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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: ZNF34 (CAeditome ID:80778) |
Gene summary for ZNF34 |
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Gene information | Gene symbol | ZNF34 | Gene ID | 80778 |
Gene name | zinc finger protein 34 | |
Synonyms | KOX32 | |
Cytomap | 8q24.3 | |
Type of gene | protein-coding | |
Description | zinc finger protein 34zinc finger protein 34 (KOX 32)zinc finger protein KOX32 | |
Modification date | 20210518 | |
UniProtAcc | Q8IZ26 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
ZNF34 | GO:0005654 | Zinc finger protein 34 | 0000052 |
ZNF34 | GO:0005829 | Zinc finger protein 34 | 0000052 |
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RNA A-to-I events for ZNF34 |
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CAediting_672614(144773424, -), CAediting_672615(144773446, -), CAediting_672616(144780902, -), CAediting_672617(144784663, -), CAediting_672618(144786014, -), CAediting_672619(144786015, -), CAediting_672620(144786052, -), CAediting_672621(144786057, -), CAediting_672622(144786068, -), CAediting_672623(144786074, -), CAediting_672624(144786096, -), CAediting_672625(144786117, -), CAediting_672626(144786123, -), CAediting_672627(144786136, -), CAediting_672628(144786149, -), CAediting_672629(144786181, -), CAediting_672630(144786187, -), CAediting_672631(144786220, -), CAediting_672632(144786223, -), CAediting_672633(144786262, -), CAediting_672634(144786270, -), CAediting_672635(144786280, -), CAediting_672636(144786377, -), CAediting_672637(144786379, -), CAediting_672638(144786391, -), CAediting_672639(144786442, -), CAediting_672640(144786451, -), CAediting_672641(144786490, -), CAediting_672642(144786499, -), CAediting_672643(144786510, -), CAediting_672644(144786512, -), CAediting_672645(144786534, -), CAediting_672646(144786576, -), CAediting_672647(144786587, -), CAediting_672648(144786595, -), CAediting_672649(144786630, -), CAediting_672650(144786632, -), |
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RNA editing positional annotations for ZNF34 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_672614 | chr8_144773424_- | exonic |
CAediting_672615 | chr8_144773446_- | exonic |
CAediting_672616 | chr8_144780902_- | ncRNA_intronic |
CAediting_672617 | chr8_144784663_- | ncRNA_intronic |
CAediting_672618 | chr8_144786014_- | ncRNA_intronic |
CAediting_672619 | chr8_144786015_- | ncRNA_intronic |
CAediting_672620 | chr8_144786052_- | ncRNA_intronic |
CAediting_672621 | chr8_144786057_- | ncRNA_intronic |
CAediting_672622 | chr8_144786068_- | ncRNA_intronic |
CAediting_672623 | chr8_144786074_- | ncRNA_intronic |
CAediting_672624 | chr8_144786096_- | ncRNA_intronic |
CAediting_672625 | chr8_144786117_- | ncRNA_intronic |
CAediting_672626 | chr8_144786123_- | ncRNA_intronic |
CAediting_672627 | chr8_144786136_- | ncRNA_intronic |
CAediting_672628 | chr8_144786149_- | ncRNA_intronic |
CAediting_672629 | chr8_144786181_- | ncRNA_intronic |
CAediting_672630 | chr8_144786187_- | ncRNA_intronic |
CAediting_672631 | chr8_144786220_- | ncRNA_intronic |
CAediting_672632 | chr8_144786223_- | ncRNA_intronic |
CAediting_672633 | chr8_144786262_- | ncRNA_intronic |
CAediting_672634 | chr8_144786270_- | ncRNA_intronic |
CAediting_672635 | chr8_144786280_- | ncRNA_intronic |
CAediting_672636 | chr8_144786377_- | ncRNA_intronic |
CAediting_672637 | chr8_144786379_- | ncRNA_intronic |
CAediting_672638 | chr8_144786391_- | ncRNA_intronic |
CAediting_672639 | chr8_144786442_- | ncRNA_intronic |
CAediting_672640 | chr8_144786451_- | ncRNA_intronic |
CAediting_672641 | chr8_144786490_- | ncRNA_intronic |
CAediting_672642 | chr8_144786499_- | ncRNA_intronic |
CAediting_672643 | chr8_144786510_- | ncRNA_intronic |
CAediting_672644 | chr8_144786512_- | ncRNA_intronic |
CAediting_672645 | chr8_144786534_- | ncRNA_intronic |
CAediting_672646 | chr8_144786576_- | ncRNA_intronic |
CAediting_672647 | chr8_144786587_- | ncRNA_intronic |
CAediting_672648 | chr8_144786595_- | ncRNA_intronic |
CAediting_672649 | chr8_144786630_- | ncRNA_intronic |
CAediting_672650 | chr8_144786632_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_672616 | chr8_144780902_- | SINE | Alu | AluY |
CAediting_672617 | chr8_144784663_- | SINE | Alu | AluSg4 |
CAediting_672618 | chr8_144786014_- | SINE | Alu | AluY |
CAediting_672619 | chr8_144786015_- | SINE | Alu | AluY |
CAediting_672620 | chr8_144786052_- | SINE | Alu | AluY |
CAediting_672621 | chr8_144786057_- | SINE | Alu | AluY |
CAediting_672622 | chr8_144786068_- | SINE | Alu | AluY |
CAediting_672623 | chr8_144786074_- | SINE | Alu | AluY |
CAediting_672624 | chr8_144786096_- | SINE | Alu | AluY |
CAediting_672625 | chr8_144786117_- | SINE | Alu | AluY |
CAediting_672626 | chr8_144786123_- | SINE | Alu | AluY |
CAediting_672627 | chr8_144786136_- | SINE | Alu | AluY |
CAediting_672628 | chr8_144786149_- | SINE | Alu | AluY |
CAediting_672629 | chr8_144786181_- | SINE | Alu | AluY |
CAediting_672630 | chr8_144786187_- | SINE | Alu | AluY |
CAediting_672631 | chr8_144786220_- | SINE | Alu | AluY |
CAediting_672632 | chr8_144786223_- | SINE | Alu | AluY |
CAediting_672633 | chr8_144786262_- | SINE | Alu | AluY |
CAediting_672634 | chr8_144786270_- | SINE | Alu | AluY |
CAediting_672635 | chr8_144786280_- | SINE | Alu | AluY |
CAediting_672636 | chr8_144786377_- | SINE | Alu | AluSx1 |
CAediting_672637 | chr8_144786379_- | SINE | Alu | AluSx1 |
CAediting_672638 | chr8_144786391_- | SINE | Alu | AluSx1 |
CAediting_672639 | chr8_144786442_- | SINE | Alu | AluSx1 |
CAediting_672640 | chr8_144786451_- | SINE | Alu | AluSx1 |
CAediting_672641 | chr8_144786490_- | SINE | Alu | AluSx1 |
CAediting_672642 | chr8_144786499_- | SINE | Alu | AluSx1 |
CAediting_672643 | chr8_144786510_- | SINE | Alu | AluSx1 |
CAediting_672644 | chr8_144786512_- | SINE | Alu | AluSx1 |
CAediting_672645 | chr8_144786534_- | SINE | Alu | AluSx1 |
CAediting_672646 | chr8_144786576_- | SINE | Alu | AluSx1 |
CAediting_672647 | chr8_144786587_- | SINE | Alu | AluSx1 |
CAediting_672648 | chr8_144786595_- | SINE | Alu | AluSx1 |
CAediting_672649 | chr8_144786630_- | SINE | Alu | AluSx1 |
CAediting_672650 | chr8_144786632_- | SINE | Alu | AluSx1 |
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RNA A-to-I editing events in the alternative splicing sites for ZNF34 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF34 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for ZNF34 |
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The effects of the RNA editing to the miRNA binding sites for ZNF34 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_604450 | chr7_133034877_- | ENSG00000196378.10 | ENST00000343459 | hsa-miR-3654 | 144773234 | 144773240 | 7mer-m8 | 144773233 | 144773251 | 140 | -18.16 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for ZNF34 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ZNF34 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for ZNF34 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for ZNF34 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for ZNF34 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF34 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |