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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CHAF1B (CAeditome ID:8208)

Gene summary for CHAF1B

check button Gene summary
Gene informationGene symbol

CHAF1B

Gene ID

8208

Gene namechromatin assembly factor 1 subunit B
SynonymsCAF-1|CAF-IP60|CAF1|CAF1A|CAF1P60|MPHOSPH7|MPP7
Cytomap

21q22.12-q22.13

Type of geneprotein-coding
Descriptionchromatin assembly factor 1 subunit BCAF-1 subunit BCAF-I 60 kDa subunitCAF-I p60M-phase phosphoprotein 7chromatin assembly factor I p60 subunithuman chromatin assembly factor-I p60 subunit
Modification date20210518
UniProtAcc

Q13112

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CHAF1B

GO:0006335

Chromatin assembly factor 1 subunit B

14718166

CHAF1B

GO:0031497

Chromatin assembly factor 1 subunit B

8858152

CHAF1B

GO:0000785

Chromatin assembly factor 1 subunit B

14718166

CHAF1B

GO:0005654

Chromatin assembly factor 1 subunit B

0000052

CHAF1B

GO:0032991

Chromatin assembly factor 1 subunit B

14718166

CHAF1B

GO:0033186

Chromatin assembly factor 1 subunit B

8858152


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RNA A-to-I events for CHAF1B

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000159259.7

check button RNA A-to-I editing events in Cancer.
CAediting_1451474(36389351, +), CAediting_1451475(36396065, +), CAediting_1451476(36396141, +), CAediting_1451477(36396152, +), CAediting_1451478(36396402, +), CAediting_1451479(36396446, +), CAediting_1451480(36396455, +), CAediting_1451481(36396459, +), CAediting_1451482(36396460, +), CAediting_1451483(36396462, +), CAediting_1451484(36396465, +), CAediting_1451485(36396485, +), CAediting_1451486(36396496, +), CAediting_1451487(36396503, +), CAediting_1451488(36396512, +), CAediting_1451489(36396516, +), CAediting_1451490(36396529, +), CAediting_1451491(36396532, +), CAediting_1451492(36396540, +), CAediting_1451493(36396542, +), CAediting_1451494(36396574, +), CAediting_1451495(36396583, +), CAediting_1451496(36397948, +), CAediting_1451497(36397950, +), CAediting_1451498(36398399, +), CAediting_1451499(36398411, +), CAediting_1451500(36398453, +), CAediting_1451501(36398502, +), CAediting_1451502(36398509, +), CAediting_1451503(36398525, +), CAediting_1451504(36398562, +), CAediting_1451505(36398580, +), CAediting_1451506(36398581, +), CAediting_1451507(36401130, +), CAediting_1451508(36401182, +), CAediting_1451509(36403249, +), CAediting_1451510(36403311, +), CAediting_1451511(36403336, +), CAediting_1451512(36403337, +), CAediting_1451513(36403346, +), CAediting_1451514(36403363, +), CAediting_1451515(36403382, +), CAediting_1451516(36403422, +), CAediting_1451517(36407706, +), CAediting_1451518(36417091, +), CAediting_1451519(36417095, +), CAediting_1451520(36417136, +), CAediting_1451521(36417146, +), CAediting_1451522(36417151, +), CAediting_1451523(36417184, +), CAediting_1451524(36417189, +), CAediting_1451525(36417198, +), CAediting_1451526(36417201, +), CAediting_1451527(36417217, +), CAediting_1451528(36417227, +), CAediting_1451529(36417312, +), CAediting_1451530(36417383, +), CAediting_1451531(36417404, +), CAediting_1451532(36417429, +), CAediting_1451533(36417431, +), CAediting_1451534(36417459, +), CAediting_1451535(36417469, +), CAediting_1451536(36417471, +), CAediting_1451537(36417495, +), CAediting_1451538(36417496, +), CAediting_1451539(36417504, +), CAediting_1451540(36417513, +), CAediting_1451541(36417540, +), CAediting_1451542(36417564, +), CAediting_1451543(36417590, +), CAediting_1451544(36417592, +), CAediting_1451545(36417604, +), CAediting_1451546(36417701, +), CAediting_1451547(36417702, +), CAediting_1451548(36417705, +), CAediting_1451549(36417706, +), CAediting_1451550(36417728, +), CAediting_1451551(36417741, +), CAediting_1451552(36417750, +), CAediting_1451553(36418038, +), CAediting_1451554(36418040, +), CAediting_1451555(36418054, +), CAediting_1451556(36418089, +), CAediting_1451557(36418107, +), CAediting_1451558(36418113, +), CAediting_1451559(36418114, +), CAediting_1451560(36418143, +), CAediting_1451561(36418153, +), CAediting_1451562(36418159, +), CAediting_1451563(36418169, +), CAediting_1451564(36418179, +), CAediting_1451565(36418180, +), CAediting_1451566(36418188, +), CAediting_1451567(36418194, +), CAediting_1451568(36418197, +), CAediting_1451569(36418199, +), CAediting_1451570(36418236, +), CAediting_1451571(36418259, +), CAediting_1451572(36418264, +), CAediting_1451573(36418273, +), CAediting_1451574(36418274, +), CAediting_1451575(36418286, +), CAediting_1451576(36418295, +), CAediting_1451577(36418561, +), CAediting_1451578(36418585, +), CAediting_1451579(36418587, +), CAediting_1451580(36418593, +), CAediting_1451581(36418594, +), CAediting_1451582(36418599, +), CAediting_1451583(36418602, +), CAediting_1451584(36418610, +), CAediting_1451585(36418615, +), CAediting_1451586(36418616, +), CAediting_1451587(36418629, +), CAediting_1451588(36418634, +), CAediting_1451589(36418642, +), CAediting_1451590(36418650, +), CAediting_1451591(36418653, +), CAediting_1451592(36418662, +), CAediting_1451593(36418663, +), CAediting_1451594(36418665, +), CAediting_1451595(36418673, +), CAediting_1451596(36418678, +), CAediting_1451597(36418684, +), CAediting_1451598(36418687, +), CAediting_1451599(36418688, +), CAediting_1451600(36418689, +), CAediting_1451601(36418690, +), CAediting_1451602(36418691, +), CAediting_1451603(36418693, +), CAediting_1451604(36418695, +), CAediting_1451605(36418696, +), CAediting_1451606(36418697, +), CAediting_1451607(36418698, +), CAediting_1451608(36418699, +), CAediting_1451609(36418702, +), CAediting_1451610(36418706, +), CAediting_1451611(36418718, +), CAediting_1451612(36418720, +), CAediting_1451613(36418722, +), CAediting_1451614(36418728, +), CAediting_1451615(36418734, +), CAediting_1451616(36418738, +), CAediting_1451617(36418751, +), CAediting_1451618(36418755, +), CAediting_1451619(36418757, +), CAediting_1451620(36418758, +), CAediting_1451621(36418761, +), CAediting_1451622(36418769, +), CAediting_1451623(36418770, +), CAediting_1451624(36418777, +), CAediting_1451625(36418783, +), CAediting_1451626(36418790, +), CAediting_1451627(36418794, +), CAediting_1451628(36418799, +), CAediting_1451629(36418814, +), CAediting_1451630(36418819, +), CAediting_1451631(36418829, +), CAediting_1451632(36418831, +), CAediting_1451633(36418837, +), CAediting_1451634(36418839, +), CAediting_1451635(36418851, +), CAediting_1451636(36418853, +), CAediting_1451637(36418856, +),

Top

RNA editing positional annotations for CHAF1B using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1451474chr21_36389351_+ncRNA_intronic
CAediting_1451475chr21_36396065_+ncRNA_intronic
CAediting_1451476chr21_36396141_+ncRNA_intronic
CAediting_1451477chr21_36396152_+ncRNA_intronic
CAediting_1451478chr21_36396402_+ncRNA_intronic
CAediting_1451479chr21_36396446_+ncRNA_intronic
CAediting_1451480chr21_36396455_+ncRNA_intronic
CAediting_1451481chr21_36396459_+ncRNA_intronic
CAediting_1451482chr21_36396460_+ncRNA_intronic
CAediting_1451483chr21_36396462_+ncRNA_intronic
CAediting_1451484chr21_36396465_+ncRNA_intronic
CAediting_1451485chr21_36396485_+ncRNA_intronic
CAediting_1451486chr21_36396496_+ncRNA_intronic
CAediting_1451487chr21_36396503_+ncRNA_intronic
CAediting_1451488chr21_36396512_+ncRNA_intronic
CAediting_1451489chr21_36396516_+ncRNA_intronic
CAediting_1451490chr21_36396529_+ncRNA_intronic
CAediting_1451491chr21_36396532_+ncRNA_intronic
CAediting_1451492chr21_36396540_+ncRNA_intronic
CAediting_1451493chr21_36396542_+ncRNA_intronic
CAediting_1451494chr21_36396574_+ncRNA_intronic
CAediting_1451495chr21_36396583_+ncRNA_intronic
CAediting_1451496chr21_36397948_+ncRNA_exonic
CAediting_1451497chr21_36397950_+ncRNA_exonic
CAediting_1451498chr21_36398399_+intronic
CAediting_1451499chr21_36398411_+intronic
CAediting_1451500chr21_36398453_+intronic
CAediting_1451501chr21_36398502_+intronic
CAediting_1451502chr21_36398509_+intronic
CAediting_1451503chr21_36398525_+intronic
CAediting_1451504chr21_36398562_+intronic
CAediting_1451505chr21_36398580_+intronic
CAediting_1451506chr21_36398581_+intronic
CAediting_1451507chr21_36401130_+ncRNA_intronic
CAediting_1451508chr21_36401182_+ncRNA_intronic
CAediting_1451509chr21_36403249_+ncRNA_intronic
CAediting_1451510chr21_36403311_+ncRNA_intronic
CAediting_1451511chr21_36403336_+ncRNA_intronic
CAediting_1451512chr21_36403337_+ncRNA_intronic
CAediting_1451513chr21_36403346_+ncRNA_intronic
CAediting_1451514chr21_36403363_+ncRNA_intronic
CAediting_1451515chr21_36403382_+ncRNA_intronic
CAediting_1451516chr21_36403422_+ncRNA_intronic
CAediting_1451517chr21_36407706_+ncRNA_intronic
CAediting_1451518chr21_36417091_+UTR3
CAediting_1451519chr21_36417095_+UTR3
CAediting_1451520chr21_36417136_+UTR3
CAediting_1451521chr21_36417146_+UTR3
CAediting_1451522chr21_36417151_+UTR3
CAediting_1451523chr21_36417184_+UTR3
CAediting_1451524chr21_36417189_+UTR3
CAediting_1451525chr21_36417198_+UTR3
CAediting_1451526chr21_36417201_+UTR3
CAediting_1451527chr21_36417217_+UTR3
CAediting_1451528chr21_36417227_+UTR3
CAediting_1451529chr21_36417312_+UTR3
CAediting_1451530chr21_36417383_+UTR3
CAediting_1451531chr21_36417404_+UTR3
CAediting_1451532chr21_36417429_+UTR3
CAediting_1451533chr21_36417431_+UTR3
CAediting_1451534chr21_36417459_+UTR3
CAediting_1451535chr21_36417469_+UTR3
CAediting_1451536chr21_36417471_+UTR3
CAediting_1451537chr21_36417495_+UTR3
CAediting_1451538chr21_36417496_+UTR3
CAediting_1451539chr21_36417504_+UTR3
CAediting_1451540chr21_36417513_+UTR3
CAediting_1451541chr21_36417540_+UTR3
CAediting_1451542chr21_36417564_+UTR3
CAediting_1451543chr21_36417590_+UTR3
CAediting_1451544chr21_36417592_+UTR3
CAediting_1451545chr21_36417604_+UTR3
CAediting_1451546chr21_36417701_+UTR3
CAediting_1451547chr21_36417702_+UTR3
CAediting_1451548chr21_36417705_+UTR3
CAediting_1451549chr21_36417706_+UTR3
CAediting_1451550chr21_36417728_+UTR3
CAediting_1451551chr21_36417741_+UTR3
CAediting_1451552chr21_36417750_+UTR3
CAediting_1451553chr21_36418038_+UTR3
CAediting_1451554chr21_36418040_+UTR3
CAediting_1451555chr21_36418054_+UTR3
CAediting_1451556chr21_36418089_+UTR3
CAediting_1451557chr21_36418107_+UTR3
CAediting_1451558chr21_36418113_+UTR3
CAediting_1451559chr21_36418114_+UTR3
CAediting_1451560chr21_36418143_+UTR3
CAediting_1451561chr21_36418153_+UTR3
CAediting_1451562chr21_36418159_+UTR3
CAediting_1451563chr21_36418169_+UTR3
CAediting_1451564chr21_36418179_+UTR3
CAediting_1451565chr21_36418180_+UTR3
CAediting_1451566chr21_36418188_+UTR3
CAediting_1451567chr21_36418194_+UTR3
CAediting_1451568chr21_36418197_+UTR3
CAediting_1451569chr21_36418199_+UTR3
CAediting_1451570chr21_36418236_+UTR3
CAediting_1451571chr21_36418259_+UTR3
CAediting_1451572chr21_36418264_+UTR3
CAediting_1451573chr21_36418273_+UTR3
CAediting_1451574chr21_36418274_+UTR3
CAediting_1451575chr21_36418286_+UTR3
CAediting_1451576chr21_36418295_+UTR3
CAediting_1451577chr21_36418561_+UTR3
CAediting_1451578chr21_36418585_+UTR3
CAediting_1451579chr21_36418587_+UTR3
CAediting_1451580chr21_36418593_+UTR3
CAediting_1451581chr21_36418594_+UTR3
CAediting_1451582chr21_36418599_+UTR3
CAediting_1451583chr21_36418602_+UTR3
CAediting_1451584chr21_36418610_+UTR3
CAediting_1451585chr21_36418615_+UTR3
CAediting_1451586chr21_36418616_+UTR3
CAediting_1451587chr21_36418629_+UTR3
CAediting_1451588chr21_36418634_+UTR3
CAediting_1451589chr21_36418642_+UTR3
CAediting_1451590chr21_36418650_+UTR3
CAediting_1451591chr21_36418653_+UTR3
CAediting_1451592chr21_36418662_+UTR3
CAediting_1451593chr21_36418663_+UTR3
CAediting_1451594chr21_36418665_+UTR3
CAediting_1451595chr21_36418673_+UTR3
CAediting_1451596chr21_36418678_+UTR3
CAediting_1451597chr21_36418684_+UTR3
CAediting_1451598chr21_36418687_+UTR3
CAediting_1451599chr21_36418688_+UTR3
CAediting_1451600chr21_36418689_+UTR3
CAediting_1451601chr21_36418690_+UTR3
CAediting_1451602chr21_36418691_+UTR3
CAediting_1451603chr21_36418693_+UTR3
CAediting_1451604chr21_36418695_+UTR3
CAediting_1451605chr21_36418696_+UTR3
CAediting_1451606chr21_36418697_+UTR3
CAediting_1451607chr21_36418698_+UTR3
CAediting_1451608chr21_36418699_+UTR3
CAediting_1451609chr21_36418702_+UTR3
CAediting_1451610chr21_36418706_+UTR3
CAediting_1451611chr21_36418718_+UTR3
CAediting_1451612chr21_36418720_+UTR3
CAediting_1451613chr21_36418722_+UTR3
CAediting_1451614chr21_36418728_+UTR3
CAediting_1451615chr21_36418734_+UTR3
CAediting_1451616chr21_36418738_+UTR3
CAediting_1451617chr21_36418751_+UTR3
CAediting_1451618chr21_36418755_+UTR3
CAediting_1451619chr21_36418757_+UTR3
CAediting_1451620chr21_36418758_+UTR3
CAediting_1451621chr21_36418761_+UTR3
CAediting_1451622chr21_36418769_+UTR3
CAediting_1451623chr21_36418770_+UTR3
CAediting_1451624chr21_36418777_+UTR3
CAediting_1451625chr21_36418783_+UTR3
CAediting_1451626chr21_36418790_+UTR3
CAediting_1451627chr21_36418794_+UTR3
CAediting_1451628chr21_36418799_+UTR3
CAediting_1451629chr21_36418814_+UTR3
CAediting_1451630chr21_36418819_+UTR3
CAediting_1451631chr21_36418829_+UTR3
CAediting_1451632chr21_36418831_+UTR3
CAediting_1451633chr21_36418837_+UTR3
CAediting_1451634chr21_36418839_+UTR3
CAediting_1451635chr21_36418851_+UTR3
CAediting_1451636chr21_36418853_+UTR3
CAediting_1451637chr21_36418856_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1451474chr21_36389351_+SINEAluAluSz
CAediting_1451475chr21_36396065_+SINEAluAluSx1
CAediting_1451476chr21_36396141_+SINEAluAluSx1
CAediting_1451477chr21_36396152_+SINEAluAluSx1
CAediting_1451478chr21_36396402_+SINEAluAluJb
CAediting_1451479chr21_36396446_+SINEAluAluJb
CAediting_1451480chr21_36396455_+SINEAluAluJb
CAediting_1451481chr21_36396459_+SINEAluAluJb
CAediting_1451482chr21_36396460_+SINEAluAluJb
CAediting_1451483chr21_36396462_+SINEAluAluJb
CAediting_1451484chr21_36396465_+SINEAluAluJb
CAediting_1451485chr21_36396485_+SINEAluAluJb
CAediting_1451486chr21_36396496_+SINEAluAluJb
CAediting_1451487chr21_36396503_+SINEAluAluJb
CAediting_1451488chr21_36396512_+SINEAluAluJb
CAediting_1451489chr21_36396516_+SINEAluAluJb
CAediting_1451490chr21_36396529_+SINEAluAluJb
CAediting_1451491chr21_36396532_+SINEAluAluJb
CAediting_1451492chr21_36396540_+SINEAluAluJb
CAediting_1451493chr21_36396542_+SINEAluAluJb
CAediting_1451494chr21_36396574_+SINEAluAluJb
CAediting_1451495chr21_36396583_+SINEAluAluJb
CAediting_1451496chr21_36397948_+SINEAluAluSz
CAediting_1451497chr21_36397950_+SINEAluAluSz
CAediting_1451498chr21_36398399_+SINEAluAluSx
CAediting_1451499chr21_36398411_+SINEAluAluSx
CAediting_1451500chr21_36398453_+SINEAluAluSx
CAediting_1451501chr21_36398502_+SINEAluAluSx
CAediting_1451502chr21_36398509_+SINEAluAluSx
CAediting_1451503chr21_36398525_+SINEAluAluSx
CAediting_1451504chr21_36398562_+SINEAluAluSx
CAediting_1451505chr21_36398580_+SINEAluAluSx
CAediting_1451506chr21_36398581_+SINEAluAluSx
CAediting_1451507chr21_36401130_+SINEAluAluSq2
CAediting_1451508chr21_36401182_+SINEAluAluSq2
CAediting_1451509chr21_36403249_+SINEAluAluSz
CAediting_1451510chr21_36403311_+SINEAluAluSz
CAediting_1451511chr21_36403336_+SINEAluAluSz
CAediting_1451512chr21_36403337_+SINEAluAluSz
CAediting_1451513chr21_36403346_+SINEAluAluSz
CAediting_1451514chr21_36403363_+SINEAluAluSz
CAediting_1451515chr21_36403382_+SINEAluAluSz
CAediting_1451516chr21_36403422_+SINEAluAluSz
CAediting_1451517chr21_36407706_+SINEAluAluSx1
CAediting_1451518chr21_36417091_+SINEAluAluJb
CAediting_1451519chr21_36417095_+SINEAluAluJb
CAediting_1451520chr21_36417136_+SINEAluAluJb
CAediting_1451521chr21_36417146_+SINEAluAluJb
CAediting_1451522chr21_36417151_+SINEAluAluJb
CAediting_1451523chr21_36417184_+SINEAluAluJb
CAediting_1451524chr21_36417189_+SINEAluAluJb
CAediting_1451525chr21_36417198_+SINEAluAluJb
CAediting_1451526chr21_36417201_+SINEAluAluJb
CAediting_1451527chr21_36417217_+SINEAluAluJb
CAediting_1451528chr21_36417227_+SINEAluAluJb
CAediting_1451529chr21_36417312_+Simple_repeatSimple_repeat(CA)n
CAediting_1451530chr21_36417383_+SINEAluAluSx
CAediting_1451531chr21_36417404_+SINEAluAluSx
CAediting_1451532chr21_36417429_+SINEAluAluSx
CAediting_1451533chr21_36417431_+SINEAluAluSx
CAediting_1451534chr21_36417459_+SINEAluAluSx
CAediting_1451535chr21_36417469_+SINEAluAluSx
CAediting_1451536chr21_36417471_+SINEAluAluSx
CAediting_1451537chr21_36417495_+SINEAluAluSx
CAediting_1451538chr21_36417496_+SINEAluAluSx
CAediting_1451539chr21_36417504_+SINEAluAluSx
CAediting_1451540chr21_36417513_+SINEAluAluSx
CAediting_1451541chr21_36417540_+SINEAluAluSx
CAediting_1451542chr21_36417564_+SINEAluAluSx
CAediting_1451543chr21_36417590_+SINEAluAluSx
CAediting_1451544chr21_36417592_+SINEAluAluSx
CAediting_1451545chr21_36417604_+SINEAluAluSx
CAediting_1451546chr21_36417701_+SINEAluAluJb
CAediting_1451547chr21_36417702_+SINEAluAluJb
CAediting_1451548chr21_36417705_+SINEAluAluJb
CAediting_1451549chr21_36417706_+SINEAluAluJb
CAediting_1451550chr21_36417728_+SINEAluAluJb
CAediting_1451551chr21_36417741_+SINEAluAluJb
CAediting_1451552chr21_36417750_+SINEAluAluJb
CAediting_1451553chr21_36418038_+SINEAluAluSg
CAediting_1451554chr21_36418040_+SINEAluAluSg
CAediting_1451555chr21_36418054_+SINEAluAluSg
CAediting_1451556chr21_36418089_+SINEAluAluSg
CAediting_1451557chr21_36418107_+SINEAluAluSg
CAediting_1451558chr21_36418113_+SINEAluAluSg
CAediting_1451559chr21_36418114_+SINEAluAluSg
CAediting_1451560chr21_36418143_+SINEAluAluSg
CAediting_1451561chr21_36418153_+SINEAluAluSg
CAediting_1451562chr21_36418159_+SINEAluAluSg
CAediting_1451563chr21_36418169_+SINEAluAluSg
CAediting_1451564chr21_36418179_+SINEAluAluSg
CAediting_1451565chr21_36418180_+SINEAluAluSg
CAediting_1451566chr21_36418188_+SINEAluAluSg
CAediting_1451567chr21_36418194_+SINEAluAluSg
CAediting_1451568chr21_36418197_+SINEAluAluSg
CAediting_1451569chr21_36418199_+SINEAluAluSg
CAediting_1451570chr21_36418236_+SINEAluAluSg
CAediting_1451571chr21_36418259_+SINEAluAluSg
CAediting_1451572chr21_36418264_+SINEAluAluSg
CAediting_1451573chr21_36418273_+SINEAluAluSg
CAediting_1451574chr21_36418274_+SINEAluAluSg
CAediting_1451575chr21_36418286_+SINEAluAluSg
CAediting_1451576chr21_36418295_+SINEAluAluSg
CAediting_1451578chr21_36418585_+SINEAluAluSz
CAediting_1451579chr21_36418587_+SINEAluAluSz
CAediting_1451580chr21_36418593_+SINEAluAluSz
CAediting_1451581chr21_36418594_+SINEAluAluSz
CAediting_1451582chr21_36418599_+SINEAluAluSz
CAediting_1451583chr21_36418602_+SINEAluAluSz
CAediting_1451584chr21_36418610_+SINEAluAluSz
CAediting_1451585chr21_36418615_+SINEAluAluSz
CAediting_1451586chr21_36418616_+SINEAluAluSz
CAediting_1451587chr21_36418629_+SINEAluAluSz
CAediting_1451588chr21_36418634_+SINEAluAluSz
CAediting_1451589chr21_36418642_+SINEAluAluSz
CAediting_1451590chr21_36418650_+SINEAluAluSz
CAediting_1451591chr21_36418653_+SINEAluAluSz
CAediting_1451592chr21_36418662_+SINEAluAluSz
CAediting_1451593chr21_36418663_+SINEAluAluSz
CAediting_1451594chr21_36418665_+SINEAluAluSz
CAediting_1451595chr21_36418673_+SINEAluAluSz
CAediting_1451596chr21_36418678_+SINEAluAluSz
CAediting_1451597chr21_36418684_+SINEAluAluSz
CAediting_1451598chr21_36418687_+SINEAluAluSz
CAediting_1451599chr21_36418688_+SINEAluAluSz
CAediting_1451600chr21_36418689_+SINEAluAluSz
CAediting_1451601chr21_36418690_+SINEAluAluSz
CAediting_1451602chr21_36418691_+SINEAluAluSz
CAediting_1451603chr21_36418693_+SINEAluAluSz
CAediting_1451604chr21_36418695_+SINEAluAluSz
CAediting_1451605chr21_36418696_+SINEAluAluSz
CAediting_1451606chr21_36418697_+SINEAluAluSz
CAediting_1451607chr21_36418698_+SINEAluAluSz
CAediting_1451608chr21_36418699_+SINEAluAluSz
CAediting_1451609chr21_36418702_+SINEAluAluSz
CAediting_1451610chr21_36418706_+SINEAluAluSz
CAediting_1451611chr21_36418718_+SINEAluAluSz
CAediting_1451612chr21_36418720_+SINEAluAluSz
CAediting_1451613chr21_36418722_+SINEAluAluSz
CAediting_1451614chr21_36418728_+SINEAluAluSz
CAediting_1451615chr21_36418734_+SINEAluAluSz
CAediting_1451616chr21_36418738_+SINEAluAluSz
CAediting_1451617chr21_36418751_+SINEAluAluSz
CAediting_1451618chr21_36418755_+SINEAluAluSz
CAediting_1451619chr21_36418757_+SINEAluAluSz
CAediting_1451620chr21_36418758_+SINEAluAluSz
CAediting_1451621chr21_36418761_+SINEAluAluSz
CAediting_1451622chr21_36418769_+SINEAluAluSz
CAediting_1451623chr21_36418770_+SINEAluAluSz
CAediting_1451624chr21_36418777_+SINEAluAluSz
CAediting_1451625chr21_36418783_+SINEAluAluSz
CAediting_1451626chr21_36418790_+SINEAluAluSz
CAediting_1451627chr21_36418794_+SINEAluAluSz
CAediting_1451628chr21_36418799_+SINEAluAluSz
CAediting_1451629chr21_36418814_+SINEAluAluSz
CAediting_1451630chr21_36418819_+SINEAluAluSz
CAediting_1451631chr21_36418829_+SINEAluAluSz
CAediting_1451632chr21_36418831_+SINEAluAluSz
CAediting_1451633chr21_36418837_+SINEAluAluSz
CAediting_1451634chr21_36418839_+SINEAluAluSz
CAediting_1451635chr21_36418851_+SINEAluAluSz
CAediting_1451636chr21_36418853_+SINEAluAluSz
CAediting_1451637chr21_36418856_+SINEAluAluSz

Top

RNA A-to-I editing events in the alternative splicing sites for CHAF1B

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000159259.7.CHAF1B.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000159259.7.CHAF1B.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for CHAF1B

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for CHAF1B

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CHAF1B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1451518chr21_36417091_+ENSG00000159259.7ENST00000314103hsa-miR-4433b-5p36417088364170947mer-m83641707536417095140.00-10.81
CAediting_1451526chr21_36417201_+ENSG00000159259.7ENST00000314103hsa-miR-4691-3p36417198364172047mer-m83641717936417205156.00-30.33
CAediting_1451541chr21_36417540_+ENSG00000159259.7ENST00000314103hsa-miR-3190-5p36417533364175397mer-m83641752136417540146.00-17.92
CAediting_1451541chr21_36417540_+ENSG00000159259.7ENST00000314103hsa-miR-6849-3p36417538364175447mer-m83641752536417545156.00-22.23
CAediting_1451552chr21_36417750_+ENSG00000159259.7ENST00000314103hsa-miR-365736417748364177547mer-m83641773636417755153.00-19.35
CAediting_1451552chr21_36417750_+ENSG00000159259.7ENST00000314103hsa-miR-4433a-5p36417746364177538mer-1a3641773236417753150.00-19.61
CAediting_1451552chr21_36417750_+ENSG00000159259.7ENST00000314103hsa-miR-4433b-5p36417747364177537mer-m83641773236417754154.00-20.69
CAediting_1451552chr21_36417750_+ENSG00000159259.7ENST00000314103hsa-miR-66236417745364177517mer-1a3641772936417751149.00-32.47
CAediting_1451559chr21_36418114_+ENSG00000159259.7ENST00000314103hsa-miR-331-3p36418111364181177mer-1a3641809736418117145.00-23.44
CAediting_1451559chr21_36418114_+ENSG00000159259.7ENST00000314103hsa-miR-345-3p36418109364181157mer-m83641809336418116158.00-28.60
CAediting_1451564chr21_36418179_+ENSG00000159259.7ENST00000314103hsa-miR-34a-3p36418175364181817mer-m83641816136418182140.00-8.62
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548ae-3p36418178364181847mer-m83641816536418185141.00-10.65
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548ae-3p36418178364181847mer-m83641816536418185141.00-10.65
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548ah-3p36418178364181847mer-m83641816336418185143.00-11.29
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548aj-3p36418178364181847mer-m83641816536418185141.00-8.54
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548aj-3p36418178364181847mer-m83641816536418185141.00-8.54
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548am-3p36418178364181847mer-m83641816336418185143.00-10.65
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548aq-3p36418178364181847mer-m83641816436418185141.00-10.72
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548j-3p36418178364181847mer-m83641816536418185141.00-10.65
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548x-3p36418178364181847mer-m83641816636418185141.00-8.54
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-548x-3p36418178364181847mer-m83641816636418185141.00-8.54
CAediting_1451565chr21_36418180_+ENSG00000159259.7ENST00000314103hsa-miR-7844-5p36418176364181827mer-m83641816236418183164.00-22.52
CAediting_1451570chr21_36418236_+ENSG00000159259.7ENST00000314103hsa-miR-3135b36418230364182367mer-m83641821536418237144.00-16.26
CAediting_1451571chr21_36418259_+ENSG00000159259.7ENST00000314103hsa-miR-6765-5p36418257364182637mer-m83641823736418264158.00-29.20
CAediting_1451571chr21_36418259_+ENSG00000159259.7ENST00000314103hsa-miR-7112-5p36418252364182587mer-m83641823836418259148.00-19.18
CAediting_1451574chr21_36418274_+ENSG00000159259.7ENST00000314103hsa-miR-3189-3p36418268364182747mer-m83641825636418275153.00-22.76
CAediting_1451574chr21_36418274_+ENSG00000159259.7ENST00000314103hsa-miR-6813-3p36418269364182757mer-m83641825636418276140.00-10.68
CAediting_1451575chr21_36418286_+ENSG00000159259.7ENST00000314103hsa-miR-106a-3p36418282364182876mer3641826736418288141.00-21.13
CAediting_1451577chr21_36418561_+ENSG00000159259.7ENST00000314103hsa-miR-323b-3p36418555364185617mer-m83641854236418562150.00-20.81
CAediting_1451578chr21_36418585_+ENSG00000159259.7ENST00000314103hsa-miR-446636418583364185886mer3641857236418589143.00-28.34
CAediting_1451580chr21_36418593_+ENSG00000159259.7ENST00000314103hsa-miR-513a-5p36418587364185937mer-m83641857736418594144.00-17.77
CAediting_1451580chr21_36418593_+ENSG00000159259.7ENST00000314103hsa-miR-513a-5p36418587364185937mer-m83641857736418594144.00-17.77
CAediting_1451580chr21_36418593_+ENSG00000159259.7ENST00000314103hsa-miR-63836418592364185987mer-1a3641857436418598151.00-32.73
CAediting_1451582chr21_36418599_+ENSG00000159259.7ENST00000314103hsa-miR-371a-3p36418597364186037mer-m83641858236418604145.00-16.91
CAediting_1451593chr21_36418663_+ENSG00000159259.7ENST00000314103hsa-miR-3190-5p36418656364186627mer-m83641864436418663154.00-19.64
CAediting_1451594chr21_36418665_+ENSG00000159259.7ENST00000314103hsa-miR-1306-3p36418658364186647mer-m83641864836418665152.00-23.71
CAediting_1451595chr21_36418673_+ENSG00000159259.7ENST00000314103hsa-miR-428336418670364186778mer-1a3641866036418677146.00-20.38
CAediting_1451595chr21_36418673_+ENSG00000159259.7ENST00000314103hsa-miR-428336418670364186778mer-1a3641866036418677146.00-20.38
CAediting_1451597chr21_36418684_+ENSG00000159259.7ENST00000314103hsa-miR-374b-3p36418681364186888mer-1a3641866636418688147.00-13.50
CAediting_1451597chr21_36418684_+ENSG00000159259.7ENST00000314103hsa-miR-4756-3p36418677364186837mer-m83641866236418684155.00-20.06
CAediting_1451598chr21_36418687_+ENSG00000159259.7ENST00000314103hsa-miR-222-5p36418681364186888mer-1a3641866836418688146.00-13.23
CAediting_1451598chr21_36418687_+ENSG00000159259.7ENST00000314103hsa-miR-30a-3p36418683364186908mer-1a3641866636418690154.00-12.79
CAediting_1451598chr21_36418687_+ENSG00000159259.7ENST00000314103hsa-miR-30d-3p36418683364186908mer-1a3641866836418690153.00-12.10
CAediting_1451598chr21_36418687_+ENSG00000159259.7ENST00000314103hsa-miR-30e-3p36418683364186908mer-1a3641866636418690154.00-13.76
CAediting_1451598chr21_36418687_+ENSG00000159259.7ENST00000314103hsa-miR-93636418680364186878mer-1a3641866536418687155.00-22.86
CAediting_1451599chr21_36418688_+ENSG00000159259.7ENST00000314103hsa-miR-32536418681364186888mer-1a3641866036418688147.00-16.57
CAediting_1451600chr21_36418689_+ENSG00000159259.7ENST00000314103hsa-miR-63036418687364186948mer-1a3641867436418694158.00-15.14
CAediting_1451603chr21_36418693_+ENSG00000159259.7ENST00000314103hsa-miR-153-5p36418686364186927mer-m83641867136418693148.00-8.16
CAediting_1451603chr21_36418693_+ENSG00000159259.7ENST00000314103hsa-miR-3680-3p36418690364186978mer-1a3641867536418697140.00-14.24
CAediting_1451603chr21_36418693_+ENSG00000159259.7ENST00000314103hsa-miR-3680-3p36418690364186978mer-1a3641867536418697140.00-14.24
CAediting_1451605chr21_36418696_+ENSG00000159259.7ENST00000314103hsa-miR-4742-3p36418689364186968mer-1a3641867436418696142.00-9.18
CAediting_1451606chr21_36418697_+ENSG00000159259.7ENST00000314103hsa-miR-5584-3p36418694364187018mer-1a3641868036418701146.00-8.26
CAediting_1451606chr21_36418697_+ENSG00000159259.7ENST00000314103hsa-miR-57836418692364186987mer-m83641867936418699148.00-9.31
CAediting_1451606chr21_36418697_+ENSG00000159259.7ENST00000314103hsa-miR-64336418690364186978mer-1a3641867536418697147.00-12.10
CAediting_1451607chr21_36418698_+ENSG00000159259.7ENST00000314103hsa-miR-684436418692364186987mer-m83641867836418699155.00-6.80
CAediting_1451608chr21_36418699_+ENSG00000159259.7ENST00000314103hsa-miR-208a-5p36418694364187018mer-1a3641868036418701145.00-10.64
CAediting_1451608chr21_36418699_+ENSG00000159259.7ENST00000314103hsa-miR-208b-5p36418694364187018mer-1a3641867936418701142.00-5.87
CAediting_1451608chr21_36418699_+ENSG00000159259.7ENST00000314103hsa-miR-3140-3p36418693364186997mer-m83641868036418700150.00-14.44
CAediting_1451609chr21_36418702_+ENSG00000159259.7ENST00000314103hsa-miR-3190-5p36418700364187067mer-m83641868836418707147.00-18.85
CAediting_1451609chr21_36418702_+ENSG00000159259.7ENST00000314103hsa-miR-432836418695364187017mer-m83641868636418702140.00-10.31
CAediting_1451609chr21_36418702_+ENSG00000159259.7ENST00000314103hsa-miR-443536418699364187057mer-m83641868536418706140.00-16.23
CAediting_1451609chr21_36418702_+ENSG00000159259.7ENST00000314103hsa-miR-443536418699364187057mer-m83641868536418706140.00-16.23
CAediting_1451614chr21_36418728_+ENSG00000159259.7ENST00000314103hsa-miR-125b-2-3p36418721364187288mer-1a3641870636418728147.00-18.59
CAediting_1451614chr21_36418728_+ENSG00000159259.7ENST00000314103hsa-miR-513b-5p36418722364187287mer-m83641870836418729159.00-21.13
CAediting_1451614chr21_36418728_+ENSG00000159259.7ENST00000314103hsa-miR-63836418727364187337mer-1a3641870936418733155.00-29.79
CAediting_1451616chr21_36418738_+ENSG00000159259.7ENST00000314103hsa-miR-1207-3p36418731364187377mer-m83641872136418738140.00-12.56
CAediting_1451616chr21_36418738_+ENSG00000159259.7ENST00000314103hsa-miR-64636418733364187397mer-m83641872236418740145.00-13.63
CAediting_1451620chr21_36418758_+ENSG00000159259.7ENST00000314103hsa-miR-145-3p36418756364187627mer-m83641874236418763145.00-14.27
CAediting_1451620chr21_36418758_+ENSG00000159259.7ENST00000314103hsa-miR-1914-5p36418752364187598mer-1a3641873736418759157.00-29.50
CAediting_1451620chr21_36418758_+ENSG00000159259.7ENST00000314103hsa-miR-6529-3p36418751364187577mer-m83641873736418758154.00-25.43
CAediting_1451620chr21_36418758_+ENSG00000159259.7ENST00000314103hsa-miR-6737-3p36418752364187576mer3641873836418758149.00-27.28
CAediting_1451620chr21_36418758_+ENSG00000159259.7ENST00000314103hsa-miR-7152-5p36418754364187607mer-m83641874036418761157.00-20.44
CAediting_1451621chr21_36418761_+ENSG00000159259.7ENST00000314103hsa-miR-443136418757364187637mer-m83641874336418764140.00-18.98
CAediting_1451623chr21_36418770_+ENSG00000159259.7ENST00000314103hsa-miR-443736418766364187727mer-m83641875336418773146.00-19.53
CAediting_1451624chr21_36418777_+ENSG00000159259.7ENST00000314103hsa-miR-431336418774364187796mer3641876136418780142.00-21.24
CAediting_1451624chr21_36418777_+ENSG00000159259.7ENST00000314103hsa-miR-5587-3p36418770364187767mer-m83641875636418777150.00-24.25
CAediting_1451624chr21_36418777_+ENSG00000159259.7ENST00000314103hsa-miR-6840-5p36418771364187777mer-m83641875336418778147.00-27.28
CAediting_1451627chr21_36418794_+ENSG00000159259.7ENST00000314103hsa-miR-430136418788364187947mer-m83641877736418795146.00-18.56
CAediting_1451627chr21_36418794_+ENSG00000159259.7ENST00000314103hsa-miR-4690-3p36418791364187988mer-1a3641877936418798153.00-23.61
CAediting_1451627chr21_36418794_+ENSG00000159259.7ENST00000314103hsa-miR-568536418791364187988mer-1a3641877536418798142.00-20.32
CAediting_1451628chr21_36418799_+ENSG00000159259.7ENST00000314103hsa-miR-426736418792364187987mer-m83641878436418799144.00-18.46
CAediting_1451628chr21_36418799_+ENSG00000159259.7ENST00000314103hsa-miR-797736418794364188007mer-m83641878336418801146.00-16.29
CAediting_1451629chr21_36418814_+ENSG00000159259.7ENST00000314103hsa-miR-128-3p36418807364188137mer-m83641879436418814155.00-21.47
CAediting_1451629chr21_36418814_+ENSG00000159259.7ENST00000314103hsa-miR-128-3p36418807364188137mer-m83641879436418814155.00-21.47
CAediting_1451629chr21_36418814_+ENSG00000159259.7ENST00000314103hsa-miR-216a-3p36418807364188137mer-m83641879036418814150.00-20.20
CAediting_1451629chr21_36418814_+ENSG00000159259.7ENST00000314103hsa-miR-3681-3p36418807364188137mer-m83641879036418814156.00-20.30
CAediting_1451631chr21_36418829_+ENSG00000159259.7ENST00000314103hsa-miR-4632-3p36418823364188308mer-1a3641881136418830141.00-23.59
CAediting_1451632chr21_36418831_+ENSG00000159259.7ENST00000314103hsa-miR-118136418824364188307mer-m83641881136418831142.00-22.01
CAediting_1451519chr21_36417095_+ENSG00000159259.7ENST00000314103hsa-miR-340-3p36417089364170957mer-m83641707536417096146.00-19.17
CAediting_1451519chr21_36417095_+ENSG00000159259.7ENST00000314103hsa-miR-6827-3p36417089364170957mer-m83641707636417096140.00-14.58
CAediting_1451520chr21_36417136_+ENSG00000159259.7ENST00000314103hsa-miR-2277-3p36417131364171377mer-m83641711636417138162.00-28.94
CAediting_1451520chr21_36417136_+ENSG00000159259.7ENST00000314103hsa-miR-4524a-3p36417133364171408mer-1a3641711936417140153.00-22.77
CAediting_1451523chr21_36417184_+ENSG00000159259.7ENST00000314103hsa-miR-612536417177364171837mer-m83641716536417184140.00-22.74
CAediting_1451523chr21_36417184_+ENSG00000159259.7ENST00000314103hsa-miR-6765-5p36417182364171887mer-m83641716836417189149.00-25.37
CAediting_1451525chr21_36417198_+ENSG00000159259.7ENST00000314103hsa-miR-1247-3p36417192364171987mer-m83641717836417199162.00-26.89
CAediting_1451528chr21_36417227_+ENSG00000159259.7ENST00000314103hsa-miR-56436417224364172318mer-1a3641721436417231158.00-22.06
CAediting_1451529chr21_36417312_+ENSG00000159259.7ENST00000314103hsa-miR-216b-3p36417307364173137mer-m83641729136417314140.00-10.76
CAediting_1451529chr21_36417312_+ENSG00000159259.7ENST00000314103hsa-miR-6500-3p36417305364173117mer-m83641729236417312144.00-13.30
CAediting_1451530chr21_36417383_+ENSG00000159259.7ENST00000314103hsa-miR-4793-3p36417379364173857mer-m83641736436417386153.00-23.14
CAediting_1451530chr21_36417383_+ENSG00000159259.7ENST00000314103hsa-miR-6807-3p36417381364173866mer3641736536417387164.00-32.69
CAediting_1451530chr21_36417383_+ENSG00000159259.7ENST00000314103hsa-miR-770336417378364173847mer-m83641736336417385162.00-25.89
CAediting_1451536chr21_36417471_+ENSG00000159259.7ENST00000314103hsa-miR-100-5p36417467364174737mer-m83641745436417474160.00-18.00
CAediting_1451536chr21_36417471_+ENSG00000159259.7ENST00000314103hsa-miR-99a-5p36417467364174737mer-m83641745436417474160.00-17.83
CAediting_1451536chr21_36417471_+ENSG00000159259.7ENST00000314103hsa-miR-99b-5p36417467364174737mer-m83641745436417474152.00-21.29
CAediting_1451537chr21_36417495_+ENSG00000159259.7ENST00000314103hsa-miR-34a-3p36417491364174977mer-m83641747636417498143.00-9.55
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548ae-3p36417494364175018mer-1a3641748136417501141.00-6.14
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548ae-3p36417494364175018mer-1a3641748136417501141.00-6.14
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548ah-3p36417494364175018mer-1a3641747936417501143.00-6.78
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548aj-3p36417494364175018mer-1a3641748136417501141.00-8.64
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548aj-3p36417494364175018mer-1a3641748136417501141.00-8.64
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548am-3p36417494364175018mer-1a3641747936417501143.00-6.14
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548aq-3p36417494364175018mer-1a3641748036417501141.00-6.21
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548j-3p36417494364175018mer-1a3641748136417501141.00-6.14
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548x-3p36417494364175018mer-1a3641748236417501141.00-8.64
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-548x-3p36417494364175018mer-1a3641748236417501141.00-8.64
CAediting_1451538chr21_36417496_+ENSG00000159259.7ENST00000314103hsa-miR-7844-5p36417492364174987mer-m83641747836417499164.00-21.13
CAediting_1451539chr21_36417504_+ENSG00000159259.7ENST00000314103hsa-miR-480336417499364175057mer-m83641748336417506152.00-13.17
CAediting_1451543chr21_36417590_+ENSG00000159259.7ENST00000314103hsa-miR-6771-5p36417584364175918mer-1a3641757236417591157.00-31.04
CAediting_1451544chr21_36417592_+ENSG00000159259.7ENST00000314103hsa-miR-3189-3p36417586364175927mer-m83641757436417593145.00-25.82
CAediting_1451544chr21_36417592_+ENSG00000159259.7ENST00000314103hsa-miR-6813-3p36417587364175937mer-m83641757436417594140.00-12.15
CAediting_1451547chr21_36417702_+ENSG00000159259.7ENST00000314103hsa-miR-1199-5p36417695364177017mer-m83641768336417702148.00-27.32
CAediting_1451547chr21_36417702_+ENSG00000159259.7ENST00000314103hsa-miR-6751-3p36417695364177017mer-m83641768236417702146.00-16.77
CAediting_1451549chr21_36417706_+ENSG00000159259.7ENST00000314103hsa-miR-475936417703364177097mer-m83641769036417710144.00-10.88
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-3192-5p36417721364177288mer-1a3641770736417728159.00-29.26
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-32636417723364177297mer-m83641771136417730140.00-13.25
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-330-5p36417723364177297mer-m83641770736417730141.00-19.24
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-431436417722364177287mer-m83641771136417729145.00-23.57
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36417724364177307mer-m83641771036417731146.00-18.62
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36417724364177307mer-m83641771036417731146.00-18.62
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36417724364177307mer-m83641771036417731146.00-18.62
CAediting_1451553chr21_36418038_+ENSG00000159259.7ENST00000314103hsa-miR-340-3p36418032364180398mer-1a3641801836418039142.00-15.44
CAediting_1451553chr21_36418038_+ENSG00000159259.7ENST00000314103hsa-miR-6827-3p36418032364180398mer-1a3641801936418039140.00-14.46
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-10a-5p36418035364180417mer-m83641802236418042146.00-14.12
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-10b-5p36418035364180417mer-m83641802036418042140.00-12.46
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-339-5p36418034364180407mer-m83641801936418041145.00-18.26
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-4725-5p36418036364180427mer-m83641802336418043140.00-15.96
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-504-5p36418036364180427mer-m83641802336418043146.00-17.90
CAediting_1451554chr21_36418040_+ENSG00000159259.7ENST00000314103hsa-miR-5699-3p36418033364180397mer-m83641801936418040141.00-17.20
CAediting_1451555chr21_36418054_+ENSG00000159259.7ENST00000314103hsa-miR-1273c36418049364180546mer3641803436418055152.00-32.53
CAediting_1451555chr21_36418054_+ENSG00000159259.7ENST00000314103hsa-miR-1285-3p36418053364180586mer3641803836418059156.00-31.39
CAediting_1451555chr21_36418054_+ENSG00000159259.7ENST00000314103hsa-miR-1285-3p36418053364180586mer3641803836418059156.00-31.39
CAediting_1451555chr21_36418054_+ENSG00000159259.7ENST00000314103hsa-miR-448636418052364180587mer-m83641804336418059145.00-18.64
CAediting_1451557chr21_36418107_+ENSG00000159259.7ENST00000314103hsa-miR-66536418101364181077mer-m83641809036418108161.00-27.35
CAediting_1451557chr21_36418107_+ENSG00000159259.7ENST00000314103hsa-miR-6840-3p36418102364181087mer-m83641808536418109143.00-22.25
CAediting_1451560chr21_36418143_+ENSG00000159259.7ENST00000314103hsa-miR-425236418138364181447mer-m83641812636418145141.00-16.51
CAediting_1451560chr21_36418143_+ENSG00000159259.7ENST00000314103hsa-miR-4691-3p36418140364181467mer-m83641812636418147152.00-28.08
CAediting_1451563chr21_36418169_+ENSG00000159259.7ENST00000314103hsa-miR-10394-3p36418167364181737mer-m83641814736418174150.00-33.76
CAediting_1451563chr21_36418169_+ENSG00000159259.7ENST00000314103hsa-miR-317836418167364181737mer-m83641815636418174146.00-24.23
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-32636418268364182747mer-m83641825636418275140.00-13.25
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-330-5p36418268364182747mer-m83641825236418275141.00-19.74
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-431436418267364182737mer-m83641825636418274141.00-20.85
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36418269364182757mer-m83641825336418276150.00-18.62
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36418269364182757mer-m83641825336418276150.00-18.62
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-514a-5p36418269364182757mer-m83641825336418276150.00-18.62
CAediting_1451576chr21_36418295_+ENSG00000159259.7ENST00000314103hsa-miR-66236418290364182956mer3641827436418296153.00-32.51
CAediting_1451576chr21_36418295_+ENSG00000159259.7ENST00000314103hsa-miR-663b36418293364182997mer-m83641827736418300149.00-31.22
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518a-3p36418599364186057mer-m83641858536418606145.00-17.16
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518a-3p36418599364186057mer-m83641858536418606145.00-17.16
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518b36418599364186057mer-m83641858636418606146.00-21.80
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518c-3p36418599364186057mer-m83641858436418606146.00-21.31
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518d-3p36418599364186057mer-m83641858636418606145.00-17.84
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518e-3p36418598364186047mer-m83641858436418605144.00-19.12
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-518f-3p36418599364186057mer-m83641858636418606145.00-17.49
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-526a-3p36418599364186057mer-m83641858636418606146.00-17.72
CAediting_1451586chr21_36418616_+ENSG00000159259.7ENST00000314103hsa-miR-317636418609364186157mer-m83641859836418616140.00-15.24
CAediting_1451586chr21_36418616_+ENSG00000159259.7ENST00000314103hsa-miR-3620-3p36418613364186197mer-m83641859836418620156.00-24.24
CAediting_1451586chr21_36418616_+ENSG00000159259.7ENST00000314103hsa-miR-3922-3p36418609364186157mer-m83641859536418616141.00-19.73
CAediting_1451589chr21_36418642_+ENSG00000159259.7ENST00000314103hsa-miR-6771-3p36418639364186457mer-m83641862636418646147.00-20.99
CAediting_1451589chr21_36418642_+ENSG00000159259.7ENST00000314103hsa-miR-6793-3p36418635364186417mer-m83641862336418642147.00-20.67
CAediting_1451590chr21_36418650_+ENSG00000159259.7ENST00000314103hsa-miR-317636418647364186537mer-m83641863636418654161.00-24.88
CAediting_1451590chr21_36418650_+ENSG00000159259.7ENST00000314103hsa-miR-3922-3p36418647364186537mer-m83641863336418654150.00-19.36
CAediting_1451590chr21_36418650_+ENSG00000159259.7ENST00000314103hsa-miR-6878-3p36418646364186527mer-m83641863136418653146.00-27.37
CAediting_1451596chr21_36418678_+ENSG00000159259.7ENST00000314103hsa-miR-483-5p36418674364186807mer-m83641866036418681140.00-14.01
CAediting_1451617chr21_36418751_+ENSG00000159259.7ENST00000314103hsa-miR-6849-3p36418744364187507mer-m83641873036418751140.00-15.93
CAediting_1451618chr21_36418755_+ENSG00000159259.7ENST00000314103hsa-miR-668-5p36418749364187568mer-1a3641873836418756146.00-22.88
CAediting_1451625chr21_36418783_+ENSG00000159259.7ENST00000314103hsa-miR-6771-3p36418780364187867mer-m83641876936418787158.00-30.08
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-197-3p36418787364187937mer-m83641877336418794158.00-24.63
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511a-3p36418788364187947mer-m83641877436418795164.00-26.13
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511a-3p36418788364187947mer-m83641877436418795164.00-26.13
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511a-3p36418788364187947mer-m83641877436418795164.00-26.13
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511a-3p36418788364187947mer-m83641877436418795164.00-26.13
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511b-3p36418788364187947mer-m83641877336418795168.00-29.94
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6511b-3p36418788364187947mer-m83641877336418795168.00-29.94
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-6784-3p36418789364187946mer3641877336418795147.00-31.08
CAediting_1451630chr21_36418819_+ENSG00000159259.7ENST00000314103hsa-miR-197236418818364188236mer3641880236418824146.00-32.40
CAediting_1451630chr21_36418819_+ENSG00000159259.7ENST00000314103hsa-miR-197236418818364188236mer3641880236418824146.00-32.40
CAediting_1451630chr21_36418819_+ENSG00000159259.7ENST00000314103hsa-miR-4743-5p36418815364188217mer-m83641880336418822152.00-28.17
CAediting_1451634chr21_36418839_+ENSG00000159259.7ENST00000314103hsa-miR-2114-3p36418835364188417mer-m83641882236418842140.00-11.85
CAediting_1451634chr21_36418839_+ENSG00000159259.7ENST00000314103hsa-miR-6823-3p36418835364188417mer-m83641882036418842152.00-22.94
CAediting_1451635chr21_36418851_+ENSG00000159259.7ENST00000314103hsa-miR-526b-5p36418845364188528mer-1a3641882836418852155.00-18.07
CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-476736418157364181637mer-m83641814236418164153.00-26.31
CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-6499-5p36418156364181627mer-m83641814036418163142.00-20.92
CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-6720-3p36418153364181597mer-m83641813936418160148.00-18.90
CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-989936418155364181617mer-m83641814036418162154.00-30.06

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1451529chr21_36417312_+ENSG00000159259.7ENST00000314103hsa-miR-1-5p36417307364173137mer-m83641729336417314153-8.49
CAediting_1451580chr21_36418593_+ENSG00000159259.7ENST00000314103hsa-miR-10399-5p36418588364185947mer-m83641857436418595148-10
CAediting_1451581chr21_36418594_+ENSG00000159259.7ENST00000314103hsa-miR-10399-5p36418588364185947mer-m83641857436418595148-10
CAediting_1451614chr21_36418728_+ENSG00000159259.7ENST00000314103hsa-miR-10399-5p36418724364187296mer3641870936418730140-10.94
CAediting_1451519chr21_36417095_+ENSG00000159259.7ENST00000314103hsa-miR-10a-5p36417092364170987mer-m83641707936417099142-12.31
CAediting_1451519chr21_36417095_+ENSG00000159259.7ENST00000314103hsa-miR-10b-5p36417092364170987mer-m83641707336417099148-13.01
CAediting_1451523chr21_36417184_+ENSG00000159259.7ENST00000314103hsa-miR-1211436417180364171867mer-m83641716936417187149-17.44
CAediting_1451542chr21_36417564_+ENSG00000159259.7ENST00000314103hsa-miR-1211936417559364175657mer-m83641754036417566151-21.43
CAediting_1451570chr21_36418236_+ENSG00000159259.7ENST00000314103hsa-miR-1213136418229364182357mer-m83641821736418236140-11.8
CAediting_1451611chr21_36418718_+ENSG00000159259.7ENST00000314103hsa-miR-1227-3p36418712364187198mer-1a3641870036418719145-15.95
CAediting_1451587chr21_36418629_+ENSG00000159259.7ENST00000314103hsa-miR-1245a36418624364186307mer-m83641861136418631153-19.08
CAediting_1451555chr21_36418054_+ENSG00000159259.7ENST00000314103hsa-miR-126236418051364180577mer-m83641803736418058140-15.41
CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-1271-3p36418153364181597mer-m83641814136418160155-21.49
CAediting_1451624chr21_36418777_+ENSG00000159259.7ENST00000314103hsa-miR-128136418774364187807mer-m83641876536418781141-16.88
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-128336418784364187907mer-m83641877036418791140-16.53
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-128336418784364187907mer-m83641877036418791140-16.53
CAediting_1451626chr21_36418790_+ENSG00000159259.7ENST00000314103hsa-miR-1304-3p36418789364187946mer3641877436418795143-20.86
CAediting_1451627chr21_36418794_+ENSG00000159259.7ENST00000314103hsa-miR-1304-3p36418789364187946mer3641877436418795143-20.86
CAediting_1451584chr21_36418610_+ENSG00000159259.7ENST00000314103hsa-miR-150-5p36418604364186107mer-m83641859036418611140-15.8
CAediting_1451589chr21_36418642_+ENSG00000159259.7ENST00000314103hsa-miR-150-5p36418636364186427mer-m83641861936418643152-23.78
CAediting_1451522chr21_36417151_+ENSG00000159259.7ENST00000314103hsa-miR-17-3p36417145364171517mer-m83641713136417152150-18.51
CAediting_1451595chr21_36418673_+ENSG00000159259.7ENST00000314103hsa-miR-23a-5p36418669364186757mer-m83641865436418676144-21.43
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-302a-3p36418598364186047mer-m83641858436418605147-15.45
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-302b-3p36418598364186047mer-m83641857836418605144-10.15
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-302c-3p36418598364186047mer-m83641858536418605145-11.96
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-302d-3p36418598364186047mer-m83641857836418605152-14.53
CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-302e36418598364186047mer-m83641858936418605141-8.62
CAediting_1451609chr21_36418702_+ENSG00000159259.7ENST00000314103hsa-miR-3064-5p36418701364187066mer3641868636418707140-18.16
CAediting_1451610chr21_36418706_+ENSG00000159259.7ENST00000314103hsa-miR-3064-5p36418701364187066mer3641868636418707140-18.16
CAediting_1451543chr21_36417590_+ENSG00000159259.7ENST00000314103hsa-miR-30b-3p36417583364175908mer-1a3641756936417590151-17.42
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CAediting_1451583chr21_36418602_+ENSG00000159259.7ENST00000314103hsa-miR-520g-3p36418600364186067mer-m83641858436418607151-19.1
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CAediting_1451571chr21_36418259_+ENSG00000159259.7ENST00000314103hsa-miR-541-3p36418254364182607mer-m83641824036418261151-19.9
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CAediting_1451562chr21_36418159_+ENSG00000159259.7ENST00000314103hsa-miR-550a-5p36418153364181597mer-m83641813836418160140-18.24
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CAediting_1451619chr21_36418757_+ENSG00000159259.7ENST00000314103hsa-miR-550b-2-5p36418750364187578mer-1a3641873636418757147-17.13
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CAediting_1451584chr21_36418610_+ENSG00000159259.7ENST00000314103hsa-miR-6778-3p36418606364186127mer-m83641859336418613143-13.97
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CAediting_1451624chr21_36418777_+ENSG00000159259.7ENST00000314103hsa-miR-6791-3p36418774364187796mer3641876136418780145-24.72
CAediting_1451578chr21_36418585_+ENSG00000159259.7ENST00000314103hsa-miR-6807-5p36418578364185847mer-m83641856336418585147-19.42
CAediting_1451597chr21_36418684_+ENSG00000159259.7ENST00000314103hsa-miR-6832-5p36418678364186847mer-m83641866336418685142-15.43
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CAediting_1451590chr21_36418650_+ENSG00000159259.7ENST00000314103hsa-miR-6848-3p36418646364186527mer-m83641863636418653147-20.74
CAediting_1451591chr21_36418653_+ENSG00000159259.7ENST00000314103hsa-miR-6848-3p36418646364186527mer-m83641863636418653147-20.74
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CAediting_1451572chr21_36418264_+ENSG00000159259.7ENST00000314103hsa-miR-7160-5p36418259364182657mer-m83641824836418266154-21.55
CAediting_1451524chr21_36417189_+ENSG00000159259.7ENST00000314103hsa-miR-7160-5p36417184364171907mer-m83641717136417191146-20.53
CAediting_1451542chr21_36417564_+ENSG00000159259.7ENST00000314103hsa-miR-7162-3p36417558364175658mer-1a3641754536417565142-17.81
CAediting_1451572chr21_36418264_+ENSG00000159259.7ENST00000314103hsa-miR-7162-3p36418258364182647mer-m83641824836418265153-22.62
CAediting_1451587chr21_36418629_+ENSG00000159259.7ENST00000314103hsa-miR-807936418624364186307mer-m83641861236418631149-14.8
CAediting_1451543chr21_36417590_+ENSG00000159259.7ENST00000314103hsa-miR-887-5p36417584364175918mer-1a3641757036417591150-16.01
CAediting_1451550chr21_36417728_+ENSG00000159259.7ENST00000314103hsa-miR-887-5p36417721364177288mer-1a3641770836417728145-13.23
CAediting_1451573chr21_36418273_+ENSG00000159259.7ENST00000314103hsa-miR-887-5p36418266364182738mer-1a3641825436418273143-13.53
CAediting_1451531chr21_36417404_+ENSG00000159259.7ENST00000314103hsa-miR-92136417400364174067mer-m83641738036417407142-12.74
CAediting_1451633chr21_36418837_+ENSG00000159259.7ENST00000314103hsa-miR-92436418836364188416mer3641882336418842144-22.22
CAediting_1451634chr21_36418839_+ENSG00000159259.7ENST00000314103hsa-miR-92436418836364188416mer3641882336418842144-22.22

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_117844chr1_162342605_+ENSG00000159259.7ENST00000314103hsa-miR-556-3p36418990364189978mer-1a3641897636418997147-8.73
CAediting_442554chr5_154685830_+ENSG00000159259.7ENST00000314103hsa-miR-130336418229364182357mer-m83641821636418236154-17.8
CAediting_524911chr7_5495852_-ENSG00000159259.7ENST00000314103hsa-miR-589-3p36417101364171077mer-m83641708536417108158-17.61
CAediting_573001chr7_92204086_-ENSG00000159259.7ENST00000314103hsa-miR-1285-5p36417746364177538mer-1a3641773136417753157-26.17

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_442554chr5_154685830_+ENSG00000159259.7ENST00000314103hsa-miR-130336417545364175517mer-m83641753336417552155-16.23
CAediting_846604chr11_93733708_-ENSG00000159259.7ENST00000314103hsa-miR-1304-3p36418789364187946mer3641877436418795143-20.86
CAediting_846604chr11_93733708_-ENSG00000159259.7ENST00000314103hsa-miR-1304-3p36416647364166537mer-m83641663436416654145-15.03
CAediting_393chr1_1167164_+ENSG00000159259.7ENST00000314103hsa-miR-200b-3p36418553364185608mer-1a3641853736418560142-14.97
CAediting_393chr1_1167164_+ENSG00000159259.7ENST00000314103hsa-miR-200b-3p36418877364188848mer-1a3641886336418884140-9.58
CAediting_1368054chr19_46709310_-ENSG00000159259.7ENST00000314103hsa-miR-320e36417187364171926mer3641717736417193142-20.18
CAediting_604450chr7_133034877_-ENSG00000159259.7ENST00000314103hsa-miR-365436418136364181427mer-1a3641812436418142145-23.78
CAediting_688080chr9_63819626_+ENSG00000159259.7ENST00000314103hsa-miR-4477b36418968364189758mer-1a3641895336418975144-10.4
CAediting_1229414chr17_67471546_+ENSG00000159259.7ENST00000314103hsa-miR-548aa36417050364170567mer-m83641703436417057144-9.14
CAediting_524911chr7_5495852_-ENSG00000159259.7ENST00000314103hsa-miR-589-3p36417985364179917mer-m83641797136417992153-23.35
CAediting_580943chr7_100356700_+ENSG00000159259.7ENST00000314103hsa-miR-6840-3p36417418364174247mer-m83641740936417425141-25.22
CAediting_580943chr7_100356700_+ENSG00000159259.7ENST00000314103hsa-miR-6840-3p36417689364176957mer-m83641767536417696155-21.03
CAediting_580943chr7_100356700_+ENSG00000159259.7ENST00000314103hsa-miR-6840-3p36417160364171667mer-m83641714636417167147-27.35

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CHAF1B

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CHAF1B

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_1451559chr21_36418114_+....0.03290905069685360.231649781839228
CESCCAediting_1451559chr21_36418114_+..0.0133117378427020.331875324872212..
BRCACAediting_1451578chr21_36418585_+2.35582359957163e-050.446235436398549....
CESCCAediting_1451578chr21_36418585_+8.67527450152574e-050.448740976587053....
BLCACAediting_1451579chr21_36418587_+0.0003929380671423750.38014067505479....
BRCACAediting_1451579chr21_36418587_+1.75524194531852e-130.50593999383283....
CESCCAediting_1451579chr21_36418587_+2.68734498109538e-070.390984419124003....
UCECCAediting_1451579chr21_36418587_+2.96833293586485e-050.414487118441491....
SKCMCAediting_1451579chr21_36418587_+2.36545715952703e-060.464792279726158....
SARCCAediting_1451579chr21_36418587_+0.001223411145615440.4109748802611130.009801749434292080.333686919275825..
TGCTCAediting_1451579chr21_36418587_+7.28182318244838e-050.492993525867971....
BRCACAediting_1451580chr21_36418593_+9.76651118805388e-080.476192211607902....
CESCCAediting_1451580chr21_36418593_+6.18055652884726e-070.507359609066028....
SKCMCAediting_1451580chr21_36418593_+0.0215417131232360.324396415409243....
BRCACAediting_1451581chr21_36418594_+1.82456176520467e-050.420235478426205....
CESCCAediting_1451581chr21_36418594_+0.001092371584897920.405043944701792....
BRCACAediting_1451593chr21_36418663_+0.008429782768116390.319371738167586....
BRCACAediting_1451597chr21_36418684_+0.03103024636576740.276448266587975....
BRCACAediting_1451598chr21_36418687_+1.47050398654101e-050.461190853041911....
CESCCAediting_1451598chr21_36418687_+0.01110210275816130.269532257759072....
BRCACAediting_1451599chr21_36418688_+3.20273612098828e-050.521374416555242....
CESCCAediting_1451600chr21_36418689_+0.01417842830242840.315158346929376....
BRCACAediting_1451609chr21_36418702_+0.000809895991467990.4423815339675350.007826311670678670.358194928236104..
CESCCAediting_1451609chr21_36418702_+0.008257693180949820.335276396397981....
BRCACAediting_1451610chr21_36418706_+0.0003405404065540740.405313838443412....
BRCACAediting_1451616chr21_36418738_+0.0002320912034557810.489320512471602....
CESCCAediting_1451616chr21_36418738_+0.01011118988423490.319328907955495....
BRCACAediting_1451620chr21_36418758_+8.08121904736774e-050.351952044506418....
CESCCAediting_1451620chr21_36418758_+6.29490843339175e-060.453668336517549....
UCECCAediting_1451620chr21_36418758_+0.00807708289747410.341711722823384....
BRCACAediting_1451622chr21_36418769_+0.0009400092492833430.339223716858077....
CESCCAediting_1451622chr21_36418769_+0.003134913727424790.300049182345121....
BRCACAediting_1451629chr21_36418814_+0.001438280951967820.368701169001963....
CESCCAediting_1451629chr21_36418814_+0.001312356430173670.3469397137088....

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Relation with cancer stages for CHAF1B

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_1451527chr21_36417217_+0.0371247618603876-0.241170191716641
BRCApathologic_stageCAediting_1451598chr21_36418687_+0.00209857600953105-0.336951836051931
BRCApathologic_stageCAediting_1451610chr21_36418706_+0.0101399825004125-0.299153158861289
CESCclinical_stageCAediting_1451609chr21_36418702_+0.02637884186756180.291557557520324
ESCAclinical_stageCAediting_1451526chr21_36417201_+0.02460963290326-0.409546898062504
TGCTclinical_stageCAediting_1451579chr21_36418587_+0.000198157661941833-0.588871062387164
TGCTpathologic_stageCAediting_1451579chr21_36418587_+7.1061809027702e-05-0.643465301562194

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Relation with survival for CHAF1B

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
BRCACAediting_1451620chr21_36418758_+0.03322154978487170.003742780.000446623
STADCAediting_1451521chr21_36417146_+0.004787197175297410.00776704113.032
ESCACAediting_1451526chr21_36417201_+0.001942079645402830.02073520.0136092

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RelatedDrugs for CHAF1B

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CHAF1B

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
CHAF1BC0026636Mouth Diseases1CTD_human
CHAF1BC2239176Liver carcinoma1CTD_human