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Editing gene: CAPZB (CAeditome ID:832)

Gene summary for CAPZB

Gene summary

Gene information	Gene symbol	CAPZB
	Gene ID	832
	Gene name	capping actin protein of muscle Z-line subunit beta
	Synonyms	CAPB\|CAPPB\|CAPZ
	Cytomap	1p36.13
	Type of gene	protein-coding
	Description	F-actin-capping protein subunit betacapZ betacapping actin protein of muscle Z-line beta subunitcapping protein (actin filament) muscle Z-line, betaepididymis secretory sperm binding protein
	Modification date	20210518
	UniProtAcc	P47756
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CAPZB	GO:0003779	F-actin-capping protein subunit beta	28493397
CAPZB	GO:0071203	F-actin-capping protein subunit beta	19922875

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RNA A-to-I events for CAPZB

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000077549.16

RNA A-to-I editing events in Cancer.

CAediting_19969(19340610, -), CAediting_19970(19342017, -), CAediting_19971(19346891, -), CAediting_19972(19346892, -), CAediting_19973(19346916, -), CAediting_19974(19346926, -), CAediting_19975(19346935, -), CAediting_19976(19346952, -), CAediting_19977(19346961, -), CAediting_19978(19346962, -), CAediting_19979(19347036, -), CAediting_19980(19347044, -), CAediting_19981(19347045, -), CAediting_19982(19347059, -), CAediting_19983(19347060, -), CAediting_19984(19347066, -), CAediting_19985(19347087, -), CAediting_19986(19347120, -), CAediting_19987(19347136, -), CAediting_19988(19350753, -), CAediting_19989(19350776, -), CAediting_19990(19350813, -), CAediting_19991(19350814, -), CAediting_19992(19350836, -), CAediting_19993(19350844, -), CAediting_19994(19350850, -), CAediting_19995(19350911, -), CAediting_19996(19351107, -), CAediting_19997(19351161, -), CAediting_19998(19351162, -), CAediting_19999(19355249, -), CAediting_20000(19355314, -), CAediting_20001(19357132, -), CAediting_20002(19362333, -), CAediting_20003(19362339, -), CAediting_20004(19362351, -), CAediting_20005(19362357, -), CAediting_20006(19362486, -), CAediting_20007(19362580, -), CAediting_20008(19362596, -), CAediting_20009(19363112, -), CAediting_20010(19363115, -), CAediting_20011(19363136, -), CAediting_20012(19363142, -), CAediting_20013(19363170, -), CAediting_20014(19363174, -), CAediting_20015(19363178, -), CAediting_20016(19363184, -), CAediting_20017(19364879, -), CAediting_20018(19364893, -), CAediting_20019(19364915, -), CAediting_20020(19364923, -), CAediting_20021(19364939, -), CAediting_20022(19364944, -), CAediting_20023(19364949, -), CAediting_20024(19364962, -), CAediting_20025(19364968, -), CAediting_20026(19364971, -), CAediting_20027(19364975, -), CAediting_20028(19364979, -), CAediting_20029(19364985, -), CAediting_20030(19364991, -), CAediting_20031(19365014, -), CAediting_20032(19365015, -), CAediting_20033(19365021, -), CAediting_20034(19365024, -), CAediting_20035(19365026, -), CAediting_20036(19365029, -), CAediting_20037(19365046, -), CAediting_20038(19365062, -), CAediting_20039(19365063, -), CAediting_20040(19365111, -), CAediting_20041(19365116, -), CAediting_20042(19365117, -), CAediting_20043(19365119, -), CAediting_20044(19365586, -), CAediting_20045(19365614, -), CAediting_20046(19365734, -), CAediting_20047(19365751, -), CAediting_20048(19365771, -), CAediting_20049(19366280, -), CAediting_20050(19366560, -), CAediting_20051(19366563, -), CAediting_20052(19366566, -), CAediting_20053(19366588, -), CAediting_20054(19366606, -), CAediting_20055(19379161, -), CAediting_20056(19379166, -), CAediting_20057(19379167, -), CAediting_20058(19379223, -), CAediting_20059(19379278, -), CAediting_20060(19379292, -), CAediting_20061(19379345, -), CAediting_20062(19381086, -), CAediting_20063(19381632, -), CAediting_20064(19381730, -), CAediting_20065(19381739, -), CAediting_20066(19381785, -), CAediting_20067(19381790, -), CAediting_20068(19381805, -), CAediting_20069(19383384, -), CAediting_20070(19392696, -), CAediting_20071(19394141, -), CAediting_20072(19394281, -), CAediting_20073(19394597, -), CAediting_20074(19394710, -), CAediting_20075(19394714, -), CAediting_20076(19406875, -), CAediting_20077(19411159, -), CAediting_20078(19411171, -), CAediting_20079(19413388, -), CAediting_20080(19413454, -), CAediting_20081(19413533, -), CAediting_20082(19416743, -), CAediting_20083(19416744, -), CAediting_20084(19422547, -), CAediting_20085(19422674, -), CAediting_20086(19422725, -), CAediting_20087(19423617, -), CAediting_20088(19423622, -), CAediting_20089(19423628, -), CAediting_20090(19423662, -), CAediting_20091(19423685, -), CAediting_20092(19423688, -), CAediting_20093(19423689, -), CAediting_20094(19423693, -), CAediting_20095(19423722, -), CAediting_20096(19423766, -), CAediting_20097(19423785, -), CAediting_20098(19423816, -), CAediting_20099(19423837, -), CAediting_20100(19423844, -), CAediting_20101(19423855, -), CAediting_20102(19424058, -), CAediting_20103(19424084, -), CAediting_20104(19431613, -), CAediting_20105(19443157, -), CAediting_20106(19443394, -), CAediting_20107(19444780, -), CAediting_20108(19445015, -), CAediting_20109(19447341, -), CAediting_20110(19447357, -), CAediting_20111(19447358, -), CAediting_20112(19447384, -), CAediting_20113(19447448, -), CAediting_20114(19447467, -), CAediting_20115(19447485, -), CAediting_20116(19447494, -), CAediting_20117(19447507, -), CAediting_20118(19447508, -), CAediting_20119(19447510, -), CAediting_20120(19447524, -), CAediting_20121(19447530, -), CAediting_20122(19449536, -), CAediting_20123(19449543, -), CAediting_20124(19449545, -), CAediting_20125(19449553, -), CAediting_20126(19449570, -), CAediting_20127(19449571, -), CAediting_20128(19449583, -), CAediting_20129(19449596, -), CAediting_20130(19449600, -), CAediting_20131(19449616, -), CAediting_20132(19449622, -), CAediting_20133(19449625, -), CAediting_20134(19449640, -), CAediting_20135(19449673, -), CAediting_20136(19449676, -), CAediting_20137(19449677, -), CAediting_20138(19449701, -), CAediting_20139(19452896, -), CAediting_20140(19452901, -), CAediting_20141(19452915, -), CAediting_20142(19452941, -), CAediting_20143(19452942, -), CAediting_20144(19452982, -), CAediting_20145(19452987, -), CAediting_20146(19452993, -), CAediting_20147(19453399, -), CAediting_20148(19456070, -), CAediting_20149(19456072, -), CAediting_20150(19460362, -), CAediting_20151(19460480, -), CAediting_20152(19460481, -), CAediting_20153(19460503, -), CAediting_20154(19460542, -), CAediting_20155(19460547, -), CAediting_20156(19460663, -), CAediting_20157(19462227, -), CAediting_20158(19462263, -), CAediting_20159(19462725, -), CAediting_20160(19463914, -), CAediting_20161(19463915, -), CAediting_20162(19463917, -), CAediting_20163(19463950, -), CAediting_20164(19463975, -), CAediting_20165(19463977, -), CAediting_20166(19463995, -), CAediting_20167(19464009, -), CAediting_20168(19464063, -), CAediting_20169(19464065, -), CAediting_20170(19464070, -), CAediting_20171(19464075, -), CAediting_20172(19464105, -), CAediting_20173(19464111, -), CAediting_20174(19464143, -), CAediting_20175(19464352, -), CAediting_20176(19464359, -), CAediting_20177(19464420, -), CAediting_20178(19464424, -), CAediting_20179(19464430, -), CAediting_20180(19464456, -), CAediting_20181(19464497, -), CAediting_20182(19464559, -), CAediting_20183(19464564, -), CAediting_20184(19464565, -), CAediting_20185(19464571, -), CAediting_20186(19467028, -), CAediting_20187(19467110, -), CAediting_20188(19467155, -), CAediting_20189(19470167, -), CAediting_20190(19471608, -), CAediting_20191(19471745, -), CAediting_20192(19471755, -), CAediting_20193(19472807, -), CAediting_20194(19472842, -), CAediting_20195(19472846, -), CAediting_20196(19472850, -), CAediting_20197(19472856, -), CAediting_20198(19472871, -), CAediting_20199(19472882, -), CAediting_20200(19472895, -), CAediting_20201(19472922, -), CAediting_20202(19472989, -), CAediting_20203(19472990, -), CAediting_20204(19472996, -), CAediting_20205(19473008, -), CAediting_20206(19473781, -), CAediting_20207(19473782, -), CAediting_20208(19473807, -), CAediting_20209(19473812, -), CAediting_20210(19473826, -), CAediting_20211(19473864, -), CAediting_20212(19474058, -), CAediting_20213(19474068, -), CAediting_20214(19474081, -), CAediting_20215(19474093, -), CAediting_20216(19474134, -), CAediting_20217(19474140, -), CAediting_20218(19474173, -), CAediting_20219(19474175, -), CAediting_20220(19474178, -), CAediting_20221(19474189, -), CAediting_20222(19474197, -), CAediting_20223(19474200, -), CAediting_20224(19474259, -), CAediting_20225(19474268, -), CAediting_20226(19474281, -), CAediting_20227(19476078, -), CAediting_20228(19476119, -), CAediting_20229(19476120, -), CAediting_20230(19476144, -), CAediting_20231(19476152, -), CAediting_20232(19476158, -), CAediting_20233(19476348, -), CAediting_20234(19476409, -), CAediting_20235(19476413, -), CAediting_20236(19477848, -), CAediting_20237(19479174, -),

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RNA editing positional annotations for CAPZB using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_19969	chr1_19340610_-	intronic
CAediting_19970	chr1_19342017_-	intronic
CAediting_19971	chr1_19346891_-	intronic
CAediting_19972	chr1_19346892_-	intronic
CAediting_19973	chr1_19346916_-	intronic
CAediting_19974	chr1_19346926_-	intronic
CAediting_19975	chr1_19346935_-	intronic
CAediting_19976	chr1_19346952_-	intronic
CAediting_19977	chr1_19346961_-	intronic
CAediting_19978	chr1_19346962_-	intronic
CAediting_19979	chr1_19347036_-	intronic
CAediting_19980	chr1_19347044_-	intronic
CAediting_19981	chr1_19347045_-	intronic
CAediting_19982	chr1_19347059_-	intronic
CAediting_19983	chr1_19347060_-	intronic
CAediting_19984	chr1_19347066_-	intronic
CAediting_19985	chr1_19347087_-	intronic
CAediting_19986	chr1_19347120_-	intronic
CAediting_19987	chr1_19347136_-	intronic
CAediting_19988	chr1_19350753_-	intronic
CAediting_19989	chr1_19350776_-	intronic
CAediting_19990	chr1_19350813_-	intronic
CAediting_19991	chr1_19350814_-	intronic
CAediting_19992	chr1_19350836_-	intronic
CAediting_19993	chr1_19350844_-	intronic
CAediting_19994	chr1_19350850_-	intronic
CAediting_19995	chr1_19350911_-	intronic
CAediting_19996	chr1_19351107_-	intronic
CAediting_19997	chr1_19351161_-	intronic
CAediting_19998	chr1_19351162_-	intronic
CAediting_19999	chr1_19355249_-	intronic
CAediting_20000	chr1_19355314_-	intronic
CAediting_20001	chr1_19357132_-	ncRNA_intronic
CAediting_20002	chr1_19362333_-	ncRNA_intronic
CAediting_20003	chr1_19362339_-	ncRNA_intronic
CAediting_20004	chr1_19362351_-	ncRNA_intronic
CAediting_20005	chr1_19362357_-	ncRNA_intronic
CAediting_20006	chr1_19362486_-	ncRNA_intronic
CAediting_20007	chr1_19362580_-	ncRNA_intronic
CAediting_20008	chr1_19362596_-	ncRNA_intronic
CAediting_20009	chr1_19363112_-	ncRNA_intronic
CAediting_20010	chr1_19363115_-	ncRNA_intronic
CAediting_20011	chr1_19363136_-	ncRNA_intronic
CAediting_20012	chr1_19363142_-	ncRNA_intronic
CAediting_20013	chr1_19363170_-	ncRNA_intronic
CAediting_20014	chr1_19363174_-	ncRNA_intronic
CAediting_20015	chr1_19363178_-	ncRNA_intronic
CAediting_20016	chr1_19363184_-	ncRNA_intronic
CAediting_20017	chr1_19364879_-	ncRNA_intronic
CAediting_20018	chr1_19364893_-	ncRNA_intronic
CAediting_20019	chr1_19364915_-	ncRNA_intronic
CAediting_20020	chr1_19364923_-	ncRNA_intronic
CAediting_20021	chr1_19364939_-	ncRNA_intronic
CAediting_20022	chr1_19364944_-	ncRNA_intronic
CAediting_20023	chr1_19364949_-	ncRNA_intronic
CAediting_20024	chr1_19364962_-	ncRNA_intronic
CAediting_20025	chr1_19364968_-	ncRNA_intronic
CAediting_20026	chr1_19364971_-	ncRNA_intronic
CAediting_20027	chr1_19364975_-	ncRNA_intronic
CAediting_20028	chr1_19364979_-	ncRNA_intronic
CAediting_20029	chr1_19364985_-	ncRNA_intronic
CAediting_20030	chr1_19364991_-	ncRNA_intronic
CAediting_20031	chr1_19365014_-	ncRNA_intronic
CAediting_20032	chr1_19365015_-	ncRNA_intronic
CAediting_20033	chr1_19365021_-	ncRNA_intronic
CAediting_20034	chr1_19365024_-	ncRNA_intronic
CAediting_20035	chr1_19365026_-	ncRNA_intronic
CAediting_20036	chr1_19365029_-	ncRNA_intronic
CAediting_20037	chr1_19365046_-	ncRNA_intronic
CAediting_20038	chr1_19365062_-	ncRNA_intronic
CAediting_20039	chr1_19365063_-	ncRNA_intronic
CAediting_20040	chr1_19365111_-	ncRNA_intronic
CAediting_20041	chr1_19365116_-	ncRNA_intronic
CAediting_20042	chr1_19365117_-	ncRNA_intronic
CAediting_20043	chr1_19365119_-	ncRNA_intronic
CAediting_20044	chr1_19365586_-	ncRNA_intronic
CAediting_20045	chr1_19365614_-	ncRNA_intronic
CAediting_20046	chr1_19365734_-	ncRNA_intronic
CAediting_20047	chr1_19365751_-	ncRNA_intronic
CAediting_20048	chr1_19365771_-	ncRNA_intronic
CAediting_20049	chr1_19366280_-	ncRNA_intronic
CAediting_20050	chr1_19366560_-	ncRNA_intronic
CAediting_20051	chr1_19366563_-	ncRNA_intronic
CAediting_20052	chr1_19366566_-	ncRNA_intronic
CAediting_20053	chr1_19366588_-	ncRNA_intronic
CAediting_20054	chr1_19366606_-	ncRNA_intronic
CAediting_20055	chr1_19379161_-	ncRNA_intronic
CAediting_20056	chr1_19379166_-	ncRNA_intronic
CAediting_20057	chr1_19379167_-	ncRNA_intronic
CAediting_20058	chr1_19379223_-	ncRNA_intronic
CAediting_20059	chr1_19379278_-	ncRNA_intronic
CAediting_20060	chr1_19379292_-	ncRNA_intronic
CAediting_20061	chr1_19379345_-	ncRNA_intronic
CAediting_20062	chr1_19381086_-	ncRNA_intronic
CAediting_20063	chr1_19381632_-	ncRNA_intronic
CAediting_20064	chr1_19381730_-	ncRNA_intronic
CAediting_20065	chr1_19381739_-	ncRNA_intronic
CAediting_20066	chr1_19381785_-	ncRNA_intronic
CAediting_20067	chr1_19381790_-	ncRNA_intronic
CAediting_20068	chr1_19381805_-	ncRNA_intronic
CAediting_20069	chr1_19383384_-	ncRNA_intronic
CAediting_20070	chr1_19392696_-	ncRNA_intronic
CAediting_20071	chr1_19394141_-	ncRNA_intronic
CAediting_20072	chr1_19394281_-	ncRNA_intronic
CAediting_20073	chr1_19394597_-	ncRNA_intronic
CAediting_20074	chr1_19394710_-	ncRNA_intronic
CAediting_20075	chr1_19394714_-	ncRNA_intronic
CAediting_20076	chr1_19406875_-	ncRNA_intronic
CAediting_20077	chr1_19411159_-	ncRNA_intronic
CAediting_20078	chr1_19411171_-	ncRNA_intronic
CAediting_20079	chr1_19413388_-	ncRNA_intronic
CAediting_20080	chr1_19413454_-	ncRNA_intronic
CAediting_20081	chr1_19413533_-	ncRNA_intronic
CAediting_20082	chr1_19416743_-	ncRNA_intronic
CAediting_20083	chr1_19416744_-	ncRNA_intronic
CAediting_20084	chr1_19422547_-	ncRNA_intronic
CAediting_20085	chr1_19422674_-	ncRNA_intronic
CAediting_20086	chr1_19422725_-	ncRNA_intronic
CAediting_20087	chr1_19423617_-	ncRNA_intronic
CAediting_20088	chr1_19423622_-	ncRNA_intronic
CAediting_20089	chr1_19423628_-	ncRNA_intronic
CAediting_20090	chr1_19423662_-	ncRNA_intronic
CAediting_20091	chr1_19423685_-	ncRNA_intronic
CAediting_20092	chr1_19423688_-	ncRNA_intronic
CAediting_20093	chr1_19423689_-	ncRNA_intronic
CAediting_20094	chr1_19423693_-	ncRNA_intronic
CAediting_20095	chr1_19423722_-	ncRNA_intronic
CAediting_20096	chr1_19423766_-	ncRNA_intronic
CAediting_20097	chr1_19423785_-	ncRNA_intronic
CAediting_20098	chr1_19423816_-	ncRNA_intronic
CAediting_20099	chr1_19423837_-	ncRNA_intronic
CAediting_20100	chr1_19423844_-	ncRNA_intronic
CAediting_20101	chr1_19423855_-	ncRNA_intronic
CAediting_20102	chr1_19424058_-	ncRNA_intronic
CAediting_20103	chr1_19424084_-	ncRNA_intronic
CAediting_20104	chr1_19431613_-	ncRNA_intronic
CAediting_20105	chr1_19443157_-	ncRNA_intronic
CAediting_20106	chr1_19443394_-	ncRNA_intronic
CAediting_20107	chr1_19444780_-	ncRNA_intronic
CAediting_20108	chr1_19445015_-	ncRNA_intronic
CAediting_20109	chr1_19447341_-	ncRNA_intronic
CAediting_20110	chr1_19447357_-	ncRNA_intronic
CAediting_20111	chr1_19447358_-	ncRNA_intronic
CAediting_20112	chr1_19447384_-	ncRNA_intronic
CAediting_20113	chr1_19447448_-	ncRNA_intronic
CAediting_20114	chr1_19447467_-	ncRNA_intronic
CAediting_20115	chr1_19447485_-	ncRNA_intronic
CAediting_20116	chr1_19447494_-	ncRNA_intronic
CAediting_20117	chr1_19447507_-	ncRNA_intronic
CAediting_20118	chr1_19447508_-	ncRNA_intronic
CAediting_20119	chr1_19447510_-	ncRNA_intronic
CAediting_20120	chr1_19447524_-	ncRNA_intronic
CAediting_20121	chr1_19447530_-	ncRNA_intronic
CAediting_20122	chr1_19449536_-	ncRNA_intronic
CAediting_20123	chr1_19449543_-	ncRNA_intronic
CAediting_20124	chr1_19449545_-	ncRNA_intronic
CAediting_20125	chr1_19449553_-	ncRNA_intronic
CAediting_20126	chr1_19449570_-	ncRNA_intronic
CAediting_20127	chr1_19449571_-	ncRNA_intronic
CAediting_20128	chr1_19449583_-	ncRNA_intronic
CAediting_20129	chr1_19449596_-	ncRNA_intronic
CAediting_20130	chr1_19449600_-	ncRNA_intronic
CAediting_20131	chr1_19449616_-	ncRNA_intronic
CAediting_20132	chr1_19449622_-	ncRNA_intronic
CAediting_20133	chr1_19449625_-	ncRNA_intronic
CAediting_20134	chr1_19449640_-	ncRNA_intronic
CAediting_20135	chr1_19449673_-	ncRNA_intronic
CAediting_20136	chr1_19449676_-	ncRNA_intronic
CAediting_20137	chr1_19449677_-	ncRNA_intronic
CAediting_20138	chr1_19449701_-	ncRNA_intronic
CAediting_20139	chr1_19452896_-	ncRNA_intronic
CAediting_20140	chr1_19452901_-	ncRNA_intronic
CAediting_20141	chr1_19452915_-	ncRNA_intronic
CAediting_20142	chr1_19452941_-	ncRNA_intronic
CAediting_20143	chr1_19452942_-	ncRNA_intronic
CAediting_20144	chr1_19452982_-	ncRNA_intronic
CAediting_20145	chr1_19452987_-	ncRNA_intronic
CAediting_20146	chr1_19452993_-	ncRNA_intronic
CAediting_20147	chr1_19453399_-	ncRNA_intronic
CAediting_20148	chr1_19456070_-	ncRNA_intronic
CAediting_20149	chr1_19456072_-	ncRNA_intronic
CAediting_20150	chr1_19460362_-	ncRNA_intronic
CAediting_20151	chr1_19460480_-	ncRNA_intronic
CAediting_20152	chr1_19460481_-	ncRNA_intronic
CAediting_20153	chr1_19460503_-	ncRNA_intronic
CAediting_20154	chr1_19460542_-	ncRNA_intronic
CAediting_20155	chr1_19460547_-	ncRNA_intronic
CAediting_20156	chr1_19460663_-	ncRNA_intronic
CAediting_20157	chr1_19462227_-	ncRNA_intronic
CAediting_20158	chr1_19462263_-	ncRNA_intronic
CAediting_20159	chr1_19462725_-	ncRNA_intronic
CAediting_20160	chr1_19463914_-	ncRNA_intronic
CAediting_20161	chr1_19463915_-	ncRNA_intronic
CAediting_20162	chr1_19463917_-	ncRNA_intronic
CAediting_20163	chr1_19463950_-	ncRNA_intronic
CAediting_20164	chr1_19463975_-	ncRNA_intronic
CAediting_20165	chr1_19463977_-	ncRNA_intronic
CAediting_20166	chr1_19463995_-	ncRNA_intronic
CAediting_20167	chr1_19464009_-	ncRNA_intronic
CAediting_20168	chr1_19464063_-	ncRNA_intronic
CAediting_20169	chr1_19464065_-	ncRNA_intronic
CAediting_20170	chr1_19464070_-	ncRNA_intronic
CAediting_20171	chr1_19464075_-	ncRNA_intronic
CAediting_20172	chr1_19464105_-	ncRNA_intronic
CAediting_20173	chr1_19464111_-	ncRNA_intronic
CAediting_20174	chr1_19464143_-	ncRNA_intronic
CAediting_20175	chr1_19464352_-	ncRNA_intronic
CAediting_20176	chr1_19464359_-	ncRNA_intronic
CAediting_20177	chr1_19464420_-	ncRNA_intronic
CAediting_20178	chr1_19464424_-	ncRNA_intronic
CAediting_20179	chr1_19464430_-	ncRNA_intronic
CAediting_20180	chr1_19464456_-	ncRNA_intronic
CAediting_20181	chr1_19464497_-	ncRNA_intronic
CAediting_20182	chr1_19464559_-	ncRNA_intronic
CAediting_20183	chr1_19464564_-	ncRNA_intronic
CAediting_20184	chr1_19464565_-	ncRNA_intronic
CAediting_20185	chr1_19464571_-	ncRNA_intronic
CAediting_20186	chr1_19467028_-	ncRNA_intronic
CAediting_20187	chr1_19467110_-	ncRNA_intronic
CAediting_20188	chr1_19467155_-	ncRNA_intronic
CAediting_20189	chr1_19470167_-	ncRNA_intronic
CAediting_20190	chr1_19471608_-	ncRNA_intronic
CAediting_20191	chr1_19471745_-	ncRNA_intronic
CAediting_20192	chr1_19471755_-	ncRNA_intronic
CAediting_20193	chr1_19472807_-	ncRNA_intronic
CAediting_20194	chr1_19472842_-	ncRNA_intronic
CAediting_20195	chr1_19472846_-	ncRNA_intronic
CAediting_20196	chr1_19472850_-	ncRNA_intronic
CAediting_20197	chr1_19472856_-	ncRNA_intronic
CAediting_20198	chr1_19472871_-	ncRNA_intronic
CAediting_20199	chr1_19472882_-	ncRNA_intronic
CAediting_20200	chr1_19472895_-	ncRNA_intronic
CAediting_20201	chr1_19472922_-	ncRNA_intronic
CAediting_20202	chr1_19472989_-	ncRNA_intronic
CAediting_20203	chr1_19472990_-	ncRNA_intronic
CAediting_20204	chr1_19472996_-	ncRNA_intronic
CAediting_20205	chr1_19473008_-	ncRNA_intronic
CAediting_20206	chr1_19473781_-	ncRNA_intronic
CAediting_20207	chr1_19473782_-	ncRNA_intronic
CAediting_20208	chr1_19473807_-	ncRNA_intronic
CAediting_20209	chr1_19473812_-	ncRNA_intronic
CAediting_20210	chr1_19473826_-	ncRNA_intronic
CAediting_20211	chr1_19473864_-	ncRNA_intronic
CAediting_20212	chr1_19474058_-	ncRNA_intronic
CAediting_20213	chr1_19474068_-	ncRNA_intronic
CAediting_20214	chr1_19474081_-	ncRNA_intronic
CAediting_20215	chr1_19474093_-	ncRNA_intronic
CAediting_20216	chr1_19474134_-	ncRNA_intronic
CAediting_20217	chr1_19474140_-	ncRNA_intronic
CAediting_20218	chr1_19474173_-	ncRNA_intronic
CAediting_20219	chr1_19474175_-	ncRNA_intronic
CAediting_20220	chr1_19474178_-	ncRNA_intronic
CAediting_20221	chr1_19474189_-	ncRNA_intronic
CAediting_20222	chr1_19474197_-	ncRNA_intronic
CAediting_20223	chr1_19474200_-	ncRNA_intronic
CAediting_20224	chr1_19474259_-	ncRNA_intronic
CAediting_20225	chr1_19474268_-	ncRNA_intronic
CAediting_20226	chr1_19474281_-	ncRNA_intronic
CAediting_20227	chr1_19476078_-	ncRNA_intronic
CAediting_20228	chr1_19476119_-	ncRNA_intronic
CAediting_20229	chr1_19476120_-	ncRNA_intronic
CAediting_20230	chr1_19476144_-	ncRNA_intronic
CAediting_20231	chr1_19476152_-	ncRNA_intronic
CAediting_20232	chr1_19476158_-	ncRNA_intronic
CAediting_20233	chr1_19476348_-	ncRNA_intronic
CAediting_20234	chr1_19476409_-	ncRNA_intronic
CAediting_20235	chr1_19476413_-	ncRNA_intronic
CAediting_20236	chr1_19477848_-	ncRNA_intronic
CAediting_20237	chr1_19479174_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_19969	chr1_19340610_-	SINE	Alu	AluJr
CAediting_19971	chr1_19346891_-	SINE	Alu	AluSq2
CAediting_19972	chr1_19346892_-	SINE	Alu	AluSq2
CAediting_19973	chr1_19346916_-	SINE	Alu	AluSq2
CAediting_19974	chr1_19346926_-	SINE	Alu	AluSq2
CAediting_19975	chr1_19346935_-	SINE	Alu	AluSq2
CAediting_19976	chr1_19346952_-	SINE	Alu	AluSq2
CAediting_19977	chr1_19346961_-	SINE	Alu	AluSq2
CAediting_19978	chr1_19346962_-	SINE	Alu	AluSq2
CAediting_19979	chr1_19347036_-	SINE	Alu	AluSq2
CAediting_19980	chr1_19347044_-	SINE	Alu	AluSq2
CAediting_19981	chr1_19347045_-	SINE	Alu	AluSq2
CAediting_19982	chr1_19347059_-	SINE	Alu	AluSq2
CAediting_19983	chr1_19347060_-	SINE	Alu	AluSq2
CAediting_19984	chr1_19347066_-	SINE	Alu	AluSq2
CAediting_19985	chr1_19347087_-	SINE	Alu	AluSq2
CAediting_19986	chr1_19347120_-	SINE	Alu	AluSq2
CAediting_19987	chr1_19347136_-	SINE	Alu	AluSq2
CAediting_19988	chr1_19350753_-	SINE	Alu	AluJb
CAediting_19989	chr1_19350776_-	SINE	Alu	AluJb
CAediting_19990	chr1_19350813_-	SINE	Alu	AluJb
CAediting_19991	chr1_19350814_-	SINE	Alu	AluJb
CAediting_19992	chr1_19350836_-	SINE	Alu	AluJb
CAediting_19993	chr1_19350844_-	SINE	Alu	AluJb
CAediting_19994	chr1_19350850_-	SINE	Alu	AluJb
CAediting_19995	chr1_19350911_-	SINE	Alu	AluJb
CAediting_19996	chr1_19351107_-	SINE	Alu	AluSg
CAediting_19997	chr1_19351161_-	SINE	Alu	AluSg
CAediting_19998	chr1_19351162_-	SINE	Alu	AluSg
CAediting_19999	chr1_19355249_-	SINE	Alu	AluSz
CAediting_20000	chr1_19355314_-	SINE	Alu	AluSz
CAediting_20001	chr1_19357132_-	SINE	Alu	AluSx1
CAediting_20002	chr1_19362333_-	SINE	Alu	AluSx1
CAediting_20003	chr1_19362339_-	SINE	Alu	AluSx1
CAediting_20004	chr1_19362351_-	SINE	Alu	AluSx1
CAediting_20005	chr1_19362357_-	SINE	Alu	AluSx1
CAediting_20006	chr1_19362486_-	SINE	Alu	AluSx1
CAediting_20007	chr1_19362580_-	SINE	Alu	FLAM_C
CAediting_20008	chr1_19362596_-	SINE	Alu	FLAM_C
CAediting_20009	chr1_19363112_-	SINE	Alu	AluJo
CAediting_20010	chr1_19363115_-	SINE	Alu	AluJo
CAediting_20011	chr1_19363136_-	SINE	Alu	AluJo
CAediting_20012	chr1_19363142_-	SINE	Alu	AluJo
CAediting_20013	chr1_19363170_-	SINE	Alu	AluJo
CAediting_20014	chr1_19363174_-	SINE	Alu	AluJo
CAediting_20015	chr1_19363178_-	SINE	Alu	AluJo
CAediting_20016	chr1_19363184_-	SINE	Alu	AluJo
CAediting_20017	chr1_19364879_-	SINE	Alu	AluJr
CAediting_20018	chr1_19364893_-	SINE	Alu	AluJr
CAediting_20019	chr1_19364915_-	SINE	Alu	AluJr
CAediting_20020	chr1_19364923_-	SINE	Alu	AluJr
CAediting_20021	chr1_19364939_-	SINE	Alu	AluJr
CAediting_20022	chr1_19364944_-	SINE	Alu	AluJr
CAediting_20023	chr1_19364949_-	SINE	Alu	AluJr
CAediting_20024	chr1_19364962_-	SINE	Alu	AluJr
CAediting_20025	chr1_19364968_-	SINE	Alu	AluJr
CAediting_20026	chr1_19364971_-	SINE	Alu	AluJr
CAediting_20027	chr1_19364975_-	SINE	Alu	AluJr
CAediting_20028	chr1_19364979_-	SINE	Alu	AluJr
CAediting_20029	chr1_19364985_-	SINE	Alu	AluJr
CAediting_20030	chr1_19364991_-	SINE	Alu	AluJr
CAediting_20031	chr1_19365014_-	SINE	Alu	AluJr
CAediting_20032	chr1_19365015_-	SINE	Alu	AluJr
CAediting_20033	chr1_19365021_-	SINE	Alu	AluJr
CAediting_20034	chr1_19365024_-	SINE	Alu	AluJr
CAediting_20035	chr1_19365026_-	SINE	Alu	AluJr
CAediting_20036	chr1_19365029_-	SINE	Alu	AluJr
CAediting_20037	chr1_19365046_-	SINE	Alu	AluJr
CAediting_20038	chr1_19365062_-	SINE	Alu	AluJr
CAediting_20039	chr1_19365063_-	SINE	Alu	AluJr
CAediting_20040	chr1_19365111_-	SINE	Alu	AluJr
CAediting_20041	chr1_19365116_-	SINE	Alu	AluJr
CAediting_20042	chr1_19365117_-	SINE	Alu	AluJr
CAediting_20043	chr1_19365119_-	SINE	Alu	AluJr
CAediting_20044	chr1_19365586_-	SINE	Alu	AluSp
CAediting_20045	chr1_19365614_-	SINE	Alu	AluSp
CAediting_20046	chr1_19365734_-	SINE	Alu	AluSp
CAediting_20047	chr1_19365751_-	SINE	Alu	AluSp
CAediting_20048	chr1_19365771_-	SINE	Alu	AluSp
CAediting_20049	chr1_19366280_-	SINE	Alu	FLAM_C
CAediting_20050	chr1_19366560_-	SINE	Alu	AluSq
CAediting_20051	chr1_19366563_-	SINE	Alu	AluSq
CAediting_20052	chr1_19366566_-	SINE	Alu	AluSq
CAediting_20053	chr1_19366588_-	SINE	Alu	AluSq
CAediting_20054	chr1_19366606_-	SINE	Alu	AluSq
CAediting_20055	chr1_19379161_-	SINE	Alu	AluSz6
CAediting_20056	chr1_19379166_-	SINE	Alu	AluSz6
CAediting_20057	chr1_19379167_-	SINE	Alu	AluSz6
CAediting_20058	chr1_19379223_-	SINE	Alu	AluSz6
CAediting_20059	chr1_19379278_-	SINE	Alu	AluSz6
CAediting_20060	chr1_19379292_-	SINE	Alu	AluSz6
CAediting_20061	chr1_19379345_-	SINE	Alu	AluSz6
CAediting_20062	chr1_19381086_-	SINE	Alu	AluSx3
CAediting_20063	chr1_19381632_-	SINE	Alu	AluJr4
CAediting_20064	chr1_19381730_-	SINE	Alu	AluSx3
CAediting_20065	chr1_19381739_-	SINE	Alu	AluSx3
CAediting_20066	chr1_19381785_-	SINE	Alu	AluSx3
CAediting_20067	chr1_19381790_-	SINE	Alu	AluSx3
CAediting_20068	chr1_19381805_-	SINE	Alu	AluSx3
CAediting_20069	chr1_19383384_-	SINE	Alu	AluSz
CAediting_20070	chr1_19392696_-	SINE	Alu	AluJb
CAediting_20071	chr1_19394141_-	SINE	Alu	AluSx
CAediting_20072	chr1_19394281_-	SINE	Alu	AluSx
CAediting_20073	chr1_19394597_-	SINE	Alu	AluSx
CAediting_20074	chr1_19394710_-	SINE	Alu	AluSx
CAediting_20075	chr1_19394714_-	SINE	Alu	AluSx
CAediting_20076	chr1_19406875_-	SINE	MIR	MIRb
CAediting_20077	chr1_19411159_-	SINE	Alu	AluJo
CAediting_20078	chr1_19411171_-	SINE	Alu	AluJo
CAediting_20079	chr1_19413388_-	SINE	Alu	AluJo
CAediting_20080	chr1_19413454_-	SINE	Alu	AluJo
CAediting_20081	chr1_19413533_-	SINE	Alu	AluJo
CAediting_20082	chr1_19416743_-	SINE	Alu	AluJr
CAediting_20083	chr1_19416744_-	SINE	Alu	AluJr
CAediting_20084	chr1_19422547_-	SINE	Alu	AluY
CAediting_20085	chr1_19422674_-	SINE	Alu	AluY
CAediting_20086	chr1_19422725_-	SINE	Alu	AluY
CAediting_20087	chr1_19423617_-	SINE	Alu	AluJo
CAediting_20088	chr1_19423622_-	SINE	Alu	AluJo
CAediting_20089	chr1_19423628_-	SINE	Alu	AluJo
CAediting_20090	chr1_19423662_-	SINE	Alu	AluJo
CAediting_20091	chr1_19423685_-	SINE	Alu	AluJo
CAediting_20092	chr1_19423688_-	SINE	Alu	AluJo
CAediting_20093	chr1_19423689_-	SINE	Alu	AluJo
CAediting_20094	chr1_19423693_-	SINE	Alu	AluSx1
CAediting_20095	chr1_19423722_-	SINE	Alu	AluSx1
CAediting_20096	chr1_19423766_-	SINE	Alu	AluSx1
CAediting_20097	chr1_19423785_-	SINE	Alu	AluSx1
CAediting_20098	chr1_19423816_-	SINE	Alu	AluSx1
CAediting_20099	chr1_19423837_-	SINE	Alu	AluSx1
CAediting_20100	chr1_19423844_-	SINE	Alu	AluSx1
CAediting_20101	chr1_19423855_-	SINE	Alu	AluSx1
CAediting_20102	chr1_19424058_-	SINE	Alu	AluJo
CAediting_20103	chr1_19424084_-	SINE	Alu	AluJo
CAediting_20104	chr1_19431613_-	SINE	Alu	AluY
CAediting_20105	chr1_19443157_-	SINE	Alu	AluJo
CAediting_20106	chr1_19443394_-	SINE	Alu	AluJo
CAediting_20107	chr1_19444780_-	SINE	Alu	AluSx1
CAediting_20108	chr1_19445015_-	SINE	Alu	AluSx1
CAediting_20109	chr1_19447341_-	SINE	Alu	AluSx
CAediting_20110	chr1_19447357_-	SINE	Alu	AluSx
CAediting_20111	chr1_19447358_-	SINE	Alu	AluSx
CAediting_20112	chr1_19447384_-	SINE	Alu	AluSx
CAediting_20113	chr1_19447448_-	SINE	Alu	AluSx
CAediting_20114	chr1_19447467_-	SINE	Alu	AluSx
CAediting_20115	chr1_19447485_-	SINE	Alu	AluSx
CAediting_20116	chr1_19447494_-	SINE	Alu	AluSx
CAediting_20117	chr1_19447507_-	SINE	Alu	AluSx
CAediting_20118	chr1_19447508_-	SINE	Alu	AluSx
CAediting_20119	chr1_19447510_-	SINE	Alu	AluSx
CAediting_20120	chr1_19447524_-	SINE	Alu	AluSx
CAediting_20121	chr1_19447530_-	SINE	Alu	AluSx
CAediting_20122	chr1_19449536_-	SINE	Alu	AluSz6
CAediting_20123	chr1_19449543_-	SINE	Alu	AluSz6
CAediting_20124	chr1_19449545_-	SINE	Alu	AluSz6
CAediting_20125	chr1_19449553_-	SINE	Alu	AluSz6
CAediting_20126	chr1_19449570_-	SINE	Alu	AluSz6
CAediting_20127	chr1_19449571_-	SINE	Alu	AluSz6
CAediting_20128	chr1_19449583_-	SINE	Alu	AluSz6
CAediting_20129	chr1_19449596_-	SINE	Alu	AluSz6
CAediting_20130	chr1_19449600_-	SINE	Alu	AluSz6
CAediting_20131	chr1_19449616_-	SINE	Alu	AluSz6
CAediting_20132	chr1_19449622_-	SINE	Alu	AluSz6
CAediting_20133	chr1_19449625_-	SINE	Alu	AluSz6
CAediting_20134	chr1_19449640_-	SINE	Alu	AluSz6
CAediting_20135	chr1_19449673_-	SINE	Alu	AluSz6
CAediting_20136	chr1_19449676_-	SINE	Alu	AluSz6
CAediting_20137	chr1_19449677_-	SINE	Alu	AluSz6
CAediting_20138	chr1_19449701_-	SINE	Alu	AluSz6
CAediting_20139	chr1_19452896_-	SINE	Alu	AluSx1
CAediting_20140	chr1_19452901_-	SINE	Alu	AluSx1
CAediting_20141	chr1_19452915_-	SINE	Alu	AluSx1
CAediting_20142	chr1_19452941_-	SINE	Alu	AluSx1
CAediting_20143	chr1_19452942_-	SINE	Alu	AluSx1
CAediting_20144	chr1_19452982_-	SINE	Alu	AluSx1
CAediting_20145	chr1_19452987_-	SINE	Alu	AluSx1
CAediting_20146	chr1_19452993_-	SINE	Alu	AluSx1
CAediting_20147	chr1_19453399_-	SINE	Alu	AluSx
CAediting_20148	chr1_19456070_-	SINE	Alu	AluSz6
CAediting_20149	chr1_19456072_-	SINE	Alu	AluSz6
CAediting_20150	chr1_19460362_-	SINE	Alu	AluY
CAediting_20151	chr1_19460480_-	SINE	Alu	AluY
CAediting_20152	chr1_19460481_-	SINE	Alu	AluY
CAediting_20153	chr1_19460503_-	SINE	Alu	AluY
CAediting_20154	chr1_19460542_-	SINE	Alu	AluY
CAediting_20155	chr1_19460547_-	SINE	Alu	AluY
CAediting_20156	chr1_19460663_-	SINE	Alu	FLAM_C
CAediting_20157	chr1_19462227_-	SINE	Alu	AluY
CAediting_20158	chr1_19462263_-	SINE	Alu	AluY
CAediting_20160	chr1_19463914_-	SINE	Alu	AluSz
CAediting_20161	chr1_19463915_-	SINE	Alu	AluSz
CAediting_20162	chr1_19463917_-	SINE	Alu	AluSz
CAediting_20163	chr1_19463950_-	SINE	Alu	AluSz
CAediting_20164	chr1_19463975_-	SINE	Alu	AluSz
CAediting_20165	chr1_19463977_-	SINE	Alu	AluSz
CAediting_20166	chr1_19463995_-	SINE	Alu	AluSz
CAediting_20167	chr1_19464009_-	SINE	Alu	AluSz
CAediting_20168	chr1_19464063_-	SINE	Alu	AluSz
CAediting_20169	chr1_19464065_-	SINE	Alu	AluSz
CAediting_20170	chr1_19464070_-	SINE	Alu	AluSz
CAediting_20171	chr1_19464075_-	SINE	Alu	AluSz
CAediting_20172	chr1_19464105_-	SINE	Alu	AluSz
CAediting_20173	chr1_19464111_-	SINE	Alu	AluSz
CAediting_20174	chr1_19464143_-	SINE	Alu	AluSz
CAediting_20175	chr1_19464352_-	SINE	Alu	AluY
CAediting_20176	chr1_19464359_-	SINE	Alu	AluY
CAediting_20177	chr1_19464420_-	SINE	Alu	AluY
CAediting_20178	chr1_19464424_-	SINE	Alu	AluY
CAediting_20179	chr1_19464430_-	SINE	Alu	AluY
CAediting_20180	chr1_19464456_-	SINE	Alu	AluY
CAediting_20181	chr1_19464497_-	SINE	Alu	AluY
CAediting_20182	chr1_19464559_-	SINE	Alu	AluY
CAediting_20183	chr1_19464564_-	SINE	Alu	AluY
CAediting_20184	chr1_19464565_-	SINE	Alu	AluY
CAediting_20185	chr1_19464571_-	SINE	Alu	AluY
CAediting_20186	chr1_19467028_-	SINE	Alu	AluJr
CAediting_20187	chr1_19467110_-	SINE	Alu	AluJr
CAediting_20188	chr1_19467155_-	SINE	Alu	AluJr
CAediting_20189	chr1_19470167_-	SINE	Alu	AluJb
CAediting_20190	chr1_19471608_-	SINE	Alu	AluY
CAediting_20191	chr1_19471745_-	SINE	Alu	AluY
CAediting_20192	chr1_19471755_-	SINE	Alu	AluY
CAediting_20193	chr1_19472807_-	SINE	Alu	AluY
CAediting_20194	chr1_19472842_-	SINE	Alu	AluY
CAediting_20195	chr1_19472846_-	SINE	Alu	AluY
CAediting_20196	chr1_19472850_-	SINE	Alu	AluY
CAediting_20197	chr1_19472856_-	SINE	Alu	AluY
CAediting_20198	chr1_19472871_-	SINE	Alu	AluY
CAediting_20199	chr1_19472882_-	SINE	Alu	AluY
CAediting_20200	chr1_19472895_-	SINE	Alu	AluY
CAediting_20201	chr1_19472922_-	SINE	Alu	AluY
CAediting_20202	chr1_19472989_-	SINE	Alu	AluY
CAediting_20203	chr1_19472990_-	SINE	Alu	AluY
CAediting_20204	chr1_19472996_-	SINE	Alu	AluY
CAediting_20205	chr1_19473008_-	SINE	Alu	AluY
CAediting_20206	chr1_19473781_-	SINE	Alu	AluSp
CAediting_20207	chr1_19473782_-	SINE	Alu	AluSp
CAediting_20208	chr1_19473807_-	SINE	Alu	AluSp
CAediting_20209	chr1_19473812_-	SINE	Alu	AluSp
CAediting_20210	chr1_19473826_-	SINE	Alu	AluSp
CAediting_20211	chr1_19473864_-	SINE	Alu	AluSp
CAediting_20212	chr1_19474058_-	SINE	Alu	AluJb
CAediting_20213	chr1_19474068_-	SINE	Alu	AluJb
CAediting_20214	chr1_19474081_-	SINE	Alu	AluJb
CAediting_20215	chr1_19474093_-	SINE	Alu	AluJb
CAediting_20216	chr1_19474134_-	SINE	Alu	AluJb
CAediting_20217	chr1_19474140_-	SINE	Alu	AluJb
CAediting_20218	chr1_19474173_-	SINE	Alu	AluJb
CAediting_20219	chr1_19474175_-	SINE	Alu	AluJb
CAediting_20220	chr1_19474178_-	SINE	Alu	AluJb
CAediting_20221	chr1_19474189_-	SINE	Alu	AluJb
CAediting_20222	chr1_19474197_-	SINE	Alu	AluJb
CAediting_20223	chr1_19474200_-	SINE	Alu	AluJb
CAediting_20224	chr1_19474259_-	SINE	Alu	AluJb
CAediting_20225	chr1_19474268_-	SINE	Alu	AluJb
CAediting_20226	chr1_19474281_-	SINE	Alu	AluJb
CAediting_20227	chr1_19476078_-	SINE	Alu	AluJo
CAediting_20228	chr1_19476119_-	SINE	Alu	AluJo
CAediting_20229	chr1_19476120_-	SINE	Alu	AluJo
CAediting_20230	chr1_19476144_-	SINE	Alu	AluJo
CAediting_20231	chr1_19476152_-	SINE	Alu	AluJo
CAediting_20232	chr1_19476158_-	SINE	Alu	AluJo
CAediting_20233	chr1_19476348_-	SINE	Alu	AluJo
CAediting_20234	chr1_19476409_-	SINE	Alu	AluJo
CAediting_20235	chr1_19476413_-	SINE	Alu	AluJo
CAediting_20236	chr1_19477848_-	SINE	Alu	FLAM_A
CAediting_20237	chr1_19479174_-	SINE	Alu	AluSx3

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RNA A-to-I editing events in the alternative splicing sites for CAPZB

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000077549.16.CAPZB.

Correlation between RNA A-to-I editing and PSI for ENSG00000077549.16.CAPZB.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CAPZB

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CAPZB

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CAPZB

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_468389	chr6_31355314_-	ENSG00000077549.16	ENST00000264203	hsa-miR-6891-5p	19339354	19339360	7mer-m8	19339353	19339372	149	-23.66
CAediting_468389	chr6_31355314_-	ENSG00000077549.16	ENST00000375142	hsa-miR-6891-5p	19339354	19339360	7mer-m8	19339353	19339372	149	-23.66

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000077549.16	ENST00000264203	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96
CAediting_1229414	chr17_67471546_+	ENSG00000077549.16	ENST00000264203	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96
CAediting_1229415	chr17_67471547_+	ENSG00000077549.16	ENST00000264203	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96
CAediting_1229415	chr17_67471547_+	ENSG00000077549.16	ENST00000375142	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96
CAediting_1229413	chr17_67471544_+	ENSG00000077549.16	ENST00000375142	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96
CAediting_1229414	chr17_67471546_+	ENSG00000077549.16	ENST00000375142	hsa-miR-548aa	19338892	19338897	6mer	19338885	19338910	149	-13.96

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CAPZB

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CAPZB

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CAPZB

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CAPZB

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CAPZB

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CAPZB

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CAPZB	C0007097	Carcinoma	1	CTD_human
CAPZB	C0024667	Animal Mammary Neoplasms	1	CTD_human
CAPZB	C0024668	Mammary Neoplasms, Experimental	1	CTD_human
CAPZB	C0205696	Anaplastic carcinoma	1	CTD_human
CAPZB	C0205697	Carcinoma, Spindle-Cell	1	CTD_human
CAPZB	C0205698	Undifferentiated carcinoma	1	CTD_human
CAPZB	C0205699	Carcinomatosis	1	CTD_human
CAPZB	C0948089	Acute Coronary Syndrome	1	CTD_human
CAPZB	C1257925	Mammary Carcinoma, Animal	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene