|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: SETDB2 (CAeditome ID:83852) |
Gene summary for SETDB2 |
Gene summary |
Gene information | Gene symbol | SETDB2 | Gene ID | 83852 |
Gene name | SET domain bifurcated histone lysine methyltransferase 2 | |
Synonyms | C13orf4|CLLD8|CLLL8|KMT1F | |
Cytomap | 13q14.2 | |
Type of gene | protein-coding | |
Description | histone-lysine N-methyltransferase SETDB2SET domain bifurcated 2chronic lymphocytic leukemia deletion region gene 8 proteinlysine N-methyltransferase 1F | |
Modification date | 20210518 | |
UniProtAcc | Q96T68 | |
Context | - 32549764(SETDB2 promoted breast cancer stem cell maintenance by interaction with and stabilization of DeltaNp63alpha protein) |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
SETDB2 | GO:0046974 | Histone-lysine N-methyltransferase SETDB2 | 20404330 |
SETDB2 | GO:0051567 | Histone-lysine N-methyltransferase SETDB2 | 20404330 |
SETDB2 | GO:0005634 | Histone-lysine N-methyltransferase SETDB2 | 20404330 |
SETDB2 | GO:0005654 | Histone-lysine N-methyltransferase SETDB2 | 0000052 |
SETDB2 | GO:0005829 | Histone-lysine N-methyltransferase SETDB2 | 0000052 |
Top |
RNA A-to-I events for SETDB2 |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000136169.15 |
RNA A-to-I editing events in Cancer. |
CAediting_963880(49445727, +), CAediting_963881(49445753, +), CAediting_963882(49445863, +), CAediting_963883(49454167, +), CAediting_963884(49463059, +), CAediting_963885(49463099, +), CAediting_963886(49463109, +), CAediting_963887(49463220, +), CAediting_963888(49463272, +), CAediting_963889(49463273, +), CAediting_963890(49464806, +), CAediting_963891(49464815, +), CAediting_963892(49464820, +), CAediting_963893(49464912, +), CAediting_963894(49464913, +), CAediting_963895(49464916, +), CAediting_963896(49464919, +), CAediting_963897(49464959, +), CAediting_963898(49464960, +), CAediting_963899(49464969, +), CAediting_963900(49464991, +), CAediting_963901(49465011, +), CAediting_963902(49465023, +), CAediting_963903(49465049, +), CAediting_963904(49465666, +), CAediting_963905(49465702, +), CAediting_963906(49465798, +), CAediting_963907(49466170, +), CAediting_963908(49466178, +), CAediting_963909(49466214, +), CAediting_963910(49466308, +), CAediting_963911(49466314, +), CAediting_963912(49466338, +), CAediting_963913(49466344, +), CAediting_963914(49466355, +), CAediting_963915(49466360, +), CAediting_963916(49466374, +), CAediting_963917(49466423, +), CAediting_963918(49466424, +), CAediting_963919(49466666, +), CAediting_963920(49466777, +), CAediting_963921(49466876, +), CAediting_963922(49466877, +), CAediting_963923(49466878, +), CAediting_963924(49466891, +), CAediting_963925(49466894, +), CAediting_963926(49466918, +), CAediting_963927(49467188, +), CAediting_963928(49467216, +), CAediting_963929(49467320, +), CAediting_963930(49467336, +), CAediting_963931(49467345, +), CAediting_963932(49467352, +), CAediting_963933(49470586, +), CAediting_963934(49470593, +), CAediting_963935(49471174, +), CAediting_963936(49473272, +), CAediting_963937(49473317, +), CAediting_963938(49473321, +), CAediting_963939(49473340, +), CAediting_963940(49473392, +), CAediting_963941(49473453, +), CAediting_963942(49473476, +), CAediting_963943(49473483, +), CAediting_963944(49473501, +), CAediting_963945(49475518, +), CAediting_963946(49475530, +), CAediting_963947(49475572, +), CAediting_963948(49475581, +), CAediting_963949(49475587, +), CAediting_963950(49475599, +), CAediting_963951(49475604, +), CAediting_963952(49475678, +), CAediting_963953(49476166, +), CAediting_963954(49483654, +), CAediting_963955(49484350, +), CAediting_963956(49485030, +), CAediting_963957(49486052, +), CAediting_963958(49486066, +), CAediting_963959(49486074, +), CAediting_963960(49486082, +), CAediting_963961(49486083, +), CAediting_963962(49486088, +), CAediting_963963(49486131, +), CAediting_963964(49486158, +), CAediting_963965(49486183, +), CAediting_963966(49486190, +), CAediting_963967(49486194, +), CAediting_963968(49486198, +), CAediting_963969(49486243, +), CAediting_963970(49486250, +), CAediting_963971(49486253, +), CAediting_963972(49487359, +), CAediting_963973(49487363, +), CAediting_963974(49487367, +), CAediting_963975(49487375, +), CAediting_963976(49487380, +), CAediting_963977(49487403, +), CAediting_963978(49487405, +), CAediting_963979(49487410, +), CAediting_963980(49487437, +), CAediting_963981(49487439, +), CAediting_963982(49487466, +), CAediting_963983(49487526, +), CAediting_963984(49487578, +), CAediting_963985(49489119, +), CAediting_963986(49489167, +), CAediting_963987(49489168, +), CAediting_963988(49489173, +), CAediting_963989(49489203, +), CAediting_963990(49489207, +), CAediting_963991(49489238, +), CAediting_963992(49490067, +), CAediting_963993(49490159, +), CAediting_963994(49490189, +), CAediting_963995(49490195, +), CAediting_963996(49490200, +), CAediting_963997(49490201, +), CAediting_963998(49490205, +), CAediting_963999(49490214, +), CAediting_964000(49490225, +), CAediting_964001(49490229, +), CAediting_964002(49490991, +), CAediting_964003(49491135, +), CAediting_964004(49491139, +), CAediting_964005(49491157, +), CAediting_964006(49492695, +), CAediting_964007(49492704, +), CAediting_964008(49492709, +), CAediting_964009(49492712, +), CAediting_964010(49492726, +), CAediting_964011(49492739, +), CAediting_964012(49492744, +), CAediting_964013(49492757, +), CAediting_964014(49492758, +), CAediting_964015(49492781, +), CAediting_964016(49492799, +), CAediting_964017(49492807, +), CAediting_964018(49492808, +), CAediting_964019(49492812, +), CAediting_964020(49492828, +), CAediting_964021(49492848, +), CAediting_964022(49492852, +), CAediting_964023(49492882, +), CAediting_964024(49492885, +), CAediting_964025(49492890, +), CAediting_964026(49492891, +), CAediting_964027(49492899, +), CAediting_964028(49492945, +), CAediting_964029(49492946, +), |
Top |
RNA editing positional annotations for SETDB2 using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_963880 | chr13_49445727_+ | ncRNA_exonic |
CAediting_963881 | chr13_49445753_+ | ncRNA_exonic |
CAediting_963882 | chr13_49445863_+ | ncRNA_exonic |
CAediting_963883 | chr13_49454167_+ | intronic |
CAediting_963884 | chr13_49463059_+ | intronic |
CAediting_963885 | chr13_49463099_+ | intronic |
CAediting_963886 | chr13_49463109_+ | intronic |
CAediting_963887 | chr13_49463220_+ | intronic |
CAediting_963888 | chr13_49463272_+ | intronic |
CAediting_963889 | chr13_49463273_+ | intronic |
CAediting_963890 | chr13_49464806_+ | intronic |
CAediting_963891 | chr13_49464815_+ | intronic |
CAediting_963892 | chr13_49464820_+ | intronic |
CAediting_963893 | chr13_49464912_+ | intronic |
CAediting_963894 | chr13_49464913_+ | intronic |
CAediting_963895 | chr13_49464916_+ | intronic |
CAediting_963896 | chr13_49464919_+ | intronic |
CAediting_963897 | chr13_49464959_+ | intronic |
CAediting_963898 | chr13_49464960_+ | intronic |
CAediting_963899 | chr13_49464969_+ | intronic |
CAediting_963900 | chr13_49464991_+ | intronic |
CAediting_963901 | chr13_49465011_+ | intronic |
CAediting_963902 | chr13_49465023_+ | intronic |
CAediting_963903 | chr13_49465049_+ | intronic |
CAediting_963904 | chr13_49465666_+ | intronic |
CAediting_963905 | chr13_49465702_+ | intronic |
CAediting_963906 | chr13_49465798_+ | intronic |
CAediting_963907 | chr13_49466170_+ | intronic |
CAediting_963908 | chr13_49466178_+ | intronic |
CAediting_963909 | chr13_49466214_+ | intronic |
CAediting_963910 | chr13_49466308_+ | intronic |
CAediting_963911 | chr13_49466314_+ | intronic |
CAediting_963912 | chr13_49466338_+ | intronic |
CAediting_963913 | chr13_49466344_+ | intronic |
CAediting_963914 | chr13_49466355_+ | intronic |
CAediting_963915 | chr13_49466360_+ | intronic |
CAediting_963916 | chr13_49466374_+ | intronic |
CAediting_963917 | chr13_49466423_+ | intronic |
CAediting_963918 | chr13_49466424_+ | intronic |
CAediting_963919 | chr13_49466666_+ | intronic |
CAediting_963920 | chr13_49466777_+ | intronic |
CAediting_963921 | chr13_49466876_+ | intronic |
CAediting_963922 | chr13_49466877_+ | intronic |
CAediting_963923 | chr13_49466878_+ | intronic |
CAediting_963924 | chr13_49466891_+ | intronic |
CAediting_963925 | chr13_49466894_+ | intronic |
CAediting_963926 | chr13_49466918_+ | intronic |
CAediting_963927 | chr13_49467188_+ | intronic |
CAediting_963928 | chr13_49467216_+ | intronic |
CAediting_963929 | chr13_49467320_+ | intronic |
CAediting_963930 | chr13_49467336_+ | intronic |
CAediting_963931 | chr13_49467345_+ | intronic |
CAediting_963932 | chr13_49467352_+ | intronic |
CAediting_963933 | chr13_49470586_+ | intronic |
CAediting_963934 | chr13_49470593_+ | intronic |
CAediting_963935 | chr13_49471174_+ | intronic |
CAediting_963936 | chr13_49473272_+ | intronic |
CAediting_963937 | chr13_49473317_+ | intronic |
CAediting_963938 | chr13_49473321_+ | intronic |
CAediting_963939 | chr13_49473340_+ | intronic |
CAediting_963940 | chr13_49473392_+ | intronic |
CAediting_963941 | chr13_49473453_+ | intronic |
CAediting_963942 | chr13_49473476_+ | intronic |
CAediting_963943 | chr13_49473483_+ | intronic |
CAediting_963944 | chr13_49473501_+ | intronic |
CAediting_963945 | chr13_49475518_+ | intronic |
CAediting_963946 | chr13_49475530_+ | intronic |
CAediting_963947 | chr13_49475572_+ | intronic |
CAediting_963948 | chr13_49475581_+ | intronic |
CAediting_963949 | chr13_49475587_+ | intronic |
CAediting_963950 | chr13_49475599_+ | intronic |
CAediting_963951 | chr13_49475604_+ | intronic |
CAediting_963952 | chr13_49475678_+ | intronic |
CAediting_963953 | chr13_49476166_+ | intronic |
CAediting_963954 | chr13_49483654_+ | intronic |
CAediting_963955 | chr13_49484350_+ | intronic |
CAediting_963956 | chr13_49485030_+ | intronic |
CAediting_963957 | chr13_49486052_+ | intronic |
CAediting_963958 | chr13_49486066_+ | intronic |
CAediting_963959 | chr13_49486074_+ | intronic |
CAediting_963960 | chr13_49486082_+ | intronic |
CAediting_963961 | chr13_49486083_+ | intronic |
CAediting_963962 | chr13_49486088_+ | intronic |
CAediting_963963 | chr13_49486131_+ | intronic |
CAediting_963964 | chr13_49486158_+ | intronic |
CAediting_963965 | chr13_49486183_+ | intronic |
CAediting_963966 | chr13_49486190_+ | intronic |
CAediting_963967 | chr13_49486194_+ | intronic |
CAediting_963968 | chr13_49486198_+ | intronic |
CAediting_963969 | chr13_49486243_+ | intronic |
CAediting_963970 | chr13_49486250_+ | intronic |
CAediting_963971 | chr13_49486253_+ | intronic |
CAediting_963972 | chr13_49487359_+ | intronic |
CAediting_963973 | chr13_49487363_+ | intronic |
CAediting_963974 | chr13_49487367_+ | intronic |
CAediting_963975 | chr13_49487375_+ | intronic |
CAediting_963976 | chr13_49487380_+ | intronic |
CAediting_963977 | chr13_49487403_+ | intronic |
CAediting_963978 | chr13_49487405_+ | intronic |
CAediting_963979 | chr13_49487410_+ | intronic |
CAediting_963980 | chr13_49487437_+ | intronic |
CAediting_963981 | chr13_49487439_+ | intronic |
CAediting_963982 | chr13_49487466_+ | intronic |
CAediting_963983 | chr13_49487526_+ | intronic |
CAediting_963984 | chr13_49487578_+ | intronic |
CAediting_963985 | chr13_49489119_+ | ncRNA_intronic |
CAediting_963986 | chr13_49489167_+ | ncRNA_intronic |
CAediting_963987 | chr13_49489168_+ | ncRNA_intronic |
CAediting_963988 | chr13_49489173_+ | ncRNA_intronic |
CAediting_963989 | chr13_49489203_+ | ncRNA_intronic |
CAediting_963990 | chr13_49489207_+ | ncRNA_intronic |
CAediting_963991 | chr13_49489238_+ | ncRNA_intronic |
CAediting_963992 | chr13_49490067_+ | intronic |
CAediting_963993 | chr13_49490159_+ | intronic |
CAediting_963994 | chr13_49490189_+ | intronic |
CAediting_963995 | chr13_49490195_+ | intronic |
CAediting_963996 | chr13_49490200_+ | intronic |
CAediting_963997 | chr13_49490201_+ | intronic |
CAediting_963998 | chr13_49490205_+ | intronic |
CAediting_963999 | chr13_49490214_+ | intronic |
CAediting_964000 | chr13_49490225_+ | intronic |
CAediting_964001 | chr13_49490229_+ | intronic |
CAediting_964002 | chr13_49490991_+ | intronic |
CAediting_964003 | chr13_49491135_+ | intronic |
CAediting_964004 | chr13_49491139_+ | intronic |
CAediting_964005 | chr13_49491157_+ | intronic |
CAediting_964006 | chr13_49492695_+ | UTR3 |
CAediting_964007 | chr13_49492704_+ | UTR3 |
CAediting_964008 | chr13_49492709_+ | UTR3 |
CAediting_964009 | chr13_49492712_+ | UTR3 |
CAediting_964010 | chr13_49492726_+ | UTR3 |
CAediting_964011 | chr13_49492739_+ | UTR3 |
CAediting_964012 | chr13_49492744_+ | UTR3 |
CAediting_964013 | chr13_49492757_+ | UTR3 |
CAediting_964014 | chr13_49492758_+ | UTR3 |
CAediting_964015 | chr13_49492781_+ | UTR3 |
CAediting_964016 | chr13_49492799_+ | UTR3 |
CAediting_964017 | chr13_49492807_+ | UTR3 |
CAediting_964018 | chr13_49492808_+ | UTR3 |
CAediting_964019 | chr13_49492812_+ | UTR3 |
CAediting_964020 | chr13_49492828_+ | UTR3 |
CAediting_964021 | chr13_49492848_+ | UTR3 |
CAediting_964022 | chr13_49492852_+ | UTR3 |
CAediting_964023 | chr13_49492882_+ | UTR3 |
CAediting_964024 | chr13_49492885_+ | UTR3 |
CAediting_964025 | chr13_49492890_+ | UTR3 |
CAediting_964026 | chr13_49492891_+ | UTR3 |
CAediting_964027 | chr13_49492899_+ | UTR3 |
CAediting_964028 | chr13_49492945_+ | UTR3 |
CAediting_964029 | chr13_49492946_+ | UTR3 |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_963880 | chr13_49445727_+ | SINE | Alu | AluSx1 |
CAediting_963881 | chr13_49445753_+ | SINE | Alu | AluSx1 |
CAediting_963882 | chr13_49445863_+ | SINE | Alu | AluSx1 |
CAediting_963883 | chr13_49454167_+ | SINE | Alu | AluSz6 |
CAediting_963884 | chr13_49463059_+ | SINE | Alu | AluSx |
CAediting_963885 | chr13_49463099_+ | SINE | Alu | AluSx |
CAediting_963886 | chr13_49463109_+ | SINE | Alu | AluSx |
CAediting_963887 | chr13_49463220_+ | SINE | Alu | AluSx |
CAediting_963888 | chr13_49463272_+ | SINE | Alu | AluSx |
CAediting_963889 | chr13_49463273_+ | SINE | Alu | AluSx |
CAediting_963890 | chr13_49464806_+ | SINE | Alu | AluJo |
CAediting_963891 | chr13_49464815_+ | SINE | Alu | AluJo |
CAediting_963892 | chr13_49464820_+ | SINE | Alu | AluJo |
CAediting_963893 | chr13_49464912_+ | SINE | Alu | AluJo |
CAediting_963894 | chr13_49464913_+ | SINE | Alu | AluJo |
CAediting_963895 | chr13_49464916_+ | SINE | Alu | AluJo |
CAediting_963896 | chr13_49464919_+ | SINE | Alu | AluJo |
CAediting_963897 | chr13_49464959_+ | SINE | Alu | AluJo |
CAediting_963898 | chr13_49464960_+ | SINE | Alu | AluJo |
CAediting_963899 | chr13_49464969_+ | SINE | Alu | AluJo |
CAediting_963900 | chr13_49464991_+ | SINE | Alu | AluJo |
CAediting_963901 | chr13_49465011_+ | SINE | Alu | AluJo |
CAediting_963902 | chr13_49465023_+ | SINE | Alu | AluJo |
CAediting_963903 | chr13_49465049_+ | SINE | Alu | AluJo |
CAediting_963904 | chr13_49465666_+ | SINE | Alu | AluSq10 |
CAediting_963905 | chr13_49465702_+ | SINE | Alu | AluSq10 |
CAediting_963906 | chr13_49465798_+ | SINE | Alu | AluSq10 |
CAediting_963907 | chr13_49466170_+ | SINE | Alu | AluJr4 |
CAediting_963908 | chr13_49466178_+ | SINE | Alu | AluJr4 |
CAediting_963909 | chr13_49466214_+ | SINE | Alu | AluJr4 |
CAediting_963910 | chr13_49466308_+ | SINE | Alu | AluJr4 |
CAediting_963911 | chr13_49466314_+ | SINE | Alu | AluJr4 |
CAediting_963912 | chr13_49466338_+ | SINE | Alu | AluJr4 |
CAediting_963913 | chr13_49466344_+ | SINE | Alu | AluJr4 |
CAediting_963914 | chr13_49466355_+ | SINE | Alu | AluJr4 |
CAediting_963915 | chr13_49466360_+ | SINE | Alu | AluJr4 |
CAediting_963916 | chr13_49466374_+ | SINE | Alu | AluJr4 |
CAediting_963917 | chr13_49466423_+ | SINE | Alu | AluJr4 |
CAediting_963918 | chr13_49466424_+ | SINE | Alu | AluJr4 |
CAediting_963919 | chr13_49466666_+ | SINE | Alu | AluJr |
CAediting_963920 | chr13_49466777_+ | SINE | Alu | AluJr |
CAediting_963921 | chr13_49466876_+ | SINE | Alu | AluJr |
CAediting_963922 | chr13_49466877_+ | SINE | Alu | AluJr |
CAediting_963923 | chr13_49466878_+ | SINE | Alu | AluJr |
CAediting_963924 | chr13_49466891_+ | SINE | Alu | AluJr |
CAediting_963925 | chr13_49466894_+ | SINE | Alu | AluJr |
CAediting_963926 | chr13_49466918_+ | SINE | Alu | AluJr |
CAediting_963927 | chr13_49467188_+ | SINE | Alu | AluSz |
CAediting_963928 | chr13_49467216_+ | SINE | Alu | AluSz |
CAediting_963929 | chr13_49467320_+ | SINE | Alu | AluSz |
CAediting_963930 | chr13_49467336_+ | SINE | Alu | AluSz |
CAediting_963931 | chr13_49467345_+ | SINE | Alu | AluSz |
CAediting_963932 | chr13_49467352_+ | SINE | Alu | AluSz |
CAediting_963933 | chr13_49470586_+ | SINE | Alu | AluJb |
CAediting_963934 | chr13_49470593_+ | SINE | Alu | AluJb |
CAediting_963935 | chr13_49471174_+ | SINE | Alu | AluJr |
CAediting_963936 | chr13_49473272_+ | SINE | Alu | AluJb |
CAediting_963937 | chr13_49473317_+ | SINE | Alu | AluJb |
CAediting_963938 | chr13_49473321_+ | SINE | Alu | AluJb |
CAediting_963939 | chr13_49473340_+ | SINE | Alu | AluJb |
CAediting_963940 | chr13_49473392_+ | SINE | Alu | AluJb |
CAediting_963941 | chr13_49473453_+ | SINE | Alu | AluJb |
CAediting_963942 | chr13_49473476_+ | SINE | Alu | AluJb |
CAediting_963943 | chr13_49473483_+ | SINE | Alu | AluJb |
CAediting_963944 | chr13_49473501_+ | SINE | Alu | AluJb |
CAediting_963945 | chr13_49475518_+ | SINE | Alu | AluJb |
CAediting_963946 | chr13_49475530_+ | SINE | Alu | AluJb |
CAediting_963947 | chr13_49475572_+ | SINE | Alu | AluJb |
CAediting_963948 | chr13_49475581_+ | SINE | Alu | AluJb |
CAediting_963949 | chr13_49475587_+ | SINE | Alu | AluJb |
CAediting_963950 | chr13_49475599_+ | SINE | Alu | AluJb |
CAediting_963951 | chr13_49475604_+ | SINE | Alu | AluJb |
CAediting_963952 | chr13_49475678_+ | SINE | Alu | AluJb |
CAediting_963953 | chr13_49476166_+ | SINE | Alu | FAM |
CAediting_963954 | chr13_49483654_+ | SINE | Alu | AluJo |
CAediting_963955 | chr13_49484350_+ | SINE | Alu | AluSq2 |
CAediting_963956 | chr13_49485030_+ | SINE | MIR | MIRb |
CAediting_963957 | chr13_49486052_+ | SINE | Alu | AluJr4 |
CAediting_963958 | chr13_49486066_+ | SINE | Alu | AluJr4 |
CAediting_963959 | chr13_49486074_+ | SINE | Alu | AluJr4 |
CAediting_963960 | chr13_49486082_+ | SINE | Alu | AluJr4 |
CAediting_963961 | chr13_49486083_+ | SINE | Alu | AluJr4 |
CAediting_963962 | chr13_49486088_+ | SINE | Alu | AluJr4 |
CAediting_963963 | chr13_49486131_+ | SINE | Alu | AluJr4 |
CAediting_963964 | chr13_49486158_+ | SINE | Alu | AluJr4 |
CAediting_963965 | chr13_49486183_+ | SINE | Alu | AluJr4 |
CAediting_963966 | chr13_49486190_+ | SINE | Alu | AluJr4 |
CAediting_963967 | chr13_49486194_+ | SINE | Alu | AluJr4 |
CAediting_963968 | chr13_49486198_+ | SINE | Alu | AluJr4 |
CAediting_963969 | chr13_49486243_+ | SINE | Alu | AluJr4 |
CAediting_963970 | chr13_49486250_+ | SINE | Alu | AluJr4 |
CAediting_963971 | chr13_49486253_+ | SINE | Alu | AluJr4 |
CAediting_963972 | chr13_49487359_+ | SINE | Alu | AluJr4 |
CAediting_963973 | chr13_49487363_+ | SINE | Alu | AluJr4 |
CAediting_963974 | chr13_49487367_+ | SINE | Alu | AluJr4 |
CAediting_963975 | chr13_49487375_+ | SINE | Alu | AluJr4 |
CAediting_963976 | chr13_49487380_+ | SINE | Alu | AluJr4 |
CAediting_963977 | chr13_49487403_+ | SINE | Alu | AluJr4 |
CAediting_963978 | chr13_49487405_+ | SINE | Alu | AluJr4 |
CAediting_963979 | chr13_49487410_+ | SINE | Alu | AluJr4 |
CAediting_963980 | chr13_49487437_+ | SINE | Alu | AluJr4 |
CAediting_963981 | chr13_49487439_+ | SINE | Alu | AluJr4 |
CAediting_963982 | chr13_49487466_+ | SINE | Alu | AluJr4 |
CAediting_963983 | chr13_49487526_+ | SINE | Alu | AluJr4 |
CAediting_963984 | chr13_49487578_+ | SINE | Alu | AluJr4 |
CAediting_963985 | chr13_49489119_+ | SINE | Alu | AluSz6 |
CAediting_963986 | chr13_49489167_+ | SINE | Alu | AluSz6 |
CAediting_963987 | chr13_49489168_+ | SINE | Alu | AluSz6 |
CAediting_963988 | chr13_49489173_+ | SINE | Alu | AluSz6 |
CAediting_963989 | chr13_49489203_+ | SINE | Alu | AluSz6 |
CAediting_963990 | chr13_49489207_+ | SINE | Alu | AluSz6 |
CAediting_963991 | chr13_49489238_+ | SINE | Alu | AluSz6 |
CAediting_963992 | chr13_49490067_+ | SINE | Alu | AluSz6 |
CAediting_963993 | chr13_49490159_+ | SINE | Alu | AluSz6 |
CAediting_963994 | chr13_49490189_+ | SINE | Alu | AluSz6 |
CAediting_963995 | chr13_49490195_+ | SINE | Alu | AluSz6 |
CAediting_963996 | chr13_49490200_+ | SINE | Alu | AluSz6 |
CAediting_963997 | chr13_49490201_+ | SINE | Alu | AluSz6 |
CAediting_963998 | chr13_49490205_+ | SINE | Alu | AluSz6 |
CAediting_963999 | chr13_49490214_+ | SINE | Alu | AluSz6 |
CAediting_964000 | chr13_49490225_+ | SINE | Alu | AluSz6 |
CAediting_964001 | chr13_49490229_+ | SINE | Alu | AluSz6 |
CAediting_964002 | chr13_49490991_+ | SINE | Alu | AluJb |
CAediting_964003 | chr13_49491135_+ | SINE | Alu | AluJb |
CAediting_964004 | chr13_49491139_+ | SINE | Alu | AluJb |
CAediting_964005 | chr13_49491157_+ | SINE | Alu | AluJb |
CAediting_964006 | chr13_49492695_+ | SINE | Alu | AluJb |
CAediting_964007 | chr13_49492704_+ | SINE | Alu | AluJb |
CAediting_964008 | chr13_49492709_+ | SINE | Alu | AluJb |
CAediting_964009 | chr13_49492712_+ | SINE | Alu | AluJb |
CAediting_964010 | chr13_49492726_+ | SINE | Alu | AluJb |
CAediting_964011 | chr13_49492739_+ | SINE | Alu | AluJb |
CAediting_964012 | chr13_49492744_+ | SINE | Alu | AluJb |
CAediting_964013 | chr13_49492757_+ | SINE | Alu | AluJb |
CAediting_964014 | chr13_49492758_+ | SINE | Alu | AluJb |
CAediting_964015 | chr13_49492781_+ | SINE | Alu | AluJb |
CAediting_964016 | chr13_49492799_+ | SINE | Alu | AluJb |
CAediting_964017 | chr13_49492807_+ | SINE | Alu | AluJb |
CAediting_964018 | chr13_49492808_+ | SINE | Alu | AluJb |
CAediting_964019 | chr13_49492812_+ | SINE | Alu | AluJb |
CAediting_964020 | chr13_49492828_+ | SINE | Alu | AluJb |
CAediting_964021 | chr13_49492848_+ | SINE | Alu | AluJb |
CAediting_964022 | chr13_49492852_+ | SINE | Alu | AluJb |
CAediting_964023 | chr13_49492882_+ | SINE | Alu | AluJb |
CAediting_964024 | chr13_49492885_+ | SINE | Alu | AluJb |
CAediting_964025 | chr13_49492890_+ | SINE | Alu | AluJb |
CAediting_964026 | chr13_49492891_+ | SINE | Alu | AluJb |
CAediting_964027 | chr13_49492899_+ | SINE | Alu | AluJb |
CAediting_964028 | chr13_49492945_+ | SINE | Alu | AluJb |
CAediting_964029 | chr13_49492946_+ | SINE | Alu | AluJb |
Top |
RNA A-to-I editing events in the alternative splicing sites for SETDB2 |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
ES | CAediting_963903 | chr13_49465049_+ | 49465048:49465056 | 5SS | 2+0i | TAGGCAAGA | 1.39 | TGGGCAAGA | 1.15 |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000136169.15.SETDB2. |
Correlation between RNA A-to-I editing and PSI for ENSG00000136169.15.SETDB2. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for SETDB2 |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
SKCM.CAediting_963897.ENSG00000136169.SETDB2.png |
Top |
Protein coding region RNA A-to-I editings for SETDB2 |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
Top |
The effects of the RNA editing to the miRNA binding sites for SETDB2 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-615-3p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 140.00 | -21.05 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-615-3p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 140.00 | -21.05 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-615-3p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 140.00 | -21.05 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-371a-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 147.00 | -19.36 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-371a-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 147.00 | -19.36 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-371a-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 147.00 | -19.36 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518b | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -21.80 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518c-3p | 49492709 | 49492715 | 7mer-m8 | 49492694 | 49492716 | 146.00 | -18.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.84 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518e-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 144.00 | -15.46 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-518f-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.49 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-526a-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -17.72 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518b | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -21.80 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518c-3p | 49492709 | 49492715 | 7mer-m8 | 49492694 | 49492716 | 146.00 | -18.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.84 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518e-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 144.00 | -15.46 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-518f-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.49 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-526a-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -17.72 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518a-3p | 49492709 | 49492715 | 7mer-m8 | 49492695 | 49492716 | 145.00 | -17.16 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518b | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -21.80 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518c-3p | 49492709 | 49492715 | 7mer-m8 | 49492694 | 49492716 | 146.00 | -18.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.84 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518e-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 144.00 | -15.46 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-518f-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 145.00 | -17.49 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-526a-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146.00 | -17.72 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-10396a-3p | 49492722 | 49492729 | 8mer-1a | 49492709 | 49492729 | 160.00 | -27.61 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-10396b-3p | 49492722 | 49492729 | 8mer-1a | 49492708 | 49492729 | 160.00 | -27.74 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1913 | 49492724 | 49492730 | 7mer-m8 | 49492710 | 49492731 | 151.00 | -21.12 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4707-5p | 49492721 | 49492727 | 7mer-m8 | 49492706 | 49492728 | 142.00 | -30.17 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-10396a-3p | 49492722 | 49492729 | 8mer-1a | 49492709 | 49492729 | 160.00 | -27.61 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-10396b-3p | 49492722 | 49492729 | 8mer-1a | 49492708 | 49492729 | 160.00 | -27.74 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1913 | 49492724 | 49492730 | 7mer-m8 | 49492710 | 49492731 | 151.00 | -21.12 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4707-5p | 49492721 | 49492727 | 7mer-m8 | 49492706 | 49492728 | 142.00 | -30.17 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-10396a-3p | 49492722 | 49492729 | 8mer-1a | 49492709 | 49492729 | 160.00 | -27.61 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-10396b-3p | 49492722 | 49492729 | 8mer-1a | 49492708 | 49492729 | 160.00 | -27.74 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1913 | 49492724 | 49492730 | 7mer-m8 | 49492710 | 49492731 | 151.00 | -21.12 |
CAediting_964010 | chr13_49492726_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4707-5p | 49492721 | 49492727 | 7mer-m8 | 49492706 | 49492728 | 142.00 | -30.17 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-3136-3p | 49492740 | 49492746 | 7mer-m8 | 49492726 | 49492747 | 155.00 | -18.80 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4747-3p | 49492742 | 49492748 | 7mer-1a | 49492727 | 49492748 | 143.00 | -24.41 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-7155-3p | 49492740 | 49492746 | 7mer-m8 | 49492729 | 49492747 | 146.00 | -20.25 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-3136-3p | 49492740 | 49492746 | 7mer-m8 | 49492726 | 49492747 | 155.00 | -18.80 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4747-3p | 49492742 | 49492748 | 7mer-1a | 49492727 | 49492748 | 143.00 | -24.41 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-7155-3p | 49492740 | 49492746 | 7mer-m8 | 49492729 | 49492747 | 146.00 | -20.25 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-3136-3p | 49492740 | 49492746 | 7mer-m8 | 49492726 | 49492747 | 155.00 | -18.80 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4747-3p | 49492742 | 49492748 | 7mer-1a | 49492727 | 49492748 | 143.00 | -24.41 |
CAediting_964012 | chr13_49492744_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-7155-3p | 49492740 | 49492746 | 7mer-m8 | 49492729 | 49492747 | 146.00 | -20.25 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-152-5p | 49492778 | 49492784 | 7mer-m8 | 49492763 | 49492785 | 149.00 | -15.96 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-597-3p | 49492779 | 49492784 | 6mer | 49492761 | 49492785 | 140.00 | -23.26 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6719-3p | 49492774 | 49492781 | 8mer-1a | 49492760 | 49492781 | 140.00 | -16.40 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-152-5p | 49492778 | 49492784 | 7mer-m8 | 49492763 | 49492785 | 149.00 | -15.96 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-597-3p | 49492779 | 49492784 | 6mer | 49492761 | 49492785 | 140.00 | -23.26 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6719-3p | 49492774 | 49492781 | 8mer-1a | 49492760 | 49492781 | 140.00 | -16.40 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-152-5p | 49492778 | 49492784 | 7mer-m8 | 49492763 | 49492785 | 149.00 | -15.96 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-597-3p | 49492779 | 49492784 | 6mer | 49492761 | 49492785 | 140.00 | -23.26 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6719-3p | 49492774 | 49492781 | 8mer-1a | 49492760 | 49492781 | 140.00 | -16.40 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-630 | 49492797 | 49492804 | 8mer-1a | 49492783 | 49492804 | 149.00 | -16.15 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6844 | 49492793 | 49492800 | 8mer-1a | 49492780 | 49492800 | 140.00 | -10.29 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-630 | 49492797 | 49492804 | 8mer-1a | 49492783 | 49492804 | 149.00 | -16.15 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6844 | 49492793 | 49492800 | 8mer-1a | 49492780 | 49492800 | 140.00 | -10.29 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-630 | 49492797 | 49492804 | 8mer-1a | 49492783 | 49492804 | 149.00 | -16.15 |
CAediting_964016 | chr13_49492799_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6844 | 49492793 | 49492800 | 8mer-1a | 49492780 | 49492800 | 140.00 | -10.29 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-578 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 145.00 | -7.69 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-643 | 49492800 | 49492807 | 8mer-1a | 49492786 | 49492807 | 140.00 | -10.49 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-578 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 145.00 | -7.69 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-643 | 49492800 | 49492807 | 8mer-1a | 49492786 | 49492807 | 140.00 | -10.49 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-578 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 145.00 | -7.69 |
CAediting_964017 | chr13_49492807_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-643 | 49492800 | 49492807 | 8mer-1a | 49492786 | 49492807 | 140.00 | -10.49 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6844 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 152.00 | -7.49 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6844 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 152.00 | -7.49 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6844 | 49492802 | 49492808 | 7mer-m8 | 49492789 | 49492809 | 152.00 | -7.49 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1972 | 49492810 | 49492816 | 7mer-m8 | 49492796 | 49492817 | 141.00 | -18.48 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-122-3p | 49492822 | 49492828 | 7mer-m8 | 49492806 | 49492829 | 162.00 | -16.98 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-122-3p | 49492822 | 49492828 | 7mer-m8 | 49492806 | 49492829 | 162.00 | -16.98 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-122-3p | 49492822 | 49492828 | 7mer-m8 | 49492806 | 49492829 | 162.00 | -16.98 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-2276-5p | 49492880 | 49492886 | 7mer-m8 | 49492867 | 49492887 | 144.00 | -15.88 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-3921 | 49492878 | 49492884 | 7mer-m8 | 49492862 | 49492885 | 154.00 | -20.18 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4653-5p | 49492878 | 49492884 | 7mer-m8 | 49492864 | 49492885 | 147.00 | -16.92 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-2276-5p | 49492880 | 49492886 | 7mer-m8 | 49492867 | 49492887 | 144.00 | -15.88 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-3921 | 49492878 | 49492884 | 7mer-m8 | 49492862 | 49492885 | 154.00 | -20.18 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4653-5p | 49492878 | 49492884 | 7mer-m8 | 49492864 | 49492885 | 147.00 | -16.92 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-2276-5p | 49492880 | 49492886 | 7mer-m8 | 49492867 | 49492887 | 144.00 | -15.88 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-3921 | 49492878 | 49492884 | 7mer-m8 | 49492862 | 49492885 | 154.00 | -20.18 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4653-5p | 49492878 | 49492884 | 7mer-m8 | 49492864 | 49492885 | 147.00 | -16.92 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4732-3p | 49492886 | 49492892 | 7mer-m8 | 49492873 | 49492893 | 155.00 | -27.21 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6779-3p | 49492888 | 49492894 | 7mer-m8 | 49492874 | 49492895 | 149.00 | -17.08 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-7976 | 49492887 | 49492893 | 7mer-m8 | 49492877 | 49492894 | 154.00 | -20.99 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4732-3p | 49492886 | 49492892 | 7mer-m8 | 49492873 | 49492893 | 155.00 | -27.21 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6779-3p | 49492888 | 49492894 | 7mer-m8 | 49492874 | 49492895 | 149.00 | -17.08 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-7976 | 49492887 | 49492893 | 7mer-m8 | 49492877 | 49492894 | 154.00 | -20.99 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4732-3p | 49492886 | 49492892 | 7mer-m8 | 49492873 | 49492893 | 155.00 | -27.21 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6779-3p | 49492888 | 49492894 | 7mer-m8 | 49492874 | 49492895 | 149.00 | -17.08 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-7976 | 49492887 | 49492893 | 7mer-m8 | 49492877 | 49492894 | 154.00 | -20.99 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4418 | 49492893 | 49492899 | 7mer-m8 | 49492883 | 49492900 | 140.00 | -16.87 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-509-3-5p | 49492893 | 49492899 | 7mer-m8 | 49492879 | 49492900 | 159.00 | -22.29 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4418 | 49492893 | 49492899 | 7mer-m8 | 49492883 | 49492900 | 140.00 | -16.87 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-509-3-5p | 49492893 | 49492899 | 7mer-m8 | 49492879 | 49492900 | 159.00 | -22.29 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4418 | 49492893 | 49492899 | 7mer-m8 | 49492883 | 49492900 | 140.00 | -16.87 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-509-3-5p | 49492893 | 49492899 | 7mer-m8 | 49492879 | 49492900 | 159.00 | -22.29 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-509-5p | 49492893 | 49492899 | 7mer-m8 | 49492881 | 49492900 | 146.00 | -21.61 |
CAediting_964014 | chr13_49492758_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1200 | 49492754 | 49492759 | 6mer | 49492741 | 49492760 | 140.00 | -20.69 |
CAediting_964014 | chr13_49492758_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1200 | 49492754 | 49492759 | 6mer | 49492741 | 49492760 | 140.00 | -20.69 |
CAediting_964014 | chr13_49492758_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1200 | 49492754 | 49492759 | 6mer | 49492741 | 49492760 | 140.00 | -20.69 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-646 | 49492843 | 49492849 | 7mer-m8 | 49492832 | 49492850 | 149.00 | -19.04 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-646 | 49492843 | 49492849 | 7mer-m8 | 49492832 | 49492850 | 149.00 | -19.04 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-646 | 49492843 | 49492849 | 7mer-m8 | 49492832 | 49492850 | 149.00 | -19.04 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_964025 | chr13_49492890_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-10399-5p | 49492698 | 49492704 | 7mer-m8 | 49492688 | 49492705 | 150 | -13.23 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1199-5p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 141 | -17.13 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1200 | 49492848 | 49492854 | 7mer-m8 | 49492836 | 49492855 | 148 | -23.8 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1912-5p | 49492895 | 49492901 | 7mer-m8 | 49492878 | 49492902 | 146 | -18.79 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-2052 | 49492777 | 49492783 | 7mer-m8 | 49492765 | 49492784 | 146 | -8.14 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-302a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 147 | -11.56 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-302b-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.18 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-302c-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.67 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-302e | 49492708 | 49492714 | 7mer-m8 | 49492699 | 49492715 | 141 | -8.62 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4303 | 49492877 | 49492884 | 8mer-1a | 49492868 | 49492884 | 149 | -16.88 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4303 | 49492690 | 49492696 | 7mer-m8 | 49492681 | 49492697 | 142 | -11.95 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-519d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -14.54 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -11.04 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520b-3p | 49492708 | 49492714 | 7mer-m8 | 49492696 | 49492715 | 141 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520c-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 146 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520d-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -13.92 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520e-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 140 | -13.33 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520g-3p | 49492710 | 49492717 | 8mer-1a | 49492694 | 49492717 | 151 | -16.79 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-520h | 49492710 | 49492717 | 8mer-1a | 49492696 | 49492717 | 150 | -15.17 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-526b-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -16.21 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-5589-3p | 49492826 | 49492832 | 7mer-m8 | 49492812 | 49492833 | 153 | -14.99 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6504-3p | 49492698 | 49492704 | 7mer-m8 | 49492684 | 49492705 | 153 | -14.48 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6506-5p | 49492703 | 49492709 | 7mer-m8 | 49492685 | 49492710 | 147 | -17.05 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6751-3p | 49492689 | 49492696 | 8mer-1a | 49492676 | 49492696 | 153 | -15.86 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6805-3p | 49492939 | 49492945 | 7mer-1a | 49492923 | 49492945 | 142 | -18.89 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6807-5p | 49492688 | 49492694 | 7mer-m8 | 49492673 | 49492695 | 149 | -17.47 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-924 | 49492944 | 49492950 | 7mer-m8 | 49492932 | 49492951 | 151 | -19.41 |
CAediting_964025 | chr13_49492890_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-10399-5p | 49492698 | 49492704 | 7mer-m8 | 49492688 | 49492705 | 150 | -13.23 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1199-5p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 141 | -17.13 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1200 | 49492848 | 49492854 | 7mer-m8 | 49492836 | 49492855 | 148 | -23.8 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1912-5p | 49492895 | 49492901 | 7mer-m8 | 49492878 | 49492902 | 146 | -18.79 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-2052 | 49492777 | 49492783 | 7mer-m8 | 49492765 | 49492784 | 146 | -8.14 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-302a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 147 | -11.56 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-302b-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.18 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-302c-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.67 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-302e | 49492708 | 49492714 | 7mer-m8 | 49492699 | 49492715 | 141 | -8.62 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4303 | 49492877 | 49492884 | 8mer-1a | 49492868 | 49492884 | 149 | -16.88 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4303 | 49492690 | 49492696 | 7mer-m8 | 49492681 | 49492697 | 142 | -11.95 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-519d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -14.54 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -11.04 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520b-3p | 49492708 | 49492714 | 7mer-m8 | 49492696 | 49492715 | 141 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520c-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 146 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520d-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -13.92 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520e-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 140 | -13.33 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520g-3p | 49492710 | 49492717 | 8mer-1a | 49492694 | 49492717 | 151 | -16.79 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-520h | 49492710 | 49492717 | 8mer-1a | 49492696 | 49492717 | 150 | -15.17 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-526b-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -16.21 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-5589-3p | 49492826 | 49492832 | 7mer-m8 | 49492812 | 49492833 | 153 | -14.99 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6504-3p | 49492698 | 49492704 | 7mer-m8 | 49492684 | 49492705 | 153 | -14.48 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6506-5p | 49492703 | 49492709 | 7mer-m8 | 49492685 | 49492710 | 147 | -17.05 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6751-3p | 49492689 | 49492696 | 8mer-1a | 49492676 | 49492696 | 153 | -15.86 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6805-3p | 49492939 | 49492945 | 7mer-1a | 49492923 | 49492945 | 142 | -18.89 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6807-5p | 49492688 | 49492694 | 7mer-m8 | 49492673 | 49492695 | 149 | -17.47 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-924 | 49492944 | 49492950 | 7mer-m8 | 49492932 | 49492951 | 151 | -19.41 |
CAediting_964025 | chr13_49492890_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964026 | chr13_49492891_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-10397-5p | 49492886 | 49492892 | 7mer-m8 | 49492872 | 49492893 | 154 | -22.32 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-10399-5p | 49492698 | 49492704 | 7mer-m8 | 49492688 | 49492705 | 150 | -13.23 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1199-5p | 49492689 | 49492696 | 8mer-1a | 49492675 | 49492696 | 141 | -17.13 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1200 | 49492848 | 49492854 | 7mer-m8 | 49492836 | 49492855 | 148 | -23.8 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964024 | chr13_49492885_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1237-3p | 49492880 | 49492886 | 7mer-m8 | 49492865 | 49492887 | 142 | -16.52 |
CAediting_964027 | chr13_49492899_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1912-5p | 49492895 | 49492901 | 7mer-m8 | 49492878 | 49492902 | 146 | -18.79 |
CAediting_964015 | chr13_49492781_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-2052 | 49492777 | 49492783 | 7mer-m8 | 49492765 | 49492784 | 146 | -8.14 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-302a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 147 | -11.56 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-302b-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.18 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-302c-3p | 49492708 | 49492714 | 7mer-m8 | 49492688 | 49492715 | 148 | -12.67 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-302e | 49492708 | 49492714 | 7mer-m8 | 49492699 | 49492715 | 141 | -8.62 |
CAediting_964023 | chr13_49492882_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4303 | 49492877 | 49492884 | 8mer-1a | 49492868 | 49492884 | 149 | -16.88 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4303 | 49492690 | 49492696 | 7mer-m8 | 49492681 | 49492697 | 142 | -11.95 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-431-5p | 49492942 | 49492948 | 7mer-m8 | 49492929 | 49492949 | 140 | -13.39 |
CAediting_964018 | chr13_49492808_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964019 | chr13_49492812_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-4735-5p | 49492806 | 49492812 | 7mer-m8 | 49492792 | 49492813 | 140 | -4.7 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-5089-5p | 49492702 | 49492708 | 7mer-m8 | 49492684 | 49492709 | 149 | -20.89 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-512-3p | 49492707 | 49492713 | 7mer-m8 | 49492688 | 49492714 | 153 | -20.91 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-519d-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -14.54 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520a-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -11.04 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520b-3p | 49492708 | 49492714 | 7mer-m8 | 49492696 | 49492715 | 141 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520c-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 146 | -16.53 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520d-3p | 49492708 | 49492714 | 7mer-m8 | 49492694 | 49492715 | 140 | -13.92 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520e-3p | 49492708 | 49492714 | 7mer-m8 | 49492695 | 49492715 | 140 | -13.33 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520g-3p | 49492710 | 49492717 | 8mer-1a | 49492694 | 49492717 | 151 | -16.79 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-520h | 49492710 | 49492717 | 8mer-1a | 49492696 | 49492717 | 150 | -15.17 |
CAediting_964009 | chr13_49492712_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-526b-3p | 49492709 | 49492715 | 7mer-m8 | 49492696 | 49492716 | 146 | -16.21 |
CAediting_964020 | chr13_49492828_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-5589-3p | 49492826 | 49492832 | 7mer-m8 | 49492812 | 49492833 | 153 | -14.99 |
CAediting_964007 | chr13_49492704_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6504-3p | 49492698 | 49492704 | 7mer-m8 | 49492684 | 49492705 | 153 | -14.48 |
CAediting_964008 | chr13_49492709_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6506-5p | 49492703 | 49492709 | 7mer-m8 | 49492685 | 49492710 | 147 | -17.05 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6751-3p | 49492689 | 49492696 | 8mer-1a | 49492676 | 49492696 | 153 | -15.86 |
CAediting_964028 | chr13_49492945_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6805-3p | 49492939 | 49492945 | 7mer-1a | 49492923 | 49492945 | 142 | -18.89 |
CAediting_964006 | chr13_49492695_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6807-5p | 49492688 | 49492694 | 7mer-m8 | 49492673 | 49492695 | 149 | -17.47 |
CAediting_964021 | chr13_49492848_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964022 | chr13_49492852_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-6869-5p | 49492845 | 49492851 | 7mer-m8 | 49492829 | 49492852 | 152 | -23.28 |
CAediting_964029 | chr13_49492946_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-924 | 49492944 | 49492950 | 7mer-m8 | 49492932 | 49492951 | 151 | -19.41 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_980496 | chr14_31014685_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-624-3p | 49492782 | 49492788 | 7mer-m8 | 49492769 | 49492789 | 164 | -17.82 |
CAediting_980496 | chr14_31014685_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-624-3p | 49492782 | 49492788 | 7mer-m8 | 49492769 | 49492789 | 164 | -17.82 |
CAediting_980496 | chr14_31014685_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-624-3p | 49492782 | 49492788 | 7mer-m8 | 49492769 | 49492789 | 164 | -17.82 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-548aa | 49494440 | 49494446 | 7mer-m8 | 49494426 | 49494447 | 152 | -12.59 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-320e | 49494078 | 49494083 | 6mer | 49494065 | 49494084 | 142 | -20.15 |
CAediting_117844 | chr1_162342605_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-556-3p | 49492933 | 49492939 | 7mer-m8 | 49492920 | 49492940 | 141 | -10.77 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-589-3p | 49494953 | 49494959 | 7mer-m8 | 49494936 | 49494960 | 149 | -16.73 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-548aa | 49494440 | 49494446 | 7mer-m8 | 49494426 | 49494447 | 152 | -12.59 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-320e | 49494078 | 49494083 | 6mer | 49494065 | 49494084 | 142 | -20.15 |
CAediting_117844 | chr1_162342605_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-556-3p | 49492933 | 49492939 | 7mer-m8 | 49492920 | 49492940 | 141 | -10.77 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-589-3p | 49494953 | 49494959 | 7mer-m8 | 49494936 | 49494960 | 149 | -16.73 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-548aa | 49494440 | 49494446 | 7mer-m8 | 49494426 | 49494447 | 152 | -12.59 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-320e | 49494078 | 49494083 | 6mer | 49494065 | 49494084 | 142 | -20.15 |
CAediting_117844 | chr1_162342605_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-556-3p | 49492933 | 49492939 | 7mer-m8 | 49492920 | 49492940 | 141 | -10.77 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-589-3p | 49494953 | 49494959 | 7mer-m8 | 49494936 | 49494960 | 149 | -16.73 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_442554 | chr5_154685830_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-1303 | 49494046 | 49494052 | 7mer-m8 | 49494031 | 49494053 | 153 | -13.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000136169.15 | ENST00000354234 | hsa-miR-200b-3p | 49494255 | 49494261 | 7mer-m8 | 49494243 | 49494262 | 152 | -12.86 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-320e | 49492760 | 49492766 | 7mer-m8 | 49492749 | 49492767 | 149 | -15.66 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-589-3p | 49493905 | 49493911 | 7mer-m8 | 49493889 | 49493912 | 140 | -10.86 |
CAediting_1351755 | chr19_40282625_- | ENSG00000136169.15 | ENST00000354234 | hsa-miR-641 | 49493658 | 49493664 | 7mer-m8 | 49493643 | 49493665 | 151 | -13.34 |
CAediting_442554 | chr5_154685830_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-1303 | 49494046 | 49494052 | 7mer-m8 | 49494031 | 49494053 | 153 | -13.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000136169.15 | ENST00000317257 | hsa-miR-200b-3p | 49494255 | 49494261 | 7mer-m8 | 49494243 | 49494262 | 152 | -12.86 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-320e | 49492760 | 49492766 | 7mer-m8 | 49492749 | 49492767 | 149 | -15.66 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-589-3p | 49493905 | 49493911 | 7mer-m8 | 49493889 | 49493912 | 140 | -10.86 |
CAediting_1351755 | chr19_40282625_- | ENSG00000136169.15 | ENST00000317257 | hsa-miR-641 | 49493658 | 49493664 | 7mer-m8 | 49493643 | 49493665 | 151 | -13.34 |
CAediting_442554 | chr5_154685830_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-1303 | 49494046 | 49494052 | 7mer-m8 | 49494031 | 49494053 | 153 | -13.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000136169.15 | ENST00000611815 | hsa-miR-200b-3p | 49494255 | 49494261 | 7mer-m8 | 49494243 | 49494262 | 152 | -12.86 |
CAediting_1368054 | chr19_46709310_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-320e | 49492760 | 49492766 | 7mer-m8 | 49492749 | 49492767 | 149 | -15.66 |
CAediting_524911 | chr7_5495852_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-589-3p | 49493905 | 49493911 | 7mer-m8 | 49493889 | 49493912 | 140 | -10.86 |
CAediting_1351755 | chr19_40282625_- | ENSG00000136169.15 | ENST00000611815 | hsa-miR-641 | 49493658 | 49493664 | 7mer-m8 | 49493643 | 49493665 | 151 | -13.34 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for SETDB2 |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for SETDB2 |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for SETDB2 |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for SETDB2 |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for SETDB2 |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for SETDB2 |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |