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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CEP70 (CAeditome ID:80321)

Gene summary for CEP70

check button Gene summary
Gene informationGene symbol

CEP70

Gene ID

80321

Gene namecentrosomal protein 70
SynonymsBITE
Cytomap

3q22.3

Type of geneprotein-coding
Descriptioncentrosomal protein of 70 kDacentrosomal protein 70kDap10-binding proteintesticular tissue protein Li 36
Modification date20210518
UniProtAcc

Q8NHQ1

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
CEP70

GO:0005813

Centrosomal protein of 70 kDa

21399614


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RNA A-to-I events for CEP70

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000114107.7
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_312188(138495712, -), CAediting_312189(138495769, -), CAediting_312190(138495770, -), CAediting_312191(138498368, -), CAediting_312192(138498405, -), CAediting_312193(138498434, -), CAediting_312194(138498435, -), CAediting_312195(138498443, -), CAediting_312196(138498444, -), CAediting_312197(138498449, -), CAediting_312198(138498483, -), CAediting_312199(138498499, -), CAediting_312200(138498504, -), CAediting_312201(138498505, -), CAediting_312202(138498506, -), CAediting_312203(138498509, -), CAediting_312204(138498511, -), CAediting_312205(138498512, -), CAediting_312206(138498513, -), CAediting_312207(138498514, -), CAediting_312208(138498515, -), CAediting_312209(138498529, -), CAediting_312210(138498598, -), CAediting_312211(138498606, -), CAediting_312212(138498607, -), CAediting_312213(138498615, -), CAediting_312214(138498620, -), CAediting_312215(138498710, -), CAediting_312216(138498785, -), CAediting_312217(138498791, -), CAediting_312218(138498803, -), CAediting_312219(138498850, -), CAediting_312220(138498881, -), CAediting_312221(138498884, -), CAediting_312222(138498902, -), CAediting_312223(138498906, -), CAediting_312224(138498908, -), CAediting_312225(138498911, -), CAediting_312226(138498937, -), CAediting_312227(138498959, -), CAediting_312228(138498960, -), CAediting_312229(138498963, -), CAediting_312230(138498964, -), CAediting_312231(138498970, -), CAediting_312232(138499032, -), CAediting_312233(138499671, -), CAediting_312234(138499680, -), CAediting_312235(138499692, -), CAediting_312236(138499693, -), CAediting_312237(138499719, -), CAediting_312238(138499720, -), CAediting_312239(138499733, -), CAediting_312240(138499734, -), CAediting_312241(138499740, -), CAediting_312242(138499745, -), CAediting_312243(138499764, -), CAediting_312244(138499769, -), CAediting_312245(138499771, -), CAediting_312246(138499781, -), CAediting_312247(138499975, -), CAediting_312248(138499976, -), CAediting_312249(138499979, -), CAediting_312250(138499985, -), CAediting_312251(138499990, -), CAediting_312252(138499991, -), CAediting_312253(138499999, -), CAediting_312254(138500003, -), CAediting_312255(138500004, -), CAediting_312256(138500009, -), CAediting_312257(138500015, -), CAediting_312258(138500028, -), CAediting_312259(138500039, -), CAediting_312260(138500045, -), CAediting_312261(138500053, -), CAediting_312262(138500055, -), CAediting_312263(138510998, -), CAediting_312264(138510999, -), CAediting_312265(138511001, -), CAediting_312266(138533003, -), CAediting_312267(138533025, -), CAediting_312268(138533037, -), CAediting_312269(138533083, -), CAediting_312270(138533097, -), CAediting_312271(138533100, -), CAediting_312272(138533132, -), CAediting_312273(138533153, -), CAediting_312274(138533218, -), CAediting_312275(138533219, -), CAediting_312276(138533224, -), CAediting_312277(138533228, -), CAediting_312278(138533820, -), CAediting_312279(138533853, -), CAediting_312280(138533863, -), CAediting_312281(138533874, -), CAediting_312282(138533881, -), CAediting_312283(138533882, -), CAediting_312284(138534057, -), CAediting_312285(138539216, -), CAediting_312286(138545958, -), CAediting_312287(138546057, -), CAediting_312288(138546088, -), CAediting_312289(138550475, -), CAediting_312290(138553393, -), CAediting_312291(138554805, -), CAediting_312292(138554807, -), CAediting_312293(138554808, -), CAediting_312294(138554814, -), CAediting_312295(138554831, -), CAediting_312296(138554832, -), CAediting_312297(138554834, -), CAediting_312298(138554837, -), CAediting_312299(138554841, -), CAediting_312300(138554842, -), CAediting_312301(138554843, -), CAediting_312302(138554844, -), CAediting_312303(138554859, -), CAediting_312304(138554864, -), CAediting_312305(138554867, -), CAediting_312306(138554871, -), CAediting_312307(138554877, -), CAediting_312308(138554878, -), CAediting_312309(138554879, -), CAediting_312310(138555509, -), CAediting_312311(138555528, -), CAediting_312312(138555531, -), CAediting_312313(138555542, -), CAediting_312314(138556720, -), CAediting_312315(138587664, -), CAediting_312316(138587672, -), CAediting_312317(138587685, -), CAediting_312318(138587745, -), CAediting_312319(138590699, -),

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RNA editing positional annotations for CEP70 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_312188chr3_138495712_-intronic
CAediting_312189chr3_138495769_-intronic
CAediting_312190chr3_138495770_-intronic
CAediting_312191chr3_138498368_-intronic
CAediting_312192chr3_138498405_-intronic
CAediting_312193chr3_138498434_-intronic
CAediting_312194chr3_138498435_-intronic
CAediting_312195chr3_138498443_-intronic
CAediting_312196chr3_138498444_-intronic
CAediting_312197chr3_138498449_-intronic
CAediting_312198chr3_138498483_-intronic
CAediting_312199chr3_138498499_-intronic
CAediting_312200chr3_138498504_-intronic
CAediting_312201chr3_138498505_-intronic
CAediting_312202chr3_138498506_-intronic
CAediting_312203chr3_138498509_-intronic
CAediting_312204chr3_138498511_-intronic
CAediting_312205chr3_138498512_-intronic
CAediting_312206chr3_138498513_-intronic
CAediting_312207chr3_138498514_-intronic
CAediting_312208chr3_138498515_-intronic
CAediting_312209chr3_138498529_-intronic
CAediting_312210chr3_138498598_-intronic
CAediting_312211chr3_138498606_-intronic
CAediting_312212chr3_138498607_-intronic
CAediting_312213chr3_138498615_-intronic
CAediting_312214chr3_138498620_-intronic
CAediting_312215chr3_138498710_-intronic
CAediting_312216chr3_138498785_-intronic
CAediting_312217chr3_138498791_-intronic
CAediting_312218chr3_138498803_-intronic
CAediting_312219chr3_138498850_-intronic
CAediting_312220chr3_138498881_-intronic
CAediting_312221chr3_138498884_-intronic
CAediting_312222chr3_138498902_-intronic
CAediting_312223chr3_138498906_-intronic
CAediting_312224chr3_138498908_-intronic
CAediting_312225chr3_138498911_-intronic
CAediting_312226chr3_138498937_-intronic
CAediting_312227chr3_138498959_-intronic
CAediting_312228chr3_138498960_-intronic
CAediting_312229chr3_138498963_-intronic
CAediting_312230chr3_138498964_-intronic
CAediting_312231chr3_138498970_-intronic
CAediting_312232chr3_138499032_-intronic
CAediting_312233chr3_138499671_-intronic
CAediting_312234chr3_138499680_-intronic
CAediting_312235chr3_138499692_-intronic
CAediting_312236chr3_138499693_-intronic
CAediting_312237chr3_138499719_-intronic
CAediting_312238chr3_138499720_-intronic
CAediting_312239chr3_138499733_-intronic
CAediting_312240chr3_138499734_-intronic
CAediting_312241chr3_138499740_-intronic
CAediting_312242chr3_138499745_-intronic
CAediting_312243chr3_138499764_-intronic
CAediting_312244chr3_138499769_-intronic
CAediting_312245chr3_138499771_-intronic
CAediting_312246chr3_138499781_-intronic
CAediting_312247chr3_138499975_-UTR3
CAediting_312248chr3_138499976_-UTR3
CAediting_312249chr3_138499979_-UTR3
CAediting_312250chr3_138499985_-UTR3
CAediting_312251chr3_138499990_-UTR3
CAediting_312252chr3_138499991_-UTR3
CAediting_312253chr3_138499999_-UTR3
CAediting_312254chr3_138500003_-UTR3
CAediting_312255chr3_138500004_-UTR3
CAediting_312256chr3_138500009_-UTR3
CAediting_312257chr3_138500015_-UTR3
CAediting_312258chr3_138500028_-UTR3
CAediting_312259chr3_138500039_-UTR3
CAediting_312260chr3_138500045_-UTR3
CAediting_312261chr3_138500053_-UTR3
CAediting_312262chr3_138500055_-UTR3
CAediting_312263chr3_138510998_-intronic
CAediting_312264chr3_138510999_-intronic
CAediting_312265chr3_138511001_-intronic
CAediting_312266chr3_138533003_-ncRNA_intronic
CAediting_312267chr3_138533025_-ncRNA_intronic
CAediting_312268chr3_138533037_-ncRNA_intronic
CAediting_312269chr3_138533083_-ncRNA_intronic
CAediting_312270chr3_138533097_-ncRNA_intronic
CAediting_312271chr3_138533100_-ncRNA_intronic
CAediting_312272chr3_138533132_-ncRNA_intronic
CAediting_312273chr3_138533153_-ncRNA_intronic
CAediting_312274chr3_138533218_-ncRNA_intronic
CAediting_312275chr3_138533219_-ncRNA_intronic
CAediting_312276chr3_138533224_-ncRNA_intronic
CAediting_312277chr3_138533228_-ncRNA_intronic
CAediting_312278chr3_138533820_-ncRNA_intronic
CAediting_312279chr3_138533853_-ncRNA_intronic
CAediting_312280chr3_138533863_-ncRNA_intronic
CAediting_312281chr3_138533874_-ncRNA_intronic
CAediting_312282chr3_138533881_-ncRNA_intronic
CAediting_312283chr3_138533882_-ncRNA_intronic
CAediting_312284chr3_138534057_-ncRNA_intronic
CAediting_312285chr3_138539216_-ncRNA_intronic
CAediting_312286chr3_138545958_-ncRNA_intronic
CAediting_312287chr3_138546057_-ncRNA_intronic
CAediting_312288chr3_138546088_-ncRNA_intronic
CAediting_312289chr3_138550475_-ncRNA_intronic
CAediting_312290chr3_138553393_-ncRNA_intronic
CAediting_312291chr3_138554805_-ncRNA_intronic
CAediting_312292chr3_138554807_-ncRNA_intronic
CAediting_312293chr3_138554808_-ncRNA_intronic
CAediting_312294chr3_138554814_-ncRNA_intronic
CAediting_312295chr3_138554831_-ncRNA_intronic
CAediting_312296chr3_138554832_-ncRNA_intronic
CAediting_312297chr3_138554834_-ncRNA_intronic
CAediting_312298chr3_138554837_-ncRNA_intronic
CAediting_312299chr3_138554841_-ncRNA_intronic
CAediting_312300chr3_138554842_-ncRNA_intronic
CAediting_312301chr3_138554843_-ncRNA_intronic
CAediting_312302chr3_138554844_-ncRNA_intronic
CAediting_312303chr3_138554859_-ncRNA_intronic
CAediting_312304chr3_138554864_-ncRNA_intronic
CAediting_312305chr3_138554867_-ncRNA_intronic
CAediting_312306chr3_138554871_-ncRNA_intronic
CAediting_312307chr3_138554877_-ncRNA_intronic
CAediting_312308chr3_138554878_-ncRNA_intronic
CAediting_312309chr3_138554879_-ncRNA_intronic
CAediting_312310chr3_138555509_-ncRNA_intronic
CAediting_312311chr3_138555528_-ncRNA_intronic
CAediting_312312chr3_138555531_-ncRNA_intronic
CAediting_312313chr3_138555542_-ncRNA_intronic
CAediting_312314chr3_138556720_-ncRNA_intronic
CAediting_312315chr3_138587664_-ncRNA_intronic
CAediting_312316chr3_138587672_-ncRNA_intronic
CAediting_312317chr3_138587685_-ncRNA_intronic
CAediting_312318chr3_138587745_-ncRNA_intronic
CAediting_312319chr3_138590699_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_312188chr3_138495712_-SINEAluAluSx1
CAediting_312189chr3_138495769_-SINEAluAluSx1
CAediting_312190chr3_138495770_-SINEAluAluSx1
CAediting_312191chr3_138498368_-SINEAluAluY
CAediting_312192chr3_138498405_-SINEAluAluY
CAediting_312193chr3_138498434_-SINEAluAluY
CAediting_312194chr3_138498435_-SINEAluAluY
CAediting_312195chr3_138498443_-SINEAluAluY
CAediting_312196chr3_138498444_-SINEAluAluY
CAediting_312197chr3_138498449_-SINEAluAluY
CAediting_312198chr3_138498483_-SINEAluAluY
CAediting_312199chr3_138498499_-SINEAluAluY
CAediting_312200chr3_138498504_-SINEAluAluY
CAediting_312201chr3_138498505_-SINEAluAluY
CAediting_312202chr3_138498506_-SINEAluAluY
CAediting_312203chr3_138498509_-SINEAluAluY
CAediting_312204chr3_138498511_-SINEAluAluY
CAediting_312205chr3_138498512_-SINEAluAluY
CAediting_312206chr3_138498513_-SINEAluAluY
CAediting_312207chr3_138498514_-SINEAluAluY
CAediting_312208chr3_138498515_-SINEAluAluY
CAediting_312209chr3_138498529_-SINEAluAluY
CAediting_312210chr3_138498598_-SINEAluAluY
CAediting_312211chr3_138498606_-SINEAluAluY
CAediting_312212chr3_138498607_-SINEAluAluY
CAediting_312213chr3_138498615_-SINEAluAluY
CAediting_312214chr3_138498620_-SINEAluAluY
CAediting_312216chr3_138498785_-SINEAluAluSz
CAediting_312217chr3_138498791_-SINEAluAluSz
CAediting_312218chr3_138498803_-SINEAluAluSz
CAediting_312219chr3_138498850_-SINEAluAluSz
CAediting_312220chr3_138498881_-SINEAluAluSz
CAediting_312221chr3_138498884_-SINEAluAluSz
CAediting_312222chr3_138498902_-SINEAluAluSz
CAediting_312223chr3_138498906_-SINEAluAluSz
CAediting_312224chr3_138498908_-SINEAluAluSz
CAediting_312225chr3_138498911_-SINEAluAluSz
CAediting_312226chr3_138498937_-SINEAluAluSz
CAediting_312227chr3_138498959_-SINEAluAluSz
CAediting_312228chr3_138498960_-SINEAluAluSz
CAediting_312229chr3_138498963_-SINEAluAluSz
CAediting_312230chr3_138498964_-SINEAluAluSz
CAediting_312231chr3_138498970_-SINEAluAluSz
CAediting_312232chr3_138499032_-SINEAluAluSz
CAediting_312233chr3_138499671_-SINEAluAluJb
CAediting_312234chr3_138499680_-SINEAluAluJb
CAediting_312235chr3_138499692_-SINEAluAluJb
CAediting_312236chr3_138499693_-SINEAluAluJb
CAediting_312237chr3_138499719_-SINEAluAluJb
CAediting_312238chr3_138499720_-SINEAluAluJb
CAediting_312239chr3_138499733_-SINEAluAluJb
CAediting_312240chr3_138499734_-SINEAluAluJb
CAediting_312241chr3_138499740_-SINEAluAluJb
CAediting_312242chr3_138499745_-SINEAluAluJb
CAediting_312243chr3_138499764_-SINEAluAluJb
CAediting_312244chr3_138499769_-SINEAluAluJb
CAediting_312245chr3_138499771_-SINEAluAluJb
CAediting_312246chr3_138499781_-SINEAluAluJb
CAediting_312247chr3_138499975_-SINEAluFLAM_C
CAediting_312248chr3_138499976_-SINEAluFLAM_C
CAediting_312249chr3_138499979_-SINEAluFLAM_C
CAediting_312250chr3_138499985_-SINEAluFLAM_C
CAediting_312251chr3_138499990_-SINEAluFLAM_C
CAediting_312252chr3_138499991_-SINEAluFLAM_C
CAediting_312253chr3_138499999_-SINEAluFLAM_C
CAediting_312254chr3_138500003_-SINEAluAluJr
CAediting_312255chr3_138500004_-SINEAluAluJr
CAediting_312256chr3_138500009_-SINEAluAluJr
CAediting_312257chr3_138500015_-SINEAluAluJr
CAediting_312258chr3_138500028_-SINEAluAluJr
CAediting_312259chr3_138500039_-SINEAluAluJr
CAediting_312260chr3_138500045_-SINEAluAluJr
CAediting_312261chr3_138500053_-SINEAluAluJr
CAediting_312262chr3_138500055_-SINEAluAluJr
CAediting_312263chr3_138510998_-SINEAluAluSg
CAediting_312264chr3_138510999_-SINEAluAluSg
CAediting_312265chr3_138511001_-SINEAluAluSg
CAediting_312266chr3_138533003_-SINEAluAluSx3
CAediting_312267chr3_138533025_-SINEAluAluSx3
CAediting_312268chr3_138533037_-SINEAluAluSx3
CAediting_312269chr3_138533083_-SINEAluAluSx3
CAediting_312270chr3_138533097_-SINEAluAluSx3
CAediting_312271chr3_138533100_-SINEAluAluSx3
CAediting_312272chr3_138533132_-SINEAluAluSx3
CAediting_312273chr3_138533153_-SINEAluAluSx3
CAediting_312274chr3_138533218_-SINEAluAluSx3
CAediting_312275chr3_138533219_-SINEAluAluSx3
CAediting_312276chr3_138533224_-SINEAluAluSx3
CAediting_312277chr3_138533228_-SINEAluAluSx3
CAediting_312278chr3_138533820_-SINEAluAluY
CAediting_312279chr3_138533853_-SINEAluAluY
CAediting_312280chr3_138533863_-SINEAluAluY
CAediting_312281chr3_138533874_-SINEAluAluY
CAediting_312282chr3_138533881_-SINEAluAluY
CAediting_312283chr3_138533882_-SINEAluAluY
CAediting_312284chr3_138534057_-SINEAluAluY
CAediting_312285chr3_138539216_-SINEAluAluSz
CAediting_312286chr3_138545958_-LTRERVKMER11A
CAediting_312287chr3_138546057_-LTRERVKMER11A
CAediting_312288chr3_138546088_-LTRERVKMER11A
CAediting_312289chr3_138550475_-SINEAluAluSq2
CAediting_312290chr3_138553393_-SINEAluAluY
CAediting_312291chr3_138554805_-LINEL1L1PB
CAediting_312292chr3_138554807_-LINEL1L1PB
CAediting_312293chr3_138554808_-LINEL1L1PB
CAediting_312294chr3_138554814_-LINEL1L1PB
CAediting_312295chr3_138554831_-LINEL1L1PB
CAediting_312296chr3_138554832_-LINEL1L1PB
CAediting_312297chr3_138554834_-LINEL1L1PB
CAediting_312298chr3_138554837_-LINEL1L1PB
CAediting_312299chr3_138554841_-LINEL1L1PB
CAediting_312300chr3_138554842_-LINEL1L1PB
CAediting_312301chr3_138554843_-LINEL1L1PB
CAediting_312302chr3_138554844_-LINEL1L1PB
CAediting_312303chr3_138554859_-LINEL1L1PB
CAediting_312304chr3_138554864_-LINEL1L1PB
CAediting_312305chr3_138554867_-LINEL1L1PB
CAediting_312306chr3_138554871_-LINEL1L1PB
CAediting_312307chr3_138554877_-LINEL1L1PB
CAediting_312308chr3_138554878_-LINEL1L1PB
CAediting_312309chr3_138554879_-LINEL1L1PB
CAediting_312310chr3_138555509_-LINEL1L1PB1
CAediting_312311chr3_138555528_-LINEL1L1PB1
CAediting_312312chr3_138555531_-LINEL1L1PB1
CAediting_312313chr3_138555542_-LINEL1L1PB1
CAediting_312314chr3_138556720_-LTRERVKMER11C
CAediting_312315chr3_138587664_-SINEAluAluJr
CAediting_312316chr3_138587672_-SINEAluAluJr
CAediting_312317chr3_138587685_-SINEAluAluJr
CAediting_312318chr3_138587745_-SINEAluAluJr
CAediting_312319chr3_138590699_-SINEAluAluSx3

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RNA A-to-I editing events in the alternative splicing sites for CEP70

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000114107.7.CEP70.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000114107.7.CEP70.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP70

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CEP70

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CEP70

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_312252chr3_138499991_-ENSG00000114107.7ENST00000481834hsa-miR-371a-5p1384999891384999957mer-m8138499988138500008157.00-20.97
CAediting_312252chr3_138499991_-ENSG00000114107.7ENST00000481834hsa-miR-888-5p1384999881384999947mer-m8138499987138500007146.00-11.81
CAediting_312254chr3_138500003_-ENSG00000114107.7ENST00000481834hsa-miR-10400-3p1384999991385000057mer-m8138499998138500019140.00-20.37
CAediting_312254chr3_138500003_-ENSG00000114107.7ENST00000481834hsa-miR-44371384999991385000068mer-1a138499999138500019146.00-19.60
CAediting_312254chr3_138500003_-ENSG00000114107.7ENST00000481834hsa-miR-46741384999991385000057mer-m8138499998138500018147.00-22.80
CAediting_312247chr3_138499975_-ENSG00000114107.7ENST00000481834hsa-miR-18a-3p1384999701384999767mer-m8138499969138499991140.00-26.51
CAediting_312247chr3_138499975_-ENSG00000114107.7ENST00000481834hsa-miR-3173-5p1384999711384999788mer-1a138499971138499993141.00-17.32
CAediting_312247chr3_138499975_-ENSG00000114107.7ENST00000481834hsa-miR-6799-3p1384999711384999788mer-1a138499971138499993144.00-20.10
CAediting_312247chr3_138499975_-ENSG00000114107.7ENST00000481834hsa-miR-874-3p1384999711384999777mer-m8138499970138499992154.00-25.62
CAediting_312251chr3_138499990_-ENSG00000114107.7ENST00000481834hsa-miR-45351384999851384999917mer-m8138499984138500004146.00-23.74
CAediting_312258chr3_138500028_-ENSG00000114107.7ENST00000481834hsa-miR-39431385000241385000307mer-m8138500023138500043146.00-22.28

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_312262chr3_138500055_-ENSG00000114107.7ENST00000481834hsa-miR-1227-3p1385000531385000608mer-1a138500053138500072147-24.79
CAediting_312256chr3_138500009_-ENSG00000114107.7ENST00000481834hsa-miR-1245a1385000071385000137mer-m8138500006138500026141-20.65
CAediting_312253chr3_138499999_-ENSG00000114107.7ENST00000481834hsa-miR-1343-3p1384999961385000027mer-m8138499995138500016140-20.85
CAediting_312258chr3_138500028_-ENSG00000114107.7ENST00000481834hsa-miR-150-5p1385000271385000337mer-m8138500026138500049142-15.65
CAediting_312257chr3_138500015_-ENSG00000114107.7ENST00000481834hsa-miR-188-3p1385000151385000217mer-m8138500014138500033152-22.76
CAediting_312251chr3_138499990_-ENSG00000114107.7ENST00000481834hsa-miR-302a-5p1384999891384999957mer-m8138499988138500012148-11.75
CAediting_312252chr3_138499991_-ENSG00000114107.7ENST00000481834hsa-miR-302a-5p1384999891384999957mer-m8138499988138500012148-11.75
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-36541384999831384999897mer-m8138499982138500002148-18.84
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-378b1384999841384999907mer-m8138499983138500001152-18.59
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-378f1384999841384999907mer-m8138499983138500002152-20.77
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-378h1384999841384999907mer-m8138499983138500003151-22.28
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-378i1384999841384999907mer-m8138499983138500003151-19.21
CAediting_312249chr3_138499979_-ENSG00000114107.7ENST00000481834hsa-miR-3934-3p1384999761384999827mer-1a138499976138499997142-20.06
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-44631384999811384999877mer-m8138499980138499996143-15.39
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-44941384999791384999868mer-1a138499979138499999149-17.57
CAediting_312259chr3_138500039_-ENSG00000114107.7ENST00000481834hsa-miR-4731-5p1385000371385000426mer138500036138500056146-23.16
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-5009-5p1384999851384999917mer-m8138499984138500010145-20.72
CAediting_312251chr3_138499990_-ENSG00000114107.7ENST00000481834hsa-miR-5009-5p1384999851384999917mer-m8138499984138500010145-20.72
CAediting_312253chr3_138499999_-ENSG00000114107.7ENST00000481834hsa-miR-6742-3p1384999961385000038mer-1a138499996138500015145-17.41
CAediting_312257chr3_138500015_-ENSG00000114107.7ENST00000481834hsa-miR-6749-3p1385000121385000187mer-m8138500011138500030148-19.66
CAediting_312258chr3_138500028_-ENSG00000114107.7ENST00000481834hsa-miR-6778-3p1385000251385000317mer-m8138500024138500044140-14.56
CAediting_312253chr3_138499999_-ENSG00000114107.7ENST00000481834hsa-miR-6783-3p1384999961385000027mer-m8138499995138500015146-19.15
CAediting_312260chr3_138500045_-ENSG00000114107.7ENST00000481834hsa-miR-7151-3p1385000451385000517mer-m8138500044138500065141-19.09
CAediting_312250chr3_138499985_-ENSG00000114107.7ENST00000481834hsa-miR-80581384999851384999917mer-m8138499984138500006155-19.81
CAediting_312251chr3_138499990_-ENSG00000114107.7ENST00000481834hsa-miR-80581384999851384999917mer-m8138499984138500006155-19.81
CAediting_312256chr3_138500009_-ENSG00000114107.7ENST00000481834hsa-miR-80791385000071385000137mer-m8138500006138500025153-15.79

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000114107.7ENST00000481834hsa-miR-624-3p1384999591384999657mer-m8138499958138499978146-17.71
CAediting_1229413chr17_67471544_+ENSG00000114107.7ENST00000459695hsa-miR-548aa1384970121384970198mer-1a138497012138497034143-9.64

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_228905chr2_188297554_+ENSG00000114107.7ENST00000464035hsa-miR-561-3p1385369431385369497mer-m8138536942138536963145-5.29

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CEP70

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000481834.4protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_312247ENST00000481834.4chr3_138499975_--490.50-488.00-498.50
CAediting_312248ENST00000481834.4chr3_138499976_--490.20-488.00-498.50
CAediting_312249ENST00000481834.4chr3_138499979_--488.50-488.00-498.50
CAediting_312250ENST00000481834.4chr3_138499985_--491.20-488.00-498.50
CAediting_312251ENST00000481834.4chr3_138499990_--488.70-488.00-498.50
CAediting_312252ENST00000481834.4chr3_138499991_--487.30-488.00-498.50
CAediting_312253ENST00000481834.4chr3_138499999_--488.00-488.00-498.50
CAediting_312254ENST00000481834.4chr3_138500003_--489.80-488.00-498.50
CAediting_312255ENST00000481834.4chr3_138500004_--488.40-488.00-498.50
CAediting_312256ENST00000481834.4chr3_138500009_--488.20-488.00-498.50
CAediting_312257ENST00000481834.4chr3_138500015_--487.00-488.00-498.50
CAediting_312258ENST00000481834.4chr3_138500028_--487.10-488.00-498.50
CAediting_312259ENST00000481834.4chr3_138500039_--487.20-488.00-498.50
CAediting_312260ENST00000481834.4chr3_138500045_--487.60-488.00-498.50
CAediting_312261ENST00000481834.4chr3_138500053_--488.80-488.00-498.50
CAediting_312262ENST00000481834.4chr3_138500055_--487.60-488.00-498.50

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Relation with ADAR for CEP70

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
BRCACAediting_312250chr3_138499985_-4.27892673464035e-060.344300001294292....
LUSCCAediting_312250chr3_138499985_-0.001347931409623410.436909692509732....
PRADCAediting_312250chr3_138499985_-0.01424139960228160.298215733834807....
THCACAediting_312250chr3_138499985_-1.61806491663247e-060.409217507836969....
KIRCCAediting_312250chr3_138499985_-0.002053363369505510.3460131950600860.006305168280410950.308688299351946..
KIRPCAediting_312250chr3_138499985_-....0.03329660403086880.29861369390008
BLCACAediting_312252chr3_138499991_-0.01264429994064970.27939764732979....
LGGCAediting_312252chr3_138499991_-0.00651399187902840.216975644735179..0.04673364949510020.159485929847426
BRCACAediting_312252chr3_138499991_-3.91598263398449e-100.333769802054566....
LIHCCAediting_312252chr3_138499991_-0.0003112232109779990.456953398681555..0.02596518808972330.292328687543757
CESCCAediting_312252chr3_138499991_-5.0448571421796e-050.391958166599324....
LUADCAediting_312252chr3_138499991_-0.005678771362938210.23428339678003....
LUSCCAediting_312252chr3_138499991_-2.84407566383517e-050.376653200424909....
PRADCAediting_312252chr3_138499991_-0.00140360835357230.245209363854829....
THCACAediting_312252chr3_138499991_-6.37740800100822e-080.295310361325449....
KIRCCAediting_312252chr3_138499991_-0.009501206447970730.198975762754401....
UCECCAediting_312252chr3_138499991_-3.19428731137813e-050.348608462532057....
KIRPCAediting_312252chr3_138499991_-0.001982194934224760.258331660466523....
ESCACAediting_312252chr3_138499991_-..0.0004855317719132510.471037089975666..
OVCAediting_312252chr3_138499991_-0.01356890000651870.203894443700109....
SARCCAediting_312252chr3_138499991_-0.01950427192193790.305964283677557....
THYMCAediting_312252chr3_138499991_-0.0009805335705012930.355296002422361..0.0001369329780427790.406536128362259
BRCACAediting_312254chr3_138500003_-....0.008357394595370190.365481595779268
BRCACAediting_312260chr3_138500045_-3.92670835648022e-110.4442879298619....
THCACAediting_312260chr3_138500045_-0.03026953719034880.247099956697421....
KIRCCAediting_312260chr3_138500045_-0.007773847169088080.320174221530632....
UCECCAediting_312260chr3_138500045_-0.03898583049831220.269524841131634....

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Relation with cancer stages for CEP70

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
UCECclinical_stageCAediting_312260chr3_138500045_-0.00817014130669976-0.341242324379947

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Relation with survival for CEP70

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CEP70

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for CEP70

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource