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Editing gene: NPL (CAeditome ID:80896)

Gene summary for NPL

Gene summary

Gene information	Gene symbol	NPL
	Gene ID	80896
	Gene name	N-acetylneuraminate pyruvate lyase
	Synonyms	C112\|C1orf13\|NAL\|NPL1
	Cytomap	1q25.3
	Type of gene	protein-coding
	Description	N-acetylneuraminate lyaseN-acetylneuraminate pyruvate lyase (dihydrodipicolinate synthase)N-acetylneuraminic acid aldolaseNALasedihydrodipicolinate synthetase homolog 1sialate-pyruvate lyasesialic acid aldolase
	Modification date	20210518
	UniProtAcc	Q9BXD5
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for NPL

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000135838.12

RNA A-to-I editing events in Cancer.

CAediting_126493(182796826, +), CAediting_126494(182796888, +), CAediting_126495(182796929, +), CAediting_126496(182796984, +), CAediting_126497(182798321, +), CAediting_126498(182798322, +), CAediting_126499(182798373, +), CAediting_126500(182798377, +), CAediting_126501(182799642, +), CAediting_126502(182799666, +), CAediting_126503(182799678, +), CAediting_126504(182799684, +), CAediting_126505(182799707, +), CAediting_126506(182799716, +), CAediting_126507(182800142, +), CAediting_126508(182800146, +), CAediting_126509(182800147, +), CAediting_126510(182800165, +), CAediting_126511(182800172, +), CAediting_126512(182800174, +), CAediting_126513(182800180, +), CAediting_126514(182800181, +), CAediting_126515(182800207, +), CAediting_126516(182800211, +), CAediting_126517(182800235, +), CAediting_126518(182800237, +), CAediting_126519(182800240, +), CAediting_126520(182800257, +), CAediting_126521(182800258, +), CAediting_126522(182800273, +), CAediting_126523(182800274, +), CAediting_126524(182800276, +), CAediting_126525(182800280, +), CAediting_126526(182800285, +), CAediting_126527(182800315, +), CAediting_126528(182800336, +), CAediting_126529(182800338, +), CAediting_126530(182800343, +), CAediting_126531(182800345, +), CAediting_126532(182800351, +), CAediting_126533(182800356, +), CAediting_126534(182800366, +), CAediting_126535(182800381, +), CAediting_126536(182800388, +), CAediting_126537(182800396, +), CAediting_126538(182800406, +), CAediting_126539(182800418, +), CAediting_126540(182800420, +), CAediting_126541(182800423, +), CAediting_126542(182800424, +), CAediting_126543(182800833, +), CAediting_126544(182800844, +), CAediting_126545(182800872, +), CAediting_126546(182800910, +), CAediting_126547(182800927, +), CAediting_126548(182800939, +), CAediting_126549(182800950, +), CAediting_126550(182800964, +), CAediting_126551(182800965, +), CAediting_126552(182800973, +), CAediting_126553(182800982, +), CAediting_126554(182800992, +), CAediting_126555(182801004, +), CAediting_126556(182801010, +), CAediting_126557(182801578, +), CAediting_126558(182801588, +), CAediting_126559(182801594, +), CAediting_126560(182801595, +), CAediting_126561(182801725, +), CAediting_126562(182801738, +), CAediting_126563(182801743, +), CAediting_126564(182801782, +), CAediting_126565(182801792, +), CAediting_126566(182804198, +), CAediting_126567(182804229, +), CAediting_126568(182804232, +), CAediting_126569(182804258, +), CAediting_126570(182804350, +), CAediting_126571(182804367, +), CAediting_126572(182804390, +), CAediting_126573(182804402, +), CAediting_126574(182805135, +), CAediting_126575(182805168, +), CAediting_126576(182805284, +), CAediting_126577(182805311, +), CAediting_126578(182805316, +), CAediting_126579(182805320, +), CAediting_126580(182805346, +), CAediting_126581(182805352, +), CAediting_126582(182805414, +), CAediting_126583(182806861, +), CAediting_126584(182806863, +), CAediting_126585(182806908, +), CAediting_126586(182806942, +), CAediting_126587(182806943, +), CAediting_126588(182806968, +), CAediting_126589(182806978, +), CAediting_126590(182807004, +), CAediting_126591(182807005, +), CAediting_126592(182807045, +), CAediting_126593(182807081, +), CAediting_126594(182807099, +), CAediting_126595(182807100, +), CAediting_126596(182807112, +), CAediting_126597(182807121, +), CAediting_126598(182807621, +), CAediting_126599(182807644, +), CAediting_126600(182807657, +), CAediting_126601(182807660, +), CAediting_126602(182807665, +), CAediting_126603(182807689, +), CAediting_126604(182807699, +), CAediting_126605(182807770, +), CAediting_126606(182807776, +), CAediting_126607(182807780, +), CAediting_126608(182807800, +), CAediting_126609(182807803, +), CAediting_126610(182807841, +), CAediting_126611(182808683, +), CAediting_126612(182808699, +), CAediting_126613(182808700, +), CAediting_126614(182808705, +), CAediting_126615(182808721, +), CAediting_126616(182808722, +), CAediting_126617(182808730, +), CAediting_126618(182808739, +), CAediting_126619(182808740, +), CAediting_126620(182808753, +), CAediting_126621(182808769, +), CAediting_126622(182808812, +), CAediting_126623(182808820, +), CAediting_126624(182808822, +), CAediting_126625(182808828, +), CAediting_126626(182808844, +), CAediting_126627(182808848, +), CAediting_126628(182808865, +), CAediting_126629(182808874, +), CAediting_126630(182808879, +), CAediting_126631(182808892, +), CAediting_126632(182808911, +), CAediting_126633(182808949, +), CAediting_126634(182809275, +), CAediting_126635(182809283, +), CAediting_126636(182809284, +), CAediting_126637(182809314, +), CAediting_126638(182809324, +), CAediting_126639(182809329, +), CAediting_126640(182809352, +), CAediting_126641(182809362, +), CAediting_126642(182809363, +), CAediting_126643(182809380, +), CAediting_126644(182809387, +), CAediting_126645(182809388, +), CAediting_126646(182809389, +), CAediting_126647(182809390, +), CAediting_126648(182809391, +), CAediting_126649(182809393, +), CAediting_126650(182809401, +), CAediting_126651(182809419, +), CAediting_126652(182809420, +), CAediting_126653(182809430, +), CAediting_126654(182809433, +), CAediting_126655(182809441, +), CAediting_126656(182809442, +), CAediting_126657(182809449, +), CAediting_126658(182809455, +), CAediting_126659(182809461, +), CAediting_126660(182809481, +), CAediting_126661(182809497, +), CAediting_126662(182810972, +), CAediting_126663(182811346, +), CAediting_126664(182811357, +), CAediting_126665(182811438, +), CAediting_126666(182811467, +), CAediting_126667(182811489, +), CAediting_126668(182811503, +), CAediting_126669(182819326, +), CAediting_126670(182819406, +), CAediting_126671(182819561, +), CAediting_126672(182822890, +), CAediting_126673(182822936, +), CAediting_126674(182822969, +), CAediting_126675(182822986, +), CAediting_126676(182824543, +), CAediting_126677(182824703, +),

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RNA editing positional annotations for NPL using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_126493	chr1_182796826_+	ncRNA_intronic
CAediting_126494	chr1_182796888_+	ncRNA_intronic
CAediting_126495	chr1_182796929_+	ncRNA_intronic
CAediting_126496	chr1_182796984_+	ncRNA_intronic
CAediting_126497	chr1_182798321_+	ncRNA_intronic
CAediting_126498	chr1_182798322_+	ncRNA_intronic
CAediting_126499	chr1_182798373_+	ncRNA_intronic
CAediting_126500	chr1_182798377_+	ncRNA_intronic
CAediting_126501	chr1_182799642_+	ncRNA_intronic
CAediting_126502	chr1_182799666_+	ncRNA_intronic
CAediting_126503	chr1_182799678_+	ncRNA_intronic
CAediting_126504	chr1_182799684_+	ncRNA_intronic
CAediting_126505	chr1_182799707_+	ncRNA_intronic
CAediting_126506	chr1_182799716_+	ncRNA_intronic
CAediting_126507	chr1_182800142_+	ncRNA_intronic
CAediting_126508	chr1_182800146_+	ncRNA_intronic
CAediting_126509	chr1_182800147_+	ncRNA_intronic
CAediting_126510	chr1_182800165_+	ncRNA_intronic
CAediting_126511	chr1_182800172_+	ncRNA_intronic
CAediting_126512	chr1_182800174_+	ncRNA_intronic
CAediting_126513	chr1_182800180_+	ncRNA_intronic
CAediting_126514	chr1_182800181_+	ncRNA_intronic
CAediting_126515	chr1_182800207_+	ncRNA_intronic
CAediting_126516	chr1_182800211_+	ncRNA_intronic
CAediting_126517	chr1_182800235_+	ncRNA_intronic
CAediting_126518	chr1_182800237_+	ncRNA_intronic
CAediting_126519	chr1_182800240_+	ncRNA_intronic
CAediting_126520	chr1_182800257_+	ncRNA_intronic
CAediting_126521	chr1_182800258_+	ncRNA_intronic
CAediting_126522	chr1_182800273_+	ncRNA_intronic
CAediting_126523	chr1_182800274_+	ncRNA_intronic
CAediting_126524	chr1_182800276_+	ncRNA_intronic
CAediting_126525	chr1_182800280_+	ncRNA_intronic
CAediting_126526	chr1_182800285_+	ncRNA_intronic
CAediting_126527	chr1_182800315_+	ncRNA_intronic
CAediting_126528	chr1_182800336_+	ncRNA_intronic
CAediting_126529	chr1_182800338_+	ncRNA_intronic
CAediting_126530	chr1_182800343_+	ncRNA_intronic
CAediting_126531	chr1_182800345_+	ncRNA_intronic
CAediting_126532	chr1_182800351_+	ncRNA_intronic
CAediting_126533	chr1_182800356_+	ncRNA_intronic
CAediting_126534	chr1_182800366_+	ncRNA_intronic
CAediting_126535	chr1_182800381_+	ncRNA_intronic
CAediting_126536	chr1_182800388_+	ncRNA_intronic
CAediting_126537	chr1_182800396_+	ncRNA_intronic
CAediting_126538	chr1_182800406_+	ncRNA_intronic
CAediting_126539	chr1_182800418_+	ncRNA_intronic
CAediting_126540	chr1_182800420_+	ncRNA_intronic
CAediting_126541	chr1_182800423_+	ncRNA_intronic
CAediting_126542	chr1_182800424_+	ncRNA_intronic
CAediting_126543	chr1_182800833_+	ncRNA_intronic
CAediting_126544	chr1_182800844_+	ncRNA_intronic
CAediting_126545	chr1_182800872_+	ncRNA_intronic
CAediting_126546	chr1_182800910_+	ncRNA_intronic
CAediting_126547	chr1_182800927_+	ncRNA_intronic
CAediting_126548	chr1_182800939_+	ncRNA_intronic
CAediting_126549	chr1_182800950_+	ncRNA_intronic
CAediting_126550	chr1_182800964_+	ncRNA_intronic
CAediting_126551	chr1_182800965_+	ncRNA_intronic
CAediting_126552	chr1_182800973_+	ncRNA_intronic
CAediting_126553	chr1_182800982_+	ncRNA_intronic
CAediting_126554	chr1_182800992_+	ncRNA_intronic
CAediting_126555	chr1_182801004_+	ncRNA_intronic
CAediting_126556	chr1_182801010_+	ncRNA_intronic
CAediting_126557	chr1_182801578_+	ncRNA_intronic
CAediting_126558	chr1_182801588_+	ncRNA_intronic
CAediting_126559	chr1_182801594_+	ncRNA_intronic
CAediting_126560	chr1_182801595_+	ncRNA_intronic
CAediting_126561	chr1_182801725_+	ncRNA_intronic
CAediting_126562	chr1_182801738_+	ncRNA_intronic
CAediting_126563	chr1_182801743_+	ncRNA_intronic
CAediting_126564	chr1_182801782_+	ncRNA_intronic
CAediting_126565	chr1_182801792_+	ncRNA_intronic
CAediting_126566	chr1_182804198_+	ncRNA_intronic
CAediting_126567	chr1_182804229_+	ncRNA_intronic
CAediting_126568	chr1_182804232_+	ncRNA_intronic
CAediting_126569	chr1_182804258_+	ncRNA_intronic
CAediting_126570	chr1_182804350_+	ncRNA_intronic
CAediting_126571	chr1_182804367_+	ncRNA_intronic
CAediting_126572	chr1_182804390_+	ncRNA_intronic
CAediting_126573	chr1_182804402_+	ncRNA_intronic
CAediting_126574	chr1_182805135_+	ncRNA_intronic
CAediting_126575	chr1_182805168_+	ncRNA_intronic
CAediting_126576	chr1_182805284_+	ncRNA_intronic
CAediting_126577	chr1_182805311_+	ncRNA_intronic
CAediting_126578	chr1_182805316_+	ncRNA_intronic
CAediting_126579	chr1_182805320_+	ncRNA_intronic
CAediting_126580	chr1_182805346_+	ncRNA_intronic
CAediting_126581	chr1_182805352_+	ncRNA_intronic
CAediting_126582	chr1_182805414_+	ncRNA_intronic
CAediting_126583	chr1_182806861_+	ncRNA_intronic
CAediting_126584	chr1_182806863_+	ncRNA_intronic
CAediting_126585	chr1_182806908_+	ncRNA_intronic
CAediting_126586	chr1_182806942_+	ncRNA_intronic
CAediting_126587	chr1_182806943_+	ncRNA_intronic
CAediting_126588	chr1_182806968_+	ncRNA_intronic
CAediting_126589	chr1_182806978_+	ncRNA_intronic
CAediting_126590	chr1_182807004_+	ncRNA_intronic
CAediting_126591	chr1_182807005_+	ncRNA_intronic
CAediting_126592	chr1_182807045_+	ncRNA_intronic
CAediting_126593	chr1_182807081_+	ncRNA_intronic
CAediting_126594	chr1_182807099_+	ncRNA_intronic
CAediting_126595	chr1_182807100_+	ncRNA_intronic
CAediting_126596	chr1_182807112_+	ncRNA_intronic
CAediting_126597	chr1_182807121_+	ncRNA_intronic
CAediting_126598	chr1_182807621_+	ncRNA_intronic
CAediting_126599	chr1_182807644_+	ncRNA_intronic
CAediting_126600	chr1_182807657_+	ncRNA_intronic
CAediting_126601	chr1_182807660_+	ncRNA_intronic
CAediting_126602	chr1_182807665_+	ncRNA_intronic
CAediting_126603	chr1_182807689_+	ncRNA_intronic
CAediting_126604	chr1_182807699_+	ncRNA_intronic
CAediting_126605	chr1_182807770_+	ncRNA_intronic
CAediting_126606	chr1_182807776_+	ncRNA_intronic
CAediting_126607	chr1_182807780_+	ncRNA_intronic
CAediting_126608	chr1_182807800_+	ncRNA_intronic
CAediting_126609	chr1_182807803_+	ncRNA_intronic
CAediting_126610	chr1_182807841_+	ncRNA_intronic
CAediting_126611	chr1_182808683_+	ncRNA_intronic
CAediting_126612	chr1_182808699_+	ncRNA_intronic
CAediting_126613	chr1_182808700_+	ncRNA_intronic
CAediting_126614	chr1_182808705_+	ncRNA_intronic
CAediting_126615	chr1_182808721_+	ncRNA_intronic
CAediting_126616	chr1_182808722_+	ncRNA_intronic
CAediting_126617	chr1_182808730_+	ncRNA_intronic
CAediting_126618	chr1_182808739_+	ncRNA_intronic
CAediting_126619	chr1_182808740_+	ncRNA_intronic
CAediting_126620	chr1_182808753_+	ncRNA_intronic
CAediting_126621	chr1_182808769_+	ncRNA_intronic
CAediting_126622	chr1_182808812_+	ncRNA_intronic
CAediting_126623	chr1_182808820_+	ncRNA_intronic
CAediting_126624	chr1_182808822_+	ncRNA_intronic
CAediting_126625	chr1_182808828_+	ncRNA_intronic
CAediting_126626	chr1_182808844_+	ncRNA_intronic
CAediting_126627	chr1_182808848_+	ncRNA_intronic
CAediting_126628	chr1_182808865_+	ncRNA_intronic
CAediting_126629	chr1_182808874_+	ncRNA_intronic
CAediting_126630	chr1_182808879_+	ncRNA_intronic
CAediting_126631	chr1_182808892_+	ncRNA_intronic
CAediting_126632	chr1_182808911_+	ncRNA_intronic
CAediting_126633	chr1_182808949_+	ncRNA_intronic
CAediting_126634	chr1_182809275_+	ncRNA_exonic
CAediting_126635	chr1_182809283_+	ncRNA_exonic
CAediting_126636	chr1_182809284_+	ncRNA_exonic
CAediting_126637	chr1_182809314_+	ncRNA_intronic
CAediting_126638	chr1_182809324_+	ncRNA_intronic
CAediting_126639	chr1_182809329_+	ncRNA_intronic
CAediting_126640	chr1_182809352_+	ncRNA_intronic
CAediting_126641	chr1_182809362_+	ncRNA_intronic
CAediting_126642	chr1_182809363_+	ncRNA_intronic
CAediting_126643	chr1_182809380_+	ncRNA_intronic
CAediting_126644	chr1_182809387_+	ncRNA_intronic
CAediting_126645	chr1_182809388_+	ncRNA_intronic
CAediting_126646	chr1_182809389_+	ncRNA_intronic
CAediting_126647	chr1_182809390_+	ncRNA_intronic
CAediting_126648	chr1_182809391_+	ncRNA_intronic
CAediting_126649	chr1_182809393_+	ncRNA_intronic
CAediting_126650	chr1_182809401_+	ncRNA_intronic
CAediting_126651	chr1_182809419_+	ncRNA_intronic
CAediting_126652	chr1_182809420_+	ncRNA_intronic
CAediting_126653	chr1_182809430_+	ncRNA_intronic
CAediting_126654	chr1_182809433_+	ncRNA_intronic
CAediting_126655	chr1_182809441_+	ncRNA_intronic
CAediting_126656	chr1_182809442_+	ncRNA_intronic
CAediting_126657	chr1_182809449_+	ncRNA_intronic
CAediting_126658	chr1_182809455_+	ncRNA_intronic
CAediting_126659	chr1_182809461_+	ncRNA_intronic
CAediting_126660	chr1_182809481_+	ncRNA_intronic
CAediting_126661	chr1_182809497_+	ncRNA_intronic
CAediting_126662	chr1_182810972_+	ncRNA_intronic
CAediting_126663	chr1_182811346_+	ncRNA_intronic
CAediting_126664	chr1_182811357_+	ncRNA_intronic
CAediting_126665	chr1_182811438_+	ncRNA_intronic
CAediting_126666	chr1_182811467_+	ncRNA_intronic
CAediting_126667	chr1_182811489_+	ncRNA_intronic
CAediting_126668	chr1_182811503_+	ncRNA_intronic
CAediting_126669	chr1_182819326_+	ncRNA_intronic
CAediting_126670	chr1_182819406_+	ncRNA_intronic
CAediting_126671	chr1_182819561_+	ncRNA_intronic
CAediting_126672	chr1_182822890_+	ncRNA_intronic
CAediting_126673	chr1_182822936_+	ncRNA_intronic
CAediting_126674	chr1_182822969_+	ncRNA_intronic
CAediting_126675	chr1_182822986_+	ncRNA_intronic
CAediting_126676	chr1_182824543_+	ncRNA_intronic
CAediting_126677	chr1_182824703_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_126493	chr1_182796826_+	SINE	Alu	AluSc
CAediting_126494	chr1_182796888_+	SINE	Alu	AluSc
CAediting_126495	chr1_182796929_+	SINE	Alu	AluSc
CAediting_126496	chr1_182796984_+	SINE	Alu	AluSc
CAediting_126497	chr1_182798321_+	SINE	Alu	AluSz
CAediting_126498	chr1_182798322_+	SINE	Alu	AluSz
CAediting_126499	chr1_182798373_+	SINE	Alu	AluSz
CAediting_126500	chr1_182798377_+	SINE	Alu	AluSz
CAediting_126501	chr1_182799642_+	SINE	Alu	FLAM_A
CAediting_126502	chr1_182799666_+	SINE	Alu	FLAM_A
CAediting_126503	chr1_182799678_+	SINE	Alu	FLAM_A
CAediting_126504	chr1_182799684_+	SINE	Alu	FLAM_A
CAediting_126505	chr1_182799707_+	SINE	Alu	FLAM_A
CAediting_126506	chr1_182799716_+	SINE	Alu	FLAM_A
CAediting_126510	chr1_182800165_+	SINE	Alu	AluJb
CAediting_126511	chr1_182800172_+	SINE	Alu	AluJb
CAediting_126512	chr1_182800174_+	SINE	Alu	AluJb
CAediting_126513	chr1_182800180_+	SINE	Alu	AluJb
CAediting_126514	chr1_182800181_+	SINE	Alu	AluJb
CAediting_126515	chr1_182800207_+	SINE	Alu	AluJb
CAediting_126516	chr1_182800211_+	SINE	Alu	AluJb
CAediting_126517	chr1_182800235_+	SINE	Alu	AluJb
CAediting_126518	chr1_182800237_+	SINE	Alu	AluJb
CAediting_126519	chr1_182800240_+	SINE	Alu	AluJb
CAediting_126520	chr1_182800257_+	SINE	Alu	AluJb
CAediting_126521	chr1_182800258_+	SINE	Alu	AluJb
CAediting_126522	chr1_182800273_+	SINE	Alu	AluJb
CAediting_126523	chr1_182800274_+	SINE	Alu	AluJb
CAediting_126524	chr1_182800276_+	SINE	Alu	AluJb
CAediting_126525	chr1_182800280_+	SINE	Alu	AluJb
CAediting_126526	chr1_182800285_+	SINE	Alu	AluJb
CAediting_126527	chr1_182800315_+	SINE	Alu	AluJb
CAediting_126528	chr1_182800336_+	SINE	Alu	AluJb
CAediting_126529	chr1_182800338_+	SINE	Alu	AluJb
CAediting_126530	chr1_182800343_+	SINE	Alu	AluJb
CAediting_126531	chr1_182800345_+	SINE	Alu	AluJb
CAediting_126532	chr1_182800351_+	SINE	Alu	AluJb
CAediting_126533	chr1_182800356_+	SINE	Alu	AluJb
CAediting_126534	chr1_182800366_+	SINE	Alu	AluJb
CAediting_126535	chr1_182800381_+	SINE	Alu	AluJb
CAediting_126536	chr1_182800388_+	SINE	Alu	AluJb
CAediting_126537	chr1_182800396_+	SINE	Alu	AluJb
CAediting_126538	chr1_182800406_+	SINE	Alu	AluJb
CAediting_126539	chr1_182800418_+	SINE	Alu	AluJb
CAediting_126540	chr1_182800420_+	SINE	Alu	AluJb
CAediting_126541	chr1_182800423_+	SINE	Alu	AluJb
CAediting_126542	chr1_182800424_+	SINE	Alu	AluJb
CAediting_126543	chr1_182800833_+	SINE	Alu	AluSx1
CAediting_126544	chr1_182800844_+	SINE	Alu	AluSx1
CAediting_126545	chr1_182800872_+	SINE	Alu	AluSx1
CAediting_126546	chr1_182800910_+	SINE	Alu	AluSx1
CAediting_126547	chr1_182800927_+	SINE	Alu	AluSx1
CAediting_126548	chr1_182800939_+	SINE	Alu	AluSx1
CAediting_126549	chr1_182800950_+	SINE	Alu	AluSx1
CAediting_126550	chr1_182800964_+	SINE	Alu	AluSx1
CAediting_126551	chr1_182800965_+	SINE	Alu	AluSx1
CAediting_126552	chr1_182800973_+	SINE	Alu	AluSx1
CAediting_126553	chr1_182800982_+	SINE	Alu	AluSx1
CAediting_126554	chr1_182800992_+	SINE	Alu	AluSx1
CAediting_126555	chr1_182801004_+	SINE	Alu	AluSx1
CAediting_126556	chr1_182801010_+	SINE	Alu	AluSx1
CAediting_126557	chr1_182801578_+	SINE	Alu	AluJr4
CAediting_126558	chr1_182801588_+	SINE	Alu	AluJr4
CAediting_126559	chr1_182801594_+	SINE	Alu	AluJr4
CAediting_126560	chr1_182801595_+	SINE	Alu	AluJr4
CAediting_126561	chr1_182801725_+	SINE	Alu	AluJr4
CAediting_126562	chr1_182801738_+	SINE	Alu	AluJr4
CAediting_126563	chr1_182801743_+	SINE	Alu	AluJr4
CAediting_126564	chr1_182801782_+	SINE	Alu	AluJr4
CAediting_126565	chr1_182801792_+	SINE	Alu	AluJr4
CAediting_126566	chr1_182804198_+	SINE	Alu	AluSx
CAediting_126567	chr1_182804229_+	SINE	Alu	AluSx
CAediting_126568	chr1_182804232_+	SINE	Alu	AluSx
CAediting_126569	chr1_182804258_+	SINE	Alu	AluSx
CAediting_126570	chr1_182804350_+	SINE	Alu	AluSx
CAediting_126571	chr1_182804367_+	SINE	Alu	AluSx
CAediting_126572	chr1_182804390_+	SINE	Alu	AluSx
CAediting_126573	chr1_182804402_+	SINE	Alu	AluSx
CAediting_126575	chr1_182805168_+	SINE	Alu	AluSq2
CAediting_126576	chr1_182805284_+	SINE	Alu	AluSq2
CAediting_126577	chr1_182805311_+	SINE	Alu	AluSq2
CAediting_126578	chr1_182805316_+	SINE	Alu	AluSq2
CAediting_126579	chr1_182805320_+	SINE	Alu	AluSq2
CAediting_126580	chr1_182805346_+	SINE	Alu	AluSq2
CAediting_126581	chr1_182805352_+	SINE	Alu	AluSq2
CAediting_126582	chr1_182805414_+	SINE	Alu	AluSq2
CAediting_126583	chr1_182806861_+	SINE	Alu	AluSc8
CAediting_126584	chr1_182806863_+	SINE	Alu	AluSc8
CAediting_126585	chr1_182806908_+	SINE	Alu	AluSc8
CAediting_126586	chr1_182806942_+	SINE	Alu	AluSc8
CAediting_126587	chr1_182806943_+	SINE	Alu	AluSc8
CAediting_126588	chr1_182806968_+	SINE	Alu	AluSc8
CAediting_126589	chr1_182806978_+	SINE	Alu	AluSc8
CAediting_126590	chr1_182807004_+	SINE	Alu	AluSc8
CAediting_126591	chr1_182807005_+	SINE	Alu	AluSc8
CAediting_126592	chr1_182807045_+	SINE	Alu	AluSc8
CAediting_126593	chr1_182807081_+	SINE	Alu	AluSc8
CAediting_126594	chr1_182807099_+	SINE	Alu	AluSc8
CAediting_126595	chr1_182807100_+	SINE	Alu	AluSc8
CAediting_126596	chr1_182807112_+	SINE	Alu	AluSc8
CAediting_126597	chr1_182807121_+	SINE	Alu	AluSc8
CAediting_126598	chr1_182807621_+	SINE	Alu	AluY
CAediting_126599	chr1_182807644_+	SINE	Alu	AluY
CAediting_126600	chr1_182807657_+	SINE	Alu	AluY
CAediting_126601	chr1_182807660_+	SINE	Alu	AluY
CAediting_126602	chr1_182807665_+	SINE	Alu	AluY
CAediting_126603	chr1_182807689_+	SINE	Alu	AluY
CAediting_126604	chr1_182807699_+	SINE	Alu	AluY
CAediting_126605	chr1_182807770_+	SINE	Alu	AluY
CAediting_126606	chr1_182807776_+	SINE	Alu	AluY
CAediting_126607	chr1_182807780_+	SINE	Alu	AluY
CAediting_126608	chr1_182807800_+	SINE	Alu	AluY
CAediting_126609	chr1_182807803_+	SINE	Alu	AluY
CAediting_126610	chr1_182807841_+	SINE	Alu	AluY
CAediting_126611	chr1_182808683_+	SINE	Alu	AluJo
CAediting_126612	chr1_182808699_+	SINE	Alu	AluJo
CAediting_126613	chr1_182808700_+	SINE	Alu	AluJo
CAediting_126614	chr1_182808705_+	SINE	Alu	AluJo
CAediting_126615	chr1_182808721_+	SINE	Alu	AluJo
CAediting_126616	chr1_182808722_+	SINE	Alu	AluJo
CAediting_126617	chr1_182808730_+	SINE	Alu	AluJo
CAediting_126618	chr1_182808739_+	SINE	Alu	AluJo
CAediting_126619	chr1_182808740_+	SINE	Alu	AluJo
CAediting_126620	chr1_182808753_+	SINE	Alu	AluJo
CAediting_126621	chr1_182808769_+	SINE	Alu	AluJo
CAediting_126622	chr1_182808812_+	SINE	Alu	AluJo
CAediting_126623	chr1_182808820_+	SINE	Alu	AluJo
CAediting_126624	chr1_182808822_+	SINE	Alu	AluJo
CAediting_126625	chr1_182808828_+	SINE	Alu	AluJo
CAediting_126626	chr1_182808844_+	SINE	Alu	AluJo
CAediting_126627	chr1_182808848_+	SINE	Alu	AluJo
CAediting_126628	chr1_182808865_+	SINE	Alu	AluJo
CAediting_126629	chr1_182808874_+	SINE	Alu	AluJo
CAediting_126630	chr1_182808879_+	SINE	Alu	AluJo
CAediting_126631	chr1_182808892_+	SINE	Alu	AluJo
CAediting_126632	chr1_182808911_+	SINE	Alu	AluJo
CAediting_126633	chr1_182808949_+	SINE	Alu	AluJo
CAediting_126634	chr1_182809275_+	SINE	Alu	AluSx1
CAediting_126635	chr1_182809283_+	SINE	Alu	AluSx1
CAediting_126636	chr1_182809284_+	SINE	Alu	AluSx1
CAediting_126637	chr1_182809314_+	SINE	Alu	AluSx1
CAediting_126638	chr1_182809324_+	SINE	Alu	AluSx1
CAediting_126639	chr1_182809329_+	SINE	Alu	AluSx1
CAediting_126640	chr1_182809352_+	SINE	Alu	AluSx1
CAediting_126641	chr1_182809362_+	SINE	Alu	AluSx1
CAediting_126642	chr1_182809363_+	SINE	Alu	AluSx1
CAediting_126643	chr1_182809380_+	SINE	Alu	AluSx1
CAediting_126644	chr1_182809387_+	SINE	Alu	AluSx1
CAediting_126645	chr1_182809388_+	SINE	Alu	AluSx1
CAediting_126646	chr1_182809389_+	SINE	Alu	AluSx1
CAediting_126647	chr1_182809390_+	SINE	Alu	AluSx1
CAediting_126648	chr1_182809391_+	SINE	Alu	AluSx1
CAediting_126649	chr1_182809393_+	SINE	Alu	AluSx1
CAediting_126650	chr1_182809401_+	SINE	Alu	AluSx1
CAediting_126651	chr1_182809419_+	SINE	Alu	AluSx1
CAediting_126652	chr1_182809420_+	SINE	Alu	AluSx1
CAediting_126653	chr1_182809430_+	SINE	Alu	AluSx1
CAediting_126654	chr1_182809433_+	SINE	Alu	AluSx1
CAediting_126655	chr1_182809441_+	SINE	Alu	AluSx1
CAediting_126656	chr1_182809442_+	SINE	Alu	AluSx1
CAediting_126657	chr1_182809449_+	SINE	Alu	AluSx1
CAediting_126658	chr1_182809455_+	SINE	Alu	AluSx1
CAediting_126659	chr1_182809461_+	SINE	Alu	AluSx1
CAediting_126660	chr1_182809481_+	SINE	Alu	AluSx1
CAediting_126661	chr1_182809497_+	SINE	Alu	AluSx1
CAediting_126662	chr1_182810972_+	SINE	MIR	MIR
CAediting_126663	chr1_182811346_+	SINE	Alu	AluSx3
CAediting_126664	chr1_182811357_+	SINE	Alu	AluSx3
CAediting_126665	chr1_182811438_+	SINE	Alu	AluSx3
CAediting_126666	chr1_182811467_+	SINE	Alu	AluSx3
CAediting_126667	chr1_182811489_+	SINE	Alu	AluSx3
CAediting_126668	chr1_182811503_+	SINE	Alu	AluSx3
CAediting_126669	chr1_182819326_+	SINE	Alu	AluSq4
CAediting_126670	chr1_182819406_+	SINE	Alu	AluSq4
CAediting_126671	chr1_182819561_+	SINE	Alu	AluSx1
CAediting_126672	chr1_182822890_+	SINE	Alu	AluJr
CAediting_126673	chr1_182822936_+	SINE	Alu	AluJr
CAediting_126674	chr1_182822969_+	SINE	Alu	AluJr
CAediting_126675	chr1_182822986_+	SINE	Alu	AluJr
CAediting_126676	chr1_182824543_+	SINE	Alu	AluY
CAediting_126677	chr1_182824703_+	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for NPL

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135838.12.NPL.

Correlation between RNA A-to-I editing and PSI for ENSG00000135838.12.NPL.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for NPL

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for NPL

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NPL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000135838.12	ENST00000367554	hsa-miR-4477b	182830216	182830222	7mer-m8	182830203	182830223	156	-12.67
CAediting_688080	chr9_63819626_+	ENSG00000135838.12	ENST00000367555	hsa-miR-4477b	182830216	182830222	7mer-m8	182830203	182830223	156	-12.67
CAediting_688080	chr9_63819626_+	ENSG00000135838.12	ENST00000258317	hsa-miR-4477b	182830216	182830222	7mer-m8	182830203	182830223	156	-12.67
CAediting_688080	chr9_63819626_+	ENSG00000135838.12	ENST00000614468	hsa-miR-4477b	182830216	182830222	7mer-m8	182830203	182830223	156	-12.67
CAediting_1351755	chr19_40282625_-	ENSG00000135838.12	ENST00000367554	hsa-miR-641	182829369	182829376	8mer-1a	182829355	182829376	151	-13.53
CAediting_1368054	chr19_46709310_-	ENSG00000135838.12	ENST00000367554	hsa-miR-320e	182829399	182829406	8mer-1a	182829388	182829406	141	-16.74
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367554	hsa-miR-561-3p	182829085	182829092	8mer-1a	182829071	182829092	159	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367554	hsa-miR-561-3p	182829319	182829325	7mer-m8	182829302	182829326	146	-17
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367554	hsa-miR-561-3p	182829000	182829006	7mer-m8	182828982	182829007	151	-9.69
CAediting_1351755	chr19_40282625_-	ENSG00000135838.12	ENST00000367553	hsa-miR-641	182829369	182829376	8mer-1a	182829355	182829376	151	-13.53
CAediting_1368054	chr19_46709310_-	ENSG00000135838.12	ENST00000367553	hsa-miR-320e	182829399	182829406	8mer-1a	182829388	182829406	141	-16.74
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367553	hsa-miR-561-3p	182829085	182829092	8mer-1a	182829071	182829092	159	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367553	hsa-miR-561-3p	182829319	182829325	7mer-m8	182829302	182829326	146	-17
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367553	hsa-miR-561-3p	182829000	182829006	7mer-m8	182828982	182829007	151	-9.69
CAediting_1351755	chr19_40282625_-	ENSG00000135838.12	ENST00000258317	hsa-miR-641	182829369	182829376	8mer-1a	182829355	182829376	151	-13.53
CAediting_1368054	chr19_46709310_-	ENSG00000135838.12	ENST00000258317	hsa-miR-320e	182829399	182829406	8mer-1a	182829388	182829406	141	-16.74
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000258317	hsa-miR-561-3p	182829085	182829092	8mer-1a	182829071	182829092	159	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000258317	hsa-miR-561-3p	182829319	182829325	7mer-m8	182829302	182829326	146	-17
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000258317	hsa-miR-561-3p	182829000	182829006	7mer-m8	182828982	182829007	151	-9.69
CAediting_1351755	chr19_40282625_-	ENSG00000135838.12	ENST00000614468	hsa-miR-641	182829369	182829376	8mer-1a	182829355	182829376	151	-13.53
CAediting_1368054	chr19_46709310_-	ENSG00000135838.12	ENST00000614468	hsa-miR-320e	182829399	182829406	8mer-1a	182829388	182829406	141	-16.74
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000614468	hsa-miR-561-3p	182829000	182829006	7mer-m8	182828982	182829007	151	-9.69
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000614468	hsa-miR-561-3p	182829085	182829092	8mer-1a	182829071	182829092	159	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000614468	hsa-miR-561-3p	182829319	182829325	7mer-m8	182829302	182829326	146	-17

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367554	hsa-miR-561-3p	182830112	182830118	7mer-m8	182830100	182830119	144	-3.7
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367554	hsa-miR-561-3p	182829836	182829841	6mer	182829821	182829842	141	-10.51
CAediting_468389	chr6_31355314_-	ENSG00000135838.12	ENST00000367554	hsa-miR-6891-5p	182829851	182829857	7mer-m8	182829839	182829858	146	-23.4
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367553	hsa-miR-561-3p	182830112	182830118	7mer-m8	182830100	182830119	144	-3.7
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000367553	hsa-miR-561-3p	182829836	182829841	6mer	182829821	182829842	141	-10.51
CAediting_468389	chr6_31355314_-	ENSG00000135838.12	ENST00000367553	hsa-miR-6891-5p	182829851	182829857	7mer-m8	182829839	182829858	146	-23.4
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000258317	hsa-miR-561-3p	182830112	182830118	7mer-m8	182830100	182830119	144	-3.7
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000258317	hsa-miR-561-3p	182829836	182829841	6mer	182829821	182829842	141	-10.51
CAediting_468389	chr6_31355314_-	ENSG00000135838.12	ENST00000258317	hsa-miR-6891-5p	182829851	182829857	7mer-m8	182829839	182829858	146	-23.4
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000614468	hsa-miR-561-3p	182829836	182829841	6mer	182829821	182829842	141	-10.51
CAediting_228905	chr2_188297554_+	ENSG00000135838.12	ENST00000614468	hsa-miR-561-3p	182830112	182830118	7mer-m8	182830100	182830119	144	-3.7
CAediting_468389	chr6_31355314_-	ENSG00000135838.12	ENST00000614468	hsa-miR-6891-5p	182829851	182829857	7mer-m8	182829839	182829858	146	-23.4

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NPL

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000463899.4	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_126634	ENST00000463899.4	chr1_182809275_+	-692.70	-693.10	-692.70
CAediting_126635	ENST00000463899.4	chr1_182809283_+	-693.40	-693.10	-692.70
CAediting_126636	ENST00000463899.4	chr1_182809284_+	-693.10	-693.10	-692.70

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Relation with ADAR for NPL

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for NPL

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for NPL

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_126532	chr1_182800351_+	0.0327293091772107	0.0234796	22.2289

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RelatedDrugs for NPL

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NPL

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NPL	C0008370	Cholestasis	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene