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Editing gene: ATG10 (CAeditome ID:83734)

Gene summary for ATG10

Gene summary

Gene information	Gene symbol	ATG10
	Gene ID	83734
	Gene name	autophagy related 10
	Synonyms	APG10\|APG10L\|pp12616
	Cytomap	5q14.1-q14.2
	Type of gene	protein-coding
	Description	ubiquitin-like-conjugating enzyme ATG10APG10 autophagy 10-likeATG10 autophagy related 10 homologautophagy-related protein 10
	Modification date	20210518
	UniProtAcc	Q9H0Y0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
ATG10	GO:0032446	Ubiquitin-like-conjugating enzyme ATG10	16963840

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RNA A-to-I events for ATG10

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000152348.14

RNA A-to-I editing events in Cancer.

CAediting_419281(81976208, +), CAediting_419282(81976216, +), CAediting_419283(81976221, +), CAediting_419284(81976269, +), CAediting_419285(81976270, +), CAediting_419286(81976271, +), CAediting_419287(81976283, +), CAediting_419288(81977001, +), CAediting_419289(81978918, +), CAediting_419290(81986842, +), CAediting_419291(81986858, +), CAediting_419292(81991584, +), CAediting_419293(81992584, +), CAediting_419294(82021865, +), CAediting_419295(82022104, +), CAediting_419296(82022511, +), CAediting_419297(82022583, +), CAediting_419298(82022584, +), CAediting_419299(82022585, +), CAediting_419300(82035046, +), CAediting_419301(82036855, +), CAediting_419302(82036915, +), CAediting_419303(82037011, +), CAediting_419304(82037052, +), CAediting_419305(82037076, +), CAediting_419306(82057350, +), CAediting_419307(82057364, +), CAediting_419308(82057365, +), CAediting_419309(82062082, +), CAediting_419310(82063137, +), CAediting_419311(82063239, +), CAediting_419312(82063258, +), CAediting_419313(82063310, +), CAediting_419314(82122239, +), CAediting_419315(82122249, +), CAediting_419316(82122297, +), CAediting_419317(82122551, +), CAediting_419318(82122554, +), CAediting_419319(82122562, +), CAediting_419320(82122605, +), CAediting_419321(82122672, +), CAediting_419322(82122673, +), CAediting_419323(82122722, +), CAediting_419324(82122780, +), CAediting_419325(82122791, +), CAediting_419326(82123136, +), CAediting_419327(82123137, +), CAediting_419328(82123138, +), CAediting_419329(82123141, +), CAediting_419330(82123184, +), CAediting_419331(82123246, +), CAediting_419332(82123265, +), CAediting_419333(82123268, +), CAediting_419334(82123269, +), CAediting_419335(82123270, +), CAediting_419336(82123333, +), CAediting_419337(82123334, +), CAediting_419338(82123337, +), CAediting_419339(82124879, +), CAediting_419340(82124889, +), CAediting_419341(82130989, +), CAediting_419342(82147272, +), CAediting_419343(82147286, +), CAediting_419344(82147350, +), CAediting_419345(82175408, +), CAediting_419346(82186710, +), CAediting_419347(82187046, +), CAediting_419348(82187212, +), CAediting_419349(82187214, +), CAediting_419350(82189647, +), CAediting_419351(82189741, +), CAediting_419352(82190517, +), CAediting_419353(82190518, +), CAediting_419354(82190595, +), CAediting_419355(82190606, +), CAediting_419356(82190609, +), CAediting_419357(82190650, +), CAediting_419358(82190656, +), CAediting_419359(82190664, +), CAediting_419360(82190677, +), CAediting_419361(82190692, +), CAediting_419362(82190706, +), CAediting_419363(82190719, +), CAediting_419364(82217830, +), CAediting_419365(82217843, +), CAediting_419366(82246434, +), CAediting_419367(82246455, +), CAediting_419368(82246504, +), CAediting_419369(82254270, +), CAediting_419370(82254279, +), CAediting_419371(82254293, +), CAediting_419372(82254295, +), CAediting_419373(82254301, +), CAediting_419374(82254302, +), CAediting_419375(82254323, +), CAediting_419376(82254334, +), CAediting_419377(82254337, +), CAediting_419378(82254350, +), CAediting_419379(82254356, +), CAediting_419380(82254358, +), CAediting_419381(82254371, +), CAediting_419382(82254379, +), CAediting_419383(82254438, +), CAediting_419384(82254444, +), CAediting_419385(82254452, +), CAediting_419386(82254455, +), CAediting_419387(82254479, +), CAediting_419388(82254480, +), CAediting_419389(82254484, +), CAediting_419390(82254491, +), CAediting_419391(82254493, +), CAediting_419392(82254504, +), CAediting_419393(82254509, +), CAediting_419394(82254524, +), CAediting_419395(82254547, +), CAediting_419396(82258670, +), CAediting_419397(82261791, +),

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RNA editing positional annotations for ATG10 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_419343	chr5_82147286_+	nonsynonymous SNV	ENST00000355178.7	c.A313G	p.S105G	D	B	D
CAediting_419343	chr5_82147286_+	nonsynonymous SNV	ENST00000513443.4	c.A313G	p.S105G	D	B	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_419281	chr5_81976208_+	UTR5
CAediting_419282	chr5_81976216_+	UTR5
CAediting_419283	chr5_81976221_+	UTR5
CAediting_419284	chr5_81976269_+	UTR5
CAediting_419285	chr5_81976270_+	UTR5
CAediting_419286	chr5_81976271_+	UTR5
CAediting_419287	chr5_81976283_+	UTR5
CAediting_419288	chr5_81977001_+	intronic
CAediting_419289	chr5_81978918_+	intronic
CAediting_419290	chr5_81986842_+	intronic
CAediting_419291	chr5_81986858_+	intronic
CAediting_419292	chr5_81991584_+	intronic
CAediting_419293	chr5_81992584_+	intronic
CAediting_419294	chr5_82021865_+	intronic
CAediting_419295	chr5_82022104_+	intronic
CAediting_419296	chr5_82022511_+	intronic
CAediting_419297	chr5_82022583_+	intronic
CAediting_419298	chr5_82022584_+	intronic
CAediting_419299	chr5_82022585_+	intronic
CAediting_419300	chr5_82035046_+	intronic
CAediting_419301	chr5_82036855_+	intronic
CAediting_419302	chr5_82036915_+	intronic
CAediting_419303	chr5_82037011_+	intronic
CAediting_419304	chr5_82037052_+	intronic
CAediting_419305	chr5_82037076_+	intronic
CAediting_419306	chr5_82057350_+	intronic
CAediting_419307	chr5_82057364_+	intronic
CAediting_419308	chr5_82057365_+	intronic
CAediting_419309	chr5_82062082_+	intronic
CAediting_419310	chr5_82063137_+	intronic
CAediting_419311	chr5_82063239_+	intronic
CAediting_419312	chr5_82063258_+	intronic
CAediting_419313	chr5_82063310_+	intronic
CAediting_419314	chr5_82122239_+	ncRNA_intronic
CAediting_419315	chr5_82122249_+	ncRNA_intronic
CAediting_419316	chr5_82122297_+	ncRNA_intronic
CAediting_419317	chr5_82122551_+	ncRNA_intronic
CAediting_419318	chr5_82122554_+	ncRNA_intronic
CAediting_419319	chr5_82122562_+	ncRNA_intronic
CAediting_419320	chr5_82122605_+	ncRNA_intronic
CAediting_419321	chr5_82122672_+	ncRNA_intronic
CAediting_419322	chr5_82122673_+	ncRNA_intronic
CAediting_419323	chr5_82122722_+	ncRNA_intronic
CAediting_419324	chr5_82122780_+	ncRNA_intronic
CAediting_419325	chr5_82122791_+	ncRNA_intronic
CAediting_419326	chr5_82123136_+	ncRNA_intronic
CAediting_419327	chr5_82123137_+	ncRNA_intronic
CAediting_419328	chr5_82123138_+	ncRNA_intronic
CAediting_419329	chr5_82123141_+	ncRNA_intronic
CAediting_419330	chr5_82123184_+	ncRNA_intronic
CAediting_419331	chr5_82123246_+	ncRNA_intronic
CAediting_419332	chr5_82123265_+	ncRNA_intronic
CAediting_419333	chr5_82123268_+	ncRNA_intronic
CAediting_419334	chr5_82123269_+	ncRNA_intronic
CAediting_419335	chr5_82123270_+	ncRNA_intronic
CAediting_419336	chr5_82123333_+	ncRNA_intronic
CAediting_419337	chr5_82123334_+	ncRNA_intronic
CAediting_419338	chr5_82123337_+	ncRNA_intronic
CAediting_419339	chr5_82124879_+	ncRNA_intronic
CAediting_419340	chr5_82124889_+	ncRNA_intronic
CAediting_419341	chr5_82130989_+	ncRNA_intronic
CAediting_419342	chr5_82147272_+	exonic
CAediting_419343	chr5_82147286_+	exonic
CAediting_419344	chr5_82147350_+	exonic
CAediting_419345	chr5_82175408_+	ncRNA_intronic
CAediting_419346	chr5_82186710_+	ncRNA_intronic
CAediting_419347	chr5_82187046_+	ncRNA_intronic
CAediting_419348	chr5_82187212_+	ncRNA_intronic
CAediting_419349	chr5_82187214_+	ncRNA_intronic
CAediting_419350	chr5_82189647_+	ncRNA_intronic
CAediting_419351	chr5_82189741_+	ncRNA_intronic
CAediting_419352	chr5_82190517_+	ncRNA_intronic
CAediting_419353	chr5_82190518_+	ncRNA_intronic
CAediting_419354	chr5_82190595_+	ncRNA_intronic
CAediting_419355	chr5_82190606_+	ncRNA_intronic
CAediting_419356	chr5_82190609_+	ncRNA_intronic
CAediting_419357	chr5_82190650_+	ncRNA_intronic
CAediting_419358	chr5_82190656_+	ncRNA_intronic
CAediting_419359	chr5_82190664_+	ncRNA_intronic
CAediting_419360	chr5_82190677_+	ncRNA_intronic
CAediting_419361	chr5_82190692_+	ncRNA_intronic
CAediting_419362	chr5_82190706_+	ncRNA_intronic
CAediting_419363	chr5_82190719_+	ncRNA_intronic
CAediting_419364	chr5_82217830_+	ncRNA_intronic
CAediting_419365	chr5_82217843_+	ncRNA_intronic
CAediting_419366	chr5_82246434_+	ncRNA_intronic
CAediting_419367	chr5_82246455_+	ncRNA_intronic
CAediting_419368	chr5_82246504_+	ncRNA_intronic
CAediting_419369	chr5_82254270_+	ncRNA_intronic
CAediting_419370	chr5_82254279_+	ncRNA_intronic
CAediting_419371	chr5_82254293_+	ncRNA_intronic
CAediting_419372	chr5_82254295_+	ncRNA_intronic
CAediting_419373	chr5_82254301_+	ncRNA_intronic
CAediting_419374	chr5_82254302_+	ncRNA_intronic
CAediting_419375	chr5_82254323_+	ncRNA_intronic
CAediting_419376	chr5_82254334_+	ncRNA_intronic
CAediting_419377	chr5_82254337_+	ncRNA_intronic
CAediting_419378	chr5_82254350_+	ncRNA_intronic
CAediting_419379	chr5_82254356_+	ncRNA_intronic
CAediting_419380	chr5_82254358_+	ncRNA_intronic
CAediting_419381	chr5_82254371_+	ncRNA_intronic
CAediting_419382	chr5_82254379_+	ncRNA_intronic
CAediting_419383	chr5_82254438_+	ncRNA_intronic
CAediting_419384	chr5_82254444_+	ncRNA_intronic
CAediting_419385	chr5_82254452_+	ncRNA_intronic
CAediting_419386	chr5_82254455_+	ncRNA_intronic
CAediting_419387	chr5_82254479_+	ncRNA_intronic
CAediting_419388	chr5_82254480_+	ncRNA_intronic
CAediting_419389	chr5_82254484_+	ncRNA_intronic
CAediting_419390	chr5_82254491_+	ncRNA_intronic
CAediting_419391	chr5_82254493_+	ncRNA_intronic
CAediting_419392	chr5_82254504_+	ncRNA_intronic
CAediting_419393	chr5_82254509_+	ncRNA_intronic
CAediting_419394	chr5_82254524_+	ncRNA_intronic
CAediting_419395	chr5_82254547_+	ncRNA_intronic
CAediting_419396	chr5_82258670_+	ncRNA_intronic
CAediting_419397	chr5_82261791_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_419281	chr5_81976208_+	SINE	Alu	AluYf1
CAediting_419282	chr5_81976216_+	SINE	Alu	AluYf1
CAediting_419283	chr5_81976221_+	SINE	Alu	AluYf1
CAediting_419284	chr5_81976269_+	SINE	Alu	AluYf1
CAediting_419285	chr5_81976270_+	SINE	Alu	AluYf1
CAediting_419286	chr5_81976271_+	SINE	Alu	AluYf1
CAediting_419287	chr5_81976283_+	SINE	Alu	AluYf1
CAediting_419288	chr5_81977001_+	SINE	Alu	AluJo
CAediting_419289	chr5_81978918_+	SINE	Alu	AluSx
CAediting_419290	chr5_81986842_+	SINE	Alu	AluSz
CAediting_419291	chr5_81986858_+	SINE	Alu	AluSz
CAediting_419292	chr5_81991584_+	SINE	Alu	AluSq2
CAediting_419293	chr5_81992584_+	SINE	Alu	AluSz
CAediting_419294	chr5_82021865_+	SINE	Alu	AluSc
CAediting_419295	chr5_82022104_+	SINE	Alu	AluSg
CAediting_419296	chr5_82022511_+	SINE	Alu	AluSx
CAediting_419297	chr5_82022583_+	SINE	Alu	AluSx
CAediting_419298	chr5_82022584_+	SINE	Alu	AluSx
CAediting_419299	chr5_82022585_+	SINE	Alu	AluSx
CAediting_419300	chr5_82035046_+	SINE	Alu	AluSx1
CAediting_419301	chr5_82036855_+	SINE	Alu	AluSc5
CAediting_419302	chr5_82036915_+	SINE	Alu	AluSc5
CAediting_419303	chr5_82037011_+	SINE	Alu	AluSc5
CAediting_419304	chr5_82037052_+	SINE	Alu	AluSc5
CAediting_419305	chr5_82037076_+	SINE	Alu	AluSc5
CAediting_419306	chr5_82057350_+	LTR	ERVL-MaLR	MLT1C
CAediting_419307	chr5_82057364_+	LTR	ERVL-MaLR	MLT1C
CAediting_419308	chr5_82057365_+	LTR	ERVL-MaLR	MLT1C
CAediting_419309	chr5_82062082_+	SINE	Alu	AluJr
CAediting_419310	chr5_82063137_+	SINE	Alu	AluJr4
CAediting_419311	chr5_82063239_+	SINE	Alu	AluJr4
CAediting_419312	chr5_82063258_+	SINE	Alu	AluJr4
CAediting_419313	chr5_82063310_+	SINE	Alu	AluJr4
CAediting_419314	chr5_82122239_+	LINE	L1	L1PREC2
CAediting_419315	chr5_82122249_+	LINE	L1	L1PREC2
CAediting_419316	chr5_82122297_+	LINE	L1	L1PREC2
CAediting_419317	chr5_82122551_+	LINE	L1	L1PREC2
CAediting_419318	chr5_82122554_+	LINE	L1	L1PREC2
CAediting_419319	chr5_82122562_+	LINE	L1	L1PREC2
CAediting_419320	chr5_82122605_+	LINE	L1	L1PREC2
CAediting_419321	chr5_82122672_+	LINE	L1	L1PREC2
CAediting_419322	chr5_82122673_+	LINE	L1	L1PREC2
CAediting_419323	chr5_82122722_+	LINE	L1	L1PREC2
CAediting_419324	chr5_82122780_+	LINE	L1	L1PREC2
CAediting_419325	chr5_82122791_+	LINE	L1	L1PREC2
CAediting_419326	chr5_82123136_+	LINE	L1	L1PREC2
CAediting_419327	chr5_82123137_+	LINE	L1	L1PREC2
CAediting_419328	chr5_82123138_+	LINE	L1	L1PREC2
CAediting_419329	chr5_82123141_+	LINE	L1	L1PREC2
CAediting_419330	chr5_82123184_+	LINE	L1	L1PREC2
CAediting_419331	chr5_82123246_+	LINE	L1	L1PREC2
CAediting_419332	chr5_82123265_+	LINE	L1	L1PREC2
CAediting_419333	chr5_82123268_+	LINE	L1	L1PREC2
CAediting_419334	chr5_82123269_+	LINE	L1	L1PREC2
CAediting_419335	chr5_82123270_+	LINE	L1	L1PREC2
CAediting_419336	chr5_82123333_+	LINE	L1	L1PREC2
CAediting_419337	chr5_82123334_+	LINE	L1	L1PREC2
CAediting_419338	chr5_82123337_+	LINE	L1	L1PREC2
CAediting_419339	chr5_82124879_+	LINE	L1	L1PA7
CAediting_419340	chr5_82124889_+	LINE	L1	L1PA7
CAediting_419341	chr5_82130989_+	LINE	L1	L1PA16
CAediting_419342	chr5_82147272_+	SINE	Alu	AluSz
CAediting_419343	chr5_82147286_+	SINE	Alu	AluSz
CAediting_419344	chr5_82147350_+	SINE	Alu	AluSz
CAediting_419345	chr5_82175408_+	SINE	Alu	AluJr
CAediting_419346	chr5_82186710_+	SINE	Alu	AluSz
CAediting_419347	chr5_82187046_+	SINE	Alu	FLAM_A
CAediting_419350	chr5_82189647_+	SINE	Alu	AluSz
CAediting_419351	chr5_82189741_+	SINE	Alu	AluSz
CAediting_419352	chr5_82190517_+	SINE	Alu	AluY
CAediting_419353	chr5_82190518_+	SINE	Alu	AluY
CAediting_419354	chr5_82190595_+	SINE	Alu	AluY
CAediting_419355	chr5_82190606_+	SINE	Alu	AluY
CAediting_419356	chr5_82190609_+	SINE	Alu	AluY
CAediting_419357	chr5_82190650_+	SINE	Alu	AluY
CAediting_419358	chr5_82190656_+	SINE	Alu	AluY
CAediting_419359	chr5_82190664_+	SINE	Alu	AluY
CAediting_419360	chr5_82190677_+	SINE	Alu	AluY
CAediting_419361	chr5_82190692_+	SINE	Alu	AluY
CAediting_419362	chr5_82190706_+	SINE	Alu	AluY
CAediting_419363	chr5_82190719_+	SINE	Alu	AluY
CAediting_419364	chr5_82217830_+	SINE	Alu	AluJo
CAediting_419365	chr5_82217843_+	SINE	Alu	AluJo
CAediting_419366	chr5_82246434_+	SINE	Alu	FLAM_C
CAediting_419367	chr5_82246455_+	SINE	Alu	FLAM_C
CAediting_419368	chr5_82246504_+	SINE	Alu	FLAM_C
CAediting_419370	chr5_82254279_+	SINE	Alu	AluJb
CAediting_419371	chr5_82254293_+	SINE	Alu	AluJb
CAediting_419372	chr5_82254295_+	SINE	Alu	AluJb
CAediting_419373	chr5_82254301_+	SINE	Alu	AluJb
CAediting_419374	chr5_82254302_+	SINE	Alu	AluJb
CAediting_419375	chr5_82254323_+	SINE	Alu	AluJb
CAediting_419376	chr5_82254334_+	SINE	Alu	AluJb
CAediting_419377	chr5_82254337_+	SINE	Alu	AluJb
CAediting_419378	chr5_82254350_+	SINE	Alu	AluJb
CAediting_419379	chr5_82254356_+	SINE	Alu	AluJb
CAediting_419380	chr5_82254358_+	SINE	Alu	AluJb
CAediting_419381	chr5_82254371_+	SINE	Alu	AluJb
CAediting_419382	chr5_82254379_+	SINE	Alu	AluJb
CAediting_419383	chr5_82254438_+	SINE	Alu	AluJb
CAediting_419384	chr5_82254444_+	SINE	Alu	AluJb
CAediting_419385	chr5_82254452_+	SINE	Alu	AluJb
CAediting_419386	chr5_82254455_+	SINE	Alu	AluJb
CAediting_419387	chr5_82254479_+	SINE	Alu	AluJb
CAediting_419388	chr5_82254480_+	SINE	Alu	AluJb
CAediting_419389	chr5_82254484_+	SINE	Alu	AluJb
CAediting_419390	chr5_82254491_+	SINE	Alu	AluJb
CAediting_419391	chr5_82254493_+	SINE	Alu	AluJb
CAediting_419392	chr5_82254504_+	SINE	Alu	AluJb
CAediting_419393	chr5_82254509_+	SINE	Alu	AluJb
CAediting_419394	chr5_82254524_+	SINE	Alu	AluJb
CAediting_419395	chr5_82254547_+	SINE	Alu	AluJb
CAediting_419396	chr5_82258670_+	SINE	Alu	AluJo
CAediting_419397	chr5_82261791_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for ATG10

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_419375	chr5_82254323_+	82254323:82254331	5SS	3+0i	AAGGTGGGA	6.03	GAGGTGGGA	4.3

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000152348.14.ATG10.

Correlation between RNA A-to-I editing and PSI for ENSG00000152348.14.ATG10.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ATG10

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ATG10

- Lollipop plot for RNA A-to-I editings across protein structure.
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The effects of the RNA editing to the miRNA binding sites for ATG10

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_419371	chr5_82254293_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4466	82254291	82254296	6mer	82254280	82254297	143.00	-28.59
CAediting_419373	chr5_82254301_+	ENSG00000152348.14	ENST00000458350	hsa-miR-513a-5p	82254295	82254301	7mer-m8	82254285	82254302	144.00	-17.77
CAediting_419373	chr5_82254301_+	ENSG00000152348.14	ENST00000458350	hsa-miR-513a-5p	82254295	82254301	7mer-m8	82254285	82254302	144.00	-17.77
CAediting_419374	chr5_82254302_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4529-3p	82254300	82254306	7mer-m8	82254287	82254307	155.00	-17.86
CAediting_419378	chr5_82254350_+	ENSG00000152348.14	ENST00000458350	hsa-miR-361-3p	82254344	82254350	7mer-m8	82254325	82254351	156.00	-26.87
CAediting_419383	chr5_82254438_+	ENSG00000152348.14	ENST00000458350	hsa-miR-140-3p	82254433	82254439	7mer-m8	82254420	82254440	163.00	-25.87
CAediting_419379	chr5_82254356_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4281	82254353	82254360	8mer-1a	82254343	82254360	142.00	-19.87
CAediting_419379	chr5_82254356_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6716-3p	82254349	82254355	7mer-m8	82254335	82254356	151.00	-20.37
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3176	82254355	82254361	7mer-m8	82254344	82254362	165.00	-28.35
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3922-3p	82254355	82254361	7mer-m8	82254341	82254362	154.00	-23.60
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6878-3p	82254354	82254360	7mer-m8	82254341	82254361	144.00	-27.84
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-331-3p	82254449	82254455	7mer-m8	82254436	82254456	145.00	-19.28
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3943	82254452	82254458	7mer-m8	82254437	82254459	147.00	-23.07
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4292	82254448	82254454	7mer-m8	82254438	82254455	140.00	-23.56
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4313	82254451	82254457	7mer-m8	82254439	82254458	150.00	-23.55
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6791-5p	82254448	82254454	7mer-m8	82254432	82254455	157.00	-37.11
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-125b-1-3p	82254477	82254483	7mer-m8	82254463	82254484	145.00	-16.21
CAediting_419390	chr5_82254491_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1281	82254484	82254490	7mer-m8	82254475	82254491	145.00	-17.85
CAediting_419391	chr5_82254493_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6747-3p	82254486	82254492	7mer-m8	82254473	82254493	146.00	-20.75
CAediting_419391	chr5_82254493_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6752-3p	82254487	82254493	7mer-m8	82254474	82254494	147.00	-20.23
CAediting_419391	chr5_82254493_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6801-3p	82254488	82254494	7mer-m8	82254479	82254495	153.00	-27.09
CAediting_419391	chr5_82254493_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6810-3p	82254488	82254494	7mer-m8	82254473	82254495	157.00	-22.82
CAediting_419392	chr5_82254504_+	ENSG00000152348.14	ENST00000458350	hsa-miR-324-3p	82254497	82254503	7mer-m8	82254482	82254504	149.00	-24.91
CAediting_419392	chr5_82254504_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4690-3p	82254501	82254508	8mer-1a	82254489	82254508	165.00	-31.39
CAediting_419392	chr5_82254504_+	ENSG00000152348.14	ENST00000458350	hsa-miR-5685	82254501	82254508	8mer-1a	82254488	82254508	149.00	-19.15
CAediting_419393	chr5_82254509_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4267	82254502	82254508	7mer-m8	82254494	82254509	148.00	-20.54
CAediting_419393	chr5_82254509_+	ENSG00000152348.14	ENST00000458350	hsa-miR-5588-3p	82254506	82254512	7mer-m8	82254493	82254513	151.00	-18.92
CAediting_419393	chr5_82254509_+	ENSG00000152348.14	ENST00000458350	hsa-miR-7977	82254504	82254510	7mer-m8	82254493	82254511	150.00	-20.37
CAediting_419395	chr5_82254547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4669	82254545	82254551	7mer-m8	82254531	82254552	145.00	-18.60
CAediting_419369	chr5_82254270_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4757-3p	82254267	82254273	7mer-m8	82254253	82254274	140.00	-16.97
CAediting_419382	chr5_82254379_+	ENSG00000152348.14	ENST00000458350	hsa-miR-23a-5p	82254377	82254383	7mer-m8	82254363	82254384	140.00	-15.37
CAediting_419382	chr5_82254379_+	ENSG00000152348.14	ENST00000458350	hsa-miR-23b-5p	82254377	82254383	7mer-m8	82254364	82254384	156.00	-21.12
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6777-5p	82254445	82254451	7mer-m8	82254431	82254452	148.00	-22.84

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_419373	chr5_82254301_+	ENSG00000152348.14	ENST00000458350	hsa-miR-10399-5p	82254296	82254302	7mer-m8	82254282	82254303	148	-10
CAediting_419374	chr5_82254302_+	ENSG00000152348.14	ENST00000458350	hsa-miR-10399-5p	82254296	82254302	7mer-m8	82254282	82254303	148	-10
CAediting_419395	chr5_82254547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1231	82254544	82254550	7mer-m8	82254531	82254551	145	-20.59
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1269a	82254522	82254528	7mer-m8	82254510	82254529	152	-22.67
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1269b	82254522	82254528	7mer-m8	82254510	82254529	144	-19.51
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1288-3p	82254521	82254528	8mer-1a	82254508	82254528	146	-16.91
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1343-3p	82254448	82254454	7mer-m8	82254432	82254455	148	-24.49
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1343-3p	82254448	82254454	7mer-m8	82254432	82254455	148	-24.49
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-1343-3p	82254480	82254486	7mer-m8	82254462	82254487	145	-32
CAediting_419395	chr5_82254547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-149-5p	82254541	82254548	8mer-1a	82254528	82254548	150	-21.98
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-17-3p	82254518	82254524	7mer-m8	82254507	82254525	148	-21
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3150a-3p	82254445	82254451	7mer-m8	82254431	82254452	142	-22.15
CAediting_419369	chr5_82254270_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3171	82254265	82254272	8mer-1a	82254249	82254272	140	-8.48
CAediting_419370	chr5_82254279_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3187-3p	82254272	82254278	7mer-m8	82254260	82254279	148	-19.38
CAediting_419370	chr5_82254279_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3190-5p	82254273	82254279	7mer-m8	82254260	82254280	153	-22.95
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3663-5p	82254355	82254361	7mer-m8	82254343	82254362	144	-24.8
CAediting_419372	chr5_82254295_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3934-5p	82254292	82254298	7mer-m8	82254277	82254299	151	-21
CAediting_419387	chr5_82254479_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3940-5p	82254478	82254483	6mer	82254465	82254484	141	-22.43
CAediting_419388	chr5_82254480_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3940-5p	82254478	82254483	6mer	82254465	82254484	141	-22.43
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-3940-5p	82254478	82254483	6mer	82254465	82254484	141	-22.43
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4418	82254519	82254525	7mer-m8	82254508	82254526	150	-15.75
CAediting_419384	chr5_82254444_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4487	82254441	82254447	7mer-m8	82254428	82254448	151	-19.73
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4667-5p	82254446	82254452	7mer-m8	82254434	82254453	154	-23
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4700-5p	82254446	82254452	7mer-m8	82254431	82254453	148	-23.26
CAediting_419381	chr5_82254371_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4716-5p	82254369	82254375	7mer-m8	82254355	82254376	148	-14.09
CAediting_419384	chr5_82254444_+	ENSG00000152348.14	ENST00000458350	hsa-miR-4731-5p	82254440	82254445	6mer	82254426	82254446	142	-18.07
CAediting_419390	chr5_82254491_+	ENSG00000152348.14	ENST00000458350	hsa-miR-5001-3p	82254486	82254492	7mer-m8	82254469	82254493	150	-20.73
CAediting_419391	chr5_82254493_+	ENSG00000152348.14	ENST00000458350	hsa-miR-5001-3p	82254486	82254492	7mer-m8	82254469	82254493	150	-20.73
CAediting_419374	chr5_82254302_+	ENSG00000152348.14	ENST00000458350	hsa-miR-5004-3p	82254300	82254306	7mer-m8	82254283	82254307	143	-20.86
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-509-3-5p	82254519	82254525	7mer-m8	82254506	82254526	149	-17.78
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-509-5p	82254519	82254525	7mer-m8	82254502	82254526	148	-17.58
CAediting_419394	chr5_82254524_+	ENSG00000152348.14	ENST00000458350	hsa-miR-509-5p	82254519	82254525	7mer-m8	82254502	82254526	148	-17.58
CAediting_419372	chr5_82254295_+	ENSG00000152348.14	ENST00000458350	hsa-miR-552-3p	82254293	82254300	8mer-1a	82254280	82254300	140	-14.36
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6131	82254356	82254362	7mer-m8	82254345	82254363	140	-18.33
CAediting_419381	chr5_82254371_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6501-5p	82254366	82254372	7mer-1a	82254351	82254372	140	-25.18
CAediting_419373	chr5_82254301_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6504-3p	82254296	82254302	7mer-m8	82254282	82254303	145	-14.48
CAediting_419374	chr5_82254302_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6504-3p	82254296	82254302	7mer-m8	82254282	82254303	145	-14.48
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-660-3p	82254450	82254456	7mer-m8	82254436	82254457	150	-22.31
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-660-3p	82254450	82254456	7mer-m8	82254436	82254457	150	-22.31
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-660-3p	82254482	82254488	7mer-m8	82254469	82254489	148	-15.88
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6742-3p	82254479	82254486	8mer-1a	82254463	82254486	148	-25.09
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6763-5p	82254445	82254451	7mer-m8	82254437	82254452	149	-28.34
CAediting_419376	chr5_82254334_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6772-3p	82254328	82254333	6mer	82254311	82254334	140	-22.73
CAediting_419385	chr5_82254452_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6783-3p	82254448	82254454	7mer-m8	82254434	82254455	141	-18.22
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6783-3p	82254448	82254454	7mer-m8	82254434	82254455	141	-18.22
CAediting_419389	chr5_82254484_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6783-3p	82254480	82254486	7mer-m8	82254466	82254487	142	-19.63
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6791-3p	82254451	82254457	7mer-m8	82254438	82254458	150	-18.15
CAediting_419371	chr5_82254293_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6807-5p	82254286	82254292	7mer-m8	82254271	82254293	144	-20.35
CAediting_419386	chr5_82254455_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6829-3p	82254451	82254457	7mer-m8	82254439	82254458	147	-15.68
CAediting_419390	chr5_82254491_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6836-3p	82254484	82254490	7mer-m8	82254471	82254491	140	-15.97
CAediting_419379	chr5_82254356_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6843-3p	82254354	82254360	7mer-m8	82254341	82254361	154	-19
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6843-3p	82254354	82254360	7mer-m8	82254341	82254361	154	-19
CAediting_419379	chr5_82254356_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6848-3p	82254354	82254360	7mer-m8	82254344	82254361	147	-21.29
CAediting_419380	chr5_82254358_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6848-3p	82254354	82254360	7mer-m8	82254344	82254361	147	-21.29
CAediting_419375	chr5_82254323_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6878-3p	82254316	82254323	8mer-1a	82254303	82254323	142	-13.53
CAediting_419381	chr5_82254371_+	ENSG00000152348.14	ENST00000458350	hsa-miR-744-3p	82254366	82254372	7mer-m8	82254348	82254373	145	-14.76
CAediting_419383	chr5_82254438_+	ENSG00000152348.14	ENST00000458350	hsa-miR-8052	82254437	82254443	7mer-1a	82254423	82254443	145	-23.12
CAediting_419395	chr5_82254547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-8057	82254540	82254546	7mer-m8	82254526	82254547	151	-20.24

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000152348.14	ENST00000355178	hsa-miR-605-3p	82147826	82147832	7mer-m8	82147810	82147833	142	-14.75
CAediting_980496	chr14_31014685_-	ENSG00000152348.14	ENST00000458350	hsa-miR-624-3p	82254380	82254386	7mer-m8	82254367	82254387	152	-13.11
CAediting_1229414	chr17_67471546_+	ENSG00000152348.14	ENST00000355178	hsa-miR-548aa	82147382	82147388	7mer-m8	82147365	82147389	144	-12.97
CAediting_1368054	chr19_46709310_-	ENSG00000152348.14	ENST00000355178	hsa-miR-320e	82147600	82147605	6mer	82147589	82147606	150	-24.37
CAediting_442554	chr5_154685830_+	ENSG00000152348.14	ENST00000355178	hsa-miR-1303	82147947	82147954	8mer-1a	82147933	82147954	140	-12.14
CAediting_1229415	chr17_67471547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-548aa	82254471	82254478	8mer-1a	82254452	82254478	152	-19.16
CAediting_1229415	chr17_67471547_+	ENSG00000152348.14	ENST00000458350	hsa-miR-548aa	82254129	82254136	8mer-1a	82254112	82254136	140	-9.85
CAediting_1368054	chr19_46709310_-	ENSG00000152348.14	ENST00000458350	hsa-miR-320e	82254441	82254447	7mer-m8	82254431	82254448	147	-21.75
CAediting_604450	chr7_133034877_-	ENSG00000152348.14	ENST00000458350	hsa-miR-3654	82254524	82254530	7mer-m8	82254514	82254531	147	-21.3
CAediting_1229414	chr17_67471546_+	ENSG00000152348.14	ENST00000513443	hsa-miR-548aa	82147382	82147388	7mer-m8	82147365	82147389	144	-12.97
CAediting_1524209	chrX_134546392_-	ENSG00000152348.14	ENST00000355178	hsa-miR-503-5p	82147820	82147825	6mer	82147806	82147826	146	-21.8

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000152348.14	ENST00000355178	hsa-miR-548aa	82147761	82147767	7mer-m8	82147744	82147768	148	-7.46
CAediting_580943	chr7_100356700_+	ENSG00000152348.14	ENST00000458350	hsa-miR-6840-3p	82254342	82254349	8mer-1a	82254328	82254349	147	-19.08

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ATG10

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000282185.6	protein_coding
ENST00000355178.7	protein_coding
ENST00000458350.6	protein_coding
ENST00000513443.4	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_419369	ENST00000282185.6	chr5_82254270_+	-912.70	-914.90	-934.50
CAediting_419370	ENST00000282185.6	chr5_82254279_+	-914.20	-914.90	-934.50
CAediting_419371	ENST00000282185.6	chr5_82254293_+	-917.60	-914.90	-934.50
CAediting_419372	ENST00000282185.6	chr5_82254295_+	-916.00	-914.90	-934.50
CAediting_419373	ENST00000282185.6	chr5_82254301_+	-917.50	-914.90	-934.50
CAediting_419374	ENST00000282185.6	chr5_82254302_+	-915.70	-914.90	-934.50
CAediting_419375	ENST00000282185.6	chr5_82254323_+	-914.90	-914.90	-934.50
CAediting_419376	ENST00000282185.6	chr5_82254334_+	-915.10	-914.90	-934.50
CAediting_419377	ENST00000282185.6	chr5_82254337_+	-915.10	-914.90	-934.50
CAediting_419378	ENST00000282185.6	chr5_82254350_+	-918.00	-914.90	-934.50
CAediting_419379	ENST00000282185.6	chr5_82254356_+	-916.90	-914.90	-934.50
CAediting_419380	ENST00000282185.6	chr5_82254358_+	-915.30	-914.90	-934.50
CAediting_419381	ENST00000282185.6	chr5_82254371_+	-914.90	-914.90	-934.50
CAediting_419382	ENST00000282185.6	chr5_82254379_+	-915.90	-914.90	-934.50
CAediting_419383	ENST00000282185.6	chr5_82254438_+	-915.90	-914.90	-934.50
CAediting_419384	ENST00000282185.6	chr5_82254444_+	-914.40	-914.90	-934.50
CAediting_419385	ENST00000282185.6	chr5_82254452_+	-915.70	-914.90	-934.50
CAediting_419386	ENST00000282185.6	chr5_82254455_+	-917.40	-914.90	-934.50
CAediting_419387	ENST00000282185.6	chr5_82254479_+	-917.40	-914.90	-934.50
CAediting_419388	ENST00000282185.6	chr5_82254480_+	-915.20	-914.90	-934.50
CAediting_419389	ENST00000282185.6	chr5_82254484_+	-914.80	-914.90	-934.50
CAediting_419390	ENST00000282185.6	chr5_82254491_+	-917.00	-914.90	-934.50
CAediting_419391	ENST00000282185.6	chr5_82254493_+	-917.90	-914.90	-934.50
CAediting_419392	ENST00000282185.6	chr5_82254504_+	-915.90	-914.90	-934.50
CAediting_419393	ENST00000282185.6	chr5_82254509_+	-914.90	-914.90	-934.50
CAediting_419394	ENST00000282185.6	chr5_82254524_+	-914.10	-914.90	-934.50
CAediting_419395	ENST00000282185.6	chr5_82254547_+	-916.70	-914.90	-934.50
CAediting_419342	ENST00000355178.7	chr5_82147272_+	-483.50	-484.20	-488.60
CAediting_419343	ENST00000355178.7	chr5_82147286_+	-486.80	-484.20	-488.60
CAediting_419344	ENST00000355178.7	chr5_82147350_+	-486.70	-484.20	-488.60
CAediting_419281	ENST00000458350.6	chr5_81976208_+	-672.20	-672.60	-702.60
CAediting_419282	ENST00000458350.6	chr5_81976216_+	-676.00	-672.60	-702.60
CAediting_419283	ENST00000458350.6	chr5_81976221_+	-677.70	-672.60	-702.60
CAediting_419284	ENST00000458350.6	chr5_81976269_+	-672.30	-672.60	-702.60
CAediting_419285	ENST00000458350.6	chr5_81976270_+	-672.70	-672.60	-702.60
CAediting_419286	ENST00000458350.6	chr5_81976271_+	-672.30	-672.60	-702.60
CAediting_419287	ENST00000458350.6	chr5_81976283_+	-672.60	-672.60	-702.60
CAediting_419369	ENST00000458350.6	chr5_82254270_+	-671.20	-672.60	-702.60
CAediting_419370	ENST00000458350.6	chr5_82254279_+	-678.80	-672.60	-702.60
CAediting_419371	ENST00000458350.6	chr5_82254293_+	-672.20	-672.60	-702.60
CAediting_419372	ENST00000458350.6	chr5_82254295_+	-678.00	-672.60	-702.60
CAediting_419373	ENST00000458350.6	chr5_82254301_+	-672.70	-672.60	-702.60
CAediting_419374	ENST00000458350.6	chr5_82254302_+	-672.60	-672.60	-702.60
CAediting_419375	ENST00000458350.6	chr5_82254323_+	-678.60	-672.60	-702.60
CAediting_419376	ENST00000458350.6	chr5_82254334_+	-672.90	-672.60	-702.60
CAediting_419377	ENST00000458350.6	chr5_82254337_+	-672.20	-672.60	-702.60
CAediting_419378	ENST00000458350.6	chr5_82254350_+	-671.70	-672.60	-702.60
CAediting_419379	ENST00000458350.6	chr5_82254356_+	-671.70	-672.60	-702.60
CAediting_419380	ENST00000458350.6	chr5_82254358_+	-672.00	-672.60	-702.60
CAediting_419381	ENST00000458350.6	chr5_82254371_+	-672.60	-672.60	-702.60
CAediting_419382	ENST00000458350.6	chr5_82254379_+	-672.10	-672.60	-702.60
CAediting_419383	ENST00000458350.6	chr5_82254438_+	-673.60	-672.60	-702.60
CAediting_419384	ENST00000458350.6	chr5_82254444_+	-672.10	-672.60	-702.60
CAediting_419385	ENST00000458350.6	chr5_82254452_+	-673.40	-672.60	-702.60
CAediting_419386	ENST00000458350.6	chr5_82254455_+	-675.10	-672.60	-702.60
CAediting_419387	ENST00000458350.6	chr5_82254479_+	-675.10	-672.60	-702.60
CAediting_419388	ENST00000458350.6	chr5_82254480_+	-672.90	-672.60	-702.60
CAediting_419389	ENST00000458350.6	chr5_82254484_+	-672.50	-672.60	-702.60
CAediting_419390	ENST00000458350.6	chr5_82254491_+	-674.70	-672.60	-702.60
CAediting_419391	ENST00000458350.6	chr5_82254493_+	-675.60	-672.60	-702.60
CAediting_419392	ENST00000458350.6	chr5_82254504_+	-673.60	-672.60	-702.60
CAediting_419393	ENST00000458350.6	chr5_82254509_+	-672.60	-672.60	-702.60
CAediting_419394	ENST00000458350.6	chr5_82254524_+	-671.80	-672.60	-702.60
CAediting_419395	ENST00000458350.6	chr5_82254547_+	-674.40	-672.60	-702.60
CAediting_419342	ENST00000513443.4	chr5_82147272_+	-394.10	-394.80	-400.60
CAediting_419343	ENST00000513443.4	chr5_82147286_+	-396.30	-394.80	-400.60
CAediting_419344	ENST00000513443.4	chr5_82147350_+	-397.30	-394.80	-400.60

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Relation with ADAR for ATG10

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
THCA	CAediting_419383	chr5_82254438_+	0.00229012300151939	0.389567919138452	.	.	.	.

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Relation with cancer stages for ATG10

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ATG10

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ATG10

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ATG10

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ATG10	C0006142	Malignant neoplasm of breast	1	CTD_human
ATG10	C0678222	Breast Carcinoma	1	CTD_human
ATG10	C1257931	Mammary Neoplasms, Human	1	CTD_human
ATG10	C1458155	Mammary Neoplasms	1	CTD_human
ATG10	C4704874	Mammary Carcinoma, Human	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene