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Editing gene: CALU (CAeditome ID:813)

Gene summary for CALU

Gene summary

Gene information	Gene symbol	CALU
	Gene ID	813
	Gene name	calumenin
	Synonyms	-
	Cytomap	7q32.1
	Type of gene	protein-coding
	Description	calumeninIEF SSP 9302crocalbin-like proteinmultiple EF-hand protein
	Modification date	20210518
	UniProtAcc	O43852
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CALU	GO:0005509	Calumenin	10094503
CALU	GO:0005783	Calumenin	0000052

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RNA A-to-I events for CALU

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000128595.15

RNA A-to-I editing events in Cancer.

CAediting_600142(128740986, +), CAediting_600143(128742655, +), CAediting_600144(128742692, +), CAediting_600145(128743381, +), CAediting_600146(128743622, +), CAediting_600147(128743635, +), CAediting_600148(128743640, +), CAediting_600149(128743678, +), CAediting_600150(128743682, +), CAediting_600151(128743687, +), CAediting_600152(128743696, +), CAediting_600153(128743766, +), CAediting_600154(128743778, +), CAediting_600155(128743937, +), CAediting_600156(128743950, +), CAediting_600157(128743951, +), CAediting_600158(128744045, +), CAediting_600159(128744046, +), CAediting_600160(128744047, +), CAediting_600161(128744048, +), CAediting_600162(128744050, +), CAediting_600163(128744072, +), CAediting_600164(128744086, +), CAediting_600165(128744108, +), CAediting_600166(128744112, +), CAediting_600167(128744126, +), CAediting_600168(128744127, +), CAediting_600169(128745346, +), CAediting_600170(128745364, +), CAediting_600171(128745365, +), CAediting_600172(128745370, +), CAediting_600173(128745466, +), CAediting_600174(128745478, +), CAediting_600175(128745484, +), CAediting_600176(128745490, +), CAediting_600177(128745508, +), CAediting_600178(128745525, +), CAediting_600179(128745539, +), CAediting_600180(128745546, +), CAediting_600181(128745586, +), CAediting_600182(128745591, +), CAediting_600183(128745592, +), CAediting_600184(128746477, +), CAediting_600185(128746554, +), CAediting_600186(128746583, +), CAediting_600187(128746588, +), CAediting_600188(128746593, +), CAediting_600189(128747042, +), CAediting_600190(128747048, +), CAediting_600191(128749949, +), CAediting_600192(128749953, +), CAediting_600193(128749963, +), CAediting_600194(128749972, +), CAediting_600195(128749977, +), CAediting_600196(128749980, +), CAediting_600197(128750024, +), CAediting_600198(128750038, +), CAediting_600199(128750039, +), CAediting_600200(128750041, +), CAediting_600201(128750047, +), CAediting_600202(128750049, +), CAediting_600203(128750063, +), CAediting_600204(128750078, +), CAediting_600205(128750081, +), CAediting_600206(128750107, +), CAediting_600207(128750113, +), CAediting_600208(128750117, +), CAediting_600209(128750134, +), CAediting_600210(128750173, +), CAediting_600211(128750178, +), CAediting_600212(128750180, +), CAediting_600213(128750183, +), CAediting_600214(128751034, +), CAediting_600215(128751035, +), CAediting_600216(128751040, +), CAediting_600217(128751086, +), CAediting_600218(128751117, +), CAediting_600219(128751126, +), CAediting_600220(128751127, +), CAediting_600221(128751141, +), CAediting_600222(128751167, +), CAediting_600223(128751173, +), CAediting_600224(128751194, +), CAediting_600225(128751220, +), CAediting_600226(128751229, +), CAediting_600227(128751237, +), CAediting_600228(128751238, +), CAediting_600229(128751245, +), CAediting_600230(128751495, +), CAediting_600231(128751545, +), CAediting_600232(128751584, +), CAediting_600233(128751616, +), CAediting_600234(128751620, +), CAediting_600235(128751661, +), CAediting_600236(128751666, +), CAediting_600237(128752724, +), CAediting_600238(128752754, +), CAediting_600239(128752755, +), CAediting_600240(128752765, +), CAediting_600241(128752778, +), CAediting_600242(128752785, +), CAediting_600243(128752787, +), CAediting_600244(128752814, +), CAediting_600245(128752824, +), CAediting_600246(128752826, +), CAediting_600247(128752850, +), CAediting_600248(128752851, +), CAediting_600249(128752865, +), CAediting_600250(128752868, +), CAediting_600251(128752882, +), CAediting_600252(128752894, +), CAediting_600253(128752951, +), CAediting_600254(128752952, +), CAediting_600255(128752959, +), CAediting_600256(128752964, +), CAediting_600257(128755168, +), CAediting_600258(128755214, +), CAediting_600259(128755231, +), CAediting_600260(128756796, +), CAediting_600261(128756964, +), CAediting_600262(128759963, +), CAediting_600263(128760040, +), CAediting_600264(128760078, +), CAediting_600265(128760151, +), CAediting_600266(128760177, +), CAediting_600267(128760787, +), CAediting_600268(128762760, +), CAediting_600269(128762766, +), CAediting_600270(128762806, +), CAediting_600271(128762847, +), CAediting_600272(128762848, +), CAediting_600273(128762876, +), CAediting_600274(128762902, +), CAediting_600275(128762906, +), CAediting_600276(128762914, +), CAediting_600277(128762927, +), CAediting_600278(128762928, +), CAediting_600279(128762929, +), CAediting_600280(128762944, +), CAediting_600281(128763367, +), CAediting_600282(128763369, +), CAediting_600283(128764159, +), CAediting_600284(128764172, +), CAediting_600285(128764173, +), CAediting_600286(128764195, +), CAediting_600287(128764229, +), CAediting_600288(128764230, +), CAediting_600289(128764233, +), CAediting_600290(128764263, +), CAediting_600291(128764267, +), CAediting_600292(128764284, +), CAediting_600293(128764286, +), CAediting_600294(128764292, +), CAediting_600295(128764300, +), CAediting_600296(128764318, +), CAediting_600297(128764346, +), CAediting_600298(128764360, +), CAediting_600299(128764367, +), CAediting_600300(128764378, +), CAediting_600301(128764383, +), CAediting_600302(128764396, +), CAediting_600303(128764405, +), CAediting_600304(128764406, +), CAediting_600305(128764414, +), CAediting_600306(128764947, +), CAediting_600307(128764953, +), CAediting_600308(128764994, +), CAediting_600309(128765049, +), CAediting_600310(128765067, +), CAediting_600311(128765071, +), CAediting_600312(128765244, +), CAediting_600313(128765252, +), CAediting_600314(128765300, +), CAediting_600315(128765350, +), CAediting_600316(128765368, +), CAediting_600317(128765404, +), CAediting_600318(128765438, +), CAediting_600319(128766010, +), CAediting_600320(128766012, +), CAediting_600321(128766018, +), CAediting_600322(128766057, +), CAediting_600323(128766074, +), CAediting_600324(128766086, +), CAediting_600325(128766097, +), CAediting_600326(128766099, +), CAediting_600327(128766182, +), CAediting_600328(128766558, +), CAediting_600329(128766568, +), CAediting_600330(128766574, +), CAediting_600331(128766718, +), CAediting_600332(128766719, +), CAediting_600333(128768727, +), CAediting_600334(128768826, +), CAediting_600335(128768829, +),

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RNA editing positional annotations for CALU using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_600142	chr7_128740986_+	intronic
CAediting_600143	chr7_128742655_+	intronic
CAediting_600144	chr7_128742692_+	intronic
CAediting_600145	chr7_128743381_+	intronic
CAediting_600146	chr7_128743622_+	intronic
CAediting_600147	chr7_128743635_+	intronic
CAediting_600148	chr7_128743640_+	intronic
CAediting_600149	chr7_128743678_+	intronic
CAediting_600150	chr7_128743682_+	intronic
CAediting_600151	chr7_128743687_+	intronic
CAediting_600152	chr7_128743696_+	intronic
CAediting_600153	chr7_128743766_+	intronic
CAediting_600154	chr7_128743778_+	intronic
CAediting_600155	chr7_128743937_+	intronic
CAediting_600156	chr7_128743950_+	intronic
CAediting_600157	chr7_128743951_+	intronic
CAediting_600158	chr7_128744045_+	intronic
CAediting_600159	chr7_128744046_+	intronic
CAediting_600160	chr7_128744047_+	intronic
CAediting_600161	chr7_128744048_+	intronic
CAediting_600162	chr7_128744050_+	intronic
CAediting_600163	chr7_128744072_+	intronic
CAediting_600164	chr7_128744086_+	intronic
CAediting_600165	chr7_128744108_+	intronic
CAediting_600166	chr7_128744112_+	intronic
CAediting_600167	chr7_128744126_+	intronic
CAediting_600168	chr7_128744127_+	intronic
CAediting_600169	chr7_128745346_+	intronic
CAediting_600170	chr7_128745364_+	intronic
CAediting_600171	chr7_128745365_+	intronic
CAediting_600172	chr7_128745370_+	intronic
CAediting_600173	chr7_128745466_+	intronic
CAediting_600174	chr7_128745478_+	intronic
CAediting_600175	chr7_128745484_+	intronic
CAediting_600176	chr7_128745490_+	intronic
CAediting_600177	chr7_128745508_+	intronic
CAediting_600178	chr7_128745525_+	intronic
CAediting_600179	chr7_128745539_+	intronic
CAediting_600180	chr7_128745546_+	intronic
CAediting_600181	chr7_128745586_+	intronic
CAediting_600182	chr7_128745591_+	intronic
CAediting_600183	chr7_128745592_+	intronic
CAediting_600184	chr7_128746477_+	intronic
CAediting_600185	chr7_128746554_+	intronic
CAediting_600186	chr7_128746583_+	intronic
CAediting_600187	chr7_128746588_+	intronic
CAediting_600188	chr7_128746593_+	intronic
CAediting_600189	chr7_128747042_+	intronic
CAediting_600190	chr7_128747048_+	intronic
CAediting_600191	chr7_128749949_+	intronic
CAediting_600192	chr7_128749953_+	intronic
CAediting_600193	chr7_128749963_+	intronic
CAediting_600194	chr7_128749972_+	intronic
CAediting_600195	chr7_128749977_+	intronic
CAediting_600196	chr7_128749980_+	intronic
CAediting_600197	chr7_128750024_+	intronic
CAediting_600198	chr7_128750038_+	intronic
CAediting_600199	chr7_128750039_+	intronic
CAediting_600200	chr7_128750041_+	intronic
CAediting_600201	chr7_128750047_+	intronic
CAediting_600202	chr7_128750049_+	intronic
CAediting_600203	chr7_128750063_+	intronic
CAediting_600204	chr7_128750078_+	intronic
CAediting_600205	chr7_128750081_+	intronic
CAediting_600206	chr7_128750107_+	intronic
CAediting_600207	chr7_128750113_+	intronic
CAediting_600208	chr7_128750117_+	intronic
CAediting_600209	chr7_128750134_+	intronic
CAediting_600210	chr7_128750173_+	intronic
CAediting_600211	chr7_128750178_+	intronic
CAediting_600212	chr7_128750180_+	intronic
CAediting_600213	chr7_128750183_+	intronic
CAediting_600214	chr7_128751034_+	intronic
CAediting_600215	chr7_128751035_+	intronic
CAediting_600216	chr7_128751040_+	intronic
CAediting_600217	chr7_128751086_+	intronic
CAediting_600218	chr7_128751117_+	intronic
CAediting_600219	chr7_128751126_+	intronic
CAediting_600220	chr7_128751127_+	intronic
CAediting_600221	chr7_128751141_+	intronic
CAediting_600222	chr7_128751167_+	intronic
CAediting_600223	chr7_128751173_+	intronic
CAediting_600224	chr7_128751194_+	intronic
CAediting_600225	chr7_128751220_+	intronic
CAediting_600226	chr7_128751229_+	intronic
CAediting_600227	chr7_128751237_+	intronic
CAediting_600228	chr7_128751238_+	intronic
CAediting_600229	chr7_128751245_+	intronic
CAediting_600230	chr7_128751495_+	intronic
CAediting_600231	chr7_128751545_+	intronic
CAediting_600232	chr7_128751584_+	intronic
CAediting_600233	chr7_128751616_+	intronic
CAediting_600234	chr7_128751620_+	intronic
CAediting_600235	chr7_128751661_+	intronic
CAediting_600236	chr7_128751666_+	intronic
CAediting_600237	chr7_128752724_+	intronic
CAediting_600238	chr7_128752754_+	intronic
CAediting_600239	chr7_128752755_+	intronic
CAediting_600240	chr7_128752765_+	intronic
CAediting_600241	chr7_128752778_+	intronic
CAediting_600242	chr7_128752785_+	intronic
CAediting_600243	chr7_128752787_+	intronic
CAediting_600244	chr7_128752814_+	intronic
CAediting_600245	chr7_128752824_+	intronic
CAediting_600246	chr7_128752826_+	intronic
CAediting_600247	chr7_128752850_+	intronic
CAediting_600248	chr7_128752851_+	intronic
CAediting_600249	chr7_128752865_+	intronic
CAediting_600250	chr7_128752868_+	intronic
CAediting_600251	chr7_128752882_+	intronic
CAediting_600252	chr7_128752894_+	intronic
CAediting_600253	chr7_128752951_+	intronic
CAediting_600254	chr7_128752952_+	intronic
CAediting_600255	chr7_128752959_+	intronic
CAediting_600256	chr7_128752964_+	intronic
CAediting_600257	chr7_128755168_+	intronic
CAediting_600258	chr7_128755214_+	intronic
CAediting_600259	chr7_128755231_+	intronic
CAediting_600260	chr7_128756796_+	intronic
CAediting_600261	chr7_128756964_+	intronic
CAediting_600262	chr7_128759963_+	intronic
CAediting_600263	chr7_128760040_+	intronic
CAediting_600264	chr7_128760078_+	intronic
CAediting_600265	chr7_128760151_+	intronic
CAediting_600266	chr7_128760177_+	intronic
CAediting_600267	chr7_128760787_+	intronic
CAediting_600268	chr7_128762760_+	intronic
CAediting_600269	chr7_128762766_+	intronic
CAediting_600270	chr7_128762806_+	intronic
CAediting_600271	chr7_128762847_+	intronic
CAediting_600272	chr7_128762848_+	intronic
CAediting_600273	chr7_128762876_+	intronic
CAediting_600274	chr7_128762902_+	intronic
CAediting_600275	chr7_128762906_+	intronic
CAediting_600276	chr7_128762914_+	intronic
CAediting_600277	chr7_128762927_+	intronic
CAediting_600278	chr7_128762928_+	intronic
CAediting_600279	chr7_128762929_+	intronic
CAediting_600280	chr7_128762944_+	intronic
CAediting_600281	chr7_128763367_+	intronic
CAediting_600282	chr7_128763369_+	intronic
CAediting_600283	chr7_128764159_+	intronic
CAediting_600284	chr7_128764172_+	intronic
CAediting_600285	chr7_128764173_+	intronic
CAediting_600286	chr7_128764195_+	intronic
CAediting_600287	chr7_128764229_+	intronic
CAediting_600288	chr7_128764230_+	intronic
CAediting_600289	chr7_128764233_+	intronic
CAediting_600290	chr7_128764263_+	intronic
CAediting_600291	chr7_128764267_+	intronic
CAediting_600292	chr7_128764284_+	intronic
CAediting_600293	chr7_128764286_+	intronic
CAediting_600294	chr7_128764292_+	intronic
CAediting_600295	chr7_128764300_+	intronic
CAediting_600296	chr7_128764318_+	intronic
CAediting_600297	chr7_128764346_+	intronic
CAediting_600298	chr7_128764360_+	intronic
CAediting_600299	chr7_128764367_+	intronic
CAediting_600300	chr7_128764378_+	intronic
CAediting_600301	chr7_128764383_+	intronic
CAediting_600302	chr7_128764396_+	intronic
CAediting_600303	chr7_128764405_+	intronic
CAediting_600304	chr7_128764406_+	intronic
CAediting_600305	chr7_128764414_+	intronic
CAediting_600306	chr7_128764947_+	intronic
CAediting_600307	chr7_128764953_+	intronic
CAediting_600308	chr7_128764994_+	intronic
CAediting_600309	chr7_128765049_+	intronic
CAediting_600310	chr7_128765067_+	intronic
CAediting_600311	chr7_128765071_+	intronic
CAediting_600312	chr7_128765244_+	intronic
CAediting_600313	chr7_128765252_+	intronic
CAediting_600314	chr7_128765300_+	intronic
CAediting_600315	chr7_128765350_+	intronic
CAediting_600316	chr7_128765368_+	intronic
CAediting_600317	chr7_128765404_+	intronic
CAediting_600318	chr7_128765438_+	intronic
CAediting_600319	chr7_128766010_+	intronic
CAediting_600320	chr7_128766012_+	intronic
CAediting_600321	chr7_128766018_+	intronic
CAediting_600322	chr7_128766057_+	intronic
CAediting_600323	chr7_128766074_+	intronic
CAediting_600324	chr7_128766086_+	intronic
CAediting_600325	chr7_128766097_+	intronic
CAediting_600326	chr7_128766099_+	intronic
CAediting_600327	chr7_128766182_+	intronic
CAediting_600328	chr7_128766558_+	intronic
CAediting_600329	chr7_128766568_+	intronic
CAediting_600330	chr7_128766574_+	intronic
CAediting_600331	chr7_128766718_+	intronic
CAediting_600332	chr7_128766719_+	intronic
CAediting_600333	chr7_128768727_+	intronic
CAediting_600334	chr7_128768826_+	intronic
CAediting_600335	chr7_128768829_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_600142	chr7_128740986_+	SINE	Alu	FLAM_A
CAediting_600146	chr7_128743622_+	SINE	Alu	AluJb
CAediting_600147	chr7_128743635_+	SINE	Alu	AluJb
CAediting_600148	chr7_128743640_+	SINE	Alu	AluJb
CAediting_600149	chr7_128743678_+	SINE	Alu	AluJb
CAediting_600150	chr7_128743682_+	SINE	Alu	AluJb
CAediting_600151	chr7_128743687_+	SINE	Alu	AluJb
CAediting_600152	chr7_128743696_+	SINE	Alu	AluJb
CAediting_600153	chr7_128743766_+	SINE	Alu	AluJb
CAediting_600154	chr7_128743778_+	SINE	Alu	AluJb
CAediting_600155	chr7_128743937_+	SINE	Alu	AluSz
CAediting_600156	chr7_128743950_+	SINE	Alu	AluSz
CAediting_600157	chr7_128743951_+	SINE	Alu	AluSz
CAediting_600158	chr7_128744045_+	SINE	Alu	AluSz
CAediting_600159	chr7_128744046_+	SINE	Alu	AluSz
CAediting_600160	chr7_128744047_+	SINE	Alu	AluSz
CAediting_600161	chr7_128744048_+	SINE	Alu	AluSz
CAediting_600162	chr7_128744050_+	SINE	Alu	AluSz
CAediting_600163	chr7_128744072_+	SINE	Alu	AluSz
CAediting_600164	chr7_128744086_+	SINE	Alu	AluSz
CAediting_600165	chr7_128744108_+	SINE	Alu	AluSz
CAediting_600166	chr7_128744112_+	SINE	Alu	AluSz
CAediting_600167	chr7_128744126_+	SINE	Alu	AluSz
CAediting_600168	chr7_128744127_+	SINE	Alu	AluSz
CAediting_600169	chr7_128745346_+	SINE	Alu	AluJr
CAediting_600170	chr7_128745364_+	SINE	Alu	AluJr
CAediting_600171	chr7_128745365_+	SINE	Alu	AluJr
CAediting_600172	chr7_128745370_+	SINE	Alu	AluJr
CAediting_600173	chr7_128745466_+	SINE	Alu	AluJr
CAediting_600174	chr7_128745478_+	SINE	Alu	AluJr
CAediting_600175	chr7_128745484_+	SINE	Alu	AluJr
CAediting_600176	chr7_128745490_+	SINE	Alu	AluJr
CAediting_600177	chr7_128745508_+	SINE	Alu	AluJr
CAediting_600178	chr7_128745525_+	SINE	Alu	AluJr
CAediting_600179	chr7_128745539_+	SINE	Alu	AluJr
CAediting_600180	chr7_128745546_+	SINE	Alu	AluJr
CAediting_600181	chr7_128745586_+	SINE	Alu	AluJr
CAediting_600182	chr7_128745591_+	SINE	Alu	AluJr
CAediting_600183	chr7_128745592_+	SINE	Alu	AluJr
CAediting_600184	chr7_128746477_+	SINE	Alu	AluJb
CAediting_600185	chr7_128746554_+	SINE	Alu	AluJb
CAediting_600186	chr7_128746583_+	SINE	Alu	AluJb
CAediting_600187	chr7_128746588_+	SINE	Alu	AluJb
CAediting_600188	chr7_128746593_+	SINE	Alu	AluJb
CAediting_600189	chr7_128747042_+	SINE	Alu	AluY
CAediting_600190	chr7_128747048_+	SINE	Alu	AluY
CAediting_600191	chr7_128749949_+	SINE	Alu	AluY
CAediting_600192	chr7_128749953_+	SINE	Alu	AluY
CAediting_600193	chr7_128749963_+	SINE	Alu	AluY
CAediting_600194	chr7_128749972_+	SINE	Alu	AluY
CAediting_600195	chr7_128749977_+	SINE	Alu	AluY
CAediting_600196	chr7_128749980_+	SINE	Alu	AluY
CAediting_600197	chr7_128750024_+	SINE	Alu	AluY
CAediting_600198	chr7_128750038_+	SINE	Alu	AluY
CAediting_600199	chr7_128750039_+	SINE	Alu	AluY
CAediting_600200	chr7_128750041_+	SINE	Alu	AluY
CAediting_600201	chr7_128750047_+	SINE	Alu	AluY
CAediting_600202	chr7_128750049_+	SINE	Alu	AluY
CAediting_600203	chr7_128750063_+	SINE	Alu	AluY
CAediting_600204	chr7_128750078_+	SINE	Alu	AluY
CAediting_600205	chr7_128750081_+	SINE	Alu	AluY
CAediting_600206	chr7_128750107_+	SINE	Alu	AluY
CAediting_600207	chr7_128750113_+	SINE	Alu	AluY
CAediting_600208	chr7_128750117_+	SINE	Alu	AluY
CAediting_600209	chr7_128750134_+	SINE	Alu	AluY
CAediting_600210	chr7_128750173_+	SINE	Alu	AluY
CAediting_600211	chr7_128750178_+	SINE	Alu	AluY
CAediting_600212	chr7_128750180_+	SINE	Alu	AluY
CAediting_600213	chr7_128750183_+	SINE	Alu	AluY
CAediting_600214	chr7_128751034_+	SINE	Alu	AluSc
CAediting_600215	chr7_128751035_+	SINE	Alu	AluSc
CAediting_600216	chr7_128751040_+	SINE	Alu	AluSc
CAediting_600217	chr7_128751086_+	SINE	Alu	AluSc
CAediting_600218	chr7_128751117_+	SINE	Alu	AluSc
CAediting_600219	chr7_128751126_+	SINE	Alu	AluSc
CAediting_600220	chr7_128751127_+	SINE	Alu	AluSc
CAediting_600221	chr7_128751141_+	SINE	Alu	AluSc
CAediting_600222	chr7_128751167_+	SINE	Alu	AluSc
CAediting_600223	chr7_128751173_+	SINE	Alu	AluSc
CAediting_600224	chr7_128751194_+	SINE	Alu	AluSc
CAediting_600225	chr7_128751220_+	SINE	Alu	AluSc
CAediting_600226	chr7_128751229_+	SINE	Alu	AluSc
CAediting_600227	chr7_128751237_+	SINE	Alu	AluSc
CAediting_600228	chr7_128751238_+	SINE	Alu	AluSc
CAediting_600229	chr7_128751245_+	SINE	Alu	AluSc
CAediting_600230	chr7_128751495_+	SINE	Alu	AluJo
CAediting_600231	chr7_128751545_+	SINE	Alu	AluJo
CAediting_600232	chr7_128751584_+	SINE	Alu	AluJo
CAediting_600233	chr7_128751616_+	SINE	Alu	AluJo
CAediting_600234	chr7_128751620_+	SINE	Alu	AluJo
CAediting_600235	chr7_128751661_+	SINE	Alu	AluJo
CAediting_600236	chr7_128751666_+	SINE	Alu	AluJo
CAediting_600237	chr7_128752724_+	SINE	Alu	AluSx
CAediting_600238	chr7_128752754_+	SINE	Alu	AluSx
CAediting_600239	chr7_128752755_+	SINE	Alu	AluSx
CAediting_600240	chr7_128752765_+	SINE	Alu	AluSx
CAediting_600241	chr7_128752778_+	SINE	Alu	AluSx
CAediting_600242	chr7_128752785_+	SINE	Alu	AluSx
CAediting_600243	chr7_128752787_+	SINE	Alu	AluSx
CAediting_600244	chr7_128752814_+	SINE	Alu	AluSx
CAediting_600245	chr7_128752824_+	SINE	Alu	AluSx
CAediting_600246	chr7_128752826_+	SINE	Alu	AluSx
CAediting_600247	chr7_128752850_+	SINE	Alu	AluSx
CAediting_600248	chr7_128752851_+	SINE	Alu	AluSx
CAediting_600249	chr7_128752865_+	SINE	Alu	AluSx
CAediting_600250	chr7_128752868_+	SINE	Alu	AluSx
CAediting_600251	chr7_128752882_+	SINE	Alu	AluSx
CAediting_600252	chr7_128752894_+	SINE	Alu	AluSx
CAediting_600253	chr7_128752951_+	SINE	Alu	AluSx
CAediting_600254	chr7_128752952_+	SINE	Alu	AluSx
CAediting_600255	chr7_128752959_+	SINE	Alu	AluSx
CAediting_600256	chr7_128752964_+	SINE	Alu	AluSx
CAediting_600257	chr7_128755168_+	SINE	Alu	AluJo
CAediting_600258	chr7_128755214_+	SINE	Alu	AluJo
CAediting_600259	chr7_128755231_+	SINE	Alu	AluJo
CAediting_600260	chr7_128756796_+	SINE	Alu	AluJo
CAediting_600261	chr7_128756964_+	SINE	Alu	AluJo
CAediting_600262	chr7_128759963_+	SINE	Alu	AluSq2
CAediting_600263	chr7_128760040_+	SINE	Alu	AluSq2
CAediting_600264	chr7_128760078_+	SINE	Alu	AluSq2
CAediting_600265	chr7_128760151_+	SINE	Alu	AluSq2
CAediting_600266	chr7_128760177_+	SINE	Alu	AluSq2
CAediting_600267	chr7_128760787_+	SINE	Alu	AluY
CAediting_600268	chr7_128762760_+	SINE	Alu	AluSz6
CAediting_600269	chr7_128762766_+	SINE	Alu	AluSz6
CAediting_600270	chr7_128762806_+	SINE	Alu	AluSz6
CAediting_600271	chr7_128762847_+	SINE	Alu	AluSz6
CAediting_600272	chr7_128762848_+	SINE	Alu	AluSz6
CAediting_600273	chr7_128762876_+	SINE	Alu	AluSz6
CAediting_600274	chr7_128762902_+	SINE	Alu	AluSz6
CAediting_600275	chr7_128762906_+	SINE	Alu	AluSz6
CAediting_600276	chr7_128762914_+	SINE	Alu	AluSz6
CAediting_600277	chr7_128762927_+	SINE	Alu	AluSz6
CAediting_600278	chr7_128762928_+	SINE	Alu	AluSz6
CAediting_600279	chr7_128762929_+	SINE	Alu	AluSz6
CAediting_600280	chr7_128762944_+	SINE	Alu	AluSz6
CAediting_600281	chr7_128763367_+	SINE	Alu	AluSg
CAediting_600282	chr7_128763369_+	SINE	Alu	AluSg
CAediting_600283	chr7_128764159_+	SINE	Alu	AluJb
CAediting_600284	chr7_128764172_+	SINE	Alu	AluJb
CAediting_600285	chr7_128764173_+	SINE	Alu	AluJb
CAediting_600286	chr7_128764195_+	SINE	Alu	AluJb
CAediting_600287	chr7_128764229_+	SINE	Alu	AluJb
CAediting_600288	chr7_128764230_+	SINE	Alu	AluJb
CAediting_600289	chr7_128764233_+	SINE	Alu	AluJb
CAediting_600290	chr7_128764263_+	SINE	Alu	AluJb
CAediting_600291	chr7_128764267_+	SINE	Alu	AluJb
CAediting_600292	chr7_128764284_+	SINE	Alu	AluJb
CAediting_600293	chr7_128764286_+	SINE	Alu	AluJb
CAediting_600294	chr7_128764292_+	SINE	Alu	AluJb
CAediting_600295	chr7_128764300_+	SINE	Alu	AluJb
CAediting_600296	chr7_128764318_+	SINE	Alu	AluJb
CAediting_600297	chr7_128764346_+	SINE	Alu	AluJb
CAediting_600298	chr7_128764360_+	SINE	Alu	AluJb
CAediting_600299	chr7_128764367_+	SINE	Alu	AluJb
CAediting_600300	chr7_128764378_+	SINE	Alu	AluJb
CAediting_600301	chr7_128764383_+	SINE	Alu	AluJb
CAediting_600302	chr7_128764396_+	SINE	Alu	AluJb
CAediting_600303	chr7_128764405_+	SINE	Alu	AluJb
CAediting_600304	chr7_128764406_+	SINE	Alu	AluJb
CAediting_600305	chr7_128764414_+	SINE	Alu	AluJb
CAediting_600306	chr7_128764947_+	SINE	Alu	AluJo
CAediting_600307	chr7_128764953_+	SINE	Alu	AluJo
CAediting_600308	chr7_128764994_+	SINE	Alu	AluJo
CAediting_600309	chr7_128765049_+	SINE	Alu	AluJo
CAediting_600310	chr7_128765067_+	SINE	Alu	AluJo
CAediting_600311	chr7_128765071_+	SINE	Alu	AluJo
CAediting_600312	chr7_128765244_+	SINE	Alu	AluJb
CAediting_600313	chr7_128765252_+	SINE	Alu	AluJb
CAediting_600314	chr7_128765300_+	SINE	Alu	AluJb
CAediting_600315	chr7_128765350_+	SINE	Alu	AluJb
CAediting_600316	chr7_128765368_+	SINE	Alu	AluJb
CAediting_600317	chr7_128765404_+	SINE	Alu	AluJb
CAediting_600318	chr7_128765438_+	SINE	Alu	AluJb
CAediting_600319	chr7_128766010_+	SINE	Alu	AluSz
CAediting_600320	chr7_128766012_+	SINE	Alu	AluSz
CAediting_600321	chr7_128766018_+	SINE	Alu	AluSz
CAediting_600322	chr7_128766057_+	SINE	Alu	AluSz
CAediting_600323	chr7_128766074_+	SINE	Alu	AluSz
CAediting_600324	chr7_128766086_+	SINE	Alu	AluSz
CAediting_600325	chr7_128766097_+	SINE	Alu	AluSz
CAediting_600326	chr7_128766099_+	SINE	Alu	AluSz
CAediting_600327	chr7_128766182_+	SINE	Alu	AluSz
CAediting_600328	chr7_128766558_+	SINE	Alu	AluSx
CAediting_600329	chr7_128766568_+	SINE	Alu	AluSx
CAediting_600330	chr7_128766574_+	SINE	Alu	AluSx
CAediting_600331	chr7_128766718_+	SINE	Alu	AluSx
CAediting_600332	chr7_128766719_+	SINE	Alu	AluSx
CAediting_600333	chr7_128768727_+	SINE	Alu	AluSp
CAediting_600334	chr7_128768826_+	SINE	Alu	AluSp
CAediting_600335	chr7_128768829_+	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for CALU

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000128595.15.CALU.

Correlation between RNA A-to-I editing and PSI for ENSG00000128595.15.CALU.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CALU

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CALU

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CALU

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000128595.15	ENST00000535011	hsa-miR-605-3p	128771047	128771053	7mer-m8	128771036	128771054	151	-19.17
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000535011	hsa-miR-4477b	128769470	128769476	7mer-m8	128769456	128769477	151	-11.82
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000535011	hsa-miR-4477b	128769187	128769194	8mer-1a	128769173	128769194	151	-11.72
CAediting_748296	chr10_51299626_+	ENSG00000128595.15	ENST00000542996	hsa-miR-605-3p	128771047	128771053	7mer-m8	128771036	128771054	151	-19.17
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000542996	hsa-miR-4477b	128769187	128769194	8mer-1a	128769173	128769194	151	-11.72
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000542996	hsa-miR-4477b	128769470	128769476	7mer-m8	128769456	128769477	151	-11.82
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000449187	hsa-miR-4477b	128769187	128769194	8mer-1a	128769173	128769194	151	-11.72
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000449187	hsa-miR-4477b	128769470	128769476	7mer-m8	128769456	128769477	151	-11.82
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000479257	hsa-miR-4477b	128769187	128769194	8mer-1a	128769173	128769194	151	-11.72
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000479257	hsa-miR-4477b	128769470	128769476	7mer-m8	128769456	128769477	151	-11.82
CAediting_688080	chr9_63819626_+	ENSG00000128595.15	ENST00000493278	hsa-miR-4477b	128769187	128769194	8mer-1a	128769173	128769194	151	-11.72
CAediting_1229413	chr17_67471544_+	ENSG00000128595.15	ENST00000535011	hsa-miR-548aa	128769217	128769224	8mer-1a	128769200	128769224	147	-7.33
CAediting_1229414	chr17_67471546_+	ENSG00000128595.15	ENST00000535011	hsa-miR-548aa	128770900	128770906	7mer-m8	128770880	128770907	151	-13.17
CAediting_414656	chr5_72878640_+	ENSG00000128595.15	ENST00000535011	hsa-miR-4804-3p	128769835	128769842	8mer-1a	128769822	128769842	140	-14.24
CAediting_604450	chr7_133034877_-	ENSG00000128595.15	ENST00000535011	hsa-miR-3654	128769717	128769724	8mer-1a	128769706	128769724	140	-15.37
CAediting_1229413	chr17_67471544_+	ENSG00000128595.15	ENST00000542996	hsa-miR-548aa	128769217	128769224	8mer-1a	128769200	128769224	147	-7.33
CAediting_1229414	chr17_67471546_+	ENSG00000128595.15	ENST00000542996	hsa-miR-548aa	128770900	128770906	7mer-m8	128770880	128770907	151	-13.17
CAediting_414656	chr5_72878640_+	ENSG00000128595.15	ENST00000542996	hsa-miR-4804-3p	128769835	128769842	8mer-1a	128769822	128769842	140	-14.24
CAediting_604450	chr7_133034877_-	ENSG00000128595.15	ENST00000542996	hsa-miR-3654	128769717	128769724	8mer-1a	128769706	128769724	140	-15.37
CAediting_1229413	chr17_67471544_+	ENSG00000128595.15	ENST00000449187	hsa-miR-548aa	128769217	128769224	8mer-1a	128769200	128769224	147	-7.33
CAediting_414656	chr5_72878640_+	ENSG00000128595.15	ENST00000449187	hsa-miR-4804-3p	128769835	128769842	8mer-1a	128769822	128769842	140	-14.24
CAediting_604450	chr7_133034877_-	ENSG00000128595.15	ENST00000449187	hsa-miR-3654	128769717	128769724	8mer-1a	128769706	128769724	140	-15.37
CAediting_1229413	chr17_67471544_+	ENSG00000128595.15	ENST00000479257	hsa-miR-548aa	128769217	128769224	8mer-1a	128769200	128769224	147	-7.33
CAediting_414656	chr5_72878640_+	ENSG00000128595.15	ENST00000479257	hsa-miR-4804-3p	128769835	128769842	8mer-1a	128769822	128769842	140	-14.24
CAediting_604450	chr7_133034877_-	ENSG00000128595.15	ENST00000479257	hsa-miR-3654	128769717	128769724	8mer-1a	128769706	128769724	140	-15.37
CAediting_1524209	chrX_134546392_-	ENSG00000128595.15	ENST00000535011	hsa-miR-503-5p	128770569	128770576	8mer-1a	128770554	128770576	159	-23.28
CAediting_1524209	chrX_134546392_-	ENSG00000128595.15	ENST00000542996	hsa-miR-503-5p	128770569	128770576	8mer-1a	128770554	128770576	159	-23.28
CAediting_1524209	chrX_134546392_-	ENSG00000128595.15	ENST00000449187	hsa-miR-503-5p	128770569	128770575	7mer-m8	128770554	128770575	159	-20.2

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000128595.15	ENST00000535011	hsa-miR-200b-3p	128770305	128770312	8mer-1a	128770290	128770312	153	-13.11
CAediting_228905	chr2_188297554_+	ENSG00000128595.15	ENST00000535011	hsa-miR-561-3p	128769260	128769266	7mer-m8	128769246	128769267	140	-4.44
CAediting_393	chr1_1167164_+	ENSG00000128595.15	ENST00000542996	hsa-miR-200b-3p	128770305	128770312	8mer-1a	128770290	128770312	153	-13.11
CAediting_228905	chr2_188297554_+	ENSG00000128595.15	ENST00000542996	hsa-miR-561-3p	128769260	128769266	7mer-m8	128769246	128769267	140	-4.44
CAediting_228905	chr2_188297554_+	ENSG00000128595.15	ENST00000449187	hsa-miR-561-3p	128769260	128769266	7mer-m8	128769246	128769267	140	-4.44
CAediting_228905	chr2_188297554_+	ENSG00000128595.15	ENST00000479257	hsa-miR-561-3p	128769260	128769266	7mer-m8	128769246	128769267	140	-4.44

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CALU

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for CALU

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for CALU

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for CALU

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for CALU

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CALU

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
CALU	C0004238	Atrial Fibrillation	1	CTD_human
CALU	C0027626	Neoplasm Invasiveness	1	CTD_human
CALU	C0235480	Paroxysmal atrial fibrillation	1	CTD_human
CALU	C2585653	Persistent atrial fibrillation	1	CTD_human
CALU	C3468561	familial atrial fibrillation	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene