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Editing gene: QTRT1 (CAeditome ID:81890)

Gene summary for QTRT1

Gene summary

Gene information	Gene symbol	QTRT1
	Gene ID	81890
	Gene name	queuine tRNA-ribosyltransferase catalytic subunit 1
	Synonyms	FP3235\|TGT\|TGUT
	Cytomap	19p13.2
	Type of gene	protein-coding
	Description	queuine tRNA-ribosyltransferase catalytic subunit 1TGT, 43-KD subunitTGT, catalytic subunitguanine insertion enzymequeuine tRNA-ribosyltransferase 1tRNA-guanine transglycosylase
	Modification date	20210518
	UniProtAcc	Q9BXR0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
QTRT1	GO:0008479	Queuine tRNA-ribosyltransferase catalytic subunit 1	20354154
QTRT1	GO:0042803	Queuine tRNA-ribosyltransferase catalytic subunit 1	20354154
QTRT1	GO:0046982	Queuine tRNA-ribosyltransferase catalytic subunit 1	20354154
QTRT1	GO:0101030	Queuine tRNA-ribosyltransferase catalytic subunit 1	20354154

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RNA A-to-I events for QTRT1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213339.7

RNA A-to-I editing events in Cancer.

CAediting_1292544(10702566, +), CAediting_1292545(10703262, +), CAediting_1292546(10707861, +), CAediting_1292547(10707889, +), CAediting_1292548(10707966, +), CAediting_1292549(10708012, +), CAediting_1292550(10708082, +), CAediting_1292551(10708094, +), CAediting_1292552(10708110, +), CAediting_1292553(10708162, +), CAediting_1292554(10708165, +), CAediting_1292555(10708174, +), CAediting_1292556(10708185, +), CAediting_1292557(10708223, +), CAediting_1292558(10708224, +), CAediting_1292559(10708225, +), CAediting_1292560(10708237, +), CAediting_1292561(10708239, +), CAediting_1292562(10708255, +), CAediting_1292563(10708291, +), CAediting_1292564(10708328, +), CAediting_1292565(10708329, +), CAediting_1292566(10708334, +), CAediting_1292567(10708339, +), CAediting_1292568(10708345, +), CAediting_1292569(10708359, +), CAediting_1292570(10708360, +), CAediting_1292571(10708374, +), CAediting_1292572(10708865, +), CAediting_1292573(10708866, +), CAediting_1292574(10708883, +), CAediting_1292575(10708905, +), CAediting_1292576(10708911, +), CAediting_1292577(10708940, +), CAediting_1292578(10708946, +), CAediting_1292579(10708949, +), CAediting_1292580(10708955, +), CAediting_1292581(10708966, +), CAediting_1292582(10709007, +), CAediting_1292583(10709025, +), CAediting_1292584(10709039, +), CAediting_1292585(10709041, +), CAediting_1292586(10709057, +), CAediting_1292587(10709323, +), CAediting_1292588(10709326, +), CAediting_1292589(10709328, +), CAediting_1292590(10709333, +), CAediting_1292591(10709335, +), CAediting_1292592(10709341, +), CAediting_1292593(10709346, +), CAediting_1292594(10709354, +), CAediting_1292595(10709362, +), CAediting_1292596(10709363, +), CAediting_1292597(10709368, +), CAediting_1292598(10709400, +), CAediting_1292599(10709436, +), CAediting_1292600(10709440, +), CAediting_1292601(10709458, +), CAediting_1292602(10709459, +), CAediting_1292603(10709481, +), CAediting_1292604(10709489, +), CAediting_1292605(10709494, +), CAediting_1292606(10709502, +), CAediting_1292607(10709533, +), CAediting_1292608(10709534, +), CAediting_1292609(10709536, +), CAediting_1292610(10709554, +), CAediting_1292611(10709556, +), CAediting_1292612(10709561, +), CAediting_1292613(10709562, +), CAediting_1292614(10709565, +), CAediting_1292615(10709592, +), CAediting_1292616(10709593, +), CAediting_1292617(10709615, +), CAediting_1292618(10709623, +), CAediting_1292619(10709624, +), CAediting_1292620(10709625, +), CAediting_1292621(10709652, +), CAediting_1292622(10709661, +), CAediting_1292623(10709685, +), CAediting_1292624(10709698, +), CAediting_1292625(10709702, +), CAediting_1292626(10709728, +), CAediting_1292627(10709769, +), CAediting_1292628(10709832, +), CAediting_1292629(10709864, +), CAediting_1292630(10709884, +), CAediting_1292631(10709890, +), CAediting_1292632(10709891, +), CAediting_1292633(10709926, +), CAediting_1292634(10709931, +), CAediting_1292635(10709950, +), CAediting_1292636(10709993, +), CAediting_1292637(10709998, +), CAediting_1292638(10709999, +), CAediting_1292639(10710029, +), CAediting_1292640(10710035, +), CAediting_1292641(10710087, +), CAediting_1292642(10710105, +), CAediting_1292643(10710110, +), CAediting_1292644(10710126, +), CAediting_1292645(10710134, +), CAediting_1292646(10710140, +), CAediting_1292647(10710164, +), CAediting_1292648(10710169, +), CAediting_1292649(10710199, +), CAediting_1292650(10710372, +), CAediting_1292651(10710381, +), CAediting_1292652(10710446, +), CAediting_1292653(10710456, +), CAediting_1292654(10710658, +), CAediting_1292655(10710666, +), CAediting_1292656(10710667, +), CAediting_1292657(10710707, +), CAediting_1292658(10710712, +), CAediting_1292659(10710720, +), CAediting_1292660(10710721, +), CAediting_1292661(10710736, +), CAediting_1292662(10710738, +), CAediting_1292663(10710757, +), CAediting_1292664(10710760, +), CAediting_1292665(10710761, +), CAediting_1292666(10710762, +), CAediting_1292667(10710763, +), CAediting_1292668(10710764, +), CAediting_1292669(10710766, +), CAediting_1292670(10710768, +), CAediting_1292671(10710769, +), CAediting_1292672(10710772, +), CAediting_1292673(10710776, +), CAediting_1292674(10710784, +), CAediting_1292675(10710802, +), CAediting_1292676(10710808, +), CAediting_1292677(10710812, +), CAediting_1292678(10710825, +), CAediting_1292679(10710829, +), CAediting_1292680(10710838, +), CAediting_1292681(10710872, +), CAediting_1292682(10710873, +), CAediting_1292683(10710905, +), CAediting_1292684(10710906, +), CAediting_1292685(10710911, +), CAediting_1292686(10710912, +), CAediting_1292687(10710914, +), CAediting_1292688(10711193, +), CAediting_1292689(10711246, +), CAediting_1292690(10711272, +), CAediting_1292691(10711289, +), CAediting_1292692(10711301, +), CAediting_1292693(10711338, +), CAediting_1292694(10711346, +), CAediting_1292695(10711353, +), CAediting_1292696(10711356, +), CAediting_1292697(10711362, +), CAediting_1292698(10711382, +), CAediting_1292699(10711395, +), CAediting_1292700(10711409, +), CAediting_1292701(10711410, +), CAediting_1292702(10711433, +), CAediting_1292703(10711447, +), CAediting_1292704(10711451, +), CAediting_1292705(10711536, +), CAediting_1292706(10711561, +), CAediting_1292707(10711562, +), CAediting_1292708(10711566, +), CAediting_1292709(10711579, +), CAediting_1292710(10711591, +), CAediting_1292711(10711601, +), CAediting_1292712(10711602, +), CAediting_1292713(10711603, +), CAediting_1292714(10711634, +), CAediting_1292715(10711636, +), CAediting_1292716(10711642, +), CAediting_1292717(10711645, +), CAediting_1292718(10711659, +), CAediting_1292719(10711662, +), CAediting_1292720(10711683, +), CAediting_1292721(10711684, +), CAediting_1292722(10711696, +), CAediting_1292723(10711697, +), CAediting_1292724(10711722, +), CAediting_1292725(10711724, +), CAediting_1292726(10711733, +),

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RNA editing positional annotations for QTRT1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1292544	chr19_10702566_+	ncRNA_intronic
CAediting_1292545	chr19_10703262_+	ncRNA_intronic
CAediting_1292546	chr19_10707861_+	ncRNA_intronic
CAediting_1292547	chr19_10707889_+	ncRNA_intronic
CAediting_1292548	chr19_10707966_+	ncRNA_intronic
CAediting_1292549	chr19_10708012_+	ncRNA_intronic
CAediting_1292550	chr19_10708082_+	ncRNA_intronic
CAediting_1292551	chr19_10708094_+	ncRNA_intronic
CAediting_1292552	chr19_10708110_+	ncRNA_intronic
CAediting_1292553	chr19_10708162_+	ncRNA_intronic
CAediting_1292554	chr19_10708165_+	ncRNA_intronic
CAediting_1292555	chr19_10708174_+	ncRNA_intronic
CAediting_1292556	chr19_10708185_+	ncRNA_intronic
CAediting_1292557	chr19_10708223_+	ncRNA_intronic
CAediting_1292558	chr19_10708224_+	ncRNA_intronic
CAediting_1292559	chr19_10708225_+	ncRNA_intronic
CAediting_1292560	chr19_10708237_+	ncRNA_intronic
CAediting_1292561	chr19_10708239_+	ncRNA_intronic
CAediting_1292562	chr19_10708255_+	ncRNA_intronic
CAediting_1292563	chr19_10708291_+	ncRNA_intronic
CAediting_1292564	chr19_10708328_+	ncRNA_intronic
CAediting_1292565	chr19_10708329_+	ncRNA_intronic
CAediting_1292566	chr19_10708334_+	ncRNA_intronic
CAediting_1292567	chr19_10708339_+	ncRNA_intronic
CAediting_1292568	chr19_10708345_+	ncRNA_intronic
CAediting_1292569	chr19_10708359_+	ncRNA_intronic
CAediting_1292570	chr19_10708360_+	ncRNA_intronic
CAediting_1292571	chr19_10708374_+	ncRNA_intronic
CAediting_1292572	chr19_10708865_+	ncRNA_intronic
CAediting_1292573	chr19_10708866_+	ncRNA_intronic
CAediting_1292574	chr19_10708883_+	ncRNA_intronic
CAediting_1292575	chr19_10708905_+	ncRNA_intronic
CAediting_1292576	chr19_10708911_+	ncRNA_intronic
CAediting_1292577	chr19_10708940_+	ncRNA_intronic
CAediting_1292578	chr19_10708946_+	ncRNA_intronic
CAediting_1292579	chr19_10708949_+	ncRNA_splicing
CAediting_1292580	chr19_10708955_+	ncRNA_exonic
CAediting_1292581	chr19_10708966_+	ncRNA_exonic
CAediting_1292582	chr19_10709007_+	ncRNA_exonic
CAediting_1292583	chr19_10709025_+	ncRNA_exonic
CAediting_1292584	chr19_10709039_+	ncRNA_exonic
CAediting_1292585	chr19_10709041_+	ncRNA_exonic
CAediting_1292586	chr19_10709057_+	ncRNA_exonic
CAediting_1292587	chr19_10709323_+	exonic
CAediting_1292588	chr19_10709326_+	exonic
CAediting_1292589	chr19_10709328_+	exonic
CAediting_1292590	chr19_10709333_+	exonic
CAediting_1292591	chr19_10709335_+	exonic
CAediting_1292592	chr19_10709341_+	exonic
CAediting_1292593	chr19_10709346_+	exonic
CAediting_1292594	chr19_10709354_+	exonic
CAediting_1292595	chr19_10709362_+	exonic
CAediting_1292596	chr19_10709363_+	exonic
CAediting_1292597	chr19_10709368_+	ncRNA_intronic
CAediting_1292598	chr19_10709400_+	ncRNA_intronic
CAediting_1292599	chr19_10709436_+	ncRNA_intronic
CAediting_1292600	chr19_10709440_+	ncRNA_intronic
CAediting_1292601	chr19_10709458_+	ncRNA_intronic
CAediting_1292602	chr19_10709459_+	ncRNA_intronic
CAediting_1292603	chr19_10709481_+	ncRNA_intronic
CAediting_1292604	chr19_10709489_+	ncRNA_intronic
CAediting_1292605	chr19_10709494_+	ncRNA_intronic
CAediting_1292606	chr19_10709502_+	ncRNA_intronic
CAediting_1292607	chr19_10709533_+	ncRNA_intronic
CAediting_1292608	chr19_10709534_+	ncRNA_intronic
CAediting_1292609	chr19_10709536_+	ncRNA_intronic
CAediting_1292610	chr19_10709554_+	ncRNA_intronic
CAediting_1292611	chr19_10709556_+	ncRNA_intronic
CAediting_1292612	chr19_10709561_+	ncRNA_intronic
CAediting_1292613	chr19_10709562_+	ncRNA_intronic
CAediting_1292614	chr19_10709565_+	ncRNA_intronic
CAediting_1292615	chr19_10709592_+	ncRNA_intronic
CAediting_1292616	chr19_10709593_+	ncRNA_intronic
CAediting_1292617	chr19_10709615_+	ncRNA_intronic
CAediting_1292618	chr19_10709623_+	ncRNA_intronic
CAediting_1292619	chr19_10709624_+	ncRNA_intronic
CAediting_1292620	chr19_10709625_+	ncRNA_intronic
CAediting_1292621	chr19_10709652_+	ncRNA_intronic
CAediting_1292622	chr19_10709661_+	ncRNA_intronic
CAediting_1292623	chr19_10709685_+	ncRNA_intronic
CAediting_1292624	chr19_10709698_+	ncRNA_intronic
CAediting_1292625	chr19_10709702_+	ncRNA_intronic
CAediting_1292626	chr19_10709728_+	ncRNA_intronic
CAediting_1292627	chr19_10709769_+	ncRNA_intronic
CAediting_1292628	chr19_10709832_+	ncRNA_intronic
CAediting_1292629	chr19_10709864_+	ncRNA_intronic
CAediting_1292630	chr19_10709884_+	ncRNA_intronic
CAediting_1292631	chr19_10709890_+	ncRNA_intronic
CAediting_1292632	chr19_10709891_+	ncRNA_intronic
CAediting_1292633	chr19_10709926_+	ncRNA_intronic
CAediting_1292634	chr19_10709931_+	ncRNA_intronic
CAediting_1292635	chr19_10709950_+	ncRNA_intronic
CAediting_1292636	chr19_10709993_+	ncRNA_intronic
CAediting_1292637	chr19_10709998_+	ncRNA_intronic
CAediting_1292638	chr19_10709999_+	ncRNA_intronic
CAediting_1292639	chr19_10710029_+	ncRNA_intronic
CAediting_1292640	chr19_10710035_+	ncRNA_intronic
CAediting_1292641	chr19_10710087_+	ncRNA_intronic
CAediting_1292642	chr19_10710105_+	ncRNA_intronic
CAediting_1292643	chr19_10710110_+	ncRNA_intronic
CAediting_1292644	chr19_10710126_+	ncRNA_intronic
CAediting_1292645	chr19_10710134_+	ncRNA_intronic
CAediting_1292646	chr19_10710140_+	ncRNA_intronic
CAediting_1292647	chr19_10710164_+	ncRNA_intronic
CAediting_1292648	chr19_10710169_+	ncRNA_intronic
CAediting_1292649	chr19_10710199_+	ncRNA_intronic
CAediting_1292650	chr19_10710372_+	ncRNA_intronic
CAediting_1292651	chr19_10710381_+	ncRNA_intronic
CAediting_1292652	chr19_10710446_+	ncRNA_intronic
CAediting_1292653	chr19_10710456_+	ncRNA_intronic
CAediting_1292654	chr19_10710658_+	ncRNA_intronic
CAediting_1292655	chr19_10710666_+	ncRNA_intronic
CAediting_1292656	chr19_10710667_+	ncRNA_intronic
CAediting_1292657	chr19_10710707_+	ncRNA_intronic
CAediting_1292658	chr19_10710712_+	ncRNA_intronic
CAediting_1292659	chr19_10710720_+	ncRNA_intronic
CAediting_1292660	chr19_10710721_+	ncRNA_intronic
CAediting_1292661	chr19_10710736_+	ncRNA_intronic
CAediting_1292662	chr19_10710738_+	ncRNA_intronic
CAediting_1292663	chr19_10710757_+	ncRNA_intronic
CAediting_1292664	chr19_10710760_+	ncRNA_intronic
CAediting_1292665	chr19_10710761_+	ncRNA_intronic
CAediting_1292666	chr19_10710762_+	ncRNA_intronic
CAediting_1292667	chr19_10710763_+	ncRNA_intronic
CAediting_1292668	chr19_10710764_+	ncRNA_intronic
CAediting_1292669	chr19_10710766_+	ncRNA_intronic
CAediting_1292670	chr19_10710768_+	ncRNA_intronic
CAediting_1292671	chr19_10710769_+	ncRNA_intronic
CAediting_1292672	chr19_10710772_+	ncRNA_intronic
CAediting_1292673	chr19_10710776_+	ncRNA_intronic
CAediting_1292674	chr19_10710784_+	ncRNA_intronic
CAediting_1292675	chr19_10710802_+	ncRNA_intronic
CAediting_1292676	chr19_10710808_+	ncRNA_intronic
CAediting_1292677	chr19_10710812_+	ncRNA_intronic
CAediting_1292678	chr19_10710825_+	ncRNA_intronic
CAediting_1292679	chr19_10710829_+	ncRNA_intronic
CAediting_1292680	chr19_10710838_+	ncRNA_intronic
CAediting_1292681	chr19_10710872_+	ncRNA_intronic
CAediting_1292682	chr19_10710873_+	ncRNA_intronic
CAediting_1292683	chr19_10710905_+	ncRNA_intronic
CAediting_1292684	chr19_10710906_+	ncRNA_intronic
CAediting_1292685	chr19_10710911_+	ncRNA_intronic
CAediting_1292686	chr19_10710912_+	ncRNA_intronic
CAediting_1292687	chr19_10710914_+	ncRNA_intronic
CAediting_1292688	chr19_10711193_+	ncRNA_exonic
CAediting_1292689	chr19_10711246_+	ncRNA_exonic
CAediting_1292690	chr19_10711272_+	ncRNA_exonic
CAediting_1292691	chr19_10711289_+	ncRNA_exonic
CAediting_1292692	chr19_10711301_+	ncRNA_exonic
CAediting_1292693	chr19_10711338_+	ncRNA_exonic
CAediting_1292694	chr19_10711346_+	ncRNA_exonic
CAediting_1292695	chr19_10711353_+	ncRNA_exonic
CAediting_1292696	chr19_10711356_+	ncRNA_exonic
CAediting_1292697	chr19_10711362_+	ncRNA_exonic
CAediting_1292698	chr19_10711382_+	ncRNA_exonic
CAediting_1292699	chr19_10711395_+	ncRNA_exonic
CAediting_1292700	chr19_10711409_+	ncRNA_exonic
CAediting_1292701	chr19_10711410_+	ncRNA_exonic
CAediting_1292702	chr19_10711433_+	ncRNA_exonic
CAediting_1292703	chr19_10711447_+	ncRNA_exonic
CAediting_1292704	chr19_10711451_+	ncRNA_exonic
CAediting_1292705	chr19_10711536_+	ncRNA_exonic
CAediting_1292706	chr19_10711561_+	ncRNA_exonic
CAediting_1292707	chr19_10711562_+	ncRNA_exonic
CAediting_1292708	chr19_10711566_+	ncRNA_exonic
CAediting_1292709	chr19_10711579_+	ncRNA_exonic
CAediting_1292710	chr19_10711591_+	ncRNA_exonic
CAediting_1292711	chr19_10711601_+	ncRNA_exonic
CAediting_1292712	chr19_10711602_+	ncRNA_exonic
CAediting_1292713	chr19_10711603_+	ncRNA_exonic
CAediting_1292714	chr19_10711634_+	ncRNA_exonic
CAediting_1292715	chr19_10711636_+	ncRNA_exonic
CAediting_1292716	chr19_10711642_+	ncRNA_exonic
CAediting_1292717	chr19_10711645_+	ncRNA_exonic
CAediting_1292718	chr19_10711659_+	ncRNA_exonic
CAediting_1292719	chr19_10711662_+	ncRNA_exonic
CAediting_1292720	chr19_10711683_+	ncRNA_exonic
CAediting_1292721	chr19_10711684_+	ncRNA_exonic
CAediting_1292722	chr19_10711696_+	ncRNA_exonic
CAediting_1292723	chr19_10711697_+	ncRNA_exonic
CAediting_1292724	chr19_10711722_+	ncRNA_exonic
CAediting_1292725	chr19_10711724_+	ncRNA_exonic
CAediting_1292726	chr19_10711733_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1292544	chr19_10702566_+	SINE	Alu	AluJr
CAediting_1292545	chr19_10703262_+	SINE	Alu	AluSq2
CAediting_1292546	chr19_10707861_+	SINE	Alu	AluSq10
CAediting_1292547	chr19_10707889_+	SINE	Alu	AluSq10
CAediting_1292548	chr19_10707966_+	SINE	Alu	AluSg4
CAediting_1292549	chr19_10708012_+	SINE	Alu	AluSg4
CAediting_1292550	chr19_10708082_+	SINE	Alu	AluSg4
CAediting_1292551	chr19_10708094_+	SINE	Alu	AluSg4
CAediting_1292552	chr19_10708110_+	SINE	Alu	AluSg4
CAediting_1292553	chr19_10708162_+	SINE	Alu	AluSg4
CAediting_1292554	chr19_10708165_+	SINE	Alu	AluSg4
CAediting_1292555	chr19_10708174_+	SINE	Alu	AluSg4
CAediting_1292556	chr19_10708185_+	SINE	Alu	AluSg4
CAediting_1292557	chr19_10708223_+	SINE	Alu	AluSg4
CAediting_1292558	chr19_10708224_+	SINE	Alu	AluSg4
CAediting_1292559	chr19_10708225_+	SINE	Alu	AluSg4
CAediting_1292560	chr19_10708237_+	SINE	Alu	AluSg4
CAediting_1292561	chr19_10708239_+	SINE	Alu	AluSg4
CAediting_1292562	chr19_10708255_+	SINE	Alu	AluSg4
CAediting_1292563	chr19_10708291_+	SINE	Alu	FRAM
CAediting_1292564	chr19_10708328_+	SINE	Alu	FRAM
CAediting_1292565	chr19_10708329_+	SINE	Alu	FRAM
CAediting_1292566	chr19_10708334_+	SINE	Alu	FRAM
CAediting_1292567	chr19_10708339_+	SINE	Alu	FRAM
CAediting_1292568	chr19_10708345_+	SINE	Alu	FRAM
CAediting_1292569	chr19_10708359_+	SINE	Alu	FRAM
CAediting_1292570	chr19_10708360_+	SINE	Alu	FRAM
CAediting_1292571	chr19_10708374_+	SINE	Alu	FRAM
CAediting_1292572	chr19_10708865_+	SINE	Alu	AluSq4
CAediting_1292573	chr19_10708866_+	SINE	Alu	AluSq4
CAediting_1292574	chr19_10708883_+	SINE	Alu	AluSq4
CAediting_1292575	chr19_10708905_+	SINE	Alu	AluSq4
CAediting_1292576	chr19_10708911_+	SINE	Alu	AluSq4
CAediting_1292577	chr19_10708940_+	SINE	Alu	AluSq4
CAediting_1292578	chr19_10708946_+	SINE	Alu	AluSq4
CAediting_1292579	chr19_10708949_+	SINE	Alu	AluSq4
CAediting_1292580	chr19_10708955_+	SINE	Alu	AluSq4
CAediting_1292581	chr19_10708966_+	SINE	Alu	AluSq4
CAediting_1292582	chr19_10709007_+	SINE	Alu	AluSq4
CAediting_1292583	chr19_10709025_+	SINE	Alu	AluSq4
CAediting_1292584	chr19_10709039_+	SINE	Alu	AluSq4
CAediting_1292585	chr19_10709041_+	SINE	Alu	AluSq4
CAediting_1292586	chr19_10709057_+	SINE	Alu	AluSq4
CAediting_1292587	chr19_10709323_+	SINE	Alu	AluJr
CAediting_1292588	chr19_10709326_+	SINE	Alu	AluJr
CAediting_1292589	chr19_10709328_+	SINE	Alu	AluJr
CAediting_1292590	chr19_10709333_+	SINE	Alu	AluJr
CAediting_1292591	chr19_10709335_+	SINE	Alu	AluJr
CAediting_1292592	chr19_10709341_+	SINE	Alu	AluJr
CAediting_1292593	chr19_10709346_+	SINE	Alu	AluJr
CAediting_1292594	chr19_10709354_+	SINE	Alu	AluJr
CAediting_1292595	chr19_10709362_+	SINE	Alu	AluJr
CAediting_1292596	chr19_10709363_+	SINE	Alu	AluJr
CAediting_1292597	chr19_10709368_+	SINE	Alu	AluJr
CAediting_1292598	chr19_10709400_+	SINE	Alu	AluJr
CAediting_1292599	chr19_10709436_+	SINE	Alu	AluSg
CAediting_1292600	chr19_10709440_+	SINE	Alu	AluSg
CAediting_1292601	chr19_10709458_+	SINE	Alu	AluSg
CAediting_1292602	chr19_10709459_+	SINE	Alu	AluSg
CAediting_1292603	chr19_10709481_+	SINE	Alu	AluSg
CAediting_1292604	chr19_10709489_+	SINE	Alu	AluSg
CAediting_1292605	chr19_10709494_+	SINE	Alu	AluSg
CAediting_1292606	chr19_10709502_+	SINE	Alu	AluSg
CAediting_1292607	chr19_10709533_+	SINE	Alu	AluSg
CAediting_1292608	chr19_10709534_+	SINE	Alu	AluSg
CAediting_1292609	chr19_10709536_+	SINE	Alu	AluSg
CAediting_1292610	chr19_10709554_+	SINE	Alu	AluSg
CAediting_1292611	chr19_10709556_+	SINE	Alu	AluSg
CAediting_1292612	chr19_10709561_+	SINE	Alu	AluSg
CAediting_1292613	chr19_10709562_+	SINE	Alu	AluSg
CAediting_1292614	chr19_10709565_+	SINE	Alu	AluSg
CAediting_1292615	chr19_10709592_+	SINE	Alu	AluYj4
CAediting_1292616	chr19_10709593_+	SINE	Alu	AluYj4
CAediting_1292617	chr19_10709615_+	SINE	Alu	AluYj4
CAediting_1292618	chr19_10709623_+	SINE	Alu	AluYj4
CAediting_1292619	chr19_10709624_+	SINE	Alu	AluYj4
CAediting_1292620	chr19_10709625_+	SINE	Alu	AluYj4
CAediting_1292621	chr19_10709652_+	SINE	Alu	AluYj4
CAediting_1292622	chr19_10709661_+	SINE	Alu	AluYj4
CAediting_1292623	chr19_10709685_+	SINE	Alu	AluYj4
CAediting_1292624	chr19_10709698_+	SINE	Alu	AluYj4
CAediting_1292625	chr19_10709702_+	SINE	Alu	AluYj4
CAediting_1292626	chr19_10709728_+	SINE	Alu	AluYj4
CAediting_1292627	chr19_10709769_+	SINE	Alu	AluYj4
CAediting_1292628	chr19_10709832_+	SINE	Alu	AluYj4
CAediting_1292629	chr19_10709864_+	SINE	Alu	AluSg
CAediting_1292630	chr19_10709884_+	SINE	Alu	AluSg
CAediting_1292631	chr19_10709890_+	SINE	Alu	AluSg
CAediting_1292632	chr19_10709891_+	SINE	Alu	AluSg
CAediting_1292633	chr19_10709926_+	SINE	Alu	AluSg
CAediting_1292634	chr19_10709931_+	SINE	Alu	AluSg
CAediting_1292635	chr19_10709950_+	SINE	Alu	AluSg
CAediting_1292636	chr19_10709993_+	SINE	Alu	AluSg
CAediting_1292637	chr19_10709998_+	SINE	Alu	AluSg
CAediting_1292638	chr19_10709999_+	SINE	Alu	AluSg
CAediting_1292639	chr19_10710029_+	SINE	Alu	AluSg
CAediting_1292640	chr19_10710035_+	SINE	Alu	AluJr
CAediting_1292641	chr19_10710087_+	SINE	Alu	AluJr
CAediting_1292642	chr19_10710105_+	SINE	Alu	AluJr
CAediting_1292643	chr19_10710110_+	SINE	Alu	AluJr
CAediting_1292644	chr19_10710126_+	SINE	Alu	AluJr
CAediting_1292645	chr19_10710134_+	SINE	Alu	AluJr
CAediting_1292646	chr19_10710140_+	SINE	Alu	AluJr
CAediting_1292647	chr19_10710164_+	SINE	Alu	AluJr
CAediting_1292648	chr19_10710169_+	SINE	Alu	AluJr
CAediting_1292649	chr19_10710199_+	SINE	Alu	AluJr
CAediting_1292650	chr19_10710372_+	SINE	Alu	AluSq4
CAediting_1292651	chr19_10710381_+	SINE	Alu	AluSq4
CAediting_1292652	chr19_10710446_+	SINE	Alu	AluSq4
CAediting_1292653	chr19_10710456_+	SINE	Alu	AluSq4
CAediting_1292654	chr19_10710658_+	SINE	Alu	AluSq2
CAediting_1292655	chr19_10710666_+	SINE	Alu	AluSq2
CAediting_1292656	chr19_10710667_+	SINE	Alu	AluSq2
CAediting_1292657	chr19_10710707_+	SINE	Alu	AluSq2
CAediting_1292658	chr19_10710712_+	SINE	Alu	AluSq2
CAediting_1292659	chr19_10710720_+	SINE	Alu	AluSq2
CAediting_1292660	chr19_10710721_+	SINE	Alu	AluSq2
CAediting_1292661	chr19_10710736_+	SINE	Alu	AluSq2
CAediting_1292662	chr19_10710738_+	SINE	Alu	AluSq2
CAediting_1292663	chr19_10710757_+	SINE	Alu	AluSq2
CAediting_1292664	chr19_10710760_+	SINE	Alu	AluSq2
CAediting_1292665	chr19_10710761_+	SINE	Alu	AluSq2
CAediting_1292666	chr19_10710762_+	SINE	Alu	AluSq2
CAediting_1292667	chr19_10710763_+	SINE	Alu	AluSq2
CAediting_1292668	chr19_10710764_+	SINE	Alu	AluSq2
CAediting_1292669	chr19_10710766_+	SINE	Alu	AluSq2
CAediting_1292670	chr19_10710768_+	SINE	Alu	AluSq2
CAediting_1292671	chr19_10710769_+	SINE	Alu	AluSq2
CAediting_1292672	chr19_10710772_+	SINE	Alu	AluSq2
CAediting_1292673	chr19_10710776_+	SINE	Alu	AluSq2
CAediting_1292674	chr19_10710784_+	SINE	Alu	AluSq2
CAediting_1292675	chr19_10710802_+	SINE	Alu	AluSq2
CAediting_1292676	chr19_10710808_+	SINE	Alu	AluSq2
CAediting_1292677	chr19_10710812_+	SINE	Alu	AluSq2
CAediting_1292678	chr19_10710825_+	SINE	Alu	AluSq2
CAediting_1292679	chr19_10710829_+	SINE	Alu	AluSq2
CAediting_1292680	chr19_10710838_+	SINE	Alu	AluSq2
CAediting_1292681	chr19_10710872_+	SINE	Alu	AluSq2
CAediting_1292682	chr19_10710873_+	SINE	Alu	AluSq2
CAediting_1292683	chr19_10710905_+	SINE	Alu	AluSq2
CAediting_1292684	chr19_10710906_+	SINE	Alu	AluSq2
CAediting_1292685	chr19_10710911_+	SINE	Alu	AluSq2
CAediting_1292686	chr19_10710912_+	SINE	Alu	AluSq2
CAediting_1292687	chr19_10710914_+	SINE	Alu	AluSq2
CAediting_1292688	chr19_10711193_+	SINE	Alu	AluSx4
CAediting_1292689	chr19_10711246_+	SINE	Alu	AluSx4
CAediting_1292690	chr19_10711272_+	SINE	Alu	AluSx4
CAediting_1292691	chr19_10711289_+	SINE	Alu	AluSx4
CAediting_1292692	chr19_10711301_+	SINE	Alu	AluSx4
CAediting_1292693	chr19_10711338_+	SINE	Alu	AluSx4
CAediting_1292694	chr19_10711346_+	SINE	Alu	AluSx4
CAediting_1292695	chr19_10711353_+	SINE	Alu	AluSx4
CAediting_1292696	chr19_10711356_+	SINE	Alu	AluSx4
CAediting_1292697	chr19_10711362_+	SINE	Alu	AluSx4
CAediting_1292698	chr19_10711382_+	SINE	Alu	AluSx4
CAediting_1292699	chr19_10711395_+	SINE	Alu	AluSx4
CAediting_1292700	chr19_10711409_+	SINE	Alu	AluSx4
CAediting_1292701	chr19_10711410_+	SINE	Alu	AluSx4
CAediting_1292702	chr19_10711433_+	SINE	Alu	AluSx4
CAediting_1292703	chr19_10711447_+	SINE	Alu	AluSx4
CAediting_1292704	chr19_10711451_+	SINE	Alu	AluSx4
CAediting_1292705	chr19_10711536_+	SINE	Alu	AluSz
CAediting_1292706	chr19_10711561_+	SINE	Alu	AluSz
CAediting_1292707	chr19_10711562_+	SINE	Alu	AluSz
CAediting_1292708	chr19_10711566_+	SINE	Alu	AluSz
CAediting_1292709	chr19_10711579_+	SINE	Alu	AluSz
CAediting_1292710	chr19_10711591_+	SINE	Alu	AluSz
CAediting_1292711	chr19_10711601_+	SINE	Alu	AluSz
CAediting_1292712	chr19_10711602_+	SINE	Alu	AluSz
CAediting_1292713	chr19_10711603_+	SINE	Alu	AluSz
CAediting_1292714	chr19_10711634_+	SINE	Alu	AluSz
CAediting_1292715	chr19_10711636_+	SINE	Alu	AluSz
CAediting_1292716	chr19_10711642_+	SINE	Alu	AluSz
CAediting_1292717	chr19_10711645_+	SINE	Alu	AluSz
CAediting_1292718	chr19_10711659_+	SINE	Alu	AluSz
CAediting_1292719	chr19_10711662_+	SINE	Alu	AluSz
CAediting_1292720	chr19_10711683_+	SINE	Alu	AluSz
CAediting_1292721	chr19_10711684_+	SINE	Alu	AluSz
CAediting_1292722	chr19_10711696_+	SINE	Alu	AluSz
CAediting_1292723	chr19_10711697_+	SINE	Alu	AluSz
CAediting_1292724	chr19_10711722_+	SINE	Alu	AluSz
CAediting_1292725	chr19_10711724_+	SINE	Alu	AluSz
CAediting_1292726	chr19_10711733_+	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for QTRT1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1292577	chr19_10708940_+	10708930:10708952	3SS	0+10i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTGTTTTTAGTAGGG	-21.02
MEX_1	CAediting_1292577	chr19_10708940_+	10708930:10708952	3SS	0+10i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTGTTTTTAGTAGGG	-21.02
ES	CAediting_1292578	chr19_10708946_+	10708930:10708952	3SS	0+4i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTATTTTTGGTAGGG	-22.62
MEX_1	CAediting_1292578	chr19_10708946_+	10708930:10708952	3SS	0+4i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTATTTTTGGTAGGG	-22.62
ES	CAediting_1292579	chr19_10708949_+	10708930:10708952	3SS	0+1i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTATTTTTAGTGGGG	-13.31
MEX_1	CAediting_1292579	chr19_10708949_+	10708930:10708952	3SS	0+1i	TAATTTTTGTATTTTTAGTAGGG	-22.06	TAATTTTTGTATTTTTAGTGGGG	-13.31
ES	CAediting_1292595	chr19_10709362_+	10709362:10709370	5SS	3+0i	AAGGCAAGA	2.81	GAGGCAAGA	2.31
MEX_2	CAediting_1292595	chr19_10709362_+	10709362:10709370	5SS	3+0i	AAGGCAAGA	2.81	GAGGCAAGA	2.31
ES	CAediting_1292596	chr19_10709363_+	10709362:10709370	5SS	2+0i	AAGGCAAGA	2.81	AGGGCAAGA	1.45
MEX_2	CAediting_1292596	chr19_10709363_+	10709362:10709370	5SS	2+0i	AAGGCAAGA	2.81	AGGGCAAGA	1.45
ES	CAediting_1292597	chr19_10709368_+	10709362:10709370	5SS	0+4i	AAGGCAAGA	2.81	AAGGCAGGA	1.7
MEX_2	CAediting_1292597	chr19_10709368_+	10709362:10709370	5SS	0+4i	AAGGCAAGA	2.81	AAGGCAGGA	1.7
ES	CAediting_1292598	chr19_10709400_+	10709398:10709406	5SS	1+0i	ATAGTGAGA	1.69	ATGGTGAGA	7.23

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213339.7.QTRT1.

Correlation between RNA A-to-I editing and PSI for ENSG00000213339.7.QTRT1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for QTRT1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LUAD.CAediting_1292594.ENSG00000213339.QTRT1.png
Soverview

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Protein coding region RNA A-to-I editings for QTRT1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for QTRT1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_77128	chr1_85133844_+	ENSG00000213339.7	ENST00000421333	hsa-miR-4423-3p	10712775	10712781	7mer-m8	10712762	10712782	150	-19.05

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for QTRT1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for QTRT1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1292591	chr19_10709335_+	0.00843243353541224	0.337151934405571	.	.	.	.
LGG	CAediting_1292594	chr19_10709354_+	.	.	.	.	0.0115097897133881	0.202491720086757

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Relation with cancer stages for QTRT1

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1292594	chr19_10709354_+	0.019771367046293	0.19681049669609

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Relation with survival for QTRT1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for QTRT1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for QTRT1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene