(61686917, -), CAediting_69026(61686923, -), CAediting_69027(61687161, -), CAediting_69028(61688490, -), CAediting_69029(61688531, -), CAediting_69030(61688540, -), CAediting_69031(61688601, -), CAediting_69032(61688614, -), CAediting_69033(61688623, -), CAediting_69034(61688640, -), CAediting_69035(61689418, -), CAediting_69036(61689424, -), CAediting_69037(61689435, -), CAediting_69038(61689472, -), CAediting_69039(61689494, -), CAediting_69040(61689502, -), CAediting_69041(61689508, -), CAediting_69042(61689516, -), CAediting_69043(61689550, -), CAediting_69044(61689551, -), CAediting_69045(61689552, -), CAediting_69046(61689553, -), CAediting_69047(61689555, -), CAediting_69048(61689572, -), CAediting_69049(61689600, -), CAediting_69050(61689646, -), CAediting_69051(61690335, -), CAediting_69052(61690370, -), CAediting_69053(61690374, -), CAediting_69054(61690421, -), CAediting_69055(61692651, -), CAediting_69056(61692998, -), CAediting_69057(61693008, -), CAediting_69058(61693069, -), CAediting_69059(61693115, -), CAediting_69060(61693120, -), CAediting_69061(61693128, -), CAediting_69062(61693129, -), CAediting_69063(61693137, -), CAediting_69064(61696347, -), CAediting_69065(61696356, -), CAediting_69066(61696371, -), CAediting_69067(61696373, -), CAediting_69068(61696493, -), CAediting_69069(61696823, -), CAediting_69070(61696825, -), CAediting_69071(61696827, -), CAediting_69072(61696842, -), CAediting_69073(61696843, -), CAediting_69074(61696851, -), CAediting_69075(61696866, -), CAediting_69076(61696870, -), CAediting_69077(61696874, -), CAediting_69078(61696875, -), CAediting_69079(61696891, -), CAediting_69080(61696892, -), CAediting_69081(61696896, -), CAediting_69082(61696897, -), CAediting_69083(61696922, -), CAediting_69084(61696924, -), CAediting_69085(61696925, -), CAediting_69086(61696927, -), CAediting_69087(61697404, -), CAediting_69088(61697417, -), CAediting_69089(61697424, -), CAediting_69090(61697429, -), CAediting_69091(61697432, -), CAediting_69092(61697448, -), CAediting_69093(61697455, -), CAediting_69094(61697456, -), CAediting_69095(61697461, -), CAediting_69096(61697471, -), CAediting_69097(61697477, -), CAediting_69098(61697478, -), CAediting_69099(61697484, -), CAediting_69100(61697490, -), CAediting_69101(61698349, -), CAediting_69102(61698368, -), CAediting_69103(61698377, -), CAediting_69104(61698527, -), CAediting_69105(61698835, -), CAediting_69106(61699080, -), CAediting_69107(61699098, -), CAediting_69108(61699099, -), CAediting_69109(61699108, -), CAediting_69110(61699141, -), CAediting_69111(61699177, -), CAediting_69112(61701940, -), CAediting_69113(61701946, -), CAediting_69114(61702024, -), CAediting_69115(61702052, -), CAediting_69116(61702078, -), CAediting_69117(61702529, -), CAediting_69118(61702550, -), CAediting_69119(61702618, -), CAediting_69120(61702849, -), CAediting_69121(61702861, -), CAediting_69122(61702871, -), CAediting_69123(61703030, -), CAediting_69124(61703486, -), CAediting_69125(61703580, -), CAediting_69126(61703686, -), CAediting_69127(61704006, -), CAediting_69128(61704028, -), CAediting_69129(61704117, -), CAediting_69130(61704141, -), CAediting_69131(61704179, -), CAediting_69132(61704569, -), CAediting_69133(61704632, -), CAediting_69134(61704698, -), CAediting_69135(61704704, -), CAediting_69136(61704705, -), CAediting_69137(61704726, -), CAediting_69138(61704808, -), CAediting_69139(61704821, -), CAediting_69140(61704830, -), CAediting_69141(61704848, -), CAediting_69142(61704862, -), CAediting_69143(61704897, -), CAediting_69144(61705283, -), CAediting_69145(61705310, -), CAediting_69146(61705323, -), CAediting_69147(61705368, -), CAediting_69148(61705382, -), CAediting_69149(61705405, -), CAediting_69150(61705459, -), CAediting_69151(61706301, -), CAediting_69152(61706327, -), CAediting_69153(61706332, -), CAediting_69154(61706342, -), CAediting_69155(61706402, -), CAediting_69156(61706700, -), CAediting_69157(61706724, -), CAediting_69158(61706790, -), CAediting_69159(61706796, -), CAediting_69160(61707052, -), CAediting_69161(61707063, -), CAediting_69162(61707133, -), CAediting_69163(61707143, -), CAediting_69164(61707147, -), CAediting_69165(61707172, -), CAediting_69166(61707186, -), CAediting_69167(61707234, -), CAediting_69168(61708141, -), CAediting_69169(61708151, -), CAediting_69170(61708207, -), CAediting_69171(61708212, -), CAediting_69172(61708215, -), CAediting_69173(61708216, -), CAediting_69174(61708261, -), CAediting_69175(61708286, -), CAediting_69176(61708289, -), CAediting_69177(61708323, -), CAediting_69178(61708329, -), CAediting_69179(61709000, -), CAediting_69180(61709007, -), CAediting_69181(61709011, -), CAediting_69182(61709017, -), CAediting_69183(61709044, -), CAediting_69184(61709053, -), CAediting_69185(61709079, -), CAediting_69186(61709089, -), CAediting_69187(61709158, -), CAediting_69188(61710259, -), CAediting_69189(61711093, -), CAediting_69190(61711120, -), CAediting_69191(61711127, -), CAediting_69192(61711208, -), CAediting_69193(61711230, -), CAediting_69194(61711247, -), CAediting_69195(61711248, -), CAediting_69196(61711254, -), CAediting_69197(61711267, -), CAediting_69198(61711291, -), CAediting_69199(61711576, -), CAediting_69200(61711978, -), CAediting_69201(61712005, -), CAediting_69202(61712011, -), CAediting_69203(61712471, -), CAediting_69204(61712487, -), CAediting_69205(61712503, -), CAediting_69206(61712507, -), CAediting_69207(61712519, -), CAediting_69208(61712549, -), CAediting_69209(61712562, -), CAediting_69210(61712587, -), CAediting_69211(61712593, -), CAediting_69212(61712612, -), CAediting_69213(61712619, -), CAediting_69214(61712648, -), CAediting_69215(61712683, -), CAediting_69216(61712690, -), CAediting_69217(61712702, -), CAediting_69218(61713004, -), CAediting_69219(61713007, -), CAediting_69220(61713058, -), CAediting_69221(61713110, -), CAediting_69222(61713366, -), CAediting_69223(61714313, -), CAediting_69224(61714375, -), CAediting_69225(61714419, -), CAediting_69226(61714459, -), CAediting_69227(61714489, -), CAediting_69228(61714519, -), CAediting_69229(61714533, -), CAediting_69230(61714535, -), CAediting_69231(61714620, -), CAediting_69232(61714647, -), CAediting_69233(61714653, -), CAediting_69234(61714693, -), CAediting_69235(61714695, -), CAediting_69236(61714715, -), CAediting_69237(61714723, -), CAediting_69238(61714730, -), CAediting_69239(61714731, -), CAediting_69240(61714733, -), CAediting_69241(61714735, -), CAediting_69242(61714780, -), CAediting_69243(61715408, -), CAediting_69244(61715482, -), CAediting_69245(61715485, -), CAediting_69246(61715518, -), CAediting_69247(61715526, -), CAediting_69248(61715536, -), CAediting_69249(61715548, -), CAediting_69250(61715561, -), CAediting_69251(61715565, -), CAediting_69252(61715566, -), CAediting_69253(61715934, -), CAediting_69254(61715940, -), CAediting_69255(61716077, -), CAediting_69256(61716203, -), CAediting_69257(61716219, -), CAediting_69258(61716243, -), CAediting_69259(61716275, -), CAediting_69260(61717155, -), CAediting_69261(61717159, -), CAediting_69262(61717246, -), CAediting_69263(61717274, -), CAediting_69264(61717292, -), CAediting_69265(61717639, -), CAediting_69266(61717652, -), CAediting_69267(61717905, -), CAediting_69268(61717931, -), CAediting_69269(61718059, -), CAediting_69270(61718073, -), CAediting_69271(61718100, -), CAediting_69272(61718125, -), CAediting_69273(61718152, -), CAediting_69274(61718162, -), CAediting_69275(61718214, -), CAediting_69276(61718227, -), CAediting_69277(61718233, -), CAediting_69278(61718246, -), CAediting_69279(61718288, -), CAediting_69280(61719196, -), CAediting_69281(61719282, -), CAediting_69282(61719287, -), CAediting_69283(61719292, -), CAediting_69284(61719323, -), CAediting_69285(61719561, -), CAediting_69286(61719607, -), CAediting_69287(61719630, -), CAediting_69288(61719665, -), CAediting_69289(61719667, -), CAediting_69290(61719671, -), CAediting_69291(61719672, -), CAediting_69292(61719673, -), CAediting_69293(61719698, -), CAediting_69294(61719699, -), CAediting_69295(61719702, -), CAediting_69296(61719713, -), CAediting_69297(61719714, -), CAediting_69298(61719732, -), CAediting_69299(61719741, -), CAediting_69300(61719767, -), CAediting_69301(61720338, -), CAediting_69302(61720374, -), CAediting_69303(61720380, -), CAediting_69304(61720388, -), CAediting_69305(61720396, -), CAediting_69306(61720406, -), CAediting_69307(61720514, -), CAediting_69308(61720515, -), CAediting_69309(61720517, -), CAediting_69310(61720964, -), CAediting_69311(61721109, -), CAediting_69312(61721174, -), CAediting_69313(61721179, -), CAediting_69314(61721187, -), CAediting_69315(61721209, -), CAediting_69316(61721490, -), CAediting_69317(61721847, -), CAediting_69318(61721853, -), CAediting_69319(61722011, -), CAediting_69320(61722050, -), CAediting_69321(61722051, -), CAediting_69322(61722054, -), CAediting_69323(61722100, -), CAediting_69324(61722106, -), CAediting_69325(61722164, -), CAediting_69326(61722191, -), CAediting_69327(61722223, -), CAediting_69328(61722234, -), CAediting_69329(61722447, -), CAediting_69330(61722480, -), CAediting_69331(61722506, -), CAediting_69332(61722507, -), CAediting_69333(61722533, -), CAediting_69334(61722639, -), CAediting_69335(61722640, -), CAediting_69336(61722646, -), CAediting_69337(61722662, -), CAediting_69338(61724027, -), CAediting_69339(61724033, -), CAediting_69340(61724293, -), CAediting_69341(61724321, -), CAediting_69342(61724397, -),

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RNA editing positional annotations for TM2D1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_68959	chr1_61682641_-	ncRNA_intronic
CAediting_68960	chr1_61682643_-	ncRNA_intronic
CAediting_68961	chr1_61682646_-	ncRNA_intronic
CAediting_68962	chr1_61682647_-	ncRNA_intronic
CAediting_68963	chr1_61682655_-	ncRNA_intronic
CAediting_68964	chr1_61682678_-	ncRNA_intronic
CAediting_68965	chr1_61682683_-	ncRNA_intronic
CAediting_68966	chr1_61682698_-	ncRNA_intronic
CAediting_68967	chr1_61682707_-	ncRNA_intronic
CAediting_68968	chr1_61682729_-	ncRNA_intronic
CAediting_68969	chr1_61682732_-	ncRNA_intronic
CAediting_68970	chr1_61682761_-	ncRNA_intronic
CAediting_68971	chr1_61682771_-	ncRNA_intronic
CAediting_68972	chr1_61682781_-	ncRNA_intronic
CAediting_68973	chr1_61682793_-	ncRNA_intronic
CAediting_68974	chr1_61682806_-	ncRNA_intronic
CAediting_68975	chr1_61682810_-	ncRNA_intronic
CAediting_68976	chr1_61682811_-	ncRNA_intronic
CAediting_68977	chr1_61682817_-	ncRNA_intronic
CAediting_68978	chr1_61682830_-	ncRNA_intronic
CAediting_68979	chr1_61682855_-	ncRNA_intronic
CAediting_68980	chr1_61684841_-	ncRNA_intronic
CAediting_68981	chr1_61684846_-	ncRNA_intronic
CAediting_68982	chr1_61684847_-	ncRNA_intronic
CAediting_68983	chr1_61684877_-	ncRNA_intronic
CAediting_68984	chr1_61684906_-	ncRNA_intronic
CAediting_68985	chr1_61684910_-	ncRNA_intronic
CAediting_68986	chr1_61684942_-	ncRNA_intronic
CAediting_68987	chr1_61684947_-	ncRNA_intronic
CAediting_68988	chr1_61684983_-	ncRNA_intronic
CAediting_68989	chr1_61684985_-	ncRNA_intronic
CAediting_68990	chr1_61684987_-	ncRNA_intronic
CAediting_68991	chr1_61684997_-	ncRNA_intronic
CAediting_68992	chr1_61685072_-	ncRNA_intronic
CAediting_68993	chr1_61685077_-	ncRNA_intronic
CAediting_68994	chr1_61685078_-	ncRNA_intronic
CAediting_68995	chr1_61685086_-	ncRNA_intronic
CAediting_68996	chr1_61685832_-	ncRNA_intronic
CAediting_68997	chr1_61685857_-	ncRNA_intronic
CAediting_68998	chr1_61685888_-	ncRNA_intronic
CAediting_68999	chr1_61685896_-	ncRNA_intronic
CAediting_69000	chr1_61685930_-	ncRNA_intronic
CAediting_69001	chr1_61685961_-	ncRNA_intronic
CAediting_69002	chr1_61685966_-	ncRNA_intronic
CAediting_69003	chr1_61685975_-	ncRNA_intronic
CAediting_69004	chr1_61686007_-	ncRNA_intronic
CAediting_69005	chr1_61686412_-	ncRNA_intronic
CAediting_69006	chr1_61686474_-	ncRNA_intronic
CAediting_69007	chr1_61686531_-	ncRNA_intronic
CAediting_69008	chr1_61686539_-	ncRNA_intronic
CAediting_69009	chr1_61686579_-	ncRNA_intronic
CAediting_69010	chr1_61686580_-	ncRNA_intronic
CAediting_69011	chr1_61686583_-	ncRNA_intronic
CAediting_69012	chr1_61686613_-	ncRNA_intronic
CAediting_69013	chr1_61686619_-	ncRNA_intronic
CAediting_69014	chr1_61686657_-	ncRNA_intronic
CAediting_69015	chr1_61686675_-	ncRNA_intronic
CAediting_69016	chr1_61686679_-	ncRNA_intronic
CAediting_69017	chr1_61686837_-	ncRNA_exonic
CAediting_69018	chr1_61686839_-	ncRNA_exonic
CAediting_69019	chr1_61686840_-	ncRNA_exonic
CAediting_69020	chr1_61686841_-	ncRNA_exonic
CAediting_69021	chr1_61686861_-	ncRNA_exonic
CAediting_69022	chr1_61686871_-	ncRNA_exonic
CAediting_69023	chr1_61686876_-	ncRNA_exonic
CAediting_69024	chr1_61686885_-	ncRNA_exonic
CAediting_69025	chr1_61686917_-	ncRNA_exonic
CAediting_69026	chr1_61686923_-	ncRNA_splicing
CAediting_69027	chr1_61687161_-	ncRNA_intronic
CAediting_69028	chr1_61688490_-	ncRNA_intronic
CAediting_69029	chr1_61688531_-	ncRNA_intronic
CAediting_69030	chr1_61688540_-	ncRNA_intronic
CAediting_69031	chr1_61688601_-	ncRNA_intronic
CAediting_69032	chr1_61688614_-	ncRNA_intronic
CAediting_69033	chr1_61688623_-	ncRNA_intronic
CAediting_69034	chr1_61688640_-	ncRNA_intronic
CAediting_69035	chr1_61689418_-	ncRNA_intronic
CAediting_69036	chr1_61689424_-	ncRNA_intronic
CAediting_69037	chr1_61689435_-	ncRNA_intronic
CAediting_69038	chr1_61689472_-	ncRNA_intronic
CAediting_69039	chr1_61689494_-	ncRNA_intronic
CAediting_69040	chr1_61689502_-	ncRNA_intronic
CAediting_69041	chr1_61689508_-	ncRNA_intronic
CAediting_69042	chr1_61689516_-	ncRNA_intronic
CAediting_69043	chr1_61689550_-	ncRNA_intronic
CAediting_69044	chr1_61689551_-	ncRNA_intronic
CAediting_69045	chr1_61689552_-	ncRNA_intronic
CAediting_69046	chr1_61689553_-	ncRNA_intronic
CAediting_69047	chr1_61689555_-	ncRNA_intronic
CAediting_69048	chr1_61689572_-	ncRNA_intronic
CAediting_69049	chr1_61689600_-	ncRNA_intronic
CAediting_69050	chr1_61689646_-	ncRNA_intronic
CAediting_69051	chr1_61690335_-	ncRNA_intronic
CAediting_69052	chr1_61690370_-	ncRNA_intronic
CAediting_69053	chr1_61690374_-	ncRNA_intronic
CAediting_69054	chr1_61690421_-	ncRNA_intronic
CAediting_69055	chr1_61692651_-	ncRNA_intronic
CAediting_69056	chr1_61692998_-	ncRNA_intronic
CAediting_69057	chr1_61693008_-	ncRNA_intronic
CAediting_69058	chr1_61693069_-	ncRNA_intronic
CAediting_69059	chr1_61693115_-	ncRNA_intronic
CAediting_69060	chr1_61693120_-	ncRNA_intronic
CAediting_69061	chr1_61693128_-	ncRNA_intronic
CAediting_69062	chr1_61693129_-	ncRNA_intronic
CAediting_69063	chr1_61693137_-	ncRNA_intronic
CAediting_69064	chr1_61696347_-	ncRNA_intronic
CAediting_69065	chr1_61696356_-	ncRNA_intronic
CAediting_69066	chr1_61696371_-	ncRNA_intronic
CAediting_69067	chr1_61696373_-	ncRNA_intronic
CAediting_69068	chr1_61696493_-	ncRNA_intronic
CAediting_69069	chr1_61696823_-	ncRNA_intronic
CAediting_69070	chr1_61696825_-	ncRNA_intronic
CAediting_69071	chr1_61696827_-	ncRNA_intronic
CAediting_69072	chr1_61696842_-	ncRNA_intronic
CAediting_69073	chr1_61696843_-	ncRNA_intronic
CAediting_69074	chr1_61696851_-	ncRNA_intronic
CAediting_69075	chr1_61696866_-	ncRNA_intronic
CAediting_69076	chr1_61696870_-	ncRNA_intronic
CAediting_69077	chr1_61696874_-	ncRNA_intronic
CAediting_69078	chr1_61696875_-	ncRNA_intronic
CAediting_69079	chr1_61696891_-	ncRNA_intronic
CAediting_69080	chr1_61696892_-	ncRNA_intronic
CAediting_69081	chr1_61696896_-	ncRNA_intronic
CAediting_69082	chr1_61696897_-	ncRNA_intronic
CAediting_69083	chr1_61696922_-	ncRNA_intronic
CAediting_69084	chr1_61696924_-	ncRNA_intronic
CAediting_69085	chr1_61696925_-	ncRNA_intronic
CAediting_69086	chr1_61696927_-	ncRNA_intronic
CAediting_69087	chr1_61697404_-	ncRNA_intronic
CAediting_69088	chr1_61697417_-	ncRNA_intronic
CAediting_69089	chr1_61697424_-	ncRNA_intronic
CAediting_69090	chr1_61697429_-	ncRNA_intronic
CAediting_69091	chr1_61697432_-	ncRNA_intronic
CAediting_69092	chr1_61697448_-	ncRNA_intronic
CAediting_69093	chr1_61697455_-	ncRNA_intronic
CAediting_69094	chr1_61697456_-	ncRNA_intronic
CAediting_69095	chr1_61697461_-	ncRNA_intronic
CAediting_69096	chr1_61697471_-	ncRNA_intronic
CAediting_69097	chr1_61697477_-	ncRNA_intronic
CAediting_69098	chr1_61697478_-	ncRNA_intronic
CAediting_69099	chr1_61697484_-	ncRNA_intronic
CAediting_69100	chr1_61697490_-	ncRNA_intronic
CAediting_69101	chr1_61698349_-	ncRNA_intronic
CAediting_69102	chr1_61698368_-	ncRNA_intronic
CAediting_69103	chr1_61698377_-	ncRNA_intronic
CAediting_69104	chr1_61698527_-	ncRNA_intronic
CAediting_69105	chr1_61698835_-	ncRNA_intronic
CAediting_69106	chr1_61699080_-	ncRNA_intronic
CAediting_69107	chr1_61699098_-	ncRNA_intronic
CAediting_69108	chr1_61699099_-	ncRNA_intronic
CAediting_69109	chr1_61699108_-	ncRNA_intronic
CAediting_69110	chr1_61699141_-	ncRNA_intronic
CAediting_69111	chr1_61699177_-	ncRNA_intronic
CAediting_69112	chr1_61701940_-	ncRNA_intronic
CAediting_69113	chr1_61701946_-	ncRNA_intronic
CAediting_69114	chr1_61702024_-	ncRNA_intronic
CAediting_69115	chr1_61702052_-	ncRNA_intronic
CAediting_69116	chr1_61702078_-	ncRNA_intronic
CAediting_69117	chr1_61702529_-	ncRNA_intronic
CAediting_69118	chr1_61702550_-	ncRNA_intronic
CAediting_69119	chr1_61702618_-	ncRNA_intronic
CAediting_69120	chr1_61702849_-	ncRNA_intronic
CAediting_69121	chr1_61702861_-	ncRNA_intronic
CAediting_69122	chr1_61702871_-	ncRNA_intronic
CAediting_69123	chr1_61703030_-	ncRNA_intronic
CAediting_69124	chr1_61703486_-	ncRNA_intronic
CAediting_69125	chr1_61703580_-	ncRNA_intronic
CAediting_69126	chr1_61703686_-	ncRNA_intronic
CAediting_69127	chr1_61704006_-	ncRNA_intronic
CAediting_69128	chr1_61704028_-	ncRNA_intronic
CAediting_69129	chr1_61704117_-	ncRNA_intronic
CAediting_69130	chr1_61704141_-	ncRNA_intronic
CAediting_69131	chr1_61704179_-	ncRNA_intronic
CAediting_69132	chr1_61704569_-	ncRNA_intronic
CAediting_69133	chr1_61704632_-	ncRNA_intronic
CAediting_69134	chr1_61704698_-	ncRNA_intronic
CAediting_69135	chr1_61704704_-	ncRNA_intronic
CAediting_69136	chr1_61704705_-	ncRNA_intronic
CAediting_69137	chr1_61704726_-	ncRNA_intronic
CAediting_69138	chr1_61704808_-	ncRNA_intronic
CAediting_69139	chr1_61704821_-	ncRNA_intronic
CAediting_69140	chr1_61704830_-	ncRNA_intronic
CAediting_69141	chr1_61704848_-	ncRNA_intronic
CAediting_69142	chr1_61704862_-	ncRNA_intronic
CAediting_69143	chr1_61704897_-	ncRNA_intronic
CAediting_69144	chr1_61705283_-	ncRNA_intronic
CAediting_69145	chr1_61705310_-	ncRNA_intronic
CAediting_69146	chr1_61705323_-	ncRNA_intronic
CAediting_69147	chr1_61705368_-	ncRNA_intronic
CAediting_69148	chr1_61705382_-	ncRNA_intronic
CAediting_69149	chr1_61705405_-	ncRNA_intronic
CAediting_69150	chr1_61705459_-	ncRNA_intronic
CAediting_69151	chr1_61706301_-	ncRNA_intronic
CAediting_69152	chr1_61706327_-	ncRNA_intronic
CAediting_69153	chr1_61706332_-	ncRNA_intronic
CAediting_69154	chr1_61706342_-	ncRNA_intronic
CAediting_69155	chr1_61706402_-	ncRNA_intronic
CAediting_69156	chr1_61706700_-	ncRNA_intronic
CAediting_69157	chr1_61706724_-	ncRNA_intronic
CAediting_69158	chr1_61706790_-	ncRNA_intronic
CAediting_69159	chr1_61706796_-	ncRNA_intronic
CAediting_69160	chr1_61707052_-	ncRNA_intronic
CAediting_69161	chr1_61707063_-	ncRNA_intronic
CAediting_69162	chr1_61707133_-	ncRNA_intronic
CAediting_69163	chr1_61707143_-	ncRNA_intronic
CAediting_69164	chr1_61707147_-	ncRNA_intronic
CAediting_69165	chr1_61707172_-	ncRNA_intronic
CAediting_69166	chr1_61707186_-	ncRNA_intronic
CAediting_69167	chr1_61707234_-	ncRNA_intronic
CAediting_69168	chr1_61708141_-	ncRNA_intronic
CAediting_69169	chr1_61708151_-	ncRNA_intronic
CAediting_69170	chr1_61708207_-	ncRNA_intronic
CAediting_69171	chr1_61708212_-	ncRNA_intronic
CAediting_69172	chr1_61708215_-	ncRNA_intronic
CAediting_69173	chr1_61708216_-	ncRNA_intronic
CAediting_69174	chr1_61708261_-	ncRNA_intronic
CAediting_69175	chr1_61708286_-	ncRNA_intronic
CAediting_69176	chr1_61708289_-	ncRNA_intronic
CAediting_69177	chr1_61708323_-	ncRNA_intronic
CAediting_69178	chr1_61708329_-	ncRNA_intronic
CAediting_69179	chr1_61709000_-	ncRNA_intronic
CAediting_69180	chr1_61709007_-	ncRNA_intronic
CAediting_69181	chr1_61709011_-	ncRNA_intronic
CAediting_69182	chr1_61709017_-	ncRNA_intronic
CAediting_69183	chr1_61709044_-	ncRNA_intronic
CAediting_69184	chr1_61709053_-	ncRNA_intronic
CAediting_69185	chr1_61709079_-	ncRNA_intronic
CAediting_69186	chr1_61709089_-	ncRNA_intronic
CAediting_69187	chr1_61709158_-	ncRNA_intronic
CAediting_69188	chr1_61710259_-	ncRNA_intronic
CAediting_69189	chr1_61711093_-	ncRNA_intronic
CAediting_69190	chr1_61711120_-	ncRNA_intronic
CAediting_69191	chr1_61711127_-	ncRNA_intronic
CAediting_69192	chr1_61711208_-	ncRNA_intronic
CAediting_69193	chr1_61711230_-	ncRNA_intronic
CAediting_69194	chr1_61711247_-	ncRNA_intronic
CAediting_69195	chr1_61711248_-	ncRNA_intronic
CAediting_69196	chr1_61711254_-	ncRNA_intronic
CAediting_69197	chr1_61711267_-	ncRNA_intronic
CAediting_69198	chr1_61711291_-	ncRNA_intronic
CAediting_69199	chr1_61711576_-	ncRNA_intronic
CAediting_69200	chr1_61711978_-	ncRNA_intronic
CAediting_69201	chr1_61712005_-	ncRNA_intronic
CAediting_69202	chr1_61712011_-	ncRNA_intronic
CAediting_69203	chr1_61712471_-	ncRNA_intronic
CAediting_69204	chr1_61712487_-	ncRNA_intronic
CAediting_69205	chr1_61712503_-	ncRNA_intronic
CAediting_69206	chr1_61712507_-	ncRNA_intronic
CAediting_69207	chr1_61712519_-	ncRNA_intronic
CAediting_69208	chr1_61712549_-	ncRNA_intronic
CAediting_69209	chr1_61712562_-	ncRNA_intronic
CAediting_69210	chr1_61712587_-	ncRNA_intronic
CAediting_69211	chr1_61712593_-	ncRNA_intronic
CAediting_69212	chr1_61712612_-	ncRNA_intronic
CAediting_69213	chr1_61712619_-	ncRNA_intronic
CAediting_69214	chr1_61712648_-	ncRNA_intronic
CAediting_69215	chr1_61712683_-	ncRNA_intronic
CAediting_69216	chr1_61712690_-	ncRNA_intronic
CAediting_69217	chr1_61712702_-	ncRNA_intronic
CAediting_69218	chr1_61713004_-	ncRNA_intronic
CAediting_69219	chr1_61713007_-	ncRNA_intronic
CAediting_69220	chr1_61713058_-	ncRNA_intronic
CAediting_69221	chr1_61713110_-	ncRNA_intronic
CAediting_69222	chr1_61713366_-	ncRNA_intronic
CAediting_69223	chr1_61714313_-	ncRNA_intronic
CAediting_69224	chr1_61714375_-	ncRNA_intronic
CAediting_69225	chr1_61714419_-	ncRNA_intronic
CAediting_69226	chr1_61714459_-	ncRNA_intronic
CAediting_69227	chr1_61714489_-	ncRNA_intronic
CAediting_69228	chr1_61714519_-	ncRNA_intronic
CAediting_69229	chr1_61714533_-	ncRNA_intronic
CAediting_69230	chr1_61714535_-	ncRNA_intronic
CAediting_69231	chr1_61714620_-	ncRNA_intronic
CAediting_69232	chr1_61714647_-	ncRNA_intronic
CAediting_69233	chr1_61714653_-	ncRNA_intronic
CAediting_69234	chr1_61714693_-	ncRNA_intronic
CAediting_69235	chr1_61714695_-	ncRNA_intronic
CAediting_69236	chr1_61714715_-	ncRNA_intronic
CAediting_69237	chr1_61714723_-	ncRNA_intronic
CAediting_69238	chr1_61714730_-	ncRNA_intronic
CAediting_69239	chr1_61714731_-	ncRNA_intronic
CAediting_69240	chr1_61714733_-	ncRNA_intronic
CAediting_69241	chr1_61714735_-	ncRNA_intronic
CAediting_69242	chr1_61714780_-	ncRNA_intronic
CAediting_69243	chr1_61715408_-	ncRNA_intronic
CAediting_69244	chr1_61715482_-	ncRNA_intronic
CAediting_69245	chr1_61715485_-	ncRNA_intronic
CAediting_69246	chr1_61715518_-	ncRNA_intronic
CAediting_69247	chr1_61715526_-	ncRNA_intronic
CAediting_69248	chr1_61715536_-	ncRNA_intronic
CAediting_69249	chr1_61715548_-	ncRNA_intronic
CAediting_69250	chr1_61715561_-	ncRNA_intronic
CAediting_69251	chr1_61715565_-	ncRNA_intronic
CAediting_69252	chr1_61715566_-	ncRNA_intronic
CAediting_69253	chr1_61715934_-	ncRNA_intronic
CAediting_69254	chr1_61715940_-	ncRNA_intronic
CAediting_69255	chr1_61716077_-	ncRNA_intronic
CAediting_69256	chr1_61716203_-	ncRNA_intronic
CAediting_69257	chr1_61716219_-	ncRNA_intronic
CAediting_69258	chr1_61716243_-	ncRNA_intronic
CAediting_69259	chr1_61716275_-	ncRNA_intronic
CAediting_69260	chr1_61717155_-	ncRNA_intronic
CAediting_69261	chr1_61717159_-	ncRNA_intronic
CAediting_69262	chr1_61717246_-	ncRNA_intronic
CAediting_69263	chr1_61717274_-	ncRNA_intronic
CAediting_69264	chr1_61717292_-	ncRNA_intronic
CAediting_69265	chr1_61717639_-	ncRNA_intronic
CAediting_69266	chr1_61717652_-	ncRNA_intronic
CAediting_69267	chr1_61717905_-	ncRNA_intronic
CAediting_69268	chr1_61717931_-	ncRNA_intronic
CAediting_69269	chr1_61718059_-	ncRNA_intronic
CAediting_69270	chr1_61718073_-	ncRNA_intronic
CAediting_69271	chr1_61718100_-	ncRNA_intronic
CAediting_69272	chr1_61718125_-	ncRNA_intronic
CAediting_69273	chr1_61718152_-	ncRNA_intronic
CAediting_69274	chr1_61718162_-	ncRNA_intronic
CAediting_69275	chr1_61718214_-	ncRNA_intronic
CAediting_69276	chr1_61718227_-	ncRNA_intronic
CAediting_69277	chr1_61718233_-	ncRNA_intronic
CAediting_69278	chr1_61718246_-	ncRNA_intronic
CAediting_69279	chr1_61718288_-	ncRNA_intronic
CAediting_69280	chr1_61719196_-	ncRNA_intronic
CAediting_69281	chr1_61719282_-	ncRNA_intronic
CAediting_69282	chr1_61719287_-	ncRNA_intronic
CAediting_69283	chr1_61719292_-	ncRNA_intronic
CAediting_69284	chr1_61719323_-	ncRNA_intronic
CAediting_69285	chr1_61719561_-	ncRNA_intronic
CAediting_69286	chr1_61719607_-	ncRNA_intronic
CAediting_69287	chr1_61719630_-	ncRNA_intronic
CAediting_69288	chr1_61719665_-	ncRNA_intronic
CAediting_69289	chr1_61719667_-	ncRNA_intronic
CAediting_69290	chr1_61719671_-	ncRNA_intronic
CAediting_69291	chr1_61719672_-	ncRNA_intronic
CAediting_69292	chr1_61719673_-	ncRNA_intronic
CAediting_69293	chr1_61719698_-	ncRNA_intronic
CAediting_69294	chr1_61719699_-	ncRNA_intronic
CAediting_69295	chr1_61719702_-	ncRNA_intronic
CAediting_69296	chr1_61719713_-	ncRNA_intronic
CAediting_69297	chr1_61719714_-	ncRNA_intronic
CAediting_69298	chr1_61719732_-	ncRNA_intronic
CAediting_69299	chr1_61719741_-	ncRNA_intronic
CAediting_69300	chr1_61719767_-	ncRNA_intronic
CAediting_69301	chr1_61720338_-	ncRNA_intronic
CAediting_69302	chr1_61720374_-	ncRNA_intronic
CAediting_69303	chr1_61720380_-	ncRNA_intronic
CAediting_69304	chr1_61720388_-	ncRNA_intronic
CAediting_69305	chr1_61720396_-	ncRNA_intronic
CAediting_69306	chr1_61720406_-	ncRNA_intronic
CAediting_69307	chr1_61720514_-	ncRNA_intronic
CAediting_69308	chr1_61720515_-	ncRNA_intronic
CAediting_69309	chr1_61720517_-	ncRNA_intronic
CAediting_69310	chr1_61720964_-	ncRNA_intronic
CAediting_69311	chr1_61721109_-	ncRNA_intronic
CAediting_69312	chr1_61721174_-	ncRNA_intronic
CAediting_69313	chr1_61721179_-	ncRNA_intronic
CAediting_69314	chr1_61721187_-	ncRNA_intronic
CAediting_69315	chr1_61721209_-	ncRNA_intronic
CAediting_69316	chr1_61721490_-	ncRNA_intronic
CAediting_69317	chr1_61721847_-	ncRNA_intronic
CAediting_69318	chr1_61721853_-	ncRNA_intronic
CAediting_69319	chr1_61722011_-	ncRNA_intronic
CAediting_69320	chr1_61722050_-	ncRNA_intronic
CAediting_69321	chr1_61722051_-	ncRNA_intronic
CAediting_69322	chr1_61722054_-	ncRNA_intronic
CAediting_69323	chr1_61722100_-	ncRNA_intronic
CAediting_69324	chr1_61722106_-	ncRNA_intronic
CAediting_69325	chr1_61722164_-	ncRNA_intronic
CAediting_69326	chr1_61722191_-	ncRNA_intronic
CAediting_69327	chr1_61722223_-	ncRNA_intronic
CAediting_69328	chr1_61722234_-	ncRNA_intronic
CAediting_69329	chr1_61722447_-	ncRNA_intronic
CAediting_69330	chr1_61722480_-	ncRNA_intronic
CAediting_69331	chr1_61722506_-	ncRNA_intronic
CAediting_69332	chr1_61722507_-	ncRNA_intronic
CAediting_69333	chr1_61722533_-	ncRNA_intronic
CAediting_69334	chr1_61722639_-	ncRNA_intronic
CAediting_69335	chr1_61722640_-	ncRNA_intronic
CAediting_69336	chr1_61722646_-	ncRNA_intronic
CAediting_69337	chr1_61722662_-	ncRNA_intronic
CAediting_69338	chr1_61724027_-	ncRNA_intronic
CAediting_69339	chr1_61724033_-	ncRNA_intronic
CAediting_69340	chr1_61724293_-	ncRNA_intronic
CAediting_69341	chr1_61724321_-	ncRNA_intronic
CAediting_69342	chr1_61724397_-	exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_68959	chr1_61682641_-	SINE	Alu	AluSz6
CAediting_68960	chr1_61682643_-	SINE	Alu	AluSz6
CAediting_68961	chr1_61682646_-	SINE	Alu	AluSz6
CAediting_68962	chr1_61682647_-	SINE	Alu	AluSz6
CAediting_68963	chr1_61682655_-	SINE	Alu	AluSz6
CAediting_68964	chr1_61682678_-	SINE	Alu	AluSz6
CAediting_68965	chr1_61682683_-	SINE	Alu	AluSz6
CAediting_68966	chr1_61682698_-	SINE	Alu	AluSz6
CAediting_68967	chr1_61682707_-	SINE	Alu	AluSz6
CAediting_68968	chr1_61682729_-	SINE	Alu	AluSz6
CAediting_68969	chr1_61682732_-	SINE	Alu	AluSz6
CAediting_68970	chr1_61682761_-	SINE	Alu	AluSz6
CAediting_68971	chr1_61682771_-	SINE	Alu	AluSz6
CAediting_68972	chr1_61682781_-	SINE	Alu	AluSz6
CAediting_68973	chr1_61682793_-	SINE	Alu	AluSz6
CAediting_68974	chr1_61682806_-	SINE	Alu	AluSz6
CAediting_68975	chr1_61682810_-	SINE	Alu	AluSz6
CAediting_68976	chr1_61682811_-	SINE	Alu	AluSz6
CAediting_68977	chr1_61682817_-	SINE	Alu	AluSz6
CAediting_68978	chr1_61682830_-	SINE	Alu	AluSz6
CAediting_68979	chr1_61682855_-	SINE	Alu	AluSz6
CAediting_68980	chr1_61684841_-	SINE	Alu	AluJb
CAediting_68981	chr1_61684846_-	SINE	Alu	AluJb
CAediting_68982	chr1_61684847_-	SINE	Alu	AluJb
CAediting_68983	chr1_61684877_-	SINE	Alu	AluJb
CAediting_68984	chr1_61684906_-	SINE	Alu	AluJb
CAediting_68985	chr1_61684910_-	SINE	Alu	AluJb
CAediting_68986	chr1_61684942_-	SINE	Alu	AluJb
CAediting_68987	chr1_61684947_-	SINE	Alu	AluJb
CAediting_68988	chr1_61684983_-	SINE	Alu	AluJb
CAediting_68989	chr1_61684985_-	SINE	Alu	AluJb
CAediting_68990	chr1_61684987_-	SINE	Alu	AluJb
CAediting_68991	chr1_61684997_-	SINE	Alu	AluJb
CAediting_68992	chr1_61685072_-	SINE	Alu	AluJb
CAediting_68993	chr1_61685077_-	SINE	Alu	AluJb
CAediting_68994	chr1_61685078_-	SINE	Alu	AluJb
CAediting_68995	chr1_61685086_-	SINE	Alu	AluJb
CAediting_68996	chr1_61685832_-	SINE	Alu	AluJr
CAediting_68997	chr1_61685857_-	SINE	Alu	AluJr
CAediting_68998	chr1_61685888_-	SINE	Alu	AluJr
CAediting_68999	chr1_61685896_-	SINE	Alu	AluJr
CAediting_69000	chr1_61685930_-	SINE	Alu	AluJr
CAediting_69001	chr1_61685961_-	SINE	Alu	AluJr
CAediting_69002	chr1_61685966_-	SINE	Alu	AluJr
CAediting_69003	chr1_61685975_-	SINE	Alu	AluJr
CAediting_69004	chr1_61686007_-	SINE	Alu	AluJr
CAediting_69005	chr1_61686412_-	SINE	Alu	AluSz6
CAediting_69006	chr1_61686474_-	SINE	Alu	AluSz6
CAediting_69007	chr1_61686531_-	SINE	Alu	AluSz6
CAediting_69008	chr1_61686539_-	SINE	Alu	AluSz6
CAediting_69009	chr1_61686579_-	SINE	Alu	AluSz6
CAediting_69010	chr1_61686580_-	SINE	Alu	AluSz6
CAediting_69011	chr1_61686583_-	SINE	Alu	AluSz6
CAediting_69012	chr1_61686613_-	SINE	Alu	AluSz6
CAediting_69013	chr1_61686619_-	SINE	Alu	AluSz6
CAediting_69014	chr1_61686657_-	SINE	Alu	AluSz6
CAediting_69015	chr1_61686675_-	SINE	Alu	AluSz6
CAediting_69016	chr1_61686679_-	SINE	Alu	AluSz6
CAediting_69017	chr1_61686837_-	SINE	Alu	AluJo
CAediting_69018	chr1_61686839_-	SINE	Alu	AluJo
CAediting_69019	chr1_61686840_-	SINE	Alu	AluJo
CAediting_69020	chr1_61686841_-	SINE	Alu	AluJo
CAediting_69021	chr1_61686861_-	SINE	Alu	AluJo
CAediting_69022	chr1_61686871_-	SINE	Alu	AluJo
CAediting_69023	chr1_61686876_-	SINE	Alu	AluJo
CAediting_69024	chr1_61686885_-	SINE	Alu	AluJo
CAediting_69025	chr1_61686917_-	SINE	Alu	AluJo
CAediting_69026	chr1_61686923_-	SINE	Alu	AluJo
CAediting_69027	chr1_61687161_-	SINE	Alu	FLAM_C
CAediting_69028	chr1_61688490_-	SINE	Alu	AluSc
CAediting_69029	chr1_61688531_-	SINE	Alu	AluSc
CAediting_69030	chr1_61688540_-	SINE	Alu	AluSc
CAediting_69031	chr1_61688601_-	SINE	Alu	AluSc
CAediting_69032	chr1_61688614_-	SINE	Alu	AluSc
CAediting_69033	chr1_61688623_-	SINE	Alu	AluSc
CAediting_69034	chr1_61688640_-	SINE	Alu	AluSc
CAediting_69035	chr1_61689418_-	SINE	Alu	AluJb
CAediting_69036	chr1_61689424_-	SINE	Alu	AluJb
CAediting_69037	chr1_61689435_-	SINE	Alu	AluJb
CAediting_69038	chr1_61689472_-	SINE	Alu	AluJb
CAediting_69039	chr1_61689494_-	SINE	Alu	AluJb
CAediting_69040	chr1_61689502_-	SINE	Alu	AluJb
CAediting_69041	chr1_61689508_-	SINE	Alu	AluJb
CAediting_69042	chr1_61689516_-	SINE	Alu	AluJb
CAediting_69043	chr1_61689550_-	SINE	Alu	AluJb
CAediting_69044	chr1_61689551_-	SINE	Alu	AluJb
CAediting_69045	chr1_61689552_-	SINE	Alu	AluJb
CAediting_69046	chr1_61689553_-	SINE	Alu	AluJb
CAediting_69047	chr1_61689555_-	SINE	Alu	AluJb
CAediting_69048	chr1_61689572_-	SINE	Alu	AluJb
CAediting_69049	chr1_61689600_-	SINE	Alu	AluJb
CAediting_69050	chr1_61689646_-	SINE	Alu	AluJb
CAediting_69051	chr1_61690335_-	SINE	Alu	AluSx1
CAediting_69052	chr1_61690370_-	SINE	Alu	AluSx1
CAediting_69053	chr1_61690374_-	SINE	Alu	AluSx1
CAediting_69054	chr1_61690421_-	SINE	Alu	AluSx1
CAediting_69055	chr1_61692651_-	SINE	Alu	AluJo
CAediting_69056	chr1_61692998_-	SINE	Alu	AluJb
CAediting_69057	chr1_61693008_-	SINE	Alu	AluJb
CAediting_69058	chr1_61693069_-	SINE	Alu	AluJb
CAediting_69059	chr1_61693115_-	SINE	Alu	AluJb
CAediting_69060	chr1_61693120_-	SINE	Alu	AluJb
CAediting_69061	chr1_61693128_-	SINE	Alu	AluJb
CAediting_69062	chr1_61693129_-	SINE	Alu	AluJb
CAediting_69063	chr1_61693137_-	SINE	Alu	AluJb
CAediting_69064	chr1_61696347_-	SINE	Alu	AluSx
CAediting_69065	chr1_61696356_-	SINE	Alu	AluSx
CAediting_69066	chr1_61696371_-	SINE	Alu	AluSx
CAediting_69067	chr1_61696373_-	SINE	Alu	AluSx
CAediting_69068	chr1_61696493_-	SINE	Alu	AluSx
CAediting_69069	chr1_61696823_-	SINE	Alu	AluJr4
CAediting_69070	chr1_61696825_-	SINE	Alu	AluJr4
CAediting_69071	chr1_61696827_-	SINE	Alu	AluJr4
CAediting_69072	chr1_61696842_-	SINE	Alu	AluJr4
CAediting_69073	chr1_61696843_-	SINE	Alu	AluJr4
CAediting_69074	chr1_61696851_-	SINE	Alu	AluJr4
CAediting_69075	chr1_61696866_-	SINE	Alu	AluJr4
CAediting_69076	chr1_61696870_-	SINE	Alu	AluJr4
CAediting_69077	chr1_61696874_-	SINE	Alu	AluJr4
CAediting_69078	chr1_61696875_-	SINE	Alu	AluJr4
CAediting_69079	chr1_61696891_-	SINE	Alu	AluJr4
CAediting_69080	chr1_61696892_-	SINE	Alu	AluJr4
CAediting_69081	chr1_61696896_-	SINE	Alu	AluJr4
CAediting_69082	chr1_61696897_-	SINE	Alu	AluJr4
CAediting_69087	chr1_61697404_-	SINE	Alu	AluJr
CAediting_69088	chr1_61697417_-	SINE	Alu	AluJr
CAediting_69089	chr1_61697424_-	SINE	Alu	AluJr
CAediting_69090	chr1_61697429_-	SINE	Alu	AluJr
CAediting_69091	chr1_61697432_-	SINE	Alu	AluJr
CAediting_69092	chr1_61697448_-	SINE	Alu	AluJr
CAediting_69093	chr1_61697455_-	SINE	Alu	AluJr
CAediting_69094	chr1_61697456_-	SINE	Alu	AluJr
CAediting_69095	chr1_61697461_-	SINE	Alu	AluJr
CAediting_69096	chr1_61697471_-	SINE	Alu	AluJr
CAediting_69097	chr1_61697477_-	SINE	Alu	AluJr
CAediting_69098	chr1_61697478_-	SINE	Alu	AluJr
CAediting_69099	chr1_61697484_-	SINE	Alu	AluJr
CAediting_69100	chr1_61697490_-	SINE	Alu	AluJr
CAediting_69101	chr1_61698349_-	SINE	Alu	AluSp
CAediting_69102	chr1_61698368_-	SINE	Alu	AluSp
CAediting_69103	chr1_61698377_-	SINE	Alu	AluSp
CAediting_69104	chr1_61698527_-	SINE	Alu	AluSp
CAediting_69105	chr1_61698835_-	SINE	Alu	FLAM_A
CAediting_69106	chr1_61699080_-	SINE	Alu	AluJb
CAediting_69107	chr1_61699098_-	SINE	Alu	AluJb
CAediting_69108	chr1_61699099_-	SINE	Alu	AluJb
CAediting_69109	chr1_61699108_-	SINE	Alu	AluJb
CAediting_69110	chr1_61699141_-	SINE	Alu	AluJb
CAediting_69111	chr1_61699177_-	SINE	Alu	AluJb
CAediting_69112	chr1_61701940_-	SINE	Alu	AluSx1
CAediting_69113	chr1_61701946_-	SINE	Alu	AluSx1
CAediting_69114	chr1_61702024_-	SINE	Alu	AluSx1
CAediting_69115	chr1_61702052_-	SINE	Alu	AluSx1
CAediting_69116	chr1_61702078_-	SINE	Alu	AluSx1
CAediting_69117	chr1_61702529_-	SINE	Alu	AluSz
CAediting_69118	chr1_61702550_-	SINE	Alu	AluSz
CAediting_69119	chr1_61702618_-	SINE	Alu	AluSz
CAediting_69120	chr1_61702849_-	SINE	Alu	AluSz6
CAediting_69121	chr1_61702861_-	SINE	Alu	AluSz6
CAediting_69122	chr1_61702871_-	SINE	Alu	AluSz6
CAediting_69123	chr1_61703030_-	SINE	Alu	AluSz6
CAediting_69124	chr1_61703486_-	SINE	Alu	AluSz
CAediting_69125	chr1_61703580_-	SINE	Alu	AluSz
CAediting_69126	chr1_61703686_-	SINE	Alu	AluSz
CAediting_69127	chr1_61704006_-	SINE	Alu	AluSq2
CAediting_69128	chr1_61704028_-	SINE	Alu	AluSq2
CAediting_69129	chr1_61704117_-	SINE	Alu	AluSx
CAediting_69130	chr1_61704141_-	SINE	Alu	AluSx
CAediting_69131	chr1_61704179_-	SINE	Alu	AluSx
CAediting_69132	chr1_61704569_-	SINE	Alu	AluSq2
CAediting_69133	chr1_61704632_-	SINE	Alu	AluSq2
CAediting_69134	chr1_61704698_-	SINE	Alu	AluSq2
CAediting_69135	chr1_61704704_-	SINE	Alu	AluSq2
CAediting_69136	chr1_61704705_-	SINE	Alu	AluSq2
CAediting_69137	chr1_61704726_-	SINE	Alu	AluSq2
CAediting_69138	chr1_61704808_-	SINE	Alu	AluJr
CAediting_69139	chr1_61704821_-	SINE	Alu	AluJr
CAediting_69140	chr1_61704830_-	SINE	Alu	AluJr
CAediting_69141	chr1_61704848_-	SINE	Alu	AluJr
CAediting_69142	chr1_61704862_-	SINE	Alu	AluJr
CAediting_69143	chr1_61704897_-	SINE	Alu	AluJr
CAediting_69144	chr1_61705283_-	SINE	Alu	AluSz
CAediting_69145	chr1_61705310_-	SINE	Alu	AluSz
CAediting_69146	chr1_61705323_-	SINE	Alu	AluSz
CAediting_69147	chr1_61705368_-	SINE	Alu	AluSz
CAediting_69148	chr1_61705382_-	SINE	Alu	AluSz
CAediting_69149	chr1_61705405_-	SINE	Alu	AluSz
CAediting_69150	chr1_61705459_-	SINE	Alu	AluSz
CAediting_69151	chr1_61706301_-	SINE	Alu	AluJb
CAediting_69152	chr1_61706327_-	SINE	Alu	AluJb
CAediting_69153	chr1_61706332_-	SINE	Alu	AluJb
CAediting_69154	chr1_61706342_-	SINE	Alu	AluJb
CAediting_69155	chr1_61706402_-	SINE	Alu	AluJb
CAediting_69156	chr1_61706700_-	SINE	Alu	AluSp
CAediting_69157	chr1_61706724_-	SINE	Alu	AluSp
CAediting_69158	chr1_61706790_-	SINE	Alu	AluSp
CAediting_69159	chr1_61706796_-	SINE	Alu	AluSp
CAediting_69160	chr1_61707052_-	SINE	Alu	AluJb
CAediting_69161	chr1_61707063_-	SINE	Alu	AluJb
CAediting_69162	chr1_61707133_-	SINE	Alu	AluJb
CAediting_69163	chr1_61707143_-	SINE	Alu	AluJb
CAediting_69164	chr1_61707147_-	SINE	Alu	AluJb
CAediting_69165	chr1_61707172_-	SINE	Alu	AluJb
CAediting_69166	chr1_61707186_-	SINE	Alu	AluJb
CAediting_69167	chr1_61707234_-	SINE	Alu	AluJb
CAediting_69168	chr1_61708141_-	SINE	Alu	AluJr
CAediting_69169	chr1_61708151_-	SINE	Alu	AluJr
CAediting_69170	chr1_61708207_-	SINE	Alu	AluJr
CAediting_69171	chr1_61708212_-	SINE	Alu	AluJr
CAediting_69172	chr1_61708215_-	SINE	Alu	AluJr
CAediting_69173	chr1_61708216_-	SINE	Alu	AluJr
CAediting_69174	chr1_61708261_-	SINE	Alu	AluJr
CAediting_69175	chr1_61708286_-	SINE	Alu	AluJr
CAediting_69176	chr1_61708289_-	SINE	Alu	AluJr
CAediting_69177	chr1_61708323_-	SINE	Alu	AluJr
CAediting_69178	chr1_61708329_-	SINE	Alu	AluJr
CAediting_69179	chr1_61709000_-	SINE	Alu	AluJb
CAediting_69180	chr1_61709007_-	SINE	Alu	AluJb
CAediting_69181	chr1_61709011_-	SINE	Alu	AluJb
CAediting_69182	chr1_61709017_-	SINE	Alu	AluJb
CAediting_69183	chr1_61709044_-	SINE	Alu	AluJb
CAediting_69184	chr1_61709053_-	SINE	Alu	AluJb
CAediting_69185	chr1_61709079_-	SINE	Alu	AluJb
CAediting_69186	chr1_61709089_-	SINE	Alu	AluJb
CAediting_69187	chr1_61709158_-	SINE	Alu	AluJb
CAediting_69188	chr1_61710259_-	SINE	Alu	AluJb
CAediting_69189	chr1_61711093_-	SINE	Alu	AluSq2
CAediting_69190	chr1_61711120_-	SINE	Alu	AluSq2
CAediting_69191	chr1_61711127_-	SINE	Alu	AluSq2
CAediting_69192	chr1_61711208_-	SINE	Alu	AluSq2
CAediting_69193	chr1_61711230_-	SINE	Alu	AluSq2
CAediting_69194	chr1_61711247_-	SINE	Alu	AluSq2
CAediting_69195	chr1_61711248_-	SINE	Alu	AluSq2
CAediting_69196	chr1_61711254_-	SINE	Alu	AluSq2
CAediting_69197	chr1_61711267_-	SINE	Alu	AluSq2
CAediting_69198	chr1_61711291_-	SINE	Alu	AluSq2
CAediting_69199	chr1_61711576_-	SINE	Alu	AluJb
CAediting_69200	chr1_61711978_-	SINE	Alu	FLAM_C
CAediting_69201	chr1_61712005_-	SINE	Alu	FLAM_C
CAediting_69202	chr1_61712011_-	SINE	Alu	FLAM_C
CAediting_69203	chr1_61712471_-	SINE	Alu	AluSx1
CAediting_69204	chr1_61712487_-	SINE	Alu	AluSx1
CAediting_69205	chr1_61712503_-	SINE	Alu	AluSx1
CAediting_69206	chr1_61712507_-	SINE	Alu	AluSx1
CAediting_69207	chr1_61712519_-	SINE	Alu	AluSx1
CAediting_69208	chr1_61712549_-	SINE	Alu	AluSx1
CAediting_69209	chr1_61712562_-	SINE	Alu	AluSx1
CAediting_69210	chr1_61712587_-	SINE	Alu	AluSx1
CAediting_69211	chr1_61712593_-	SINE	Alu	AluSx1
CAediting_69212	chr1_61712612_-	SINE	Alu	AluSx1
CAediting_69213	chr1_61712619_-	SINE	Alu	AluSx1
CAediting_69214	chr1_61712648_-	SINE	Alu	AluSx1
CAediting_69215	chr1_61712683_-	SINE	Alu	AluSx1
CAediting_69216	chr1_61712690_-	SINE	Alu	AluSx1
CAediting_69217	chr1_61712702_-	SINE	Alu	AluSx1
CAediting_69218	chr1_61713004_-	SINE	Alu	AluSz
CAediting_69219	chr1_61713007_-	SINE	Alu	AluSz
CAediting_69220	chr1_61713058_-	SINE	Alu	AluSz
CAediting_69221	chr1_61713110_-	SINE	Alu	AluSz
CAediting_69222	chr1_61713366_-	SINE	Alu	AluSz
CAediting_69223	chr1_61714313_-	SINE	Alu	AluSg
CAediting_69224	chr1_61714375_-	SINE	Alu	AluSg
CAediting_69225	chr1_61714419_-	SINE	Alu	AluSg
CAediting_69226	chr1_61714459_-	SINE	Alu	AluSg
CAediting_69227	chr1_61714489_-	SINE	Alu	AluSg
CAediting_69228	chr1_61714519_-	SINE	Alu	AluSg
CAediting_69229	chr1_61714533_-	SINE	Alu	AluSg
CAediting_69230	chr1_61714535_-	SINE	Alu	AluSg
CAediting_69231	chr1_61714620_-	SINE	Alu	AluJb
CAediting_69232	chr1_61714647_-	SINE	Alu	AluJb
CAediting_69233	chr1_61714653_-	SINE	Alu	AluJb
CAediting_69234	chr1_61714693_-	SINE	Alu	AluJb
CAediting_69235	chr1_61714695_-	SINE	Alu	AluJb
CAediting_69236	chr1_61714715_-	SINE	Alu	AluJb
CAediting_69237	chr1_61714723_-	SINE	Alu	AluJb
CAediting_69238	chr1_61714730_-	SINE	Alu	AluJb
CAediting_69239	chr1_61714731_-	SINE	Alu	AluJb
CAediting_69240	chr1_61714733_-	SINE	Alu	AluJb
CAediting_69241	chr1_61714735_-	SINE	Alu	AluJb
CAediting_69242	chr1_61714780_-	SINE	Alu	AluJb
CAediting_69243	chr1_61715408_-	SINE	Alu	AluSz6
CAediting_69244	chr1_61715482_-	SINE	Alu	AluSz6
CAediting_69245	chr1_61715485_-	SINE	Alu	AluSz6
CAediting_69246	chr1_61715518_-	SINE	Alu	AluSz6
CAediting_69247	chr1_61715526_-	SINE	Alu	AluSz6
CAediting_69248	chr1_61715536_-	SINE	Alu	AluSz6
CAediting_69249	chr1_61715548_-	SINE	Alu	AluSz6
CAediting_69250	chr1_61715561_-	SINE	Alu	AluSz6
CAediting_69251	chr1_61715565_-	SINE	Alu	AluSz6
CAediting_69252	chr1_61715566_-	SINE	Alu	AluSz6
CAediting_69253	chr1_61715934_-	SINE	Alu	AluY
CAediting_69254	chr1_61715940_-	SINE	Alu	AluY
CAediting_69255	chr1_61716077_-	SINE	Alu	AluY
CAediting_69256	chr1_61716203_-	SINE	Alu	AluJo
CAediting_69257	chr1_61716219_-	SINE	Alu	AluJo
CAediting_69258	chr1_61716243_-	SINE	Alu	AluJo
CAediting_69259	chr1_61716275_-	SINE	Alu	AluJo
CAediting_69260	chr1_61717155_-	SINE	Alu	AluY
CAediting_69261	chr1_61717159_-	SINE	Alu	AluY
CAediting_69262	chr1_61717246_-	SINE	Alu	AluY
CAediting_69263	chr1_61717274_-	SINE	Alu	AluY
CAediting_69264	chr1_61717292_-	SINE	Alu	AluY
CAediting_69265	chr1_61717639_-	SINE	Alu	AluJr4
CAediting_69266	chr1_61717652_-	SINE	Alu	AluJr4
CAediting_69267	chr1_61717905_-	SINE	Alu	AluJb
CAediting_69268	chr1_61717931_-	SINE	Alu	AluJb
CAediting_69269	chr1_61718059_-	SINE	Alu	AluJb
CAediting_69270	chr1_61718073_-	SINE	Alu	AluJb
CAediting_69271	chr1_61718100_-	SINE	Alu	AluJb
CAediting_69272	chr1_61718125_-	SINE	Alu	AluJb
CAediting_69273	chr1_61718152_-	SINE	Alu	AluJb
CAediting_69274	chr1_61718162_-	SINE	Alu	AluJb
CAediting_69275	chr1_61718214_-	SINE	Alu	AluJb
CAediting_69276	chr1_61718227_-	SINE	Alu	AluJb
CAediting_69277	chr1_61718233_-	SINE	Alu	AluJb
CAediting_69278	chr1_61718246_-	SINE	Alu	AluJb
CAediting_69279	chr1_61718288_-	SINE	Alu	AluJb
CAediting_69280	chr1_61719196_-	SINE	Alu	AluJb
CAediting_69281	chr1_61719282_-	SINE	Alu	AluJb
CAediting_69282	chr1_61719287_-	SINE	Alu	AluJb
CAediting_69283	chr1_61719292_-	SINE	Alu	AluJb
CAediting_69284	chr1_61719323_-	SINE	Alu	AluJb
CAediting_69285	chr1_61719561_-	SINE	Alu	AluSp
CAediting_69286	chr1_61719607_-	SINE	Alu	AluSp
CAediting_69287	chr1_61719630_-	SINE	Alu	AluSp
CAediting_69288	chr1_61719665_-	SINE	Alu	AluSp
CAediting_69289	chr1_61719667_-	SINE	Alu	AluSp
CAediting_69290	chr1_61719671_-	SINE	Alu	AluSp
CAediting_69291	chr1_61719672_-	SINE	Alu	AluSp
CAediting_69292	chr1_61719673_-	SINE	Alu	AluSp
CAediting_69293	chr1_61719698_-	SINE	Alu	AluSp
CAediting_69294	chr1_61719699_-	SINE	Alu	AluSp
CAediting_69295	chr1_61719702_-	SINE	Alu	AluSp
CAediting_69296	chr1_61719713_-	SINE	Alu	AluSp
CAediting_69297	chr1_61719714_-	SINE	Alu	AluSp
CAediting_69298	chr1_61719732_-	SINE	Alu	AluSp
CAediting_69299	chr1_61719741_-	SINE	Alu	AluSp
CAediting_69300	chr1_61719767_-	SINE	Alu	AluSp
CAediting_69301	chr1_61720338_-	SINE	Alu	AluSx
CAediting_69302	chr1_61720374_-	SINE	Alu	AluSx
CAediting_69303	chr1_61720380_-	SINE	Alu	AluSx
CAediting_69304	chr1_61720388_-	SINE	Alu	AluSx
CAediting_69305	chr1_61720396_-	SINE	Alu	AluSx
CAediting_69306	chr1_61720406_-	SINE	Alu	AluSx
CAediting_69307	chr1_61720514_-	SINE	Alu	AluSx
CAediting_69308	chr1_61720515_-	SINE	Alu	AluSx
CAediting_69309	chr1_61720517_-	SINE	Alu	AluSx
CAediting_69310	chr1_61720964_-	SINE	Alu	AluJb
CAediting_69311	chr1_61721109_-	SINE	Alu	AluJb
CAediting_69312	chr1_61721174_-	SINE	Alu	AluJb
CAediting_69313	chr1_61721179_-	SINE	Alu	AluJb
CAediting_69314	chr1_61721187_-	SINE	Alu	AluJb
CAediting_69315	chr1_61721209_-	SINE	Alu	AluJb
CAediting_69316	chr1_61721490_-	SINE	Alu	AluSx
CAediting_69317	chr1_61721847_-	SINE	Alu	FLAM_C
CAediting_69318	chr1_61721853_-	SINE	Alu	FLAM_C
CAediting_69319	chr1_61722011_-	SINE	Alu	AluJb
CAediting_69320	chr1_61722050_-	SINE	Alu	AluJb
CAediting_69321	chr1_61722051_-	SINE	Alu	AluJb
CAediting_69322	chr1_61722054_-	SINE	Alu	AluJb
CAediting_69323	chr1_61722100_-	SINE	Alu	AluJb
CAediting_69324	chr1_61722106_-	SINE	Alu	AluJb
CAediting_69325	chr1_61722164_-	SINE	Alu	AluJb
CAediting_69326	chr1_61722191_-	SINE	Alu	AluJb
CAediting_69327	chr1_61722223_-	SINE	Alu	AluJb
CAediting_69328	chr1_61722234_-	SINE	Alu	AluJb
CAediting_69329	chr1_61722447_-	SINE	Alu	AluSg4
CAediting_69330	chr1_61722480_-	SINE	Alu	AluSg4
CAediting_69331	chr1_61722506_-	SINE	Alu	AluSg4
CAediting_69332	chr1_61722507_-	SINE	Alu	AluSg4
CAediting_69333	chr1_61722533_-	SINE	Alu	AluSg4
CAediting_69334	chr1_61722639_-	SINE	Alu	AluSg4
CAediting_69335	chr1_61722640_-	SINE	Alu	AluSg4
CAediting_69336	chr1_61722646_-	SINE	Alu	AluSg4
CAediting_69337	chr1_61722662_-	SINE	Alu	AluSg4
CAediting_69338	chr1_61724027_-	SINE	Alu	AluJo
CAediting_69339	chr1_61724033_-	SINE	Alu	AluJo
CAediting_69340	chr1_61724293_-	SINE	Alu	AluSz6
CAediting_69341	chr1_61724321_-	SINE	Alu	AluSz6
CAediting_69342	chr1_61724397_-	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for TM2D1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_69021	chr1_61686861_-	61686857:61686879	3SS	0+2i	GTGATCATAACTCATTGCAGCCT	4.57	GTGATCATAACTCATTGCGGCCT	-3.38
ES	CAediting_69022	chr1_61686871_-	61686857:61686879	3SS	0+12i	GTGATCATAACTCATTGCAGCCT	4.57	GTGATCATGACTCATTGCAGCCT	4.53
ES	CAediting_69023	chr1_61686876_-	61686857:61686879	3SS	0+17i	GTGATCATAACTCATTGCAGCCT	4.57	GTGGTCATAACTCATTGCAGCCT	4.15
ES	CAediting_69025	chr1_61686917_-	61686913:61686935	3SS	0+2i	CTTTCTTTTTTTAGAGACAGGGT	-2.47	CTTTCTTTTTTTAGAGACGGGGT	-10.43
ES	CAediting_69025	chr1_61686917_-	61686917:61686939	3SS	3+0i	TTTACTTTCTTTTTTTAGAGACA	0.11	TTTACTTTCTTTTTTTAGAGACG	1.88
ES	CAediting_69026	chr1_61686923_-	61686919:61686941	3SS	0+2i	AATTTACTTTCTTTTTTTAGAGA	8.95	AATTTACTTTCTTTTTTTGGAGA	1
ES	CAediting_69026	chr1_61686923_-	61686913:61686935	3SS	0+8i	CTTTCTTTTTTTAGAGACAGGGT	-2.47	CTTTCTTTTTTTGGAGACAGGGT	2.74
ES	CAediting_69026	chr1_61686923_-	61686917:61686939	3SS	0+4i	TTTACTTTCTTTTTTTAGAGACA	0.11	TTTACTTTCTTTTTTTGGAGACA	0

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000162604.11.TM2D1.

Correlation between RNA A-to-I editing and PSI for ENSG00000162604.11.TM2D1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TM2D1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TM2D1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TM2D1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_69020	chr1_61686841_-	ENSG00000162604.11	ENST00000468586	hsa-miR-375-3p	61686836	61686842	7mer-m8	61686835	61686856	140.00	-14.14
CAediting_69022	chr1_61686871_-	ENSG00000162604.11	ENST00000468586	hsa-miR-433-3p	61686870	61686876	7mer-m8	61686869	61686891	147.00	-13.33
CAediting_69022	chr1_61686871_-	ENSG00000162604.11	ENST00000468586	hsa-miR-937-5p	61686866	61686872	7mer-m8	61686865	61686884	154.00	-18.36
CAediting_69017	chr1_61686837_-	ENSG00000162604.11	ENST00000468586	hsa-miR-5707	61686836	61686843	8mer-1a	61686836	61686857	152.00	-14.19
CAediting_69101	chr1_61698349_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4433a-3p	61698348	61698355	8mer-1a	61698348	61698369	146.00	-21.54
CAediting_69105	chr1_61698835_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6849-3p	61698835	61698841	7mer-m8	61698834	61698855	150.00	-17.88
CAediting_69106	chr1_61699080_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6784-3p	61699076	61699082	7mer-m8	61699075	61699100	149.00	-25.80
CAediting_69106	chr1_61699080_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6802-3p	61699077	61699083	7mer-m8	61699076	61699097	164.00	-24.51
CAediting_69106	chr1_61699080_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6862-3p	61699076	61699082	7mer-m8	61699075	61699100	145.00	-20.55
CAediting_69106	chr1_61699080_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6862-3p	61699076	61699082	7mer-m8	61699075	61699100	145.00	-20.55
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3180-5p	61699138	61699144	7mer-m8	61699137	61699164	152.00	-19.97
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3180-5p	61699138	61699144	7mer-m8	61699137	61699164	152.00	-19.97
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3180-5p	61699138	61699144	7mer-m8	61699137	61699164	152.00	-19.97
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-520a-5p	61699138	61699145	8mer-1a	61699138	61699158	140.00	-13.41
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-525-5p	61699138	61699145	8mer-1a	61699138	61699158	140.00	-14.83
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000488206	hsa-miR-1268a	61724290	61724296	7mer-m8	61724289	61724306	166.00	-35.49
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000488206	hsa-miR-1268b	61724290	61724296	7mer-m8	61724289	61724308	166.00	-35.99
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000494926	hsa-miR-1268a	61724290	61724296	7mer-m8	61724289	61724306	166.00	-35.49
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000494926	hsa-miR-1268b	61724290	61724296	7mer-m8	61724289	61724308	166.00	-35.99
CAediting_69107	chr1_61699098_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3189-3p	61699097	61699103	7mer-m8	61699096	61699115	153.00	-22.40
CAediting_69107	chr1_61699098_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6813-3p	61699096	61699102	7mer-m8	61699095	61699115	140.00	-10.68
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-326	61699097	61699103	7mer-m8	61699096	61699115	140.00	-13.25
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-330-5p	61699097	61699103	7mer-m8	61699096	61699119	141.00	-19.67
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4314	61699098	61699104	7mer-m8	61699097	61699115	141.00	-20.85
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4646-5p	61699098	61699104	7mer-1a	61699098	61699119	140.00	-26.94
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-514a-5p	61699096	61699102	7mer-m8	61699095	61699118	150.00	-18.62
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-514a-5p	61699096	61699102	7mer-m8	61699095	61699118	150.00	-18.62
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-514a-5p	61699096	61699102	7mer-m8	61699095	61699118	150.00	-18.62

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000488206	hsa-miR-4455	61724290	61724296	7mer-m8	61724289	61724304	146	-16.9
CAediting_69021	chr1_61686861_-	ENSG00000162604.11	ENST00000468586	hsa-miR-106a-3p	61686861	61686867	7mer-m8	61686860	61686881	140	-13.17
CAediting_69017	chr1_61686837_-	ENSG00000162604.11	ENST00000468586	hsa-miR-4445-5p	61686834	61686840	7mer-m8	61686833	61686854	145	-12.09
CAediting_69018	chr1_61686839_-	ENSG00000162604.11	ENST00000468586	hsa-miR-4445-5p	61686834	61686840	7mer-m8	61686833	61686854	145	-12.09
CAediting_69021	chr1_61686861_-	ENSG00000162604.11	ENST00000468586	hsa-miR-485-5p	61686856	61686862	7mer-m8	61686855	61686875	150	-15.77
CAediting_69340	chr1_61724293_-	ENSG00000162604.11	ENST00000494926	hsa-miR-4455	61724290	61724296	7mer-m8	61724289	61724304	146	-16.9
CAediting_69101	chr1_61698349_-	ENSG00000162604.11	ENST00000371177	hsa-miR-1258	61698347	61698353	7mer-m8	61698346	61698369	146	-13.79
CAediting_69103	chr1_61698377_-	ENSG00000162604.11	ENST00000371177	hsa-miR-1843	61698376	61698381	6mer	61698375	61698395	148	-25.98
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3168	61699136	61699142	7mer-m8	61699135	61699150	153	-17.06
CAediting_69111	chr1_61699177_-	ENSG00000162604.11	ENST00000371177	hsa-miR-3675-3p	61699172	61699178	7mer-m8	61699171	61699192	153	-16.36
CAediting_69102	chr1_61698368_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4293	61698364	61698370	7mer-m8	61698363	61698379	146	-21.19
CAediting_69103	chr1_61698377_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4531	61698377	61698383	7mer-m8	61698376	61698392	151	-18.2
CAediting_69111	chr1_61699177_-	ENSG00000162604.11	ENST00000371177	hsa-miR-4684-5p	61699173	61699179	7mer-m8	61699172	61699193	147	-11.58
CAediting_69109	chr1_61699108_-	ENSG00000162604.11	ENST00000371177	hsa-miR-485-5p	61699103	61699109	7mer-m8	61699102	61699121	150	-18.72
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-518d-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-518e-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-518f-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-13.68
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-519a-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-519b-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-519c-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-520c-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-522-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-523-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-526a-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69110	chr1_61699141_-	ENSG00000162604.11	ENST00000371177	hsa-miR-526a-5p	61699138	61699145	8mer-1a	61699138	61699156	142	-14.03
CAediting_69104	chr1_61698527_-	ENSG00000162604.11	ENST00000371177	hsa-miR-5684	61698523	61698528	6mer	61698522	61698541	150	-24.17
CAediting_69101	chr1_61698349_-	ENSG00000162604.11	ENST00000371177	hsa-miR-655-5p	61698343	61698350	8mer-1a	61698343	61698364	141	-9.35
CAediting_69106	chr1_61699080_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6870-3p	61699076	61699082	7mer-m8	61699075	61699097	148	-22.97
CAediting_69109	chr1_61699108_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6884-5p	61699103	61699109	7mer-m8	61699102	61699125	154	-22.91
CAediting_69109	chr1_61699108_-	ENSG00000162604.11	ENST00000371177	hsa-miR-7160-5p	61699106	61699112	7mer-m8	61699105	61699125	150	-20.04
CAediting_69108	chr1_61699099_-	ENSG00000162604.11	ENST00000371177	hsa-miR-887-5p	61699098	61699105	8mer-1a	61699098	61699120	145	-13.62

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000162604.11	ENST00000371177	hsa-miR-4423-3p	61698860	61698866	7mer-m8	61698859	61698881	145	-20.09
CAediting_1399425	chr20_1392958_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6869-5p	61699964	61699970	7mer-m8	61699963	61699984	151	-22.45
CAediting_524911	chr7_5495852_-	ENSG00000162604.11	ENST00000371177	hsa-miR-589-3p	61700011	61700017	7mer-m8	61700010	61700033	140	-10.74

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1160181	chr17_7017644_-	ENSG00000162604.11	ENST00000371177	hsa-miR-195-3p	61697908	61697914	7mer-m8	61697907	61697930	141	-13.14
CAediting_1399425	chr20_1392958_-	ENSG00000162604.11	ENST00000371177	hsa-miR-6869-5p	61698843	61698850	8mer-1a	61698843	61698864	141	-15.54

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TM2D1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000488206.4	nonsense_mediated_decay
ENST00000468586.4	nonsense_mediated_decay
ENST00000488410.4	processed_transcript
ENST00000494926.4	nonsense_mediated_decay
ENST00000371177.2	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_69340	ENST00000488206.4	chr1_61724293_-	-283.60	-283.60	-292.90
CAediting_69341	ENST00000488206.4	chr1_61724321_-	-288.20	-283.60	-292.90
CAediting_69342	ENST00000488206.4	chr1_61724397_-	-288.40	-283.60	-292.90
CAediting_69017	ENST00000468586.4	chr1_61686837_-	-187.10	-187.40	-189.30
CAediting_69018	ENST00000468586.4	chr1_61686839_-	-187.40	-187.40	-189.30
CAediting_69019	ENST00000468586.4	chr1_61686840_-	-187.40	-187.40	-189.30
CAediting_69020	ENST00000468586.4	chr1_61686841_-	-188.20	-187.40	-189.30
CAediting_69021	ENST00000468586.4	chr1_61686861_-	-187.60	-187.40	-189.30
CAediting_69022	ENST00000468586.4	chr1_61686871_-	-187.40	-187.40	-189.30
CAediting_69023	ENST00000468586.4	chr1_61686876_-	-187.40	-187.40	-189.30
CAediting_69024	ENST00000468586.4	chr1_61686885_-	-186.60	-187.40	-189.30
CAediting_69017	ENST00000488410.4	chr1_61686837_-	-104.30	-104.60	-108.10
CAediting_69018	ENST00000488410.4	chr1_61686839_-	-108.90	-104.60	-108.10
CAediting_69019	ENST00000488410.4	chr1_61686840_-	-109.20	-104.60	-108.10
CAediting_69020	ENST00000488410.4	chr1_61686841_-	-107.20	-104.60	-108.10
CAediting_69021	ENST00000488410.4	chr1_61686861_-	-104.50	-104.60	-108.10
CAediting_69022	ENST00000488410.4	chr1_61686871_-	-104.70	-104.60	-108.10
CAediting_69023	ENST00000488410.4	chr1_61686876_-	-104.60	-104.60	-108.10
CAediting_69024	ENST00000488410.4	chr1_61686885_-	-103.80	-104.60	-108.10
CAediting_69025	ENST00000488410.4	chr1_61686917_-	-103.80	-104.60	-108.10
CAediting_69340	ENST00000494926.4	chr1_61724293_-	-189.40	-188.60	-190.50
CAediting_69341	ENST00000494926.4	chr1_61724321_-	-188.50	-188.60	-190.50
CAediting_69342	ENST00000494926.4	chr1_61724397_-	-188.60	-188.60	-190.50
CAediting_69101	ENST00000371177.2	chr1_61698349_-	-946.60	-947.30	-953.50
CAediting_69102	ENST00000371177.2	chr1_61698368_-	-946.60	-947.30	-953.50
CAediting_69103	ENST00000371177.2	chr1_61698377_-	-949.90	-947.30	-953.50
CAediting_69104	ENST00000371177.2	chr1_61698527_-	-947.30	-947.30	-953.50
CAediting_69105	ENST00000371177.2	chr1_61698835_-	-946.40	-947.30	-953.50
CAediting_69106	ENST00000371177.2	chr1_61699080_-	-949.40	-947.30	-953.50
CAediting_69107	ENST00000371177.2	chr1_61699098_-	-947.30	-947.30	-953.50
CAediting_69108	ENST00000371177.2	chr1_61699099_-	-949.10	-947.30	-953.50
CAediting_69109	ENST00000371177.2	chr1_61699108_-	-946.50	-947.30	-953.50
CAediting_69110	ENST00000371177.2	chr1_61699141_-	-946.10	-947.30	-953.50
CAediting_69111	ENST00000371177.2	chr1_61699177_-	-947.90	-947.30	-953.50

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Relation with ADAR for TM2D1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_69094	chr1_61697456_-	0.0179755775265029	0.282114672780984	.	.	.	.

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Relation with cancer stages for TM2D1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TM2D1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TM2D1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TM2D1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene