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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: SLC19A3 (CAeditome ID:80704)

Gene summary for SLC19A3

check button Gene summary
Gene informationGene symbol

SLC19A3

Gene ID

80704

Gene namesolute carrier family 19 member 3
SynonymsBBGD|THMD2|THTR2|thTr-2
Cytomap

2q36.3

Type of geneprotein-coding
Descriptionthiamine transporter 2solute carrier family 19 (thiamine transporter), member 3
Modification date20210518
UniProtAcc

Q9BZV2

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for SLC19A3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000135917.12
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_246629(227685634, -), CAediting_246630(227685662, -), CAediting_246631(227685692, -), CAediting_246632(227685694, -), CAediting_246633(227685938, -), CAediting_246634(227685940, -), CAediting_246635(227685945, -), CAediting_246636(227685952, -), CAediting_246637(227685953, -), CAediting_246638(227685992, -), CAediting_246639(227685993, -), CAediting_246640(227685994, -), CAediting_246641(227686005, -), CAediting_246642(227686015, -), CAediting_246643(227686017, -), CAediting_246644(227686029, -), CAediting_246645(227686034, -), CAediting_246646(227686040, -), CAediting_246647(227686048, -), CAediting_246648(227686065, -), CAediting_246649(227686085, -), CAediting_246650(227686088, -), CAediting_246651(227686089, -), CAediting_246652(227686097, -), CAediting_246653(227686102, -), CAediting_246654(227686115, -), CAediting_246655(227686134, -), CAediting_246656(227686135, -), CAediting_246657(227686140, -), CAediting_246658(227686158, -), CAediting_246659(227686163, -), CAediting_246660(227686164, -), CAediting_246661(227686357, -), CAediting_246662(227686391, -), CAediting_246663(227686395, -), CAediting_246664(227686404, -), CAediting_246665(227686408, -), CAediting_246666(227686411, -), CAediting_246667(227686416, -), CAediting_246668(227686435, -), CAediting_246669(227686440, -), CAediting_246670(227686447, -), CAediting_246671(227686457, -), CAediting_246672(227686475, -), CAediting_246673(227686483, -), CAediting_246674(227686486, -), CAediting_246675(227686487, -), CAediting_246676(227686488, -), CAediting_246677(227686490, -), CAediting_246678(227686494, -), CAediting_246679(227686496, -), CAediting_246680(227686497, -), CAediting_246681(227686498, -), CAediting_246682(227686499, -), CAediting_246683(227686522, -), CAediting_246684(227686532, -), CAediting_246685(227686535, -), CAediting_246686(227686537, -), CAediting_246687(227686538, -), CAediting_246688(227686544, -), CAediting_246689(227686546, -), CAediting_246690(227686551, -), CAediting_246691(227686570, -), CAediting_246692(227686575, -), CAediting_246693(227686586, -), CAediting_246694(227686591, -), CAediting_246695(227686592, -), CAediting_246696(227686600, -), CAediting_246697(227686608, -), CAediting_246698(227686614, -), CAediting_246699(227694180, -), CAediting_246700(227694256, -), CAediting_246701(227694274, -), CAediting_246702(227694977, -), CAediting_246703(227695385, -), CAediting_246704(227695400, -), CAediting_246705(227695444, -), CAediting_246706(227695477, -), CAediting_246707(227695508, -), CAediting_246708(227696892, -), CAediting_246709(227699908, -), CAediting_246710(227699930, -), CAediting_246711(227699946, -), CAediting_246712(227699974, -), CAediting_246713(227699991, -), CAediting_246714(227700006, -), CAediting_246715(227700015, -), CAediting_246716(227700016, -), CAediting_246717(227700042, -), CAediting_246718(227700089, -), CAediting_246719(227700416, -), CAediting_246720(227701527, -), CAediting_246721(227702429, -), CAediting_246722(227702451, -), CAediting_246723(227702461, -), CAediting_246724(227702470, -), CAediting_246725(227702477, -), CAediting_246726(227702509, -), CAediting_246727(227702531, -), CAediting_246728(227702532, -), CAediting_246729(227702542, -), CAediting_246730(227702558, -), CAediting_246731(227702575, -), CAediting_246732(227702596, -), CAediting_246733(227702597, -), CAediting_246734(227702609, -), CAediting_246735(227702611, -), CAediting_246736(227702612, -), CAediting_246737(227704678, -), CAediting_246738(227704679, -), CAediting_246739(227704688, -), CAediting_246740(227704705, -), CAediting_246741(227704706, -), CAediting_246742(227704738, -), CAediting_246743(227704755, -), CAediting_246744(227704760, -), CAediting_246745(227704762, -), CAediting_246746(227704779, -), CAediting_246747(227704780, -), CAediting_246748(227704910, -), CAediting_246749(227704947, -), CAediting_246750(227704948, -), CAediting_246751(227704953, -), CAediting_246752(227704977, -), CAediting_246753(227704978, -), CAediting_246754(227704996, -), CAediting_246755(227705079, -), CAediting_246756(227705105, -), CAediting_246757(227705383, -), CAediting_246758(227705384, -), CAediting_246759(227705398, -), CAediting_246760(227705429, -), CAediting_246761(227705932, -), CAediting_246762(227705940, -), CAediting_246763(227705948, -), CAediting_246764(227705953, -), CAediting_246765(227705965, -), CAediting_246766(227705966, -), CAediting_246767(227705986, -), CAediting_246768(227706007, -), CAediting_246769(227706010, -), CAediting_246770(227706526, -), CAediting_246771(227706574, -), CAediting_246772(227706591, -), CAediting_246773(227706622, -), CAediting_246774(227706623, -), CAediting_246775(227706659, -), CAediting_246776(227706662, -), CAediting_246777(227706671, -), CAediting_246778(227706684, -), CAediting_246779(227706688, -), CAediting_246780(227707322, -), CAediting_246781(227707328, -), CAediting_246782(227707367, -), CAediting_246783(227707388, -), CAediting_246784(227707461, -), CAediting_246785(227707471, -), CAediting_246786(227707475, -), CAediting_246787(227707483, -), CAediting_246788(227707488, -), CAediting_246789(227707531, -), CAediting_246790(227707794, -), CAediting_246791(227707813, -), CAediting_246792(227707839, -), CAediting_246793(227707859, -), CAediting_246794(227707865, -), CAediting_246795(227707866, -), CAediting_246796(227707876, -), CAediting_246797(227707966, -), CAediting_246798(227707974, -), CAediting_246799(227707975, -), CAediting_246800(227708499, -), CAediting_246801(227708516, -), CAediting_246802(227709264, -), CAediting_246803(227709337, -), CAediting_246804(227709350, -), CAediting_246805(227709361, -), CAediting_246806(227709363, -), CAediting_246807(227709373, -), CAediting_246808(227709376, -), CAediting_246809(227709377, -), CAediting_246810(227709385, -), CAediting_246811(227709402, -), CAediting_246812(227709416, -), CAediting_246813(227709478, -), CAediting_246814(227710479, -), CAediting_246815(227710485, -), CAediting_246816(227710491, -), CAediting_246817(227710492, -), CAediting_246818(227710533, -), CAediting_246819(227710541, -), CAediting_246820(227710548, -), CAediting_246821(227712169, -), CAediting_246822(227713160, -), CAediting_246823(227713210, -), CAediting_246824(227713281, -), CAediting_246825(227713291, -), CAediting_246826(227713319, -), CAediting_246827(227713368, -), CAediting_246828(227714872, -), CAediting_246829(227714912, -), CAediting_246830(227714916, -), CAediting_246831(227714917, -), CAediting_246832(227714948, -), CAediting_246833(227714980, -), CAediting_246834(227714984, -), CAediting_246835(227714987, -), CAediting_246836(227714988, -), CAediting_246837(227714989, -), CAediting_246838(227714993, -), CAediting_246839(227715002, -), CAediting_246840(227715016, -), CAediting_246841(227715020, -), CAediting_246842(227715037, -), CAediting_246843(227715039, -), CAediting_246844(227715047, -), CAediting_246845(227715092, -), CAediting_246846(227715842, -), CAediting_246847(227715913, -), CAediting_246848(227717033, -), CAediting_246849(227717063, -), CAediting_246850(227717070, -), CAediting_246851(227717071, -), CAediting_246852(227717079, -), CAediting_246853(227717100, -), CAediting_246854(227717111, -), CAediting_246855(227717118, -), CAediting_246856(227717135, -), CAediting_246857(227717140, -), CAediting_246858(227717141, -), CAediting_246859(227717167, -), CAediting_246860(227717170, -), CAediting_246861(227717171, -), CAediting_246862(227717172, -), CAediting_246863(227717173, -), CAediting_246864(227717178, -), CAediting_246865(227717179, -), CAediting_246866(227717180, -), CAediting_246867(227717185, -), CAediting_246868(227717215, -), CAediting_246869(227717225, -), CAediting_246870(227717234, -), CAediting_246871(227717274, -), CAediting_246872(227717275, -), CAediting_246873(227717283, -), CAediting_246874(227717291, -), CAediting_246875(227717297, -),

