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Editing gene: PTP4A2 (CAeditome ID:8073)

Gene summary for PTP4A2

Gene summary

Gene information	Gene symbol	PTP4A2
	Gene ID	8073
	Gene name	protein tyrosine phosphatase 4A2
	Synonyms	HH13\|HH7-2\|HU-PP-1\|OV-1\|PRL-2\|PRL2\|PTP4A\|PTPCAAX2\|ptp-IV1a\|ptp-IV1b
	Cytomap	1p35.2
	Type of gene	protein-coding
	Description	protein tyrosine phosphatase type IVA 2PTP(CAAXII)phosphatase of regenerating liver 2protein tyrosine phosphatase IVAprotein tyrosine phosphatase IVA2protein tyrosine phosphatase type IVA, member 2protein-tyrosine phosphatase of regenerating liver 2
	Modification date	20210518
	UniProtAcc	Q12974
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
PTP4A2	GO:0005737	Protein tyrosine phosphatase type IVA 2	10940933

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RNA A-to-I events for PTP4A2

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000184007.16

RNA A-to-I editing events in Cancer.

CAediting_37776(31909528, -), CAediting_37777(31909589, -), CAediting_37778(31909626, -), CAediting_37779(31910398, -), CAediting_37780(31910446, -), CAediting_37781(31914318, -), CAediting_37782(31915390, -), CAediting_37783(31915417, -), CAediting_37784(31915427, -), CAediting_37785(31915465, -), CAediting_37786(31915469, -), CAediting_37787(31915501, -), CAediting_37788(31915503, -), CAediting_37789(31915632, -), CAediting_37790(31915637, -), CAediting_37791(31915642, -), CAediting_37792(31915655, -), CAediting_37793(31915696, -), CAediting_37794(31915753, -), CAediting_37795(31915759, -), CAediting_37796(31915806, -), CAediting_37797(31915808, -), CAediting_37798(31915822, -), CAediting_37799(31919854, -), CAediting_37800(31919861, -), CAediting_37801(31919870, -), CAediting_37802(31919876, -), CAediting_37803(31919892, -), CAediting_37804(31919915, -), CAediting_37805(31919923, -), CAediting_37806(31919944, -), CAediting_37807(31919961, -), CAediting_37808(31919964, -), CAediting_37809(31919978, -), CAediting_37810(31920026, -), CAediting_37811(31920043, -), CAediting_37812(31920066, -), CAediting_37813(31920171, -), CAediting_37814(31920181, -), CAediting_37815(31920281, -), CAediting_37816(31920287, -), CAediting_37817(31920343, -), CAediting_37818(31920360, -), CAediting_37819(31920361, -), CAediting_37820(31920397, -), CAediting_37821(31920438, -), CAediting_37822(31920567, -), CAediting_37823(31920605, -), CAediting_37824(31920675, -), CAediting_37825(31920711, -), CAediting_37826(31920713, -), CAediting_37827(31920715, -), CAediting_37828(31920716, -), CAediting_37829(31920717, -), CAediting_37830(31920720, -), CAediting_37831(31920732, -), CAediting_37832(31920741, -), CAediting_37833(31920765, -), CAediting_37834(31920770, -), CAediting_37835(31920775, -), CAediting_37836(31920784, -), CAediting_37837(31920788, -), CAediting_37838(31920810, -), CAediting_37839(31920824, -), CAediting_37840(31920833, -), CAediting_37841(31922228, -), CAediting_37842(31922232, -), CAediting_37843(31922240, -), CAediting_37844(31922241, -), CAediting_37845(31922262, -), CAediting_37846(31922279, -), CAediting_37847(31922318, -), CAediting_37848(31922335, -), CAediting_37849(31922338, -), CAediting_37850(31922345, -), CAediting_37851(31922348, -), CAediting_37852(31922359, -), CAediting_37853(31922363, -), CAediting_37854(31922371, -), CAediting_37855(31922374, -), CAediting_37856(31922383, -), CAediting_37857(31922397, -), CAediting_37858(31922400, -), CAediting_37859(31922401, -), CAediting_37860(31922407, -), CAediting_37861(31922420, -), CAediting_37862(31922437, -), CAediting_37863(31922439, -), CAediting_37864(31922457, -), CAediting_37865(31922478, -), CAediting_37866(31922480, -), CAediting_37867(31922686, -), CAediting_37868(31922712, -), CAediting_37869(31922725, -), CAediting_37870(31922752, -), CAediting_37871(31922760, -), CAediting_37872(31922798, -), CAediting_37873(31922800, -), CAediting_37874(31922821, -), CAediting_37875(31922826, -), CAediting_37876(31922845, -), CAediting_37877(31922846, -), CAediting_37878(31922849, -), CAediting_37879(31922888, -), CAediting_37880(31922889, -), CAediting_37881(31922894, -), CAediting_37882(31922895, -), CAediting_37883(31922961, -), CAediting_37884(31922962, -), CAediting_37885(31922970, -), CAediting_37886(31923008, -), CAediting_37887(31923024, -), CAediting_37888(31923028, -), CAediting_37889(31923029, -), CAediting_37890(31923053, -), CAediting_37891(31923069, -), CAediting_37892(31923070, -), CAediting_37893(31923083, -), CAediting_37894(31923086, -), CAediting_37895(31923095, -), CAediting_37896(31923106, -), CAediting_37897(31923107, -), CAediting_37898(31923127, -), CAediting_37899(31923129, -), CAediting_37900(31923138, -), CAediting_37901(31923143, -), CAediting_37902(31923146, -), CAediting_37903(31923151, -), CAediting_37904(31923160, -), CAediting_37905(31923165, -), CAediting_37906(31923173, -), CAediting_37907(31923176, -), CAediting_37908(31923214, -), CAediting_37909(31923215, -), CAediting_37910(31923219, -), CAediting_37911(31923236, -), CAediting_37912(31923237, -), CAediting_37913(31923242, -), CAediting_37914(31923264, -), CAediting_37915(31923267, -), CAediting_37916(31923296, -), CAediting_37917(31923299, -), CAediting_37918(31923655, -), CAediting_37919(31923667, -), CAediting_37920(31923671, -), CAediting_37921(31923677, -), CAediting_37922(31923687, -), CAediting_37923(31923704, -), CAediting_37924(31923727, -), CAediting_37925(31923752, -), CAediting_37926(31923755, -), CAediting_37927(31923760, -), CAediting_37928(31923777, -), CAediting_37929(31923778, -), CAediting_37930(31923779, -), CAediting_37931(31923787, -), CAediting_37932(31923820, -), CAediting_37933(31925510, -), CAediting_37934(31925570, -), CAediting_37935(31925612, -), CAediting_37936(31925628, -), CAediting_37937(31925648, -), CAediting_37938(31925651, -), CAediting_37939(31925652, -), CAediting_37940(31925903, -), CAediting_37941(31934110, -), CAediting_37942(31934115, -), CAediting_37943(31934137, -), CAediting_37944(31934175, -), CAediting_37945(31934211, -), CAediting_37946(31934212, -), CAediting_37947(31934232, -), CAediting_37948(31934258, -), CAediting_37949(31935887, -), CAediting_37950(31935903, -), CAediting_37951(31935905, -), CAediting_37952(31935910, -), CAediting_37953(31935927, -), CAediting_37954(31935933, -), CAediting_37955(31935946, -), CAediting_37956(31935990, -), CAediting_37957(31935992, -), CAediting_37958(31936016, -), CAediting_37959(31936035, -), CAediting_37960(31936039, -), CAediting_37961(31936061, -), CAediting_37962(31936062, -), CAediting_37963(31936194, -), CAediting_37964(31936247, -), CAediting_37965(31936314, -), CAediting_37966(31936322, -), CAediting_37967(31936327, -), CAediting_37968(31936339, -), CAediting_37969(31936352, -), CAediting_37970(31936356, -), CAediting_37971(31936357, -),

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RNA editing positional annotations for PTP4A2 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_37776	chr1_31909528_-	ncRNA_intronic
CAediting_37777	chr1_31909589_-	ncRNA_intronic
CAediting_37778	chr1_31909626_-	ncRNA_intronic
CAediting_37779	chr1_31910398_-	ncRNA_exonic
CAediting_37780	chr1_31910446_-	ncRNA_exonic
CAediting_37781	chr1_31914318_-	ncRNA_intronic
CAediting_37782	chr1_31915390_-	ncRNA_intronic
CAediting_37783	chr1_31915417_-	ncRNA_intronic
CAediting_37784	chr1_31915427_-	ncRNA_intronic
CAediting_37785	chr1_31915465_-	ncRNA_intronic
CAediting_37786	chr1_31915469_-	ncRNA_intronic
CAediting_37787	chr1_31915501_-	ncRNA_intronic
CAediting_37788	chr1_31915503_-	ncRNA_intronic
CAediting_37789	chr1_31915632_-	ncRNA_exonic
CAediting_37790	chr1_31915637_-	ncRNA_exonic
CAediting_37791	chr1_31915642_-	ncRNA_exonic
CAediting_37792	chr1_31915655_-	ncRNA_exonic
CAediting_37793	chr1_31915696_-	ncRNA_exonic
CAediting_37794	chr1_31915753_-	ncRNA_exonic
CAediting_37795	chr1_31915759_-	ncRNA_exonic
CAediting_37796	chr1_31915806_-	ncRNA_exonic
CAediting_37797	chr1_31915808_-	ncRNA_exonic
CAediting_37798	chr1_31915822_-	ncRNA_exonic
CAediting_37799	chr1_31919854_-	ncRNA_intronic
CAediting_37800	chr1_31919861_-	ncRNA_intronic
CAediting_37801	chr1_31919870_-	ncRNA_intronic
CAediting_37802	chr1_31919876_-	ncRNA_intronic
CAediting_37803	chr1_31919892_-	ncRNA_intronic
CAediting_37804	chr1_31919915_-	ncRNA_intronic
CAediting_37805	chr1_31919923_-	ncRNA_intronic
CAediting_37806	chr1_31919944_-	ncRNA_intronic
CAediting_37807	chr1_31919961_-	ncRNA_intronic
CAediting_37808	chr1_31919964_-	ncRNA_intronic
CAediting_37809	chr1_31919978_-	ncRNA_intronic
CAediting_37810	chr1_31920026_-	ncRNA_intronic
CAediting_37811	chr1_31920043_-	ncRNA_intronic
CAediting_37812	chr1_31920066_-	ncRNA_intronic
CAediting_37813	chr1_31920171_-	ncRNA_intronic
CAediting_37814	chr1_31920181_-	ncRNA_intronic
CAediting_37815	chr1_31920281_-	ncRNA_intronic
CAediting_37816	chr1_31920287_-	ncRNA_intronic
CAediting_37817	chr1_31920343_-	ncRNA_intronic
CAediting_37818	chr1_31920360_-	ncRNA_intronic
CAediting_37819	chr1_31920361_-	ncRNA_intronic
CAediting_37820	chr1_31920397_-	ncRNA_intronic
CAediting_37821	chr1_31920438_-	ncRNA_intronic
CAediting_37822	chr1_31920567_-	ncRNA_intronic
CAediting_37823	chr1_31920605_-	ncRNA_intronic
CAediting_37824	chr1_31920675_-	ncRNA_intronic
CAediting_37825	chr1_31920711_-	ncRNA_intronic
CAediting_37826	chr1_31920713_-	ncRNA_intronic
CAediting_37827	chr1_31920715_-	ncRNA_intronic
CAediting_37828	chr1_31920716_-	ncRNA_intronic
CAediting_37829	chr1_31920717_-	ncRNA_intronic
CAediting_37830	chr1_31920720_-	ncRNA_intronic
CAediting_37831	chr1_31920732_-	ncRNA_intronic
CAediting_37832	chr1_31920741_-	ncRNA_intronic
CAediting_37833	chr1_31920765_-	ncRNA_intronic
CAediting_37834	chr1_31920770_-	ncRNA_intronic
CAediting_37835	chr1_31920775_-	ncRNA_intronic
CAediting_37836	chr1_31920784_-	ncRNA_intronic
CAediting_37837	chr1_31920788_-	ncRNA_intronic
CAediting_37838	chr1_31920810_-	ncRNA_intronic
CAediting_37839	chr1_31920824_-	ncRNA_intronic
CAediting_37840	chr1_31920833_-	ncRNA_intronic
CAediting_37841	chr1_31922228_-	ncRNA_intronic
CAediting_37842	chr1_31922232_-	ncRNA_intronic
CAediting_37843	chr1_31922240_-	ncRNA_intronic
CAediting_37844	chr1_31922241_-	ncRNA_intronic
CAediting_37845	chr1_31922262_-	ncRNA_intronic
CAediting_37846	chr1_31922279_-	ncRNA_intronic
CAediting_37847	chr1_31922318_-	ncRNA_intronic
CAediting_37848	chr1_31922335_-	ncRNA_intronic
CAediting_37849	chr1_31922338_-	ncRNA_intronic
CAediting_37850	chr1_31922345_-	ncRNA_intronic
CAediting_37851	chr1_31922348_-	ncRNA_intronic
CAediting_37852	chr1_31922359_-	ncRNA_intronic
CAediting_37853	chr1_31922363_-	ncRNA_intronic
CAediting_37854	chr1_31922371_-	ncRNA_intronic
CAediting_37855	chr1_31922374_-	ncRNA_intronic
CAediting_37856	chr1_31922383_-	ncRNA_intronic
CAediting_37857	chr1_31922397_-	ncRNA_intronic
CAediting_37858	chr1_31922400_-	ncRNA_intronic
CAediting_37859	chr1_31922401_-	ncRNA_intronic
CAediting_37860	chr1_31922407_-	ncRNA_intronic
CAediting_37861	chr1_31922420_-	ncRNA_intronic
CAediting_37862	chr1_31922437_-	ncRNA_intronic
CAediting_37863	chr1_31922439_-	ncRNA_intronic
CAediting_37864	chr1_31922457_-	ncRNA_intronic
CAediting_37865	chr1_31922478_-	ncRNA_intronic
CAediting_37866	chr1_31922480_-	ncRNA_intronic
CAediting_37867	chr1_31922686_-	ncRNA_intronic
CAediting_37868	chr1_31922712_-	ncRNA_intronic
CAediting_37869	chr1_31922725_-	ncRNA_intronic
CAediting_37870	chr1_31922752_-	ncRNA_intronic
CAediting_37871	chr1_31922760_-	ncRNA_intronic
CAediting_37872	chr1_31922798_-	ncRNA_intronic
CAediting_37873	chr1_31922800_-	ncRNA_intronic
CAediting_37874	chr1_31922821_-	ncRNA_intronic
CAediting_37875	chr1_31922826_-	ncRNA_intronic
CAediting_37876	chr1_31922845_-	ncRNA_intronic
CAediting_37877	chr1_31922846_-	ncRNA_intronic
CAediting_37878	chr1_31922849_-	ncRNA_intronic
CAediting_37879	chr1_31922888_-	ncRNA_intronic
CAediting_37880	chr1_31922889_-	ncRNA_intronic
CAediting_37881	chr1_31922894_-	ncRNA_intronic
CAediting_37882	chr1_31922895_-	ncRNA_intronic
CAediting_37883	chr1_31922961_-	ncRNA_intronic
CAediting_37884	chr1_31922962_-	ncRNA_intronic
CAediting_37885	chr1_31922970_-	ncRNA_intronic
CAediting_37886	chr1_31923008_-	ncRNA_intronic
CAediting_37887	chr1_31923024_-	ncRNA_intronic
CAediting_37888	chr1_31923028_-	ncRNA_intronic
CAediting_37889	chr1_31923029_-	ncRNA_intronic
CAediting_37890	chr1_31923053_-	ncRNA_intronic
CAediting_37891	chr1_31923069_-	ncRNA_intronic
CAediting_37892	chr1_31923070_-	ncRNA_intronic
CAediting_37893	chr1_31923083_-	ncRNA_intronic
CAediting_37894	chr1_31923086_-	ncRNA_intronic
CAediting_37895	chr1_31923095_-	ncRNA_intronic
CAediting_37896	chr1_31923106_-	ncRNA_intronic
CAediting_37897	chr1_31923107_-	ncRNA_intronic
CAediting_37898	chr1_31923127_-	ncRNA_intronic
CAediting_37899	chr1_31923129_-	ncRNA_intronic
CAediting_37900	chr1_31923138_-	ncRNA_intronic
CAediting_37901	chr1_31923143_-	ncRNA_intronic
CAediting_37902	chr1_31923146_-	ncRNA_intronic
CAediting_37903	chr1_31923151_-	ncRNA_intronic
CAediting_37904	chr1_31923160_-	ncRNA_intronic
CAediting_37905	chr1_31923165_-	ncRNA_intronic
CAediting_37906	chr1_31923173_-	ncRNA_intronic
CAediting_37907	chr1_31923176_-	ncRNA_intronic
CAediting_37908	chr1_31923214_-	ncRNA_intronic
CAediting_37909	chr1_31923215_-	ncRNA_intronic
CAediting_37910	chr1_31923219_-	ncRNA_intronic
CAediting_37911	chr1_31923236_-	ncRNA_intronic
CAediting_37912	chr1_31923237_-	ncRNA_intronic
CAediting_37913	chr1_31923242_-	ncRNA_intronic
CAediting_37914	chr1_31923264_-	ncRNA_intronic
CAediting_37915	chr1_31923267_-	ncRNA_intronic
CAediting_37916	chr1_31923296_-	ncRNA_intronic
CAediting_37917	chr1_31923299_-	ncRNA_intronic
CAediting_37918	chr1_31923655_-	ncRNA_intronic
CAediting_37919	chr1_31923667_-	ncRNA_intronic
CAediting_37920	chr1_31923671_-	ncRNA_intronic
CAediting_37921	chr1_31923677_-	ncRNA_intronic
CAediting_37922	chr1_31923687_-	ncRNA_intronic
CAediting_37923	chr1_31923704_-	ncRNA_intronic
CAediting_37924	chr1_31923727_-	ncRNA_intronic
CAediting_37925	chr1_31923752_-	ncRNA_intronic
CAediting_37926	chr1_31923755_-	ncRNA_intronic
CAediting_37927	chr1_31923760_-	ncRNA_intronic
CAediting_37928	chr1_31923777_-	ncRNA_intronic
CAediting_37929	chr1_31923778_-	ncRNA_intronic
CAediting_37930	chr1_31923779_-	ncRNA_intronic
CAediting_37931	chr1_31923787_-	ncRNA_intronic
CAediting_37932	chr1_31923820_-	ncRNA_intronic
CAediting_37933	chr1_31925510_-	ncRNA_intronic
CAediting_37934	chr1_31925570_-	ncRNA_intronic
CAediting_37935	chr1_31925612_-	ncRNA_intronic
CAediting_37936	chr1_31925628_-	ncRNA_intronic
CAediting_37937	chr1_31925648_-	ncRNA_intronic
CAediting_37938	chr1_31925651_-	ncRNA_intronic
CAediting_37939	chr1_31925652_-	ncRNA_intronic
CAediting_37940	chr1_31925903_-	ncRNA_intronic
CAediting_37941	chr1_31934110_-	ncRNA_intronic
CAediting_37942	chr1_31934115_-	ncRNA_intronic
CAediting_37943	chr1_31934137_-	ncRNA_intronic
CAediting_37944	chr1_31934175_-	ncRNA_intronic
CAediting_37945	chr1_31934211_-	ncRNA_intronic
CAediting_37946	chr1_31934212_-	ncRNA_intronic
CAediting_37947	chr1_31934232_-	ncRNA_intronic
CAediting_37948	chr1_31934258_-	ncRNA_intronic
CAediting_37949	chr1_31935887_-	ncRNA_intronic
CAediting_37950	chr1_31935903_-	ncRNA_intronic
CAediting_37951	chr1_31935905_-	ncRNA_intronic
CAediting_37952	chr1_31935910_-	ncRNA_intronic
CAediting_37953	chr1_31935927_-	ncRNA_intronic
CAediting_37954	chr1_31935933_-	ncRNA_intronic
CAediting_37955	chr1_31935946_-	ncRNA_intronic
CAediting_37956	chr1_31935990_-	ncRNA_intronic
CAediting_37957	chr1_31935992_-	ncRNA_intronic
CAediting_37958	chr1_31936016_-	ncRNA_intronic
CAediting_37959	chr1_31936035_-	ncRNA_intronic
CAediting_37960	chr1_31936039_-	ncRNA_intronic
CAediting_37961	chr1_31936061_-	ncRNA_intronic
CAediting_37962	chr1_31936062_-	ncRNA_intronic
CAediting_37963	chr1_31936194_-	ncRNA_intronic
CAediting_37964	chr1_31936247_-	ncRNA_intronic
CAediting_37965	chr1_31936314_-	ncRNA_intronic
CAediting_37966	chr1_31936322_-	ncRNA_intronic
CAediting_37967	chr1_31936327_-	ncRNA_intronic
CAediting_37968	chr1_31936339_-	ncRNA_intronic
CAediting_37969	chr1_31936352_-	ncRNA_intronic
CAediting_37970	chr1_31936356_-	ncRNA_intronic
CAediting_37971	chr1_31936357_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_37776	chr1_31909528_-	SINE	Alu	AluSc
CAediting_37777	chr1_31909589_-	SINE	Alu	AluSc
CAediting_37778	chr1_31909626_-	SINE	Alu	AluSc
CAediting_37779	chr1_31910398_-	SINE	Alu	AluJb
CAediting_37780	chr1_31910446_-	SINE	Alu	AluJb
CAediting_37781	chr1_31914318_-	SINE	Alu	AluJb
CAediting_37782	chr1_31915390_-	SINE	Alu	AluJb
CAediting_37783	chr1_31915417_-	SINE	Alu	AluJb
CAediting_37784	chr1_31915427_-	SINE	Alu	AluJb
CAediting_37785	chr1_31915465_-	SINE	Alu	AluJb
CAediting_37786	chr1_31915469_-	SINE	Alu	AluJb
CAediting_37787	chr1_31915501_-	SINE	Alu	AluJb
CAediting_37788	chr1_31915503_-	SINE	Alu	AluJb
CAediting_37789	chr1_31915632_-	SINE	Alu	AluJb
CAediting_37790	chr1_31915637_-	SINE	Alu	AluJb
CAediting_37791	chr1_31915642_-	SINE	Alu	AluJb
CAediting_37792	chr1_31915655_-	SINE	Alu	AluJb
CAediting_37793	chr1_31915696_-	SINE	Alu	AluJb
CAediting_37794	chr1_31915753_-	SINE	Alu	AluJb
CAediting_37795	chr1_31915759_-	SINE	Alu	AluJb
CAediting_37796	chr1_31915806_-	SINE	Alu	AluJb
CAediting_37797	chr1_31915808_-	SINE	Alu	AluJb
CAediting_37798	chr1_31915822_-	SINE	Alu	AluJb
CAediting_37799	chr1_31919854_-	SINE	Alu	AluSp
CAediting_37800	chr1_31919861_-	SINE	Alu	AluSp
CAediting_37801	chr1_31919870_-	SINE	Alu	AluSp
CAediting_37802	chr1_31919876_-	SINE	Alu	AluSp
CAediting_37803	chr1_31919892_-	SINE	Alu	AluSp
CAediting_37804	chr1_31919915_-	SINE	Alu	AluSp
CAediting_37805	chr1_31919923_-	SINE	Alu	AluSp
CAediting_37806	chr1_31919944_-	SINE	Alu	AluSp
CAediting_37807	chr1_31919961_-	SINE	Alu	AluSp
CAediting_37808	chr1_31919964_-	SINE	Alu	AluSp
CAediting_37809	chr1_31919978_-	SINE	Alu	AluSp
CAediting_37810	chr1_31920026_-	SINE	Alu	AluSp
CAediting_37811	chr1_31920043_-	SINE	Alu	AluSp
CAediting_37812	chr1_31920066_-	SINE	Alu	AluSp
CAediting_37813	chr1_31920171_-	SINE	Alu	AluSp
CAediting_37814	chr1_31920181_-	SINE	Alu	AluSp
CAediting_37815	chr1_31920281_-	SINE	Alu	AluSp
CAediting_37816	chr1_31920287_-	SINE	Alu	AluSp
CAediting_37817	chr1_31920343_-	SINE	Alu	AluSp
CAediting_37818	chr1_31920360_-	SINE	Alu	AluSp
CAediting_37819	chr1_31920361_-	SINE	Alu	AluSp
CAediting_37820	chr1_31920397_-	SINE	Alu	AluSp
CAediting_37821	chr1_31920438_-	SINE	Alu	AluSp
CAediting_37822	chr1_31920567_-	SINE	Alu	AluSx1
CAediting_37823	chr1_31920605_-	SINE	Alu	AluSx1
CAediting_37824	chr1_31920675_-	SINE	Alu	AluSx1
CAediting_37825	chr1_31920711_-	SINE	Alu	AluSx1
CAediting_37826	chr1_31920713_-	SINE	Alu	AluSx1
CAediting_37827	chr1_31920715_-	SINE	Alu	AluSx1
CAediting_37828	chr1_31920716_-	SINE	Alu	AluSx1
CAediting_37829	chr1_31920717_-	SINE	Alu	AluSx1
CAediting_37830	chr1_31920720_-	SINE	Alu	AluSx1
CAediting_37831	chr1_31920732_-	SINE	Alu	AluSx1
CAediting_37832	chr1_31920741_-	SINE	Alu	AluSx1
CAediting_37833	chr1_31920765_-	SINE	Alu	AluSx1
CAediting_37834	chr1_31920770_-	SINE	Alu	AluSx1
CAediting_37835	chr1_31920775_-	SINE	Alu	AluSx1
CAediting_37836	chr1_31920784_-	SINE	Alu	AluSx1
CAediting_37837	chr1_31920788_-	SINE	Alu	AluSx1
CAediting_37838	chr1_31920810_-	SINE	Alu	AluSx1
CAediting_37839	chr1_31920824_-	SINE	Alu	AluSx1
CAediting_37840	chr1_31920833_-	SINE	Alu	AluSx1
CAediting_37841	chr1_31922228_-	SINE	Alu	AluSp
CAediting_37842	chr1_31922232_-	SINE	Alu	AluSp
CAediting_37843	chr1_31922240_-	SINE	Alu	AluSp
CAediting_37844	chr1_31922241_-	SINE	Alu	AluSp
CAediting_37845	chr1_31922262_-	SINE	Alu	AluSp
CAediting_37846	chr1_31922279_-	SINE	Alu	AluSp
CAediting_37847	chr1_31922318_-	SINE	Alu	AluSp
CAediting_37848	chr1_31922335_-	SINE	Alu	AluSp
CAediting_37849	chr1_31922338_-	SINE	Alu	AluSp
CAediting_37850	chr1_31922345_-	SINE	Alu	AluSp
CAediting_37851	chr1_31922348_-	SINE	Alu	AluSp
CAediting_37852	chr1_31922359_-	SINE	Alu	AluSp
CAediting_37853	chr1_31922363_-	SINE	Alu	AluSp
CAediting_37854	chr1_31922371_-	SINE	Alu	AluSp
CAediting_37855	chr1_31922374_-	SINE	Alu	AluSp
CAediting_37856	chr1_31922383_-	SINE	Alu	AluSp
CAediting_37857	chr1_31922397_-	SINE	Alu	AluSp
CAediting_37858	chr1_31922400_-	SINE	Alu	AluSp
CAediting_37859	chr1_31922401_-	SINE	Alu	AluSp
CAediting_37860	chr1_31922407_-	SINE	Alu	AluSp
CAediting_37861	chr1_31922420_-	SINE	Alu	AluSp
CAediting_37862	chr1_31922437_-	SINE	Alu	AluSp
CAediting_37863	chr1_31922439_-	SINE	Alu	AluSp
CAediting_37864	chr1_31922457_-	SINE	Alu	AluSp
CAediting_37865	chr1_31922478_-	SINE	Alu	AluSp
CAediting_37866	chr1_31922480_-	SINE	Alu	AluSp
CAediting_37867	chr1_31922686_-	SINE	Alu	AluJb
CAediting_37868	chr1_31922712_-	SINE	Alu	AluJb
CAediting_37869	chr1_31922725_-	SINE	Alu	AluJb
CAediting_37870	chr1_31922752_-	SINE	Alu	AluJb
CAediting_37871	chr1_31922760_-	SINE	Alu	AluJb
CAediting_37872	chr1_31922798_-	SINE	Alu	AluJb
CAediting_37873	chr1_31922800_-	SINE	Alu	AluJb
CAediting_37874	chr1_31922821_-	SINE	Alu	AluJb
CAediting_37875	chr1_31922826_-	SINE	Alu	AluJb
CAediting_37876	chr1_31922845_-	SINE	Alu	AluJb
CAediting_37877	chr1_31922846_-	SINE	Alu	AluJb
CAediting_37878	chr1_31922849_-	SINE	Alu	AluJb
CAediting_37879	chr1_31922888_-	SINE	Alu	AluJb
CAediting_37880	chr1_31922889_-	SINE	Alu	AluJb
CAediting_37881	chr1_31922894_-	SINE	Alu	AluJb
CAediting_37882	chr1_31922895_-	SINE	Alu	AluJb
CAediting_37883	chr1_31922961_-	SINE	Alu	AluSg
CAediting_37884	chr1_31922962_-	SINE	Alu	AluSg
CAediting_37885	chr1_31922970_-	SINE	Alu	AluSg
CAediting_37886	chr1_31923008_-	SINE	Alu	AluSg
CAediting_37887	chr1_31923024_-	SINE	Alu	AluSg
CAediting_37888	chr1_31923028_-	SINE	Alu	AluSg
CAediting_37889	chr1_31923029_-	SINE	Alu	AluSg
CAediting_37890	chr1_31923053_-	SINE	Alu	AluSg
CAediting_37891	chr1_31923069_-	SINE	Alu	AluSg
CAediting_37892	chr1_31923070_-	SINE	Alu	AluSg
CAediting_37893	chr1_31923083_-	SINE	Alu	AluSg
CAediting_37894	chr1_31923086_-	SINE	Alu	AluSg
CAediting_37895	chr1_31923095_-	SINE	Alu	AluSg
CAediting_37896	chr1_31923106_-	SINE	Alu	AluSg
CAediting_37897	chr1_31923107_-	SINE	Alu	AluSg
CAediting_37898	chr1_31923127_-	SINE	Alu	AluSg
CAediting_37899	chr1_31923129_-	SINE	Alu	AluSg
CAediting_37900	chr1_31923138_-	SINE	Alu	AluSg
CAediting_37901	chr1_31923143_-	SINE	Alu	AluSg
CAediting_37902	chr1_31923146_-	SINE	Alu	AluSg
CAediting_37903	chr1_31923151_-	SINE	Alu	AluSg
CAediting_37904	chr1_31923160_-	SINE	Alu	AluSg
CAediting_37905	chr1_31923165_-	SINE	Alu	AluSg
CAediting_37906	chr1_31923173_-	SINE	Alu	AluSg
CAediting_37907	chr1_31923176_-	SINE	Alu	AluSg
CAediting_37908	chr1_31923214_-	SINE	Alu	AluJo
CAediting_37909	chr1_31923215_-	SINE	Alu	AluJo
CAediting_37910	chr1_31923219_-	SINE	Alu	AluJo
CAediting_37911	chr1_31923236_-	SINE	Alu	AluJo
CAediting_37912	chr1_31923237_-	SINE	Alu	AluJo
CAediting_37913	chr1_31923242_-	SINE	Alu	AluJo
CAediting_37914	chr1_31923264_-	SINE	Alu	AluJo
CAediting_37915	chr1_31923267_-	SINE	Alu	AluJo
CAediting_37916	chr1_31923296_-	SINE	Alu	AluJo
CAediting_37917	chr1_31923299_-	SINE	Alu	AluJo
CAediting_37918	chr1_31923655_-	SINE	Alu	AluJo
CAediting_37919	chr1_31923667_-	SINE	Alu	AluJo
CAediting_37920	chr1_31923671_-	SINE	Alu	AluJo
CAediting_37921	chr1_31923677_-	SINE	Alu	AluJo
CAediting_37922	chr1_31923687_-	SINE	Alu	AluJo
CAediting_37923	chr1_31923704_-	SINE	Alu	AluJo
CAediting_37924	chr1_31923727_-	SINE	Alu	AluJo
CAediting_37925	chr1_31923752_-	SINE	Alu	AluJo
CAediting_37926	chr1_31923755_-	SINE	Alu	AluJo
CAediting_37927	chr1_31923760_-	SINE	Alu	AluJo
CAediting_37928	chr1_31923777_-	SINE	Alu	AluJo
CAediting_37929	chr1_31923778_-	SINE	Alu	AluJo
CAediting_37930	chr1_31923779_-	SINE	Alu	AluJo
CAediting_37931	chr1_31923787_-	SINE	Alu	AluJo
CAediting_37932	chr1_31923820_-	SINE	Alu	AluJo
CAediting_37933	chr1_31925510_-	SINE	Alu	AluY
CAediting_37934	chr1_31925570_-	SINE	Alu	AluY
CAediting_37935	chr1_31925612_-	SINE	Alu	AluY
CAediting_37936	chr1_31925628_-	SINE	Alu	AluY
CAediting_37937	chr1_31925648_-	SINE	Alu	AluY
CAediting_37938	chr1_31925651_-	SINE	Alu	AluY
CAediting_37939	chr1_31925652_-	SINE	Alu	AluY
CAediting_37940	chr1_31925903_-	SINE	Alu	AluSc5
CAediting_37941	chr1_31934110_-	SINE	Alu	AluSq
CAediting_37942	chr1_31934115_-	SINE	Alu	AluSq
CAediting_37943	chr1_31934137_-	SINE	Alu	AluSq
CAediting_37944	chr1_31934175_-	SINE	Alu	AluSq
CAediting_37945	chr1_31934211_-	SINE	Alu	AluSq
CAediting_37946	chr1_31934212_-	SINE	Alu	AluSq
CAediting_37947	chr1_31934232_-	SINE	Alu	AluSq
CAediting_37948	chr1_31934258_-	SINE	Alu	AluSq
CAediting_37949	chr1_31935887_-	SINE	Alu	AluJb
CAediting_37950	chr1_31935903_-	SINE	Alu	AluJb
CAediting_37951	chr1_31935905_-	SINE	Alu	AluJb
CAediting_37952	chr1_31935910_-	SINE	Alu	AluJb
CAediting_37953	chr1_31935927_-	SINE	Alu	AluJb
CAediting_37954	chr1_31935933_-	SINE	Alu	AluJb
CAediting_37955	chr1_31935946_-	SINE	Alu	AluJb
CAediting_37956	chr1_31935990_-	SINE	Alu	AluJb
CAediting_37957	chr1_31935992_-	SINE	Alu	AluJb
CAediting_37958	chr1_31936016_-	SINE	Alu	AluJb
CAediting_37959	chr1_31936035_-	SINE	Alu	AluJb
CAediting_37960	chr1_31936039_-	SINE	Alu	AluJb
CAediting_37961	chr1_31936061_-	SINE	Alu	AluJb
CAediting_37962	chr1_31936062_-	SINE	Alu	AluJb
CAediting_37963	chr1_31936194_-	SINE	Alu	AluSz
CAediting_37964	chr1_31936247_-	SINE	Alu	AluSz
CAediting_37965	chr1_31936314_-	SINE	Alu	AluSz
CAediting_37966	chr1_31936322_-	SINE	Alu	AluSz
CAediting_37967	chr1_31936327_-	SINE	Alu	AluSz
CAediting_37968	chr1_31936339_-	SINE	Alu	AluSz
CAediting_37969	chr1_31936352_-	SINE	Alu	AluSz
CAediting_37970	chr1_31936356_-	SINE	Alu	AluSz
CAediting_37971	chr1_31936357_-	SINE	Alu	AluSz

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RNA A-to-I editing events in the alternative splicing sites for PTP4A2

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000184007.16.PTP4A2.

Correlation between RNA A-to-I editing and PSI for ENSG00000184007.16.PTP4A2.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PTP4A2

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PTP4A2

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for PTP4A2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000184007.16	ENST00000602725	hsa-miR-624-3p	31907817	31907824	8mer-1a	31907817	31907837	155	-12.7
CAediting_688080	chr9_63819626_+	ENSG00000184007.16	ENST00000602725	hsa-miR-4477b	31908730	31908736	7mer-m8	31908729	31908749	145	-12.51
CAediting_688081	chr9_63819627_+	ENSG00000184007.16	ENST00000602725	hsa-miR-4477b	31907922	31907928	7mer-m8	31907921	31907942	140	-9.22
CAediting_688080	chr9_63819626_+	ENSG00000184007.16	ENST00000457805	hsa-miR-4477b	31908730	31908736	7mer-m8	31908729	31908749	145	-12.51
CAediting_688080	chr9_63819626_+	ENSG00000184007.16	ENST00000602683	hsa-miR-4477b	31908730	31908736	7mer-m8	31908729	31908749	145	-12.51
CAediting_688080	chr9_63819626_+	ENSG00000184007.16	ENST00000470404	hsa-miR-4477b	31908730	31908736	7mer-m8	31908729	31908749	145	-12.51
CAediting_86358	chr1_109598906_+	ENSG00000184007.16	ENST00000532001	hsa-miR-197-5p	31911797	31911803	7mer-m8	31911796	31911818	145	-17.58
CAediting_86358	chr1_109598906_+	ENSG00000184007.16	ENST00000528253	hsa-miR-197-5p	31911797	31911803	7mer-m8	31911796	31911818	145	-17.58

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000184007.16	ENST00000602725	hsa-miR-4477b	31906572	31906579	8mer-1a	31906572	31906593	142	-5.96
CAediting_688081	chr9_63819627_+	ENSG00000184007.16	ENST00000602725	hsa-miR-4477b	31906572	31906579	8mer-1a	31906572	31906593	142	-5.96
CAediting_1229413	chr17_67471544_+	ENSG00000184007.16	ENST00000602725	hsa-miR-548aa	31908099	31908105	7mer-m8	31908098	31908122	145	-11.14
CAediting_980496	chr14_31014685_-	ENSG00000184007.16	ENST00000602725	hsa-miR-624-3p	31907600	31907605	6mer	31907599	31907621	140	-13.29
CAediting_468389	chr6_31355314_-	ENSG00000184007.16	ENST00000602725	hsa-miR-6891-5p	31906626	31906632	7mer-m8	31906625	31906644	149	-19.31

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PTP4A2

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000489313.1	retained_intron
ENST00000484483.1	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_37779	ENST00000489313.1	chr1_31910398_-	-411.60	-407.50	-412.30
CAediting_37780	ENST00000489313.1	chr1_31910446_-	-408.20	-407.50	-412.30
CAediting_37789	ENST00000484483.1	chr1_31915632_-	-183.90	-184.70	-188.90
CAediting_37790	ENST00000484483.1	chr1_31915637_-	-183.80	-184.70	-188.90
CAediting_37791	ENST00000484483.1	chr1_31915642_-	-184.30	-184.70	-188.90
CAediting_37792	ENST00000484483.1	chr1_31915655_-	-184.60	-184.70	-188.90
CAediting_37793	ENST00000484483.1	chr1_31915696_-	-184.30	-184.70	-188.90
CAediting_37794	ENST00000484483.1	chr1_31915753_-	-186.30	-184.70	-188.90
CAediting_37795	ENST00000484483.1	chr1_31915759_-	-184.70	-184.70	-188.90
CAediting_37796	ENST00000484483.1	chr1_31915806_-	-185.00	-184.70	-188.90
CAediting_37797	ENST00000484483.1	chr1_31915808_-	-187.30	-184.70	-188.90
CAediting_37798	ENST00000484483.1	chr1_31915822_-	-184.00	-184.70	-188.90

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Relation with ADAR for PTP4A2

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for PTP4A2

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for PTP4A2

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for PTP4A2

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for PTP4A2

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
PTP4A2	C1135196	Heart Failure, Diastolic	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene