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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PUS1 (CAeditome ID:80324)

Gene summary for PUS1

check button Gene summary
Gene informationGene symbol

PUS1

Gene ID

80324

Gene namepseudouridine synthase 1
SynonymsMLASA1
Cytomap

12q24.33

Type of geneprotein-coding
DescriptiontRNA pseudouridine synthase Amitochondrial tRNA pseudouridine synthase Apseudouridylate synthase 1tRNA pseudouridine synthase A, mitochondrialtRNA pseudouridine(38-40) synthasetRNA pseudouridylate synthase ItRNA uridine isomerase I
Modification date20210518
UniProtAcc

Q9Y606

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
PUS1

GO:0000049

tRNA pseudouridine synthase A

23707380

PUS1

GO:0002153

tRNA pseudouridine synthase A

24722331

PUS1

GO:0009982

tRNA pseudouridine synthase A

31477916

PUS1

GO:1990481

tRNA pseudouridine synthase A

31477916

PUS1

GO:0005654

tRNA pseudouridine synthase A

0000052

PUS1

GO:0005739

tRNA pseudouridine synthase A

0000052

PUS1

GO:0005739

tRNA pseudouridine synthase A

28082677


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RNA A-to-I events for PUS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000177192.12

check button RNA A-to-I editing events in Cancer.
CAediting_948129(131930757, +), CAediting_948130(131931381, +), CAediting_948131(131931728, +), CAediting_948132(131931731, +), CAediting_948133(131931791, +), CAediting_948134(131931792, +), CAediting_948135(131931807, +), CAediting_948136(131932042, +), CAediting_948137(131932049, +), CAediting_948138(131932055, +), CAediting_948139(131932056, +), CAediting_948140(131932117, +), CAediting_948141(131932720, +), CAediting_948142(131932726, +), CAediting_948143(131932729, +), CAediting_948144(131932758, +), CAediting_948145(131932777, +), CAediting_948146(131932788, +), CAediting_948147(131932802, +), CAediting_948148(131932803, +), CAediting_948149(131932820, +), CAediting_948150(131933166, +), CAediting_948151(131933251, +), CAediting_948152(131933315, +), CAediting_948153(131935553, +), CAediting_948154(131935663, +), CAediting_948155(131935673, +), CAediting_948156(131935716, +), CAediting_948157(131935807, +), CAediting_948158(131935955, +), CAediting_948159(131935956, +), CAediting_948160(131935977, +), CAediting_948161(131935978, +), CAediting_948162(131936001, +), CAediting_948163(131936005, +), CAediting_948164(131936009, +), CAediting_948165(131936010, +), CAediting_948166(131936015, +), CAediting_948167(131936025, +), CAediting_948168(131936035, +), CAediting_948169(131936046, +), CAediting_948170(131936050, +), CAediting_948171(131936051, +), CAediting_948172(131936055, +), CAediting_948173(131936058, +), CAediting_948174(131936064, +), CAediting_948175(131936090, +), CAediting_948176(131936091, +), CAediting_948177(131936096, +), CAediting_948178(131936100, +), CAediting_948179(131936104, +), CAediting_948180(131936107, +), CAediting_948181(131936117, +), CAediting_948182(131936122, +), CAediting_948183(131936123, +), CAediting_948184(131936132, +), CAediting_948185(131936152, +), CAediting_948186(131936155, +), CAediting_948187(131936156, +), CAediting_948188(131936343, +), CAediting_948189(131936361, +), CAediting_948190(131936362, +), CAediting_948191(131936367, +), CAediting_948192(131936401, +), CAediting_948193(131936402, +), CAediting_948194(131936469, +), CAediting_948195(131936489, +), CAediting_948196(131936504, +), CAediting_948197(131936584, +), CAediting_948198(131936625, +), CAediting_948199(131936633, +), CAediting_948200(131936634, +), CAediting_948201(131936640, +), CAediting_948202(131936655, +), CAediting_948203(131936657, +), CAediting_948204(131936674, +), CAediting_948205(131936679, +), CAediting_948206(131936682, +), CAediting_948207(131936688, +), CAediting_948208(131936690, +), CAediting_948209(131936693, +), CAediting_948210(131936702, +), CAediting_948211(131936710, +), CAediting_948212(131936711, +), CAediting_948213(131936712, +), CAediting_948214(131936713, +), CAediting_948215(131936724, +), CAediting_948216(131936727, +), CAediting_948217(131936728, +), CAediting_948218(131936729, +), CAediting_948219(131936733, +), CAediting_948220(131936736, +), CAediting_948221(131936739, +), CAediting_948222(131936742, +), CAediting_948223(131936746, +), CAediting_948224(131936762, +), CAediting_948225(131936768, +), CAediting_948226(131936769, +), CAediting_948227(131936778, +), CAediting_948228(131936785, +), CAediting_948229(131936795, +), CAediting_948230(131936801, +), CAediting_948231(131936814, +), CAediting_948232(131936817, +), CAediting_948233(131937430, +), CAediting_948234(131937431, +), CAediting_948235(131937436, +), CAediting_948236(131937445, +), CAediting_948237(131937474, +), CAediting_948238(131937475, +), CAediting_948239(131937492, +), CAediting_948240(131937536, +), CAediting_948241(131937540, +), CAediting_948242(131937541, +), CAediting_948243(131937550, +), CAediting_948244(131937556, +), CAediting_948245(131937559, +), CAediting_948246(131937560, +), CAediting_948247(131937562, +), CAediting_948248(131937563, +), CAediting_948249(131937573, +), CAediting_948250(131937585, +), CAediting_948251(131937590, +), CAediting_948252(131937597, +), CAediting_948253(131937598, +), CAediting_948254(131937610, +), CAediting_948255(131937637, +), CAediting_948256(131937638, +), CAediting_948257(131937660, +), CAediting_948258(131937731, +), CAediting_948259(131937735, +), CAediting_948260(131937780, +), CAediting_948261(131937781, +), CAediting_948262(131937784, +), CAediting_948263(131938170, +), CAediting_948264(131938182, +), CAediting_948265(131938188, +), CAediting_948266(131938189, +), CAediting_948267(131938194, +), CAediting_948268(131938197, +), CAediting_948269(131938218, +), CAediting_948270(131938224, +), CAediting_948271(131938229, +), CAediting_948272(131938234, +), CAediting_948273(131938237, +), CAediting_948274(131938257, +), CAediting_948275(131938258, +), CAediting_948276(131938262, +), CAediting_948277(131938265, +), CAediting_948278(131938266, +), CAediting_948279(131938279, +), CAediting_948280(131938281, +), CAediting_948281(131938283, +), CAediting_948282(131938284, +), CAediting_948283(131938285, +), CAediting_948284(131938287, +), CAediting_948285(131938292, +), CAediting_948286(131938298, +), CAediting_948287(131938302, +), CAediting_948288(131938306, +), CAediting_948289(131938324, +), CAediting_948290(131938334, +), CAediting_948291(131938341, +), CAediting_948292(131938354, +), CAediting_948293(131938364, +), CAediting_948294(131938365, +), CAediting_948295(131938366, +), CAediting_948296(131938378, +), CAediting_948297(131938379, +), CAediting_948298(131938389, +), CAediting_948299(131938390, +), CAediting_948300(131938394, +), CAediting_948301(131938395, +), CAediting_948302(131938411, +), CAediting_948303(131938435, +), CAediting_948304(131938765, +), CAediting_948305(131938783, +), CAediting_948306(131938791, +), CAediting_948307(131938801, +), CAediting_948308(131938826, +), CAediting_948309(131938839, +), CAediting_948310(131938848, +), CAediting_948311(131938851, +), CAediting_948312(131938887, +), CAediting_948313(131938888, +), CAediting_948314(131938906, +), CAediting_948315(131938928, +), CAediting_948316(131938943, +), CAediting_948317(131938952, +), CAediting_948318(131938957, +), CAediting_948319(131938980, +), CAediting_948320(131939002, +), CAediting_948321(131939015, +), CAediting_948322(131939031, +), CAediting_948323(131939694, +), CAediting_948324(131939729, +), CAediting_948325(131939754, +), CAediting_948326(131939765, +), CAediting_948327(131939777, +), CAediting_948328(131939778, +), CAediting_948329(131939787, +), CAediting_948330(131940056, +), CAediting_948331(131940097, +), CAediting_948332(131940102, +), CAediting_948333(131940107, +), CAediting_948334(131940119, +), CAediting_948335(131940132, +), CAediting_948336(131940133, +), CAediting_948337(131940168, +), CAediting_948338(131940202, +), CAediting_948339(131940214, +), CAediting_948340(131940231, +), CAediting_948341(131940240, +), CAediting_948342(131940283, +), CAediting_948343(131940292, +), CAediting_948344(131940293, +), CAediting_948345(131940305, +), CAediting_948346(131940311, +), CAediting_948347(131940581, +), CAediting_948348(131940596, +), CAediting_948349(131940621, +), CAediting_948350(131940642, +), CAediting_948351(131940652, +), CAediting_948352(131940664, +), CAediting_948353(131940681, +), CAediting_948354(131940682, +), CAediting_948355(131940694, +), CAediting_948356(131940699, +), CAediting_948357(131940711, +), CAediting_948358(131940734, +), CAediting_948359(131940747, +), CAediting_948360(131940748, +), CAediting_948361(131940756, +), CAediting_948362(131940762, +), CAediting_948363(131940765, +), CAediting_948364(131940787, +), CAediting_948365(131940793, +), CAediting_948366(131940795, +), CAediting_948367(131940807, +), CAediting_948368(131940816, +), CAediting_948369(131940834, +), CAediting_948370(131940835, +), CAediting_948371(131940847, +), CAediting_948372(131944001, +), CAediting_948373(131944022, +), CAediting_948374(131944046, +), CAediting_948375(131944048, +), CAediting_948376(131944051, +), CAediting_948377(131944117, +), CAediting_948378(131944122, +), CAediting_948379(131944130, +), CAediting_948380(131944236, +), CAediting_948381(131944259, +), CAediting_948382(131944334, +), CAediting_948383(131944338, +), CAediting_948384(131944349, +), CAediting_948385(131944361, +), CAediting_948386(131944393, +), CAediting_948387(131944394, +), CAediting_948388(131944403, +), CAediting_948389(131944463, +), CAediting_948390(131945552, +), CAediting_948391(131945561, +), CAediting_948392(131945571, +), CAediting_948393(131945596, +), CAediting_948394(131945597, +), CAediting_948395(131945621, +), CAediting_948396(131945631, +), CAediting_948397(131945636, +), CAediting_948398(131945652, +), CAediting_948399(131945680, +), CAediting_948400(131945684, +), CAediting_948401(131945686, +), CAediting_948402(131945694, +), CAediting_948403(131945697, +), CAediting_948404(131945717, +), CAediting_948405(131945731, +), CAediting_948406(131945740, +), CAediting_948407(131945757, +), CAediting_948408(131945758, +), CAediting_948409(131945759, +), CAediting_948410(131945780, +),

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RNA editing positional annotations for PUS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_948142chr12_131932726_+nonsynonymous SNVENST00000456665.5c.A362Gp.Q121RD.N
CAediting_948142chr12_131932726_+nonsynonymous SNVENST00000537484.1c.A362Gp.Q121RD.N
CAediting_948142chr12_131932726_+nonsynonymous SNVENST00000544213.4c.A446Gp.Q149RD.N
CAediting_948144chr12_131932758_+nonsynonymous SNVENST00000456665.5c.A394Gp.S132GD.N
CAediting_948144chr12_131932758_+nonsynonymous SNVENST00000537484.1c.A394Gp.S132GD.N
CAediting_948144chr12_131932758_+nonsynonymous SNVENST00000544213.4c.A478Gp.S160GD.N
CAediting_948145chr12_131932777_+nonsynonymous SNVENST00000456665.5c.A413Gp.H138RD.N
CAediting_948145chr12_131932777_+nonsynonymous SNVENST00000537484.1c.A413Gp.H138RD.N
CAediting_948145chr12_131932777_+nonsynonymous SNVENST00000544213.4c.A497Gp.H166RD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_948129chr12_131930757_+ncRNA_intronic
CAediting_948130chr12_131931381_+ncRNA_intronic
CAediting_948131chr12_131931728_+ncRNA_intronic
CAediting_948132chr12_131931731_+ncRNA_intronic
CAediting_948133chr12_131931791_+ncRNA_intronic
CAediting_948134chr12_131931792_+ncRNA_intronic
CAediting_948135chr12_131931807_+ncRNA_intronic
CAediting_948136chr12_131932042_+exonic
CAediting_948137chr12_131932049_+exonic
CAediting_948138chr12_131932055_+exonic
CAediting_948139chr12_131932056_+exonic
CAediting_948140chr12_131932117_+exonic
CAediting_948141chr12_131932720_+splicing
CAediting_948142chr12_131932726_+exonic
CAediting_948143chr12_131932729_+exonic
CAediting_948144chr12_131932758_+exonic
CAediting_948145chr12_131932777_+exonic
CAediting_948146chr12_131932788_+exonic
CAediting_948147chr12_131932802_+exonic
CAediting_948148chr12_131932803_+exonic
CAediting_948149chr12_131932820_+exonic
CAediting_948150chr12_131933166_+intronic
CAediting_948151chr12_131933251_+intronic
CAediting_948152chr12_131933315_+intronic
CAediting_948153chr12_131935553_+intronic
CAediting_948154chr12_131935663_+intronic
CAediting_948155chr12_131935673_+intronic
CAediting_948156chr12_131935716_+intronic
CAediting_948157chr12_131935807_+intronic
CAediting_948158chr12_131935955_+intronic
CAediting_948159chr12_131935956_+intronic
CAediting_948160chr12_131935977_+intronic
CAediting_948161chr12_131935978_+intronic
CAediting_948162chr12_131936001_+intronic
CAediting_948163chr12_131936005_+intronic
CAediting_948164chr12_131936009_+intronic
CAediting_948165chr12_131936010_+intronic
CAediting_948166chr12_131936015_+intronic
CAediting_948167chr12_131936025_+intronic
CAediting_948168chr12_131936035_+intronic
CAediting_948169chr12_131936046_+intronic
CAediting_948170chr12_131936050_+intronic
CAediting_948171chr12_131936051_+intronic
CAediting_948172chr12_131936055_+intronic
CAediting_948173chr12_131936058_+intronic
CAediting_948174chr12_131936064_+intronic
CAediting_948175chr12_131936090_+intronic
CAediting_948176chr12_131936091_+intronic
CAediting_948177chr12_131936096_+intronic
CAediting_948178chr12_131936100_+intronic
CAediting_948179chr12_131936104_+intronic
CAediting_948180chr12_131936107_+intronic
CAediting_948181chr12_131936117_+intronic
CAediting_948182chr12_131936122_+intronic
CAediting_948183chr12_131936123_+intronic
CAediting_948184chr12_131936132_+intronic
CAediting_948185chr12_131936152_+intronic
CAediting_948186chr12_131936155_+intronic
CAediting_948187chr12_131936156_+intronic
CAediting_948188chr12_131936343_+intronic
CAediting_948189chr12_131936361_+intronic
CAediting_948190chr12_131936362_+intronic
CAediting_948191chr12_131936367_+intronic
CAediting_948192chr12_131936401_+intronic
CAediting_948193chr12_131936402_+intronic
CAediting_948194chr12_131936469_+intronic
CAediting_948195chr12_131936489_+intronic
CAediting_948196chr12_131936504_+intronic
CAediting_948197chr12_131936584_+intronic
CAediting_948198chr12_131936625_+intronic
CAediting_948199chr12_131936633_+intronic
CAediting_948200chr12_131936634_+intronic
CAediting_948201chr12_131936640_+intronic
CAediting_948202chr12_131936655_+intronic
CAediting_948203chr12_131936657_+intronic
CAediting_948204chr12_131936674_+intronic
CAediting_948205chr12_131936679_+intronic
CAediting_948206chr12_131936682_+intronic
CAediting_948207chr12_131936688_+intronic
CAediting_948208chr12_131936690_+intronic
CAediting_948209chr12_131936693_+intronic
CAediting_948210chr12_131936702_+intronic
CAediting_948211chr12_131936710_+intronic
CAediting_948212chr12_131936711_+intronic
CAediting_948213chr12_131936712_+intronic
CAediting_948214chr12_131936713_+intronic
CAediting_948215chr12_131936724_+intronic
CAediting_948216chr12_131936727_+intronic
CAediting_948217chr12_131936728_+intronic
CAediting_948218chr12_131936729_+intronic
CAediting_948219chr12_131936733_+intronic
CAediting_948220chr12_131936736_+intronic
CAediting_948221chr12_131936739_+intronic
CAediting_948222chr12_131936742_+intronic
CAediting_948223chr12_131936746_+intronic
CAediting_948224chr12_131936762_+intronic
CAediting_948225chr12_131936768_+intronic
CAediting_948226chr12_131936769_+intronic
CAediting_948227chr12_131936778_+intronic
CAediting_948228chr12_131936785_+intronic
CAediting_948229chr12_131936795_+intronic
CAediting_948230chr12_131936801_+intronic
CAediting_948231chr12_131936814_+intronic
CAediting_948232chr12_131936817_+intronic
CAediting_948233chr12_131937430_+intronic
CAediting_948234chr12_131937431_+intronic
CAediting_948235chr12_131937436_+intronic
CAediting_948236chr12_131937445_+intronic
CAediting_948237chr12_131937474_+intronic
CAediting_948238chr12_131937475_+intronic
CAediting_948239chr12_131937492_+intronic
CAediting_948240chr12_131937536_+intronic
CAediting_948241chr12_131937540_+intronic
CAediting_948242chr12_131937541_+intronic
CAediting_948243chr12_131937550_+intronic
CAediting_948244chr12_131937556_+intronic
CAediting_948245chr12_131937559_+intronic
CAediting_948246chr12_131937560_+intronic
CAediting_948247chr12_131937562_+intronic
CAediting_948248chr12_131937563_+intronic
CAediting_948249chr12_131937573_+intronic
CAediting_948250chr12_131937585_+intronic
CAediting_948251chr12_131937590_+intronic
CAediting_948252chr12_131937597_+intronic
CAediting_948253chr12_131937598_+intronic
CAediting_948254chr12_131937610_+intronic
CAediting_948255chr12_131937637_+intronic
CAediting_948256chr12_131937638_+intronic
CAediting_948257chr12_131937660_+intronic
CAediting_948258chr12_131937731_+intronic
CAediting_948259chr12_131937735_+intronic
CAediting_948260chr12_131937780_+intronic
CAediting_948261chr12_131937781_+intronic
CAediting_948262chr12_131937784_+intronic
CAediting_948263chr12_131938170_+intronic
CAediting_948264chr12_131938182_+intronic
CAediting_948265chr12_131938188_+intronic
CAediting_948266chr12_131938189_+intronic
CAediting_948267chr12_131938194_+intronic
CAediting_948268chr12_131938197_+intronic
CAediting_948269chr12_131938218_+intronic
CAediting_948270chr12_131938224_+intronic
CAediting_948271chr12_131938229_+intronic
CAediting_948272chr12_131938234_+intronic
CAediting_948273chr12_131938237_+intronic
CAediting_948274chr12_131938257_+intronic
CAediting_948275chr12_131938258_+intronic
CAediting_948276chr12_131938262_+intronic
CAediting_948277chr12_131938265_+intronic
CAediting_948278chr12_131938266_+intronic
CAediting_948279chr12_131938279_+intronic
CAediting_948280chr12_131938281_+intronic
CAediting_948281chr12_131938283_+intronic
CAediting_948282chr12_131938284_+intronic
CAediting_948283chr12_131938285_+intronic
CAediting_948284chr12_131938287_+intronic
CAediting_948285chr12_131938292_+intronic
CAediting_948286chr12_131938298_+intronic
CAediting_948287chr12_131938302_+intronic
CAediting_948288chr12_131938306_+intronic
CAediting_948289chr12_131938324_+intronic
CAediting_948290chr12_131938334_+intronic
CAediting_948291chr12_131938341_+intronic
CAediting_948292chr12_131938354_+intronic
CAediting_948293chr12_131938364_+intronic
CAediting_948294chr12_131938365_+intronic
CAediting_948295chr12_131938366_+intronic
CAediting_948296chr12_131938378_+intronic
CAediting_948297chr12_131938379_+intronic
CAediting_948298chr12_131938389_+intronic
CAediting_948299chr12_131938390_+intronic
CAediting_948300chr12_131938394_+intronic
CAediting_948301chr12_131938395_+intronic
CAediting_948302chr12_131938411_+intronic
CAediting_948303chr12_131938435_+intronic
CAediting_948304chr12_131938765_+intronic
CAediting_948305chr12_131938783_+intronic
CAediting_948306chr12_131938791_+intronic
CAediting_948307chr12_131938801_+intronic
CAediting_948308chr12_131938826_+intronic
CAediting_948309chr12_131938839_+intronic
CAediting_948310chr12_131938848_+intronic
CAediting_948311chr12_131938851_+intronic
CAediting_948312chr12_131938887_+intronic
CAediting_948313chr12_131938888_+intronic
CAediting_948314chr12_131938906_+intronic
CAediting_948315chr12_131938928_+intronic
CAediting_948316chr12_131938943_+intronic
CAediting_948317chr12_131938952_+intronic
CAediting_948318chr12_131938957_+intronic
CAediting_948319chr12_131938980_+intronic
CAediting_948320chr12_131939002_+intronic
CAediting_948321chr12_131939015_+intronic
CAediting_948322chr12_131939031_+intronic
CAediting_948323chr12_131939694_+intronic
CAediting_948324chr12_131939729_+intronic
CAediting_948325chr12_131939754_+intronic
CAediting_948326chr12_131939765_+intronic
CAediting_948327chr12_131939777_+intronic
CAediting_948328chr12_131939778_+intronic
CAediting_948329chr12_131939787_+intronic
CAediting_948330chr12_131940056_+intronic
CAediting_948331chr12_131940097_+intronic
CAediting_948332chr12_131940102_+intronic
CAediting_948333chr12_131940107_+intronic
CAediting_948334chr12_131940119_+intronic
CAediting_948335chr12_131940132_+intronic
CAediting_948336chr12_131940133_+intronic
CAediting_948337chr12_131940168_+intronic
CAediting_948338chr12_131940202_+intronic
CAediting_948339chr12_131940214_+intronic
CAediting_948340chr12_131940231_+intronic
CAediting_948341chr12_131940240_+intronic
CAediting_948342chr12_131940283_+intronic
CAediting_948343chr12_131940292_+intronic
CAediting_948344chr12_131940293_+intronic
CAediting_948345chr12_131940305_+intronic
CAediting_948346chr12_131940311_+intronic
CAediting_948347chr12_131940581_+intronic
CAediting_948348chr12_131940596_+intronic
CAediting_948349chr12_131940621_+intronic
CAediting_948350chr12_131940642_+intronic
CAediting_948351chr12_131940652_+intronic
CAediting_948352chr12_131940664_+intronic
CAediting_948353chr12_131940681_+intronic
CAediting_948354chr12_131940682_+intronic
CAediting_948355chr12_131940694_+intronic
CAediting_948356chr12_131940699_+intronic
CAediting_948357chr12_131940711_+intronic
CAediting_948358chr12_131940734_+intronic
CAediting_948359chr12_131940747_+intronic
CAediting_948360chr12_131940748_+intronic
CAediting_948361chr12_131940756_+intronic
CAediting_948362chr12_131940762_+intronic
CAediting_948363chr12_131940765_+intronic
CAediting_948364chr12_131940787_+intronic
CAediting_948365chr12_131940793_+intronic
CAediting_948366chr12_131940795_+intronic
CAediting_948367chr12_131940807_+intronic
CAediting_948368chr12_131940816_+intronic
CAediting_948369chr12_131940834_+intronic
CAediting_948370chr12_131940835_+intronic
CAediting_948371chr12_131940847_+intronic
CAediting_948372chr12_131944001_+UTR3
CAediting_948373chr12_131944022_+UTR3
CAediting_948374chr12_131944046_+UTR3
CAediting_948375chr12_131944048_+UTR3
CAediting_948376chr12_131944051_+UTR3
CAediting_948377chr12_131944117_+UTR3
CAediting_948378chr12_131944122_+UTR3
CAediting_948379chr12_131944130_+UTR3
CAediting_948380chr12_131944236_+UTR3
CAediting_948381chr12_131944259_+UTR3
CAediting_948382chr12_131944334_+UTR3
CAediting_948383chr12_131944338_+UTR3
CAediting_948384chr12_131944349_+UTR3
CAediting_948385chr12_131944361_+UTR3
CAediting_948386chr12_131944393_+UTR3
CAediting_948387chr12_131944394_+UTR3
CAediting_948388chr12_131944403_+UTR3
CAediting_948389chr12_131944463_+UTR3
CAediting_948390chr12_131945552_+UTR3
CAediting_948391chr12_131945561_+UTR3
CAediting_948392chr12_131945571_+UTR3
CAediting_948393chr12_131945596_+UTR3
CAediting_948394chr12_131945597_+UTR3
CAediting_948395chr12_131945621_+UTR3
CAediting_948396chr12_131945631_+UTR3
CAediting_948397chr12_131945636_+UTR3
CAediting_948398chr12_131945652_+UTR3
CAediting_948399chr12_131945680_+UTR3
CAediting_948400chr12_131945684_+UTR3
CAediting_948401chr12_131945686_+UTR3
CAediting_948402chr12_131945694_+UTR3
CAediting_948403chr12_131945697_+UTR3
CAediting_948404chr12_131945717_+UTR3
CAediting_948405chr12_131945731_+UTR3
CAediting_948406chr12_131945740_+UTR3
CAediting_948407chr12_131945757_+UTR3
CAediting_948408chr12_131945758_+UTR3
CAediting_948409chr12_131945759_+UTR3
CAediting_948410chr12_131945780_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_948129chr12_131930757_+SINEAluAluJo
CAediting_948130chr12_131931381_+SINEAluAluSx1
CAediting_948131chr12_131931728_+SINEAluAluSx1
CAediting_948132chr12_131931731_+SINEAluAluSx1
CAediting_948133chr12_131931791_+SINEAluAluSx1
CAediting_948134chr12_131931792_+SINEAluAluSx1
CAediting_948135chr12_131931807_+SINEAluAluSx1
CAediting_948136chr12_131932042_+SINEAluAluJr
CAediting_948137chr12_131932049_+SINEAluAluJr
CAediting_948138chr12_131932055_+SINEAluAluJr
CAediting_948139chr12_131932056_+SINEAluAluJr
CAediting_948140chr12_131932117_+SINEAluAluJr
CAediting_948141chr12_131932720_+SINEAluAluJo
CAediting_948142chr12_131932726_+SINEAluAluJo
CAediting_948143chr12_131932729_+SINEAluAluJo
CAediting_948144chr12_131932758_+SINEAluAluJo
CAediting_948145chr12_131932777_+SINEAluAluJo
CAediting_948146chr12_131932788_+SINEAluAluJo
CAediting_948147chr12_131932802_+SINEAluAluJo
CAediting_948148chr12_131932803_+SINEAluAluJo
CAediting_948149chr12_131932820_+SINEAluAluJo
CAediting_948150chr12_131933166_+SINEAluAluJo
CAediting_948151chr12_131933251_+SINEAluFLAM_C
CAediting_948152chr12_131933315_+SINEAluFLAM_C
CAediting_948153chr12_131935553_+SINEAluAluSp
CAediting_948154chr12_131935663_+SINEAluAluSp
CAediting_948155chr12_131935673_+SINEAluAluSp
CAediting_948156chr12_131935716_+SINEAluAluSp
CAediting_948157chr12_131935807_+SINEAluAluSp
CAediting_948158chr12_131935955_+SINEAluAluSx1
CAediting_948159chr12_131935956_+SINEAluAluSx1
CAediting_948160chr12_131935977_+SINEAluAluSx1
CAediting_948161chr12_131935978_+SINEAluAluSx1
CAediting_948162chr12_131936001_+SINEAluAluSx1
CAediting_948163chr12_131936005_+SINEAluAluSx1
CAediting_948164chr12_131936009_+SINEAluAluSx1
CAediting_948165chr12_131936010_+SINEAluAluSx1
CAediting_948166chr12_131936015_+SINEAluAluSx1
CAediting_948167chr12_131936025_+SINEAluAluSx1
CAediting_948168chr12_131936035_+SINEAluAluSx1
CAediting_948169chr12_131936046_+SINEAluAluSx1
CAediting_948170chr12_131936050_+SINEAluAluSx1
CAediting_948171chr12_131936051_+SINEAluAluSx1
CAediting_948172chr12_131936055_+SINEAluAluSx1
CAediting_948173chr12_131936058_+SINEAluAluSx1
CAediting_948174chr12_131936064_+SINEAluAluSx1
CAediting_948175chr12_131936090_+SINEAluAluSx1
CAediting_948176chr12_131936091_+SINEAluAluSx1
CAediting_948177chr12_131936096_+SINEAluAluSx1
CAediting_948178chr12_131936100_+SINEAluAluSx1
CAediting_948179chr12_131936104_+SINEAluAluSx1
CAediting_948180chr12_131936107_+SINEAluAluSx1
CAediting_948181chr12_131936117_+SINEAluAluSx1
CAediting_948182chr12_131936122_+SINEAluAluSx1
CAediting_948183chr12_131936123_+SINEAluAluSx1
CAediting_948184chr12_131936132_+SINEAluAluSx1
CAediting_948185chr12_131936152_+SINEAluAluSx1
CAediting_948186chr12_131936155_+SINEAluAluSx1
CAediting_948187chr12_131936156_+SINEAluAluSx1
CAediting_948188chr12_131936343_+SINEAluAluSq2
CAediting_948189chr12_131936361_+SINEAluAluSq2
CAediting_948190chr12_131936362_+SINEAluAluSq2
CAediting_948191chr12_131936367_+SINEAluAluSq2
CAediting_948192chr12_131936401_+SINEAluAluSq2
CAediting_948193chr12_131936402_+SINEAluAluSq2
CAediting_948194chr12_131936469_+SINEAluAluSq2
CAediting_948195chr12_131936489_+SINEAluAluSq2
CAediting_948196chr12_131936504_+SINEAluAluSq2
CAediting_948197chr12_131936584_+SINEAluAluSq2
CAediting_948198chr12_131936625_+SINEAluAluSz6
CAediting_948199chr12_131936633_+SINEAluAluSz6
CAediting_948200chr12_131936634_+SINEAluAluSz6
CAediting_948201chr12_131936640_+SINEAluAluSz6
CAediting_948202chr12_131936655_+SINEAluAluSz6
CAediting_948203chr12_131936657_+SINEAluAluSz6
CAediting_948204chr12_131936674_+SINEAluAluSz6
CAediting_948205chr12_131936679_+SINEAluAluSz6
CAediting_948206chr12_131936682_+SINEAluAluSz6
CAediting_948207chr12_131936688_+SINEAluAluSz6
CAediting_948208chr12_131936690_+SINEAluAluSz6
CAediting_948209chr12_131936693_+SINEAluAluSz6
CAediting_948210chr12_131936702_+SINEAluAluSz6
CAediting_948211chr12_131936710_+SINEAluAluSz6
CAediting_948212chr12_131936711_+SINEAluAluSz6
CAediting_948213chr12_131936712_+SINEAluAluSz6
CAediting_948214chr12_131936713_+SINEAluAluSz6
CAediting_948215chr12_131936724_+SINEAluAluSz6
CAediting_948216chr12_131936727_+SINEAluAluSz6
CAediting_948217chr12_131936728_+SINEAluAluSz6
CAediting_948218chr12_131936729_+SINEAluAluSz6
CAediting_948219chr12_131936733_+SINEAluAluSz6
CAediting_948220chr12_131936736_+SINEAluAluSz6
CAediting_948221chr12_131936739_+SINEAluAluSz6
CAediting_948222chr12_131936742_+SINEAluAluSz6
CAediting_948223chr12_131936746_+SINEAluAluSz6
CAediting_948224chr12_131936762_+SINEAluAluSz6
CAediting_948225chr12_131936768_+SINEAluAluSz6
CAediting_948226chr12_131936769_+SINEAluAluSz6
CAediting_948227chr12_131936778_+SINEAluAluSz6
CAediting_948228chr12_131936785_+SINEAluAluSz6
CAediting_948229chr12_131936795_+SINEAluAluSz6
CAediting_948230chr12_131936801_+SINEAluAluSz6
CAediting_948231chr12_131936814_+SINEAluAluSz6
CAediting_948232chr12_131936817_+SINEAluAluSz6
CAediting_948233chr12_131937430_+SINEAluAluSq2
CAediting_948234chr12_131937431_+SINEAluAluSq2
CAediting_948235chr12_131937436_+SINEAluAluSq2
CAediting_948236chr12_131937445_+SINEAluAluSq2
CAediting_948237chr12_131937474_+SINEAluAluSq2
CAediting_948238chr12_131937475_+SINEAluAluSq2
CAediting_948239chr12_131937492_+SINEAluAluSq2
CAediting_948240chr12_131937536_+SINEAluAluSq2
CAediting_948241chr12_131937540_+SINEAluAluSq2
CAediting_948242chr12_131937541_+SINEAluAluSq2
CAediting_948243chr12_131937550_+SINEAluAluSq2
CAediting_948244chr12_131937556_+SINEAluAluSq2
CAediting_948245chr12_131937559_+SINEAluAluSq2
CAediting_948246chr12_131937560_+SINEAluAluSq2
CAediting_948247chr12_131937562_+SINEAluAluSq2
CAediting_948248chr12_131937563_+SINEAluAluSq2
CAediting_948249chr12_131937573_+SINEAluAluSq2
CAediting_948250chr12_131937585_+SINEAluAluSq2
CAediting_948251chr12_131937590_+SINEAluAluSq2
CAediting_948252chr12_131937597_+SINEAluAluSq2
CAediting_948253chr12_131937598_+SINEAluAluSq2
CAediting_948254chr12_131937610_+SINEAluAluSq2
CAediting_948255chr12_131937637_+SINEAluAluSq2
CAediting_948256chr12_131937638_+SINEAluAluSq2
CAediting_948257chr12_131937660_+SINEAluAluSq2
CAediting_948258chr12_131937731_+SINEAluFLAM_C
CAediting_948259chr12_131937735_+SINEAluFLAM_C
CAediting_948260chr12_131937780_+SINEAluFLAM_C
CAediting_948261chr12_131937781_+SINEAluFLAM_C
CAediting_948262chr12_131937784_+SINEAluFLAM_C
CAediting_948263chr12_131938170_+SINEAluAluJr
CAediting_948264chr12_131938182_+SINEAluAluJr
CAediting_948265chr12_131938188_+SINEAluAluJr
CAediting_948266chr12_131938189_+SINEAluAluJr
CAediting_948267chr12_131938194_+SINEAluAluJr
CAediting_948268chr12_131938197_+SINEAluAluJr
CAediting_948269chr12_131938218_+SINEAluAluJr
CAediting_948270chr12_131938224_+SINEAluAluJr
CAediting_948271chr12_131938229_+SINEAluAluJr
CAediting_948272chr12_131938234_+SINEAluAluJr
CAediting_948273chr12_131938237_+SINEAluAluJr
CAediting_948274chr12_131938257_+SINEAluAluJr
CAediting_948275chr12_131938258_+SINEAluAluJr
CAediting_948276chr12_131938262_+SINEAluAluJr
CAediting_948277chr12_131938265_+SINEAluAluJr
CAediting_948278chr12_131938266_+SINEAluAluJr
CAediting_948279chr12_131938279_+SINEAluAluJr
CAediting_948280chr12_131938281_+SINEAluAluJr
CAediting_948281chr12_131938283_+SINEAluAluJr
CAediting_948282chr12_131938284_+SINEAluAluJr
CAediting_948283chr12_131938285_+SINEAluAluJr
CAediting_948284chr12_131938287_+SINEAluAluJr
CAediting_948285chr12_131938292_+SINEAluAluJr
CAediting_948286chr12_131938298_+SINEAluAluJr
CAediting_948287chr12_131938302_+SINEAluAluJr
CAediting_948288chr12_131938306_+SINEAluAluJr
CAediting_948289chr12_131938324_+SINEAluAluJr
CAediting_948290chr12_131938334_+SINEAluAluJr
CAediting_948291chr12_131938341_+SINEAluAluJr
CAediting_948292chr12_131938354_+SINEAluAluJr
CAediting_948293chr12_131938364_+SINEAluAluJr
CAediting_948294chr12_131938365_+SINEAluAluJr
CAediting_948295chr12_131938366_+SINEAluAluJr
CAediting_948296chr12_131938378_+SINEAluAluJr
CAediting_948297chr12_131938379_+SINEAluAluJr
CAediting_948298chr12_131938389_+SINEAluAluJr
CAediting_948299chr12_131938390_+SINEAluAluJr
CAediting_948300chr12_131938394_+SINEAluAluJr
CAediting_948301chr12_131938395_+SINEAluAluJr
CAediting_948302chr12_131938411_+SINEAluAluJr
CAediting_948303chr12_131938435_+SINEAluAluJr
CAediting_948304chr12_131938765_+SINEAluAluY
CAediting_948305chr12_131938783_+SINEAluAluY
CAediting_948306chr12_131938791_+SINEAluAluY
CAediting_948307chr12_131938801_+SINEAluAluY
CAediting_948308chr12_131938826_+SINEAluAluY
CAediting_948309chr12_131938839_+SINEAluAluY
CAediting_948310chr12_131938848_+SINEAluAluY
CAediting_948311chr12_131938851_+SINEAluAluY
CAediting_948312chr12_131938887_+SINEAluAluY
CAediting_948313chr12_131938888_+SINEAluAluY
CAediting_948314chr12_131938906_+SINEAluAluY
CAediting_948315chr12_131938928_+SINEAluAluY
CAediting_948316chr12_131938943_+SINEAluAluY
CAediting_948317chr12_131938952_+SINEAluAluY
CAediting_948318chr12_131938957_+SINEAluAluY
CAediting_948319chr12_131938980_+SINEAluAluY
CAediting_948320chr12_131939002_+SINEAluAluY
CAediting_948321chr12_131939015_+SINEAluAluY
CAediting_948322chr12_131939031_+SINEAluAluY
CAediting_948323chr12_131939694_+SINEAluAluJb
CAediting_948324chr12_131939729_+SINEAluAluJb
CAediting_948325chr12_131939754_+SINEAluAluJb
CAediting_948326chr12_131939765_+SINEAluAluJb
CAediting_948327chr12_131939777_+SINEAluAluJb
CAediting_948328chr12_131939778_+SINEAluAluJb
CAediting_948329chr12_131939787_+SINEAluAluJb
CAediting_948330chr12_131940056_+SINEAluAluJb
CAediting_948331chr12_131940097_+SINEAluAluJb
CAediting_948332chr12_131940102_+SINEAluAluJb
CAediting_948333chr12_131940107_+SINEAluAluJb
CAediting_948334chr12_131940119_+SINEAluAluJb
CAediting_948335chr12_131940132_+SINEAluAluJb
CAediting_948336chr12_131940133_+SINEAluAluJb
CAediting_948337chr12_131940168_+SINEAluAluJb
CAediting_948338chr12_131940202_+SINEAluAluJb
CAediting_948339chr12_131940214_+SINEAluAluJb
CAediting_948340chr12_131940231_+SINEAluAluJb
CAediting_948341chr12_131940240_+SINEAluAluJb
CAediting_948342chr12_131940283_+SINEAluAluJb
CAediting_948343chr12_131940292_+SINEAluAluJb
CAediting_948344chr12_131940293_+SINEAluAluJb
CAediting_948345chr12_131940305_+SINEAluAluJb
CAediting_948346chr12_131940311_+SINEAluAluJb
CAediting_948347chr12_131940581_+SINEAluAluSx
CAediting_948348chr12_131940596_+SINEAluAluSx
CAediting_948349chr12_131940621_+SINEAluAluSx
CAediting_948350chr12_131940642_+SINEAluAluSx
CAediting_948351chr12_131940652_+SINEAluAluSx
CAediting_948352chr12_131940664_+SINEAluAluSx
CAediting_948353chr12_131940681_+SINEAluAluSx
CAediting_948354chr12_131940682_+SINEAluAluSx
CAediting_948355chr12_131940694_+SINEAluAluSx
CAediting_948356chr12_131940699_+SINEAluAluSx
CAediting_948357chr12_131940711_+SINEAluAluSx
CAediting_948358chr12_131940734_+SINEAluAluSx
CAediting_948359chr12_131940747_+SINEAluAluSx
CAediting_948360chr12_131940748_+SINEAluAluSx
CAediting_948361chr12_131940756_+SINEAluAluSx
CAediting_948362chr12_131940762_+SINEAluAluSx
CAediting_948363chr12_131940765_+SINEAluAluSx
CAediting_948364chr12_131940787_+SINEAluAluSx
CAediting_948365chr12_131940793_+SINEAluAluSx
CAediting_948366chr12_131940795_+SINEAluAluSx
CAediting_948367chr12_131940807_+SINEAluAluSx
CAediting_948368chr12_131940816_+SINEAluAluSx
CAediting_948369chr12_131940834_+SINEAluAluSx
CAediting_948370chr12_131940835_+SINEAluAluSx
CAediting_948371chr12_131940847_+SINEAluAluSx
CAediting_948372chr12_131944001_+SINEAluAluJb
CAediting_948373chr12_131944022_+SINEAluAluJb
CAediting_948374chr12_131944046_+SINEAluAluJb
CAediting_948375chr12_131944048_+SINEAluAluJb
CAediting_948376chr12_131944051_+SINEAluAluJb
CAediting_948377chr12_131944117_+SINEAluAluJb
CAediting_948378chr12_131944122_+SINEAluAluJb
CAediting_948379chr12_131944130_+SINEAluAluJb
CAediting_948380chr12_131944236_+SINEAluAluSx1
CAediting_948381chr12_131944259_+SINEAluAluSx1
CAediting_948382chr12_131944334_+SINEAluAluSx1
CAediting_948383chr12_131944338_+SINEAluAluSx1
CAediting_948384chr12_131944349_+SINEAluAluSx1
CAediting_948385chr12_131944361_+SINEAluAluSx1
CAediting_948386chr12_131944393_+SINEAluAluSx1
CAediting_948387chr12_131944394_+SINEAluAluSx1
CAediting_948388chr12_131944403_+SINEAluAluSx1
CAediting_948389chr12_131944463_+SINEAluAluSx1
CAediting_948390chr12_131945552_+SINEAluAluSx1
CAediting_948391chr12_131945561_+SINEAluAluSx1
CAediting_948392chr12_131945571_+SINEAluAluSx1
CAediting_948393chr12_131945596_+SINEAluAluSx1
CAediting_948394chr12_131945597_+SINEAluAluSx1
CAediting_948395chr12_131945621_+SINEAluAluSx1
CAediting_948396chr12_131945631_+SINEAluAluSx1
CAediting_948397chr12_131945636_+SINEAluAluSx1
CAediting_948398chr12_131945652_+SINEAluAluSx1
CAediting_948399chr12_131945680_+SINEAluAluSx1
CAediting_948400chr12_131945684_+SINEAluAluSx1
CAediting_948401chr12_131945686_+SINEAluAluSx1
CAediting_948402chr12_131945694_+SINEAluAluSx1
CAediting_948403chr12_131945697_+SINEAluAluSx1
CAediting_948404chr12_131945717_+SINEAluAluSx1
CAediting_948405chr12_131945731_+SINEAluAluSx1
CAediting_948406chr12_131945740_+SINEAluAluSx1
CAediting_948407chr12_131945757_+SINEAluAluSx1
CAediting_948408chr12_131945758_+SINEAluAluSx1
CAediting_948409chr12_131945759_+SINEAluAluSx1
CAediting_948410chr12_131945780_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for PUS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_948141chr12_131932720_+131932701:1319327233SS0+1iCTCTTTTCTTTCCTTTTTTAGAG-3.95CTCTTTTCTTTCCTTTTTTGGAG4.8
IRCAediting_948141chr12_131932720_+131932701:1319327233SS0+1iCTCTTTTCTTTCCTTTTTTAGAG-3.95CTCTTTTCTTTCCTTTTTTGGAG4.8
MEX_1CAediting_948141chr12_131932720_+131932701:1319327233SS0+1iCTCTTTTCTTTCCTTTTTTAGAG-3.95CTCTTTTCTTTCCTTTTTTGGAG4.8

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000177192.12.PUS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000177192.12.PUS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PUS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PUS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PUS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_948394chr12_131945597_+ENSG00000177192.12ENST00000376649hsa-miR-60781319455931319456008mer-1a131945582131945600153.00-23.01
CAediting_948394chr12_131945597_+ENSG00000177192.12ENST00000376649hsa-miR-6751-3p1319455901319455967mer-m8131945577131945597141.00-14.90
CAediting_948396chr12_131945631_+ENSG00000177192.12ENST00000376649hsa-miR-79771319456261319456327mer-m8131945616131945633142.00-14.73
CAediting_948397chr12_131945636_+ENSG00000177192.12ENST00000376649hsa-miR-4793-3p1319456321319456387mer-m8131945616131945639164.00-28.97
CAediting_948397chr12_131945636_+ENSG00000177192.12ENST00000376649hsa-miR-77031319456311319456377mer-m8131945616131945638162.00-21.82
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-340-3p1319456801319456867mer-m8131945666131945687145.00-16.90
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-6827-3p1319456801319456867mer-m8131945667131945687149.00-16.65
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-31161319440421319440487mer-m8131944027131944049151.00-19.38
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-31161319440421319440487mer-m8131944027131944049151.00-19.38
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-31761319440451319440517mer-m8131944034131944052168.00-30.47
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-3922-3p1319440451319440517mer-m8131944027131944052157.00-22.26
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-42541319440421319440476mer131944025131944048146.00-22.96
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-6611319440431319440486mer131944025131944049141.00-23.75
CAediting_948377chr12_131944117_+ENSG00000177192.12ENST00000376649hsa-miR-140-3p1319441121319441187mer-m8131944099131944119156.00-25.12
CAediting_948378chr12_131944122_+ENSG00000177192.12ENST00000376649hsa-miR-6716-3p1319441161319441227mer-m8131944099131944123143.00-15.77
CAediting_948381chr12_131944259_+ENSG00000177192.12ENST00000376649hsa-miR-80521319442571319442637mer-1a131944245131944263148.00-29.06
CAediting_948383chr12_131944338_+ENSG00000177192.12ENST00000376649hsa-miR-45081319443361319443427mer-m8131944327131944343140.00-19.22
CAediting_948383chr12_131944338_+ENSG00000177192.12ENST00000376649hsa-miR-6815-3p1319443331319443397mer-m8131944319131944340152.00-19.53
CAediting_948383chr12_131944338_+ENSG00000177192.12ENST00000376649hsa-miR-942-5p1319443321319443376mer131944317131944338152.00-17.40
CAediting_948384chr12_131944349_+ENSG00000177192.12ENST00000376649hsa-miR-374b-3p1319443461319443538mer-1a131944331131944353142.00-10.45
CAediting_948385chr12_131944361_+ENSG00000177192.12ENST00000376649hsa-miR-4742-3p1319443541319443618mer-1a131944339131944361142.00-9.18
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-513a-5p1319443871319443937mer-m8131944377131944394140.00-15.07
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-513a-5p1319443871319443937mer-m8131944377131944394140.00-15.07
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-6381319443921319443987mer-1a131944374131944398151.00-29.62
CAediting_948388chr12_131944403_+ENSG00000177192.12ENST00000376649hsa-miR-1207-3p1319443961319444027mer-m8131944386131944403140.00-12.56
CAediting_948388chr12_131944403_+ENSG00000177192.12ENST00000376649hsa-miR-6461319443981319444047mer-m8131944387131944405145.00-16.24
CAediting_948389chr12_131944463_+ENSG00000177192.12ENST00000376649hsa-miR-4638-5p1319444581319444658mer-1a131944446131944465146.00-18.74
CAediting_948398chr12_131945652_+ENSG00000177192.12ENST00000376649hsa-miR-10394-3p1319456501319456567mer-m8131945630131945657151.00-34.07
CAediting_948398chr12_131945652_+ENSG00000177192.12ENST00000376649hsa-miR-31781319456501319456567mer-m8131945641131945657152.00-26.39
CAediting_948398chr12_131945652_+ENSG00000177192.12ENST00000376649hsa-miR-44791319456481319456547mer-m8131945634131945655148.00-21.81
CAediting_948398chr12_131945652_+ENSG00000177192.12ENST00000376649hsa-miR-6820-5p1319456461319456527mer-m8131945635131945653142.00-23.58
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-6771-5p1319457511319457588mer-1a131945737131945758159.00-28.55
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-518e-3p1319439971319440037mer-m8131943983131944004144.00-13.20
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-6747-3p1319456811319456877mer-m8131945668131945688141.00-18.85
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-6752-3p1319456821319456887mer-m8131945669131945689145.00-18.64
CAediting_948403chr12_131945697_+ENSG00000177192.12ENST00000376649hsa-miR-433-5p1319456911319456977mer-m8131945675131945698167.00-27.94
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-127-3p1319457341319457396mer131945720131945740146.00-30.20
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-47671319457381319457447mer-m8131945720131945745148.00-23.76
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-3261319457531319457597mer-m8131945741131945760140.00-14.14
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-330-5p1319457531319457597mer-m8131945739131945760140.00-22.24
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-43141319457521319457587mer-m8131945742131945759140.00-18.79
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-514a-5p1319457541319457607mer-m8131945741131945761154.00-19.80
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-514a-5p1319457541319457607mer-m8131945741131945761154.00-19.80
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-514a-5p1319457541319457607mer-m8131945741131945761154.00-19.80
CAediting_948409chr12_131945759_+ENSG00000177192.12ENST00000376649hsa-miR-3189-3p1319457531319457597mer-m8131945737131945760149.00-20.43
CAediting_948409chr12_131945759_+ENSG00000177192.12ENST00000376649hsa-miR-6813-3p1319457541319457607mer-m8131945741131945761140.00-15.63
CAediting_948410chr12_131945780_+ENSG00000177192.12ENST00000376649hsa-miR-6621319457751319457806mer131945759131945781153.00-32.51
CAediting_948410chr12_131945780_+ENSG00000177192.12ENST00000376649hsa-miR-663b1319457781319457847mer-m8131945762131945785149.00-31.22

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_948381chr12_131944259_+ENSG00000177192.12ENST00000376649hsa-miR-10399-5p1319442531319442597mer-m8131944239131944260144-10.26
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-10399-5p1319443881319443947mer-m8131944376131944395141-11.84
CAediting_948387chr12_131944394_+ENSG00000177192.12ENST00000376649hsa-miR-10399-5p1319443881319443947mer-m8131944376131944395141-11.84
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-10a-5p1319456831319456897mer-m8131945667131945690148-18.95
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-10b-5p1319456831319456897mer-m8131945667131945690148-19.97
CAediting_948379chr12_131944130_+ENSG00000177192.12ENST00000376649hsa-miR-12001319441261319441327mer-m8131944114131944133155-26.08
CAediting_948378chr12_131944122_+ENSG00000177192.12ENST00000376649hsa-miR-121131319441161319441227mer-m8131944104131944123148-14.06
CAediting_948383chr12_131944338_+ENSG00000177192.12ENST00000376649hsa-miR-193b-5p1319443351319443417mer-m8131944321131944342141-19.74
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-302a-3p1319439971319440037mer-m8131943983131944004143-12.43
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-302b-3p1319439971319440037mer-m8131943982131944004141-10.95
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-302c-3p1319439971319440037mer-m8131943984131944004145-13.37
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-302d-3p1319439971319440037mer-m8131943978131944004144-15.78
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-302e1319439971319440037mer-m8131943988131944004141-10.03
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-30b-3p1319457501319457578mer-1a131945736131945757147-15.96
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-31651319457351319457417mer-m8131945723131945742152-16.37
CAediting_948392chr12_131945571_+ENSG00000177192.12ENST00000376649hsa-miR-31741319455671319455726mer131945551131945573142-23.77
CAediting_948380chr12_131944236_+ENSG00000177192.12ENST00000376649hsa-miR-3190-5p1319442301319442367mer-m8131944218131944237147-18.85
CAediting_948390chr12_131945552_+ENSG00000177192.12ENST00000376649hsa-miR-324-3p1319455491319455557mer-m8131945532131945556154-27.72
CAediting_948405chr12_131945731_+ENSG00000177192.12ENST00000376649hsa-miR-3622a-3p1319457281319457358mer-1a131945714131945735147-14.84
CAediting_948405chr12_131945731_+ENSG00000177192.12ENST00000376649hsa-miR-3622b-3p1319457281319457358mer-1a131945715131945735155-21.11
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-3663-5p1319440451319440517mer-m8131944033131944052148-21.97
CAediting_948376chr12_131944051_+ENSG00000177192.12ENST00000376649hsa-miR-3663-5p1319440451319440517mer-m8131944033131944052148-21.97
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-3689a-3p1319457501319457578mer-1a131945736131945757141-19.53
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-3689b-3p1319457501319457578mer-1a131945736131945757141-19.58
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-3689c1319457501319457578mer-1a131945736131945757141-19.58
CAediting_948390chr12_131945552_+ENSG00000177192.12ENST00000376649hsa-miR-42521319455501319455567mer-m8131945537131945557144-18.43
CAediting_948410chr12_131945780_+ENSG00000177192.12ENST00000376649hsa-miR-42841319457761319457838mer-1a131945766131945783143-15.61
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-44211319456811319456877mer-m8131945667131945688154-17.19
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-44211319456811319456877mer-m8131945667131945688154-17.19
CAediting_948380chr12_131944236_+ENSG00000177192.12ENST00000376649hsa-miR-44351319442291319442357mer-m8131944215131944236140-16.23
CAediting_948380chr12_131944236_+ENSG00000177192.12ENST00000376649hsa-miR-44351319442291319442357mer-m8131944215131944236140-16.23
CAediting_948395chr12_131945621_+ENSG00000177192.12ENST00000376649hsa-miR-44431319456141319456207mer-m8131945606131945621147-19.36
CAediting_948378chr12_131944122_+ENSG00000177192.12ENST00000376649hsa-miR-45391319441161319441227mer-m8131944100131944123150-25.14
CAediting_948399chr12_131945680_+ENSG00000177192.12ENST00000376649hsa-miR-4684-5p1319456771319456837mer-m8131945662131945684155-13.2
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-4684-5p1319456771319456837mer-m8131945662131945684155-13.2
CAediting_948381chr12_131944259_+ENSG00000177192.12ENST00000376649hsa-miR-5089-5p1319442571319442648mer-1a131944245131944264146-13.81
CAediting_948387chr12_131944394_+ENSG00000177192.12ENST00000376649hsa-miR-5089-5p1319443921319443987mer-m8131944379131944399144-13.27
CAediting_948395chr12_131945621_+ENSG00000177192.12ENST00000376649hsa-miR-518c-5p1319456171319456237mer-m8131945600131945624151-20.92
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-520a-3p1319439971319440037mer-m8131943982131944004143-12.73
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-520b-3p1319439971319440037mer-m8131943985131944004141-15.07
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-520c-3p1319439971319440037mer-m8131943984131944004146-15.07
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-520d-3p1319439971319440037mer-m8131943983131944004140-11.67
CAediting_948372chr12_131944001_+ENSG00000177192.12ENST00000376649hsa-miR-520e-3p1319439971319440037mer-m8131943984131944004140-11.87
CAediting_948382chr12_131944334_+ENSG00000177192.12ENST00000376649hsa-miR-5581-3p1319443271319443337mer-m8131944313131944334140-13.57
CAediting_948388chr12_131944403_+ENSG00000177192.12ENST00000376649hsa-miR-5621319443991319444057mer-m8131944387131944406150-12.74
CAediting_948388chr12_131944403_+ENSG00000177192.12ENST00000376649hsa-miR-56971319444001319444067mer-m8131944385131944407149-18.32
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-5699-3p1319456811319456877mer-m8131945667131945688149-17.85
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-5699-3p1319456811319456877mer-m8131945667131945688149-17.85
CAediting_948375chr12_131944048_+ENSG00000177192.12ENST00000376649hsa-miR-61311319440461319440527mer-m8131944038131944053144-21.2
CAediting_948376chr12_131944051_+ENSG00000177192.12ENST00000376649hsa-miR-61311319440461319440527mer-m8131944038131944053144-21.2
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-6504-3p1319443881319443947mer-m8131944374131944395148-12.93
CAediting_948387chr12_131944394_+ENSG00000177192.12ENST00000376649hsa-miR-6504-3p1319443881319443947mer-m8131944374131944395148-12.93
CAediting_948395chr12_131945621_+ENSG00000177192.12ENST00000376649hsa-miR-6515-5p1319456151319456206mer131945601131945621140-24.84
CAediting_948379chr12_131944130_+ENSG00000177192.12ENST00000376649hsa-miR-660-3p1319441281319441347mer-m8131944115131944135155-23.5
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-67451319457361319457427mer-m8131945723131945743140-20.78
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-6756-5p1319457371319457426mer131945719131945743140-25.26
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-6766-5p1319457371319457426mer131945718131945743142-25.41
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-6779-5p1319457501319457578mer-1a131945734131945757147-25.77
CAediting_948396chr12_131945631_+ENSG00000177192.12ENST00000376649hsa-miR-6787-3p1319456251319456328mer-1a131945611131945632151-18.79
CAediting_948400chr12_131945684_+ENSG00000177192.12ENST00000376649hsa-miR-6818-3p1319456791319456857mer-m8131945665131945686140-14.76
CAediting_948401chr12_131945686_+ENSG00000177192.12ENST00000376649hsa-miR-6818-3p1319456791319456857mer-m8131945665131945686140-14.76
CAediting_948384chr12_131944349_+ENSG00000177192.12ENST00000376649hsa-miR-6832-5p1319443431319443497mer-m8131944328131944350142-16.66
CAediting_948386chr12_131944393_+ENSG00000177192.12ENST00000376649hsa-miR-7151-3p1319443861319443938mer-1a131944373131944393140-13.39
CAediting_948377chr12_131944117_+ENSG00000177192.12ENST00000376649hsa-miR-7158-3p1319441151319441217mer-m8131944102131944122155-19.37
CAediting_948378chr12_131944122_+ENSG00000177192.12ENST00000376649hsa-miR-7158-3p1319441151319441217mer-m8131944102131944122155-19.37
CAediting_948390chr12_131945552_+ENSG00000177192.12ENST00000376649hsa-miR-77031319455451319455517mer-m8131945530131945552154-19.06
CAediting_948406chr12_131945740_+ENSG00000177192.12ENST00000376649hsa-miR-80561319457351319457406mer131945722131945741142-18.82
CAediting_948407chr12_131945757_+ENSG00000177192.12ENST00000376649hsa-miR-887-5p1319457511319457588mer-1a131945738131945758147-13.95
CAediting_948408chr12_131945758_+ENSG00000177192.12ENST00000376649hsa-miR-887-5p1319457511319457588mer-1a131945738131945758147-13.95

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000443358hsa-miR-4423-3p1319436331319436397mer-m8131943619131943640141-17.15
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000542167hsa-miR-4423-3p1319436331319436397mer-m8131943619131943640141-17.15
CAediting_86358chr1_109598906_+ENSG00000177192.12ENST00000376649hsa-miR-197-5p1319457361319457427mer-m8131945718131945743141-32.31
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000376649hsa-miR-4423-3p1319451701319451767mer-m8131945157131945177140-15.25
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000376649hsa-miR-4423-3p1319452631319452708mer-1a131945250131945270145-18.68
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000376649hsa-miR-4423-3p1319436331319436397mer-m8131943619131943640141-17.15
CAediting_580943chr7_100356700_+ENSG00000177192.12ENST00000376649hsa-miR-6840-3p1319455851319455917mer-m8131945574131945592147-31.33
CAediting_77128chr1_85133844_+ENSG00000177192.12ENST00000535067hsa-miR-4423-3p1319436331319436397mer-m8131943619131943640141-17.15

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_846604chr11_93733708_-ENSG00000177192.12ENST00000376649hsa-miR-1304-3p1319452411319452477mer-m8131945231131945248146-14.75
CAediting_1054808chr15_66496985_-ENSG00000177192.12ENST00000376649hsa-miR-45121319447731319447797mer-m8131944756131944780145-26.49
CAediting_1524209chrX_134546392_-ENSG00000177192.12ENST00000376649hsa-miR-503-5p1319448101319448167mer-m8131944795131944817145-18.49
CAediting_580943chr7_100356700_+ENSG00000177192.12ENST00000376649hsa-miR-6840-3p1319458261319458327mer-m8131945811131945833143-18.94

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PUS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PUS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_948264chr12_131938182_+0.003458793727491130.387598838008189....
STADCAediting_948298chr12_131938389_+0.04750497445446070.24123529776983....

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Relation with cancer stages for PUS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
LUSCpathologic_stageCAediting_948298chr12_131938389_+0.03379772392338790.2978089623198

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Relation with survival for PUS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PUS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PUS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
PUS1C4551958MYOPATHY, LACTIC ACIDOSIS, AND SIDEROBLASTIC ANEMIA 17GENOMICS_ENGLAND;UNIPROT
PUS1C0024623Malignant neoplasm of stomach1CTD_human
PUS1C0038356Stomach Neoplasms1CTD_human
PUS1C0235874Disease Exacerbation1CTD_human
PUS1C1708349Hereditary Diffuse Gastric Cancer1CTD_human
PUS1C1838103MITOCHONDRIAL MYOPATHY AND SIDEROBLASTIC ANEMIA1CTD_human;GENOMICS_ENGLAND;ORPHANET
PUS1C3714756Intellectual Disability1GENOMICS_ENGLAND