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RNA editing positional annotations for SLC19A3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_246660chr2_227686164_-nonsynonymous SNVENST00000409287.4c.A265Gp.N89DD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_246629chr2_227685634_-UTR3
CAediting_246630chr2_227685662_-UTR3
CAediting_246631chr2_227685692_-UTR3
CAediting_246632chr2_227685694_-UTR3
CAediting_246633chr2_227685938_-UTR3
CAediting_246634chr2_227685940_-UTR3
CAediting_246635chr2_227685945_-UTR3
CAediting_246636chr2_227685952_-UTR3
CAediting_246637chr2_227685953_-UTR3
CAediting_246638chr2_227685992_-UTR3
CAediting_246639chr2_227685993_-UTR3
CAediting_246640chr2_227685994_-UTR3
CAediting_246641chr2_227686005_-UTR3
CAediting_246642chr2_227686015_-UTR3
CAediting_246643chr2_227686017_-UTR3
CAediting_246644chr2_227686029_-UTR3
CAediting_246645chr2_227686034_-UTR3
CAediting_246646chr2_227686040_-UTR3
CAediting_246647chr2_227686048_-UTR3
CAediting_246648chr2_227686065_-UTR3
CAediting_246649chr2_227686085_-UTR3
CAediting_246650chr2_227686088_-UTR3
CAediting_246651chr2_227686089_-UTR3
CAediting_246652chr2_227686097_-UTR3
CAediting_246653chr2_227686102_-UTR3
CAediting_246654chr2_227686115_-UTR3
CAediting_246655chr2_227686134_-UTR3
CAediting_246656chr2_227686135_-UTR3
CAediting_246657chr2_227686140_-UTR3
CAediting_246658chr2_227686158_-exonic
CAediting_246659chr2_227686163_-exonic
CAediting_246660chr2_227686164_-exonic
CAediting_246661chr2_227686357_-UTR3
CAediting_246662chr2_227686391_-UTR3
CAediting_246663chr2_227686395_-UTR3
CAediting_246664chr2_227686404_-UTR3
CAediting_246665chr2_227686408_-UTR3
CAediting_246666chr2_227686411_-UTR3
CAediting_246667chr2_227686416_-UTR3
CAediting_246668chr2_227686435_-UTR3
CAediting_246669chr2_227686440_-UTR3
CAediting_246670chr2_227686447_-UTR3
CAediting_246671chr2_227686457_-UTR3
CAediting_246672chr2_227686475_-UTR3
CAediting_246673chr2_227686483_-UTR3
CAediting_246674chr2_227686486_-UTR3
CAediting_246675chr2_227686487_-UTR3
CAediting_246676chr2_227686488_-UTR3
CAediting_246677chr2_227686490_-UTR3
CAediting_246678chr2_227686494_-UTR3
CAediting_246679chr2_227686496_-UTR3
CAediting_246680chr2_227686497_-UTR3
CAediting_246681chr2_227686498_-UTR3
CAediting_246682chr2_227686499_-UTR3
CAediting_246683chr2_227686522_-UTR3
CAediting_246684chr2_227686532_-UTR3
CAediting_246685chr2_227686535_-UTR3
CAediting_246686chr2_227686537_-UTR3
CAediting_246687chr2_227686538_-UTR3
CAediting_246688chr2_227686544_-UTR3
CAediting_246689chr2_227686546_-UTR3
CAediting_246690chr2_227686551_-UTR3
CAediting_246691chr2_227686570_-UTR3
CAediting_246692chr2_227686575_-UTR3
CAediting_246693chr2_227686586_-UTR3
CAediting_246694chr2_227686591_-UTR3
CAediting_246695chr2_227686592_-UTR3
CAediting_246696chr2_227686600_-UTR3
CAediting_246697chr2_227686608_-UTR3
CAediting_246698chr2_227686614_-UTR3
CAediting_246699chr2_227694180_-intronic
CAediting_246700chr2_227694256_-intronic
CAediting_246701chr2_227694274_-intronic
CAediting_246702chr2_227694977_-intronic
CAediting_246703chr2_227695385_-intronic
CAediting_246704chr2_227695400_-intronic
CAediting_246705chr2_227695444_-intronic
CAediting_246706chr2_227695477_-intronic
CAediting_246707chr2_227695508_-intronic
CAediting_246708chr2_227696892_-intronic
CAediting_246709chr2_227699908_-intronic
CAediting_246710chr2_227699930_-intronic
CAediting_246711chr2_227699946_-intronic
CAediting_246712chr2_227699974_-intronic
CAediting_246713chr2_227699991_-intronic
CAediting_246714chr2_227700006_-intronic
CAediting_246715chr2_227700015_-intronic
CAediting_246716chr2_227700016_-intronic
CAediting_246717chr2_227700042_-intronic
CAediting_246718chr2_227700089_-intronic
CAediting_246719chr2_227700416_-intronic
CAediting_246720chr2_227701527_-intronic
CAediting_246721chr2_227702429_-ncRNA_intronic
CAediting_246722chr2_227702451_-ncRNA_intronic
CAediting_246723chr2_227702461_-ncRNA_intronic
CAediting_246724chr2_227702470_-ncRNA_intronic
CAediting_246725chr2_227702477_-ncRNA_intronic
CAediting_246726chr2_227702509_-ncRNA_intronic
CAediting_246727chr2_227702531_-ncRNA_intronic
CAediting_246728chr2_227702532_-ncRNA_intronic
CAediting_246729chr2_227702542_-ncRNA_intronic
CAediting_246730chr2_227702558_-ncRNA_intronic
CAediting_246731chr2_227702575_-ncRNA_intronic
CAediting_246732chr2_227702596_-ncRNA_intronic
CAediting_246733chr2_227702597_-ncRNA_intronic
CAediting_246734chr2_227702609_-ncRNA_intronic
CAediting_246735chr2_227702611_-ncRNA_intronic
CAediting_246736chr2_227702612_-ncRNA_intronic
CAediting_246737chr2_227704678_-ncRNA_intronic
CAediting_246738chr2_227704679_-ncRNA_intronic
CAediting_246739chr2_227704688_-ncRNA_intronic
CAediting_246740chr2_227704705_-ncRNA_intronic
CAediting_246741chr2_227704706_-ncRNA_intronic
CAediting_246742chr2_227704738_-ncRNA_intronic
CAediting_246743chr2_227704755_-ncRNA_intronic
CAediting_246744chr2_227704760_-ncRNA_intronic
CAediting_246745chr2_227704762_-ncRNA_intronic
CAediting_246746chr2_227704779_-ncRNA_intronic
CAediting_246747chr2_227704780_-ncRNA_intronic
CAediting_246748chr2_227704910_-ncRNA_intronic
CAediting_246749chr2_227704947_-ncRNA_intronic
CAediting_246750chr2_227704948_-ncRNA_intronic
CAediting_246751chr2_227704953_-ncRNA_intronic
CAediting_246752chr2_227704977_-ncRNA_intronic
CAediting_246753chr2_227704978_-ncRNA_intronic
CAediting_246754chr2_227704996_-ncRNA_intronic
CAediting_246755chr2_227705079_-ncRNA_intronic
CAediting_246756chr2_227705105_-ncRNA_intronic
CAediting_246757chr2_227705383_-ncRNA_intronic
CAediting_246758chr2_227705384_-ncRNA_intronic
CAediting_246759chr2_227705398_-ncRNA_intronic
CAediting_246760chr2_227705429_-ncRNA_intronic
CAediting_246761chr2_227705932_-ncRNA_intronic
CAediting_246762chr2_227705940_-ncRNA_intronic
CAediting_246763chr2_227705948_-ncRNA_intronic
CAediting_246764chr2_227705953_-ncRNA_intronic
CAediting_246765chr2_227705965_-ncRNA_intronic
CAediting_246766chr2_227705966_-ncRNA_intronic
CAediting_246767chr2_227705986_-ncRNA_intronic
CAediting_246768chr2_227706007_-ncRNA_intronic
CAediting_246769chr2_227706010_-ncRNA_intronic
CAediting_246770chr2_227706526_-ncRNA_intronic
CAediting_246771chr2_227706574_-ncRNA_intronic
CAediting_246772chr2_227706591_-ncRNA_intronic
CAediting_246773chr2_227706622_-ncRNA_intronic
CAediting_246774chr2_227706623_-ncRNA_intronic
CAediting_246775chr2_227706659_-ncRNA_intronic
CAediting_246776chr2_227706662_-ncRNA_intronic
CAediting_246777chr2_227706671_-ncRNA_intronic
CAediting_246778chr2_227706684_-ncRNA_intronic
CAediting_246779chr2_227706688_-ncRNA_intronic
CAediting_246780chr2_227707322_-ncRNA_intronic
CAediting_246781chr2_227707328_-ncRNA_intronic
CAediting_246782chr2_227707367_-ncRNA_intronic
CAediting_246783chr2_227707388_-ncRNA_intronic
CAediting_246784chr2_227707461_-ncRNA_intronic
CAediting_246785chr2_227707471_-ncRNA_intronic
CAediting_246786chr2_227707475_-ncRNA_intronic
CAediting_246787chr2_227707483_-ncRNA_intronic
CAediting_246788chr2_227707488_-ncRNA_intronic
CAediting_246789chr2_227707531_-ncRNA_intronic
CAediting_246790chr2_227707794_-ncRNA_intronic
CAediting_246791chr2_227707813_-ncRNA_intronic
CAediting_246792chr2_227707839_-ncRNA_intronic
CAediting_246793chr2_227707859_-ncRNA_intronic
CAediting_246794chr2_227707865_-ncRNA_intronic
CAediting_246795chr2_227707866_-ncRNA_intronic
CAediting_246796chr2_227707876_-ncRNA_intronic
CAediting_246797chr2_227707966_-ncRNA_intronic
CAediting_246798chr2_227707974_-ncRNA_intronic
CAediting_246799chr2_227707975_-ncRNA_intronic
CAediting_246800chr2_227708499_-ncRNA_intronic
CAediting_246801chr2_227708516_-ncRNA_intronic
CAediting_246802chr2_227709264_-ncRNA_intronic
CAediting_246803chr2_227709337_-ncRNA_intronic
CAediting_246804chr2_227709350_-ncRNA_intronic
CAediting_246805chr2_227709361_-ncRNA_intronic
CAediting_246806chr2_227709363_-ncRNA_intronic
CAediting_246807chr2_227709373_-ncRNA_intronic
CAediting_246808chr2_227709376_-ncRNA_intronic
CAediting_246809chr2_227709377_-ncRNA_intronic
CAediting_246810chr2_227709385_-ncRNA_intronic
CAediting_246811chr2_227709402_-ncRNA_intronic
CAediting_246812chr2_227709416_-ncRNA_intronic
CAediting_246813chr2_227709478_-ncRNA_intronic
CAediting_246814chr2_227710479_-ncRNA_intronic
CAediting_246815chr2_227710485_-ncRNA_intronic
CAediting_246816chr2_227710491_-ncRNA_intronic
CAediting_246817chr2_227710492_-ncRNA_intronic
CAediting_246818chr2_227710533_-ncRNA_intronic
CAediting_246819chr2_227710541_-ncRNA_intronic
CAediting_246820chr2_227710548_-ncRNA_intronic
CAediting_246821chr2_227712169_-ncRNA_intronic
CAediting_246822chr2_227713160_-ncRNA_intronic
CAediting_246823chr2_227713210_-ncRNA_intronic
CAediting_246824chr2_227713281_-ncRNA_intronic
CAediting_246825chr2_227713291_-ncRNA_intronic
CAediting_246826chr2_227713319_-ncRNA_intronic
CAediting_246827chr2_227713368_-ncRNA_intronic
CAediting_246828chr2_227714872_-ncRNA_intronic
CAediting_246829chr2_227714912_-ncRNA_intronic
CAediting_246830chr2_227714916_-ncRNA_intronic
CAediting_246831chr2_227714917_-ncRNA_intronic
CAediting_246832chr2_227714948_-ncRNA_intronic
CAediting_246833chr2_227714980_-ncRNA_intronic
CAediting_246834chr2_227714984_-ncRNA_intronic
CAediting_246835chr2_227714987_-ncRNA_intronic
CAediting_246836chr2_227714988_-ncRNA_intronic
CAediting_246837chr2_227714989_-ncRNA_intronic
CAediting_246838chr2_227714993_-ncRNA_intronic
CAediting_246839chr2_227715002_-ncRNA_intronic
CAediting_246840chr2_227715016_-ncRNA_intronic
CAediting_246841chr2_227715020_-ncRNA_intronic
CAediting_246842chr2_227715037_-ncRNA_intronic
CAediting_246843chr2_227715039_-ncRNA_intronic
CAediting_246844chr2_227715047_-ncRNA_intronic
CAediting_246845chr2_227715092_-ncRNA_intronic
CAediting_246846chr2_227715842_-ncRNA_intronic
CAediting_246847chr2_227715913_-ncRNA_intronic
CAediting_246848chr2_227717033_-ncRNA_intronic
CAediting_246849chr2_227717063_-ncRNA_intronic
CAediting_246850chr2_227717070_-ncRNA_intronic
CAediting_246851chr2_227717071_-ncRNA_intronic
CAediting_246852chr2_227717079_-ncRNA_intronic
CAediting_246853chr2_227717100_-ncRNA_intronic
CAediting_246854chr2_227717111_-ncRNA_intronic
CAediting_246855chr2_227717118_-ncRNA_intronic
CAediting_246856chr2_227717135_-ncRNA_intronic
CAediting_246857chr2_227717140_-ncRNA_intronic
CAediting_246858chr2_227717141_-ncRNA_intronic
CAediting_246859chr2_227717167_-ncRNA_intronic
CAediting_246860chr2_227717170_-ncRNA_intronic
CAediting_246861chr2_227717171_-ncRNA_intronic
CAediting_246862chr2_227717172_-ncRNA_intronic
CAediting_246863chr2_227717173_-ncRNA_intronic
CAediting_246864chr2_227717178_-ncRNA_intronic
CAediting_246865chr2_227717179_-ncRNA_intronic
CAediting_246866chr2_227717180_-ncRNA_intronic
CAediting_246867chr2_227717185_-ncRNA_intronic
CAediting_246868chr2_227717215_-ncRNA_intronic
CAediting_246869chr2_227717225_-ncRNA_intronic
CAediting_246870chr2_227717234_-ncRNA_intronic
CAediting_246871chr2_227717274_-ncRNA_intronic
CAediting_246872chr2_227717275_-ncRNA_intronic
CAediting_246873chr2_227717283_-ncRNA_intronic
CAediting_246874chr2_227717291_-ncRNA_intronic
CAediting_246875chr2_227717297_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_246629chr2_227685634_-SINEAluFLAM_C
CAediting_246630chr2_227685662_-SINEAluFLAM_C
CAediting_246631chr2_227685692_-SINEAluFLAM_C
CAediting_246632chr2_227685694_-SINEAluFLAM_C
CAediting_246633chr2_227685938_-SINEAluAluSx
CAediting_246634chr2_227685940_-SINEAluAluSx
CAediting_246635chr2_227685945_-SINEAluAluSx
CAediting_246636chr2_227685952_-SINEAluAluSx
CAediting_246637chr2_227685953_-SINEAluAluSx
CAediting_246638chr2_227685992_-SINEAluAluSx
CAediting_246639chr2_227685993_-SINEAluAluSx
CAediting_246640chr2_227685994_-SINEAluAluSx
CAediting_246641chr2_227686005_-SINEAluAluSx
CAediting_246642chr2_227686015_-SINEAluAluSx
CAediting_246643chr2_227686017_-SINEAluAluSx
CAediting_246644chr2_227686029_-SINEAluAluSx
CAediting_246645chr2_227686034_-SINEAluAluSx
CAediting_246646chr2_227686040_-SINEAluAluSx
CAediting_246647chr2_227686048_-SINEAluAluSx
CAediting_246648chr2_227686065_-SINEAluAluSx
CAediting_246649chr2_227686085_-SINEAluAluSx
CAediting_246650chr2_227686088_-SINEAluAluSx
CAediting_246651chr2_227686089_-SINEAluAluSx
CAediting_246652chr2_227686097_-SINEAluAluSx
CAediting_246653chr2_227686102_-SINEAluAluSx
CAediting_246654chr2_227686115_-SINEAluAluSx
CAediting_246655chr2_227686134_-SINEAluAluSx
CAediting_246656chr2_227686135_-SINEAluAluSx
CAediting_246657chr2_227686140_-SINEAluAluSx
CAediting_246658chr2_227686158_-SINEAluAluSx
CAediting_246659chr2_227686163_-SINEAluAluSx
CAediting_246660chr2_227686164_-SINEAluAluSx
CAediting_246661chr2_227686357_-SINEAluAluJr
CAediting_246662chr2_227686391_-SINEAluAluJr
CAediting_246663chr2_227686395_-SINEAluAluJr
CAediting_246664chr2_227686404_-SINEAluAluJr
CAediting_246665chr2_227686408_-SINEAluAluJr
CAediting_246666chr2_227686411_-SINEAluAluJr
CAediting_246667chr2_227686416_-SINEAluAluJr
CAediting_246668chr2_227686435_-SINEAluAluJr
CAediting_246669chr2_227686440_-SINEAluAluJr
CAediting_246670chr2_227686447_-SINEAluAluJr
CAediting_246671chr2_227686457_-SINEAluAluJr
CAediting_246672chr2_227686475_-SINEAluAluJr
CAediting_246673chr2_227686483_-SINEAluAluJr
CAediting_246674chr2_227686486_-SINEAluAluJr
CAediting_246675chr2_227686487_-SINEAluAluJr
CAediting_246676chr2_227686488_-SINEAluAluJr
CAediting_246677chr2_227686490_-SINEAluAluJr
CAediting_246678chr2_227686494_-SINEAluAluJr
CAediting_246679chr2_227686496_-SINEAluAluJr
CAediting_246680chr2_227686497_-SINEAluAluJr
CAediting_246681chr2_227686498_-SINEAluAluJr
CAediting_246682chr2_227686499_-SINEAluAluJr
CAediting_246683chr2_227686522_-SINEAluAluJr
CAediting_246684chr2_227686532_-SINEAluAluJr
CAediting_246685chr2_227686535_-SINEAluAluJr
CAediting_246686chr2_227686537_-SINEAluAluJr
CAediting_246687chr2_227686538_-SINEAluAluJr
CAediting_246688chr2_227686544_-SINEAluAluJr
CAediting_246689chr2_227686546_-SINEAluAluJr
CAediting_246690chr2_227686551_-SINEAluAluJr
CAediting_246691chr2_227686570_-SINEAluAluJr
CAediting_246692chr2_227686575_-SINEAluAluJr
CAediting_246693chr2_227686586_-SINEAluAluJr
CAediting_246694chr2_227686591_-SINEAluAluJr
CAediting_246695chr2_227686592_-SINEAluAluJr
CAediting_246696chr2_227686600_-SINEAluAluJr
CAediting_246697chr2_227686608_-SINEAluAluJr
CAediting_246698chr2_227686614_-SINEAluAluJr
CAediting_246699chr2_227694180_-SINEAluAluSx1
CAediting_246700chr2_227694256_-SINEAluAluSx1
CAediting_246701chr2_227694274_-SINEAluAluSx1
CAediting_246702chr2_227694977_-SINEAluAluJo
CAediting_246703chr2_227695385_-SINEAluAluJb
CAediting_246704chr2_227695400_-SINEAluAluJb
CAediting_246705chr2_227695444_-SINEAluAluJb
CAediting_246706chr2_227695477_-SINEAluAluJb
CAediting_246707chr2_227695508_-SINEAluAluJb
CAediting_246708chr2_227696892_-SINEAluAluSx1
CAediting_246709chr2_227699908_-SINEAluAluSx1
CAediting_246710chr2_227699930_-SINEAluAluSx1
CAediting_246711chr2_227699946_-SINEAluAluSx1
CAediting_246712chr2_227699974_-SINEAluAluSx1
CAediting_246713chr2_227699991_-SINEAluAluSx1
CAediting_246714chr2_227700006_-SINEAluAluSx1
CAediting_246715chr2_227700015_-SINEAluAluSx1
CAediting_246716chr2_227700016_-SINEAluAluSx1
CAediting_246717chr2_227700042_-SINEAluAluSx1
CAediting_246718chr2_227700089_-SINEAluAluSx1
CAediting_246719chr2_227700416_-SINEAluAluSg
CAediting_246720chr2_227701527_-SINEAluAluSz
CAediting_246721chr2_227702429_-SINEAluAluSx1
CAediting_246722chr2_227702451_-SINEAluAluSx1
CAediting_246723chr2_227702461_-SINEAluAluSx1
CAediting_246724chr2_227702470_-SINEAluAluSx1
CAediting_246725chr2_227702477_-SINEAluAluSx1
CAediting_246726chr2_227702509_-SINEAluAluSx1
CAediting_246727chr2_227702531_-SINEAluAluSx1
CAediting_246728chr2_227702532_-SINEAluAluSx1
CAediting_246729chr2_227702542_-SINEAluAluSx1
CAediting_246730chr2_227702558_-SINEAluAluSx1
CAediting_246731chr2_227702575_-SINEAluAluSx1
CAediting_246732chr2_227702596_-SINEAluAluSx1
CAediting_246733chr2_227702597_-SINEAluAluSx1
CAediting_246734chr2_227702609_-SINEAluAluSx1
CAediting_246735chr2_227702611_-SINEAluAluSx1
CAediting_246736chr2_227702612_-SINEAluAluSx1
CAediting_246737chr2_227704678_-SINEAluAluJb
CAediting_246738chr2_227704679_-SINEAluAluJb
CAediting_246739chr2_227704688_-SINEAluAluJb
CAediting_246740chr2_227704705_-SINEAluAluJb
CAediting_246741chr2_227704706_-SINEAluAluJb
CAediting_246742chr2_227704738_-SINEAluAluJb
CAediting_246743chr2_227704755_-SINEAluAluJb
CAediting_246744chr2_227704760_-SINEAluAluJb
CAediting_246745chr2_227704762_-SINEAluAluJb
CAediting_246746chr2_227704779_-SINEAluAluJb
CAediting_246747chr2_227704780_-SINEAluAluJb
CAediting_246748chr2_227704910_-SINEAluAluSx1
CAediting_246749chr2_227704947_-SINEAluAluSx1
CAediting_246750chr2_227704948_-SINEAluAluSx1
CAediting_246751chr2_227704953_-SINEAluAluSx1
CAediting_246752chr2_227704977_-SINEAluAluSx1
CAediting_246753chr2_227704978_-SINEAluAluSx1
CAediting_246754chr2_227704996_-SINEAluAluSx1
CAediting_246755chr2_227705079_-SINEAluAluSx1
CAediting_246756chr2_227705105_-SINEAluAluSx1
CAediting_246757chr2_227705383_-SINEAluFLAM_C
CAediting_246758chr2_227705384_-SINEAluFLAM_C
CAediting_246759chr2_227705398_-SINEAluFLAM_C
CAediting_246760chr2_227705429_-SINEAluFLAM_C
CAediting_246761chr2_227705932_-SINEAluAluJr
CAediting_246762chr2_227705940_-SINEAluAluJr
CAediting_246763chr2_227705948_-SINEAluAluJr
CAediting_246764chr2_227705953_-SINEAluAluJr
CAediting_246765chr2_227705965_-SINEAluAluJr
CAediting_246766chr2_227705966_-SINEAluAluJr
CAediting_246767chr2_227705986_-SINEAluAluJr
CAediting_246768chr2_227706007_-SINEAluAluJr
CAediting_246769chr2_227706010_-SINEAluAluJr
CAediting_246770chr2_227706526_-SINEAluAluSx1
CAediting_246771chr2_227706574_-SINEAluAluSx1
CAediting_246772chr2_227706591_-SINEAluAluSx1
CAediting_246773chr2_227706622_-SINEAluAluSx1
CAediting_246774chr2_227706623_-SINEAluAluSx1
CAediting_246775chr2_227706659_-SINEAluAluSx1
CAediting_246776chr2_227706662_-SINEAluAluSx1
CAediting_246777chr2_227706671_-SINEAluAluSx1
CAediting_246778chr2_227706684_-SINEAluAluSx1
CAediting_246779chr2_227706688_-SINEAluAluSx1
CAediting_246780chr2_227707322_-SINEAluAluSz
CAediting_246781chr2_227707328_-SINEAluAluSz
CAediting_246782chr2_227707367_-SINEAluAluSz
CAediting_246783chr2_227707388_-SINEAluAluSz
CAediting_246784chr2_227707461_-SINEAluAluSz
CAediting_246785chr2_227707471_-SINEAluAluSz
CAediting_246786chr2_227707475_-SINEAluAluSz
CAediting_246787chr2_227707483_-SINEAluAluSz
CAediting_246788chr2_227707488_-SINEAluAluSz
CAediting_246789chr2_227707531_-SINEAluAluSz
CAediting_246790chr2_227707794_-SINEAluAluSx1
CAediting_246791chr2_227707813_-SINEAluAluSx1
CAediting_246792chr2_227707839_-SINEAluAluSx1
CAediting_246793chr2_227707859_-SINEAluAluSx1
CAediting_246794chr2_227707865_-SINEAluAluSx1
CAediting_246795chr2_227707866_-SINEAluAluSx1
CAediting_246796chr2_227707876_-SINEAluAluSx1
CAediting_246797chr2_227707966_-SINEAluAluSx1
CAediting_246798chr2_227707974_-SINEAluAluSx1
CAediting_246799chr2_227707975_-SINEAluAluSx1
CAediting_246800chr2_227708499_-SINEAluAluJo
CAediting_246801chr2_227708516_-SINEAluAluJo
CAediting_246802chr2_227709264_-SINEAluAluSx1
CAediting_246803chr2_227709337_-SINEAluAluSx1
CAediting_246804chr2_227709350_-SINEAluAluSx1
CAediting_246805chr2_227709361_-SINEAluAluSx1
CAediting_246806chr2_227709363_-SINEAluAluSx1
CAediting_246807chr2_227709373_-SINEAluAluSx1
CAediting_246808chr2_227709376_-SINEAluAluSx1
CAediting_246809chr2_227709377_-SINEAluAluSx1
CAediting_246810chr2_227709385_-SINEAluAluSx1
CAediting_246811chr2_227709402_-SINEAluAluSx1
CAediting_246812chr2_227709416_-SINEAluAluSx1
CAediting_246813chr2_227709478_-SINEAluAluSx1
CAediting_246814chr2_227710479_-SINEAluAluSx
CAediting_246815chr2_227710485_-SINEAluAluSx
CAediting_246816chr2_227710491_-SINEAluAluSx
CAediting_246817chr2_227710492_-SINEAluAluSx
CAediting_246818chr2_227710533_-SINEAluAluSx
CAediting_246819chr2_227710541_-SINEAluAluSx
CAediting_246820chr2_227710548_-SINEAluAluSx
CAediting_246821chr2_227712169_-SINEAluAluJb
CAediting_246822chr2_227713160_-SINEAluAluJr4
CAediting_246823chr2_227713210_-SINEAluAluJr4
CAediting_246824chr2_227713281_-SINEAluAluJr4
CAediting_246825chr2_227713291_-SINEAluAluJr4
CAediting_246826chr2_227713319_-SINEAluAluJr4
CAediting_246827chr2_227713368_-SINEAluAluJr4
CAediting_246828chr2_227714872_-SINEAluAluSx1
CAediting_246829chr2_227714912_-SINEAluAluSx1
CAediting_246830chr2_227714916_-SINEAluAluSx1
CAediting_246831chr2_227714917_-SINEAluAluSx1
CAediting_246832chr2_227714948_-SINEAluAluSx1
CAediting_246833chr2_227714980_-SINEAluAluSx1
CAediting_246834chr2_227714984_-SINEAluAluSx1
CAediting_246835chr2_227714987_-SINEAluAluSx1
CAediting_246836chr2_227714988_-SINEAluAluSx1
CAediting_246837chr2_227714989_-SINEAluAluSx1
CAediting_246838chr2_227714993_-SINEAluAluSx1
CAediting_246839chr2_227715002_-SINEAluAluSx1
CAediting_246840chr2_227715016_-SINEAluAluSx1
CAediting_246841chr2_227715020_-SINEAluAluSx1
CAediting_246842chr2_227715037_-SINEAluAluSx1
CAediting_246843chr2_227715039_-SINEAluAluSx1
CAediting_246844chr2_227715047_-SINEAluAluSx1
CAediting_246845chr2_227715092_-SINEAluAluSx1
CAediting_246846chr2_227715842_-SINEAluAluJb
CAediting_246847chr2_227715913_-SINEAluAluJb
CAediting_246848chr2_227717033_-SINEAluAluSx1
CAediting_246849chr2_227717063_-SINEAluAluSx1
CAediting_246850chr2_227717070_-SINEAluAluSx1
CAediting_246851chr2_227717071_-SINEAluAluSx1
CAediting_246852chr2_227717079_-SINEAluAluSx1
CAediting_246853chr2_227717100_-SINEAluAluSx1
CAediting_246854chr2_227717111_-SINEAluAluSx1
CAediting_246855chr2_227717118_-SINEAluAluSx1
CAediting_246856chr2_227717135_-SINEAluAluSx1
CAediting_246857chr2_227717140_-SINEAluAluSx1
CAediting_246858chr2_227717141_-SINEAluAluSx1
CAediting_246859chr2_227717167_-SINEAluAluSx1
CAediting_246860chr2_227717170_-SINEAluAluSx1
CAediting_246861chr2_227717171_-SINEAluAluSx1
CAediting_246862chr2_227717172_-SINEAluAluSx1
CAediting_246863chr2_227717173_-SINEAluAluSx1
CAediting_246864chr2_227717178_-SINEAluAluSx1
CAediting_246865chr2_227717179_-SINEAluAluSx1
CAediting_246866chr2_227717180_-SINEAluAluSx1
CAediting_246867chr2_227717185_-SINEAluAluSx1
CAediting_246868chr2_227717215_-SINEAluAluSx1
CAediting_246869chr2_227717225_-SINEAluAluSx1
CAediting_246870chr2_227717234_-SINEAluAluSx1
CAediting_246871chr2_227717274_-SINEAluAluSx1
CAediting_246872chr2_227717275_-SINEAluAluSx1
CAediting_246873chr2_227717283_-SINEAluAluSx1
CAediting_246874chr2_227717291_-SINEAluAluSx1
CAediting_246875chr2_227717297_-SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for SLC19A3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
IRCAediting_246641chr2_227686005_-227686001:2276860233SS0+2iGGTTTCACAATGTTGGCCAGGCT0.51GGTTTCACAATGTTGGCCGGGCT-7.44
IRCAediting_246642chr2_227686015_-227686001:2276860233SS0+12iGGTTTCACAATGTTGGCCAGGCT0.51GGTTTCACGATGTTGGCCAGGCT-0.56
IRCAediting_246643chr2_227686017_-227686001:2276860233SS0+14iGGTTTCACAATGTTGGCCAGGCT0.51GGTTTCGCAATGTTGGCCAGGCT1.05
IRCAediting_246663chr2_227686395_-227686394:2276864025SS0+5iAGGCTACAG-5.13AGGCTACGG-0.41
IRCAediting_246688chr2_227686544_-227686543:2276865515SS0+5iAGGCCAGAG-15.15AGGCCAGGG-10.26
IRCAediting_246689chr2_227686546_-227686543:2276865515SS0+3iAGGCCAGAG-15.15AGGCCGGAG-20.69
IRCAediting_246690chr2_227686551_-227686543:2276865515SS3+0iAGGCCAGAG-15.15GGGCCAGAG-17.54

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000135917.12.SLC19A3.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000135917.12.SLC19A3.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC19A3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.
GBM.CAediting_246655.ENSG00000135917.SLC19A3.png
Soverview
TGCT.CAediting_246659.ENSG00000135917.SLC19A3.png
Soverview

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Protein coding region RNA A-to-I editings for SLC19A3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for SLC19A3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_246635chr2_227685945_-ENSG00000135917.12ENST00000409287hsa-miR-42672276859452276859517mer-m8227685944227685959149.00-20.64
CAediting_246635chr2_227685945_-ENSG00000135917.12ENST00000409287hsa-miR-79772276859432276859497mer-m8227685942227685959140.00-13.07
CAediting_246636chr2_227685952_-ENSG00000135917.12ENST00000409287hsa-miR-3189-3p2276859502276859578mer-1a227685950227685969145.00-25.98
CAediting_246636chr2_227685952_-ENSG00000135917.12ENST00000409287hsa-miR-44482276859482276859547mer-m8227685947227685966150.00-23.09
CAediting_246641chr2_227686005_-ENSG00000135917.12ENST00000409287hsa-miR-3940-3p2276860012276860077mer-m8227686000227686018144.00-24.53
CAediting_246649chr2_227686085_-ENSG00000135917.12ENST00000409287hsa-miR-3614-5p2276860852276860917mer-m8227686084227686108146.00-24.19
CAediting_246649chr2_227686085_-ENSG00000135917.12ENST00000409287hsa-miR-4691-3p2276860812276860877mer-m8227686080227686106152.00-28.24
CAediting_246650chr2_227686088_-ENSG00000135917.12ENST00000409287hsa-miR-6852-5p2276860872276860926mer227686086227686106148.00-26.63
CAediting_246637chr2_227685953_-ENSG00000135917.12ENST00000409287hsa-miR-3191-5p2276859502276859567mer-m8227685949227685970142.00-19.35
CAediting_246637chr2_227685953_-ENSG00000135917.12ENST00000409287hsa-miR-3262276859502276859578mer-1a227685950227685969140.00-14.76
CAediting_246637chr2_227685953_-ENSG00000135917.12ENST00000409287hsa-miR-330-5p2276859502276859578mer-1a227685950227685971140.00-22.94
CAediting_246637chr2_227685953_-ENSG00000135917.12ENST00000409287hsa-miR-43142276859522276859587mer-m8227685951227685968140.00-21.61
CAediting_246637chr2_227685953_-ENSG00000135917.12ENST00000409287hsa-miR-6817-3p2276859492276859557mer-m8227685948227685966140.00-14.71
CAediting_246638chr2_227685992_-ENSG00000135917.12ENST00000409287hsa-miR-28-5p2276859872276859937mer-m8227685986227686006143.00-18.76
CAediting_246638chr2_227685992_-ENSG00000135917.12ENST00000409287hsa-miR-31392276859872276859937mer-m8227685986227686008157.00-23.25
CAediting_246638chr2_227685992_-ENSG00000135917.12ENST00000409287hsa-miR-45382276859902276859956mer227685989227686011147.00-27.94
CAediting_246638chr2_227685992_-ENSG00000135917.12ENST00000409287hsa-miR-708-5p2276859872276859937mer-m8227685986227686007154.00-22.59
CAediting_246639chr2_227685993_-ENSG00000135917.12ENST00000409287hsa-miR-42942276859882276859947mer-m8227685987227686004150.00-18.29
CAediting_246639chr2_227685993_-ENSG00000135917.12ENST00000409287hsa-miR-43292276859922276859998mer-1a227685992227686010145.00-16.55
CAediting_246644chr2_227686029_-ENSG00000135917.12ENST00000409287hsa-miR-42862276860272276860348mer-1a227686027227686043143.00-17.17
CAediting_246644chr2_227686029_-ENSG00000135917.12ENST00000409287hsa-miR-43012276860292276860357mer-m8227686028227686047140.00-12.73
CAediting_246644chr2_227686029_-ENSG00000135917.12ENST00000409287hsa-miR-6729-3p2276860252276860317mer-m8227686024227686045141.00-16.74
CAediting_246646chr2_227686040_-ENSG00000135917.12ENST00000409287hsa-miR-48012276860392276860446mer227686038227686060146.00-16.72
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548ae-3p2276860432276860497mer-m8227686042227686063143.00-11.52
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548ae-3p2276860432276860497mer-m8227686042227686063143.00-11.52
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548ah-3p2276860432276860497mer-m8227686042227686061144.00-11.65
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548aj-3p2276860432276860497mer-m8227686042227686063143.00-9.41
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548aj-3p2276860432276860497mer-m8227686042227686063143.00-9.41
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548am-3p2276860432276860497mer-m8227686042227686061144.00-11.65
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548aq-3p2276860432276860497mer-m8227686042227686064143.00-11.90
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548j-3p2276860432276860497mer-m8227686042227686062141.00-11.52
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548x-3p2276860432276860497mer-m8227686042227686062143.00-9.41
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-548x-3p2276860432276860497mer-m8227686042227686062143.00-9.41
CAediting_246647chr2_227686048_-ENSG00000135917.12ENST00000409287hsa-miR-7844-5p2276860452276860517mer-m8227686044227686065164.00-22.69
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-6771-5p2276860882276860947mer-m8227686087227686106152.00-30.53
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-18272276860972276861048mer-1a227686097227686114159.00-19.12
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-4722-5p2276861012276861077mer-m8227686100227686127153.00-30.42
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-6765-5p2276860972276861026mer227686096227686117143.00-23.91
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-6808-5p2276860992276861057mer-m8227686098227686119155.00-22.13
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-6893-5p2276860992276861057mer-m8227686098227686119154.00-22.49
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-9402276860992276861057mer-m8227686098227686118141.00-16.59

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-let-7g-5p2276860972276861048mer-1a227686097227686118151-16.88
CAediting_246650chr2_227686088_-ENSG00000135917.12ENST00000409287hsa-miR-121262276860852276860928mer-1a227686085227686108147-12.83
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-121262276860852276860928mer-1a227686085227686108147-12.83
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-1273h-5p2276860882276860958mer-1a227686088227686108151-20.59
CAediting_246635chr2_227685945_-ENSG00000135917.12ENST00000409287hsa-miR-216a-5p2276859402276859478mer-1a227685940227685961155-17.82
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-30b-3p2276860882276860958mer-1a227686088227686109155-16.14
CAediting_246641chr2_227686005_-ENSG00000135917.12ENST00000409287hsa-miR-3190-5p2276860042276860107mer-m8227686003227686022147-18.44
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-3689a-3p2276860882276860958mer-1a227686088227686110150-18.5
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-3689b-3p2276860882276860958mer-1a227686088227686110150-18.55
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-3689c2276860882276860958mer-1a227686088227686110150-18.55
CAediting_246642chr2_227686015_-ENSG00000135917.12ENST00000409287hsa-miR-42892276860122276860187mer-m8227686011227686029153-16.66
CAediting_246643chr2_227686017_-ENSG00000135917.12ENST00000409287hsa-miR-42892276860122276860187mer-m8227686011227686029153-16.66
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-44582276860972276861048mer-1a227686097227686117149-20.51
CAediting_246652chr2_227686097_-ENSG00000135917.12ENST00000409287hsa-miR-44782276860932276860997mer-m8227686092227686107153-26.03
CAediting_246653chr2_227686102_-ENSG00000135917.12ENST00000409287hsa-miR-45002276860972276861048mer-1a227686097227686113147-15.01
CAediting_246652chr2_227686097_-ENSG00000135917.12ENST00000409287hsa-miR-485-5p2276860922276860987mer-m8227686091227686112149-17.51
CAediting_246641chr2_227686005_-ENSG00000135917.12ENST00000409287hsa-miR-548s2276860052276860117mer-m8227686004227686026149-12.59
CAediting_246649chr2_227686085_-ENSG00000135917.12ENST00000409287hsa-miR-56902276860812276860877mer-m8227686080227686100145-16.74
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-6779-5p2276860882276860958mer-1a227686088227686106152-23.37
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-6780a-5p2276860882276860958mer-1a227686088227686111144-22.45
CAediting_246635chr2_227685945_-ENSG00000135917.12ENST00000409287hsa-miR-6787-3p2276859432276859508mer-1a227685943227685963141-15.55
CAediting_246652chr2_227686097_-ENSG00000135917.12ENST00000409287hsa-miR-7160-5p2276860952276861017mer-m8227686094227686114150-19.41
CAediting_246652chr2_227686097_-ENSG00000135917.12ENST00000409287hsa-miR-7162-3p2276860962276861027mer-m8227686095227686113151-15.35
CAediting_246650chr2_227686088_-ENSG00000135917.12ENST00000409287hsa-miR-887-5p2276860882276860947mer-m8227686087227686108144-19.38
CAediting_246651chr2_227686089_-ENSG00000135917.12ENST00000409287hsa-miR-887-5p2276860882276860947mer-m8227686087227686108144-19.38

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for SLC19A3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000425817.4nonsense_mediated_decaySoverviewSoverview
ENST00000258403.6protein_codingSoverviewSoverview
ENST00000409287.4protein_codingSoverviewSoverview
ENST00000409456.2protein_codingSoverviewSoverview
ENST00000419059.1protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_246629ENST00000425817.4chr2_227685634_--1190.60-1189.20-1226.80
CAediting_246630ENST00000425817.4chr2_227685662_--1192.00-1189.20-1226.80
CAediting_246631ENST00000425817.4chr2_227685692_--1191.20-1189.20-1226.80
CAediting_246632ENST00000425817.4chr2_227685694_--1189.50-1189.20-1226.80
CAediting_246633ENST00000425817.4chr2_227685938_--1188.50-1189.20-1226.80
CAediting_246634ENST00000425817.4chr2_227685940_--1189.20-1189.20-1226.80
CAediting_246635ENST00000425817.4chr2_227685945_--1194.30-1189.20-1226.80
CAediting_246636ENST00000425817.4chr2_227685952_--1188.10-1189.20-1226.80
CAediting_246637ENST00000425817.4chr2_227685953_--1189.30-1189.20-1226.80
CAediting_246638ENST00000425817.4chr2_227685992_--1189.20-1189.20-1226.80
CAediting_246639ENST00000425817.4chr2_227685993_--1189.20-1189.20-1226.80
CAediting_246640ENST00000425817.4chr2_227685994_--1192.30-1189.20-1226.80
CAediting_246641ENST00000425817.4chr2_227686005_--1188.50-1189.20-1226.80
CAediting_246642ENST00000425817.4chr2_227686015_--1190.10-1189.20-1226.80
CAediting_246643ENST00000425817.4chr2_227686017_--1188.80-1189.20-1226.80
CAediting_246644ENST00000425817.4chr2_227686029_--1188.30-1189.20-1226.80
CAediting_246645ENST00000425817.4chr2_227686034_--1188.90-1189.20-1226.80
CAediting_246646ENST00000425817.4chr2_227686040_--1190.00-1189.20-1226.80
CAediting_246647ENST00000425817.4chr2_227686048_--1189.20-1189.20-1226.80
CAediting_246648ENST00000425817.4chr2_227686065_--1188.80-1189.20-1226.80
CAediting_246649ENST00000425817.4chr2_227686085_--1188.90-1189.20-1226.80
CAediting_246650ENST00000425817.4chr2_227686088_--1188.90-1189.20-1226.80
CAediting_246651ENST00000425817.4chr2_227686089_--1188.90-1189.20-1226.80
CAediting_246652ENST00000425817.4chr2_227686097_--1193.10-1189.20-1226.80
CAediting_246653ENST00000425817.4chr2_227686102_--1188.20-1189.20-1226.80
CAediting_246654ENST00000425817.4chr2_227686115_--1188.90-1189.20-1226.80
CAediting_246655ENST00000425817.4chr2_227686134_--1190.70-1189.20-1226.80
CAediting_246656ENST00000425817.4chr2_227686135_--1191.50-1189.20-1226.80
CAediting_246657ENST00000425817.4chr2_227686140_--1188.90-1189.20-1226.80
CAediting_246658ENST00000425817.4chr2_227686158_--1195.40-1189.20-1226.80
CAediting_246659ENST00000425817.4chr2_227686163_--1193.40-1189.20-1226.80
CAediting_246660ENST00000425817.4chr2_227686164_--1190.20-1189.20-1226.80
CAediting_246664ENST00000425817.4chr2_227686404_--1190.40-1189.20-1226.80
CAediting_246665ENST00000425817.4chr2_227686408_--1189.00-1189.20-1226.80
CAediting_246666ENST00000425817.4chr2_227686411_--1188.50-1189.20-1226.80
CAediting_246667ENST00000425817.4chr2_227686416_--1188.20-1189.20-1226.80
CAediting_246668ENST00000425817.4chr2_227686435_--1190.20-1189.20-1226.80
CAediting_246669ENST00000425817.4chr2_227686440_--1188.30-1189.20-1226.80
CAediting_246670ENST00000425817.4chr2_227686447_--1189.20-1189.20-1226.80
CAediting_246671ENST00000425817.4chr2_227686457_--1188.90-1189.20-1226.80
CAediting_246672ENST00000425817.4chr2_227686475_--1192.90-1189.20-1226.80
CAediting_246673ENST00000425817.4chr2_227686483_--1188.90-1189.20-1226.80
CAediting_246674ENST00000425817.4chr2_227686486_--1189.20-1189.20-1226.80
CAediting_246675ENST00000425817.4chr2_227686487_--1189.30-1189.20-1226.80
CAediting_246676ENST00000425817.4chr2_227686488_--1189.30-1189.20-1226.80
CAediting_246677ENST00000425817.4chr2_227686490_--1189.60-1189.20-1226.80
CAediting_246678ENST00000425817.4chr2_227686494_--1190.20-1189.20-1226.80
CAediting_246679ENST00000425817.4chr2_227686496_--1189.30-1189.20-1226.80
CAediting_246680ENST00000425817.4chr2_227686497_--1189.30-1189.20-1226.80
CAediting_246681ENST00000425817.4chr2_227686498_--1189.30-1189.20-1226.80
CAediting_246682ENST00000425817.4chr2_227686499_--1189.30-1189.20-1226.80
CAediting_246683ENST00000425817.4chr2_227686522_--1189.20-1189.20-1226.80
CAediting_246684ENST00000425817.4chr2_227686532_--1188.50-1189.20-1226.80
CAediting_246685ENST00000425817.4chr2_227686535_--1188.60-1189.20-1226.80
CAediting_246686ENST00000425817.4chr2_227686537_--1188.80-1189.20-1226.80
CAediting_246687ENST00000425817.4chr2_227686538_--1192.30-1189.20-1226.80
CAediting_246688ENST00000425817.4chr2_227686544_--1195.20-1189.20-1226.80
CAediting_246689ENST00000425817.4chr2_227686546_--1188.50-1189.20-1226.80
CAediting_246690ENST00000425817.4chr2_227686551_--1188.20-1189.20-1226.80
CAediting_246691ENST00000425817.4chr2_227686570_--1195.20-1189.20-1226.80
CAediting_246692ENST00000425817.4chr2_227686575_--1188.30-1189.20-1226.80
CAediting_246693ENST00000425817.4chr2_227686586_--1189.00-1189.20-1226.80
CAediting_246694ENST00000425817.4chr2_227686591_--1189.20-1189.20-1226.80
CAediting_246695ENST00000425817.4chr2_227686592_--1189.30-1189.20-1226.80
CAediting_246696ENST00000425817.4chr2_227686600_--1188.80-1189.20-1226.80
CAediting_246697ENST00000425817.4chr2_227686608_--1194.20-1189.20-1226.80
CAediting_246698ENST00000425817.4chr2_227686614_--1188.50-1189.20-1226.80
CAediting_246633ENST00000258403.6chr2_227685938_--1108.00-1108.70-1138.60
CAediting_246634ENST00000258403.6chr2_227685940_--1108.70-1108.70-1138.60
CAediting_246635ENST00000258403.6chr2_227685945_--1113.80-1108.70-1138.60
CAediting_246636ENST00000258403.6chr2_227685952_--1107.60-1108.70-1138.60
CAediting_246637ENST00000258403.6chr2_227685953_--1108.80-1108.70-1138.60
CAediting_246638ENST00000258403.6chr2_227685992_--1108.70-1108.70-1138.60
CAediting_246639ENST00000258403.6chr2_227685993_--1108.70-1108.70-1138.60
CAediting_246640ENST00000258403.6chr2_227685994_--1111.80-1108.70-1138.60
CAediting_246641ENST00000258403.6chr2_227686005_--1108.00-1108.70-1138.60
CAediting_246642ENST00000258403.6chr2_227686015_--1109.60-1108.70-1138.60
CAediting_246643ENST00000258403.6chr2_227686017_--1108.30-1108.70-1138.60
CAediting_246644ENST00000258403.6chr2_227686029_--1107.80-1108.70-1138.60
CAediting_246645ENST00000258403.6chr2_227686034_--1108.40-1108.70-1138.60
CAediting_246646ENST00000258403.6chr2_227686040_--1109.50-1108.70-1138.60
CAediting_246647ENST00000258403.6chr2_227686048_--1108.70-1108.70-1138.60
CAediting_246648ENST00000258403.6chr2_227686065_--1108.30-1108.70-1138.60
CAediting_246649ENST00000258403.6chr2_227686085_--1108.40-1108.70-1138.60
CAediting_246650ENST00000258403.6chr2_227686088_--1108.40-1108.70-1138.60
CAediting_246651ENST00000258403.6chr2_227686089_--1108.40-1108.70-1138.60
CAediting_246652ENST00000258403.6chr2_227686097_--1112.60-1108.70-1138.60
CAediting_246653ENST00000258403.6chr2_227686102_--1107.70-1108.70-1138.60
CAediting_246654ENST00000258403.6chr2_227686115_--1108.40-1108.70-1138.60
CAediting_246655ENST00000258403.6chr2_227686134_--1111.90-1108.70-1138.60
CAediting_246656ENST00000258403.6chr2_227686135_--1108.70-1108.70-1138.60
CAediting_246657ENST00000258403.6chr2_227686140_--1108.30-1108.70-1138.60
CAediting_246658ENST00000258403.6chr2_227686158_--1108.70-1108.70-1138.60
CAediting_246659ENST00000258403.6chr2_227686163_--1114.90-1108.70-1138.60
CAediting_246660ENST00000258403.6chr2_227686164_--1107.80-1108.70-1138.60
CAediting_246661ENST00000258403.6chr2_227686357_--1112.60-1108.70-1138.60
CAediting_246662ENST00000258403.6chr2_227686391_--1107.80-1108.70-1138.60
CAediting_246663ENST00000258403.6chr2_227686395_--1108.00-1108.70-1138.60
CAediting_246664ENST00000258403.6chr2_227686404_--1111.10-1108.70-1138.60
CAediting_246665ENST00000258403.6chr2_227686408_--1108.50-1108.70-1138.60
CAediting_246666ENST00000258403.6chr2_227686411_--1108.00-1108.70-1138.60
CAediting_246667ENST00000258403.6chr2_227686416_--1107.70-1108.70-1138.60
CAediting_246668ENST00000258403.6chr2_227686435_--1109.70-1108.70-1138.60
CAediting_246669ENST00000258403.6chr2_227686440_--1107.80-1108.70-1138.60
CAediting_246670ENST00000258403.6chr2_227686447_--1108.70-1108.70-1138.60
CAediting_246671ENST00000258403.6chr2_227686457_--1108.40-1108.70-1138.60
CAediting_246672ENST00000258403.6chr2_227686475_--1112.40-1108.70-1138.60
CAediting_246673ENST00000258403.6chr2_227686483_--1108.40-1108.70-1138.60
CAediting_246674ENST00000258403.6chr2_227686486_--1108.70-1108.70-1138.60
CAediting_246675ENST00000258403.6chr2_227686487_--1108.80-1108.70-1138.60
CAediting_246676ENST00000258403.6chr2_227686488_--1108.80-1108.70-1138.60
CAediting_246677ENST00000258403.6chr2_227686490_--1109.10-1108.70-1138.60
CAediting_246678ENST00000258403.6chr2_227686494_--1109.70-1108.70-1138.60
CAediting_246679ENST00000258403.6chr2_227686496_--1108.80-1108.70-1138.60
CAediting_246680ENST00000258403.6chr2_227686497_--1108.80-1108.70-1138.60
CAediting_246681ENST00000258403.6chr2_227686498_--1108.80-1108.70-1138.60
CAediting_246682ENST00000258403.6chr2_227686499_--1108.80-1108.70-1138.60
CAediting_246683ENST00000258403.6chr2_227686522_--1108.70-1108.70-1138.60
CAediting_246684ENST00000258403.6chr2_227686532_--1108.00-1108.70-1138.60
CAediting_246685ENST00000258403.6chr2_227686535_--1108.10-1108.70-1138.60
CAediting_246686ENST00000258403.6chr2_227686537_--1108.30-1108.70-1138.60
CAediting_246687ENST00000258403.6chr2_227686538_--1111.80-1108.70-1138.60
CAediting_246688ENST00000258403.6chr2_227686544_--1114.70-1108.70-1138.60
CAediting_246689ENST00000258403.6chr2_227686546_--1108.00-1108.70-1138.60
CAediting_246690ENST00000258403.6chr2_227686551_--1107.70-1108.70-1138.60
CAediting_246691ENST00000258403.6chr2_227686570_--1114.70-1108.70-1138.60
CAediting_246692ENST00000258403.6chr2_227686575_--1107.80-1108.70-1138.60
CAediting_246693ENST00000258403.6chr2_227686586_--1108.50-1108.70-1138.60
CAediting_246694ENST00000258403.6chr2_227686591_--1108.70-1108.70-1138.60
CAediting_246695ENST00000258403.6chr2_227686592_--1108.80-1108.70-1138.60
CAediting_246696ENST00000258403.6chr2_227686600_--1108.30-1108.70-1138.60
CAediting_246697ENST00000258403.6chr2_227686608_--1113.70-1108.70-1138.60
CAediting_246698ENST00000258403.6chr2_227686614_--1108.00-1108.70-1138.60
CAediting_246633ENST00000409287.4chr2_227685938_--195.80-196.50-230.40
CAediting_246634ENST00000409287.4chr2_227685940_--200.50-196.50-230.40
CAediting_246635ENST00000409287.4chr2_227685945_--196.20-196.50-230.40
CAediting_246636ENST00000409287.4chr2_227685952_--199.00-196.50-230.40
CAediting_246637ENST00000409287.4chr2_227685953_--199.00-196.50-230.40
CAediting_246638ENST00000409287.4chr2_227685992_--197.30-196.50-230.40
CAediting_246639ENST00000409287.4chr2_227685993_--198.80-196.50-230.40
CAediting_246640ENST00000409287.4chr2_227685994_--197.10-196.50-230.40
CAediting_246641ENST00000409287.4chr2_227686005_--195.80-196.50-230.40
CAediting_246642ENST00000409287.4chr2_227686015_--196.50-196.50-230.40
CAediting_246643ENST00000409287.4chr2_227686017_--196.50-196.50-230.40
CAediting_246644ENST00000409287.4chr2_227686029_--195.60-196.50-230.40
CAediting_246645ENST00000409287.4chr2_227686034_--196.20-196.50-230.40
CAediting_246646ENST00000409287.4chr2_227686040_--195.70-196.50-230.40
CAediting_246647ENST00000409287.4chr2_227686048_--197.30-196.50-230.40
CAediting_246648ENST00000409287.4chr2_227686065_--198.00-196.50-230.40
CAediting_246649ENST00000409287.4chr2_227686085_--200.80-196.50-230.40
CAediting_246650ENST00000409287.4chr2_227686088_--199.60-196.50-230.40
CAediting_246651ENST00000409287.4chr2_227686089_--196.70-196.50-230.40
CAediting_246652ENST00000409287.4chr2_227686097_--195.80-196.50-230.40
CAediting_246653ENST00000409287.4chr2_227686102_--196.50-196.50-230.40
CAediting_246654ENST00000409287.4chr2_227686115_--197.30-196.50-230.40
CAediting_246655ENST00000409287.4chr2_227686134_--196.90-196.50-230.40
CAediting_246656ENST00000409287.4chr2_227686135_--200.40-196.50-230.40
CAediting_246657ENST00000409287.4chr2_227686140_--196.10-196.50-230.40
CAediting_246658ENST00000409287.4chr2_227686158_--202.60-196.50-230.40
CAediting_246659ENST00000409287.4chr2_227686163_--197.00-196.50-230.40
CAediting_246660ENST00000409287.4chr2_227686164_--196.70-196.50-230.40
CAediting_246721ENST00000409456.2chr2_227702429_--160.30-158.90-173.90
CAediting_246722ENST00000409456.2chr2_227702451_--158.60-158.90-173.90
CAediting_246723ENST00000409456.2chr2_227702461_--158.80-158.90-173.90
CAediting_246724ENST00000409456.2chr2_227702470_--159.10-158.90-173.90
CAediting_246725ENST00000409456.2chr2_227702477_--160.90-158.90-173.90
CAediting_246726ENST00000409456.2chr2_227702509_--163.40-158.90-173.90
CAediting_246727ENST00000409456.2chr2_227702531_--158.90-158.90-173.90
CAediting_246728ENST00000409456.2chr2_227702532_--159.50-158.90-173.90
CAediting_246729ENST00000409456.2chr2_227702542_--161.60-158.90-173.90
CAediting_246730ENST00000409456.2chr2_227702558_--159.40-158.90-173.90
CAediting_246731ENST00000409456.2chr2_227702575_--161.40-158.90-173.90
CAediting_246732ENST00000409456.2chr2_227702596_--160.10-158.90-173.90
CAediting_246733ENST00000409456.2chr2_227702597_--159.00-158.90-173.90
CAediting_246734ENST00000409456.2chr2_227702609_--161.10-158.90-173.90
CAediting_246735ENST00000409456.2chr2_227702611_--159.60-158.90-173.90
CAediting_246736ENST00000409456.2chr2_227702612_--160.60-158.90-173.90
CAediting_246721ENST00000419059.1chr2_227702429_--201.40-202.00-216.90
CAediting_246722ENST00000419059.1chr2_227702451_--201.70-202.00-216.90
CAediting_246723ENST00000419059.1chr2_227702461_--201.90-202.00-216.90
CAediting_246724ENST00000419059.1chr2_227702470_--202.20-202.00-216.90
CAediting_246725ENST00000419059.1chr2_227702477_--202.72-202.00-216.90
CAediting_246726ENST00000419059.1chr2_227702509_--205.82-202.00-216.90
CAediting_246727ENST00000419059.1chr2_227702531_--203.10-202.00-216.90
CAediting_246728ENST00000419059.1chr2_227702532_--202.10-202.00-216.90
CAediting_246729ENST00000419059.1chr2_227702542_--203.12-202.00-216.90
CAediting_246730ENST00000419059.1chr2_227702558_--202.00-202.00-216.90
CAediting_246731ENST00000419059.1chr2_227702575_--203.00-202.00-216.90
CAediting_246732ENST00000419059.1chr2_227702596_--205.40-202.00-216.90
CAediting_246733ENST00000419059.1chr2_227702597_--203.00-202.00-216.90
CAediting_246734ENST00000419059.1chr2_227702609_--204.40-202.00-216.90
CAediting_246735ENST00000419059.1chr2_227702611_--202.00-202.00-216.90
CAediting_246736ENST00000419059.1chr2_227702612_--202.00-202.00-216.90

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Relation with ADAR for SLC19A3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LIHCCAediting_246631chr2_227685692_-0.002373118030288630.264338981068621....
OVCAediting_246631chr2_227685692_-0.0002710525719009770.33771178564661....
LIHCCAediting_246635chr2_227685945_-0.003919354483904580.301177769666831....
STADCAediting_246635chr2_227685945_-0.0007161987788544010.409061549934718....
BRCACAediting_246641chr2_227686005_-0.01849236684687920.325621826508756....
STADCAediting_246641chr2_227686005_-....0.03036058291727970.26091113890774
LIHCCAediting_246645chr2_227686034_-1.66392444614785e-050.320097878574043....
OVCAediting_246645chr2_227686034_-0.03977744290103330.237986960483788....
BRCACAediting_246650chr2_227686088_-0.02013891411801690.166315787777858....
LIHCCAediting_246650chr2_227686088_-5.9267875972206e-070.315073193320316....
STADCAediting_246650chr2_227686088_-0.001091502430570140.264110903180833....
OVCAediting_246650chr2_227686088_-0.03303916772894890.188565376956812....
PAADCAediting_246650chr2_227686088_-1.4156018203743e-050.469988854881801....
BRCACAediting_246655chr2_227686134_-0.004204717830035260.187270577773615..0.03660075453551710.13731865217671
COADCAediting_246655chr2_227686134_-....0.01512917806375830.189422491510437
SKCMCAediting_246655chr2_227686134_-0.02276815880403570.312386977922256....
TGCTCAediting_246655chr2_227686134_-..0.01742452252869510.319485210695383..
LIHCCAediting_246656chr2_227686135_-0.001190438689565060.253235708650627....
STADCAediting_246656chr2_227686135_-....5.78211336963518e-060.529393380357713
BRCACAediting_246659chr2_227686163_-0.002860609248549220.243509803724223....
COADCAediting_246659chr2_227686163_-0.04455306246811220.170677323517725....
PAADCAediting_246659chr2_227686163_-0.0007386184404616630.42057527723857....
LIHCCAediting_246662chr2_227686391_-0.04263927643535430.274382591827799....
BRCACAediting_246673chr2_227686483_-0.01909388985096570.160866816718865....
LIHCCAediting_246673chr2_227686483_-0.0007575533444507050.223916181199571....
GBMCAediting_246673chr2_227686483_-..0.002756462219554570.352592852519364..
OVCAediting_246673chr2_227686483_-0.004376805788998160.253255379156984....
LIHCCAediting_246687chr2_227686538_-6.6682603582133e-070.372399702621334....
STADCAediting_246687chr2_227686538_-0.01112091850091190.297604994730875....
LIHCCAediting_246694chr2_227686591_-0.04605019237475770.241011817641026....
LIHCCAediting_246695chr2_227686592_-4.61229848696325e-050.30544377037342....
STADCAediting_246695chr2_227686592_-0.005584992729608720.353563447295077....

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Relation with cancer stages for SLC19A3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
BRCApathologic_stageCAediting_246645chr2_227686034_-0.0281352088680802-0.257053871130217
KIRCpathologic_stageCAediting_246659chr2_227686163_-0.03724605626713650.256993085715242
KIRPclinical_stageCAediting_246659chr2_227686163_-0.03925742478577240.327288837185969
KIRPpathologic_stageCAediting_246655chr2_227686134_-0.03807177139734720.222784233176442
KIRPpathologic_stageCAediting_246659chr2_227686163_-0.001174501068182330.450106236503668
LIHCpathologic_stageCAediting_246631chr2_227685692_-0.0465189397080737-0.182104631388307
LIHCpathologic_stageCAediting_246655chr2_227686134_-0.0494897106386386-0.129122837056472
LIHCpathologic_stageCAediting_246694chr2_227686591_-0.002564498618276970.385549729535222
OVclinical_stageCAediting_246635chr2_227685945_-0.03412191039624490.281160244062246
OVclinical_stageCAediting_246645chr2_227686034_-0.03627733467741510.243863843808037

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Relation with survival for SLC19A3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for SLC19A3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for SLC19A3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
SLC19A3C0023264Leigh Disease10CLINGEN
SLC19A3C1838951LEIGH SYNDROME DUE TO MITOCHONDRIAL COMPLEX I DEFICIENCY10CLINGEN
SLC19A3C1850597Leigh Syndrome Due To Mitochondrial Complex II Deficiency10CLINGEN
SLC19A3C1850598Leigh Syndrome due to Mitochondrial Complex III Deficiency10CLINGEN
SLC19A3C1850599Leigh Syndrome due to Mitochondrial Complex IV Deficiency10CLINGEN
SLC19A3C1850600Leigh Syndrome due to Mitochondrial Complex V Deficiency10CLINGEN
SLC19A3C2931891Necrotizing encephalopathy, infantile subacute, of Leigh10CLINGEN
SLC19A3C1843807Basal ganglia disease, biotin-responsive4CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
SLC19A3C0004782Basal Ganglia Diseases1CTD_human
SLC19A3C0015371Extrapyramidal Disorders1CTD_human
SLC19A3C0750951Lenticulostriate Disorders1CTD_human