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Editing gene: SLC8B1 (CAeditome ID:80024)

Gene summary for SLC8B1

Gene summary

Gene information	Gene symbol	SLC8B1
	Gene ID	80024
	Gene name	solute carrier family 8 member B1
	Synonyms	NCKX6\|NCLX\|SLC24A6
	Cytomap	12q24.13
	Type of gene	protein-coding
	Description	mitochondrial sodium/calcium exchanger proteinNa(+)/K(+)/Ca(2+)-exchange protein 6sodium/calcium exchanger protein, mitochondrialsodium/potassium/calcium exchanger 6, mitochondrialsolute carrier family 24 (sodium/lithium/calcium exchanger), member 6s
	Modification date	20210518
	UniProtAcc	Q6J4K2
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
SLC8B1	GO:0005432	Mitochondrial sodium/calcium exchanger protein	23056385
SLC8B1	GO:0005432	Mitochondrial sodium/calcium exchanger protein	24898248
SLC8B1	GO:0005432	Mitochondrial sodium/calcium exchanger protein	28219928
SLC8B1	GO:0006851	Mitochondrial sodium/calcium exchanger protein	23056385
SLC8B1	GO:0006851	Mitochondrial sodium/calcium exchanger protein	24898248
SLC8B1	GO:0042593	Mitochondrial sodium/calcium exchanger protein	23056385
SLC8B1	GO:0050796	Mitochondrial sodium/calcium exchanger protein	23056385
SLC8B1	GO:0051560	Mitochondrial sodium/calcium exchanger protein	24898248
SLC8B1	GO:0099093	Mitochondrial sodium/calcium exchanger protein	24898248
SLC8B1	GO:2001256	Mitochondrial sodium/calcium exchanger protein	28219928
SLC8B1	GO:0030061	Mitochondrial sodium/calcium exchanger protein	20018762
SLC8B1	GO:0032592	Mitochondrial sodium/calcium exchanger protein	23056385

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RNA A-to-I events for SLC8B1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000089060.10

RNA A-to-I editing events in Cancer.

CAediting_930076(113300225, -), CAediting_930077(113300233, -), CAediting_930078(113300234, -), CAediting_930079(113300235, -), CAediting_930080(113300243, -), CAediting_930081(113300252, -), CAediting_930082(113300326, -), CAediting_930083(113300332, -), CAediting_930084(113300335, -), CAediting_930085(113300341, -), CAediting_930086(113300349, -), CAediting_930087(113300350, -), CAediting_930088(113300396, -), CAediting_930089(113300400, -), CAediting_930090(113300401, -), CAediting_930091(113300406, -), CAediting_930092(113300439, -), CAediting_930093(113300442, -), CAediting_930094(113300461, -), CAediting_930095(113300464, -), CAediting_930096(113300475, -), CAediting_930097(113301399, -), CAediting_930098(113301518, -), CAediting_930099(113304166, -), CAediting_930100(113304529, -), CAediting_930101(113304606, -), CAediting_930102(113304798, -), CAediting_930103(113304876, -), CAediting_930104(113304882, -), CAediting_930105(113305959, -), CAediting_930106(113306845, -), CAediting_930107(113308102, -), CAediting_930108(113308130, -), CAediting_930109(113308181, -), CAediting_930110(113308184, -), CAediting_930111(113308246, -), CAediting_930112(113308251, -), CAediting_930113(113308263, -), CAediting_930114(113308283, -), CAediting_930115(113308284, -), CAediting_930116(113308295, -), CAediting_930117(113308302, -), CAediting_930118(113308315, -), CAediting_930119(113308328, -), CAediting_930120(113308340, -), CAediting_930121(113308564, -), CAediting_930122(113308576, -), CAediting_930123(113308585, -), CAediting_930124(113308946, -), CAediting_930125(113308965, -), CAediting_930126(113308992, -), CAediting_930127(113309018, -), CAediting_930128(113309021, -), CAediting_930129(113309022, -), CAediting_930130(113309037, -), CAediting_930131(113309127, -), CAediting_930132(113309533, -), CAediting_930133(113309536, -), CAediting_930134(113309537, -), CAediting_930135(113309581, -), CAediting_930136(113309586, -), CAediting_930137(113309587, -), CAediting_930138(113309632, -), CAediting_930139(113309634, -), CAediting_930140(113309644, -), CAediting_930141(113309648, -), CAediting_930142(113309661, -), CAediting_930143(113309674, -), CAediting_930144(113309694, -), CAediting_930145(113309710, -), CAediting_930146(113309712, -), CAediting_930147(113309750, -), CAediting_930148(113309787, -), CAediting_930149(113309834, -), CAediting_930150(113311338, -), CAediting_930151(113311585, -), CAediting_930152(113311614, -), CAediting_930153(113311776, -), CAediting_930154(113311780, -), CAediting_930155(113311793, -), CAediting_930156(113311796, -), CAediting_930157(113311801, -), CAediting_930158(113311819, -), CAediting_930159(113311824, -), CAediting_930160(113311828, -), CAediting_930161(113311832, -), CAediting_930162(113311835, -), CAediting_930163(113311836, -), CAediting_930164(113311842, -), CAediting_930165(113311844, -), CAediting_930166(113311848, -), CAediting_930167(113311850, -), CAediting_930168(113311852, -), CAediting_930169(113311858, -), CAediting_930170(113312189, -), CAediting_930171(113312190, -), CAediting_930172(113312286, -), CAediting_930173(113312350, -), CAediting_930174(113312358, -), CAediting_930175(113312845, -), CAediting_930176(113312991, -), CAediting_930177(113312998, -), CAediting_930178(113313002, -), CAediting_930179(113313003, -), CAediting_930180(113313017, -), CAediting_930181(113313022, -), CAediting_930182(113313043, -), CAediting_930183(113319817, -), CAediting_930184(113319882, -), CAediting_930185(113319901, -), CAediting_930186(113319957, -), CAediting_930187(113319966, -), CAediting_930188(113319968, -), CAediting_930189(113319992, -), CAediting_930190(113322855, -), CAediting_930191(113322936, -), CAediting_930192(113324237, -), CAediting_930193(113324261, -), CAediting_930194(113326464, -), CAediting_930195(113326540, -), CAediting_930196(113326571, -), CAediting_930197(113326640, -), CAediting_930198(113326774, -), CAediting_930199(113326775, -), CAediting_930200(113327866, -), CAediting_930201(113328324, -), CAediting_930202(113328781, -), CAediting_930203(113328812, -), CAediting_930204(113328814, -), CAediting_930205(113328848, -), CAediting_930206(113328849, -), CAediting_930207(113328857, -), CAediting_930208(113328873, -), CAediting_930209(113328880, -), CAediting_930210(113328889, -), CAediting_930211(113328890, -), CAediting_930212(113328898, -), CAediting_930213(113328922, -), CAediting_930214(113328946, -), CAediting_930215(113328947, -), CAediting_930216(113328950, -), CAediting_930217(113332302, -), CAediting_930218(113332332, -), CAediting_930219(113332340, -), CAediting_930220(113332361, -), CAediting_930221(113332429, -), CAediting_930222(113332516, -), CAediting_930223(113341345, -), CAediting_930224(113342605, -), CAediting_930225(113348302, -), CAediting_930226(113348372, -), CAediting_930227(113348533, -), CAediting_930228(113348534, -), CAediting_930229(113352697, -), CAediting_930230(113352862, -), CAediting_930231(113352877, -), CAediting_930232(113352891, -),

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RNA editing positional annotations for SLC8B1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_930076	chr12_113300225_-	ncRNA_intronic
CAediting_930077	chr12_113300233_-	ncRNA_intronic
CAediting_930078	chr12_113300234_-	ncRNA_intronic
CAediting_930079	chr12_113300235_-	ncRNA_intronic
CAediting_930080	chr12_113300243_-	ncRNA_intronic
CAediting_930081	chr12_113300252_-	ncRNA_intronic
CAediting_930082	chr12_113300326_-	ncRNA_intronic
CAediting_930083	chr12_113300332_-	ncRNA_intronic
CAediting_930084	chr12_113300335_-	ncRNA_intronic
CAediting_930085	chr12_113300341_-	ncRNA_intronic
CAediting_930086	chr12_113300349_-	ncRNA_intronic
CAediting_930087	chr12_113300350_-	ncRNA_intronic
CAediting_930088	chr12_113300396_-	ncRNA_intronic
CAediting_930089	chr12_113300400_-	ncRNA_intronic
CAediting_930090	chr12_113300401_-	ncRNA_intronic
CAediting_930091	chr12_113300406_-	ncRNA_intronic
CAediting_930092	chr12_113300439_-	ncRNA_intronic
CAediting_930093	chr12_113300442_-	ncRNA_intronic
CAediting_930094	chr12_113300461_-	ncRNA_intronic
CAediting_930095	chr12_113300464_-	ncRNA_intronic
CAediting_930096	chr12_113300475_-	ncRNA_intronic
CAediting_930097	chr12_113301399_-	ncRNA_intronic
CAediting_930098	chr12_113301518_-	ncRNA_intronic
CAediting_930099	chr12_113304166_-	ncRNA_intronic
CAediting_930100	chr12_113304529_-	ncRNA_intronic
CAediting_930101	chr12_113304606_-	ncRNA_intronic
CAediting_930102	chr12_113304798_-	ncRNA_intronic
CAediting_930103	chr12_113304876_-	ncRNA_intronic
CAediting_930104	chr12_113304882_-	ncRNA_intronic
CAediting_930105	chr12_113305959_-	ncRNA_intronic
CAediting_930106	chr12_113306845_-	ncRNA_intronic
CAediting_930107	chr12_113308102_-	ncRNA_intronic
CAediting_930108	chr12_113308130_-	ncRNA_intronic
CAediting_930109	chr12_113308181_-	ncRNA_intronic
CAediting_930110	chr12_113308184_-	ncRNA_intronic
CAediting_930111	chr12_113308246_-	ncRNA_intronic
CAediting_930112	chr12_113308251_-	ncRNA_intronic
CAediting_930113	chr12_113308263_-	ncRNA_intronic
CAediting_930114	chr12_113308283_-	ncRNA_intronic
CAediting_930115	chr12_113308284_-	ncRNA_intronic
CAediting_930116	chr12_113308295_-	ncRNA_intronic
CAediting_930117	chr12_113308302_-	ncRNA_intronic
CAediting_930118	chr12_113308315_-	ncRNA_intronic
CAediting_930119	chr12_113308328_-	ncRNA_intronic
CAediting_930120	chr12_113308340_-	ncRNA_intronic
CAediting_930121	chr12_113308564_-	ncRNA_intronic
CAediting_930122	chr12_113308576_-	ncRNA_intronic
CAediting_930123	chr12_113308585_-	ncRNA_intronic
CAediting_930124	chr12_113308946_-	ncRNA_intronic
CAediting_930125	chr12_113308965_-	ncRNA_intronic
CAediting_930126	chr12_113308992_-	ncRNA_intronic
CAediting_930127	chr12_113309018_-	ncRNA_intronic
CAediting_930128	chr12_113309021_-	ncRNA_intronic
CAediting_930129	chr12_113309022_-	ncRNA_intronic
CAediting_930130	chr12_113309037_-	ncRNA_intronic
CAediting_930131	chr12_113309127_-	ncRNA_intronic
CAediting_930132	chr12_113309533_-	ncRNA_intronic
CAediting_930133	chr12_113309536_-	ncRNA_intronic
CAediting_930134	chr12_113309537_-	ncRNA_intronic
CAediting_930135	chr12_113309581_-	ncRNA_intronic
CAediting_930136	chr12_113309586_-	ncRNA_intronic
CAediting_930137	chr12_113309587_-	ncRNA_intronic
CAediting_930138	chr12_113309632_-	ncRNA_intronic
CAediting_930139	chr12_113309634_-	ncRNA_intronic
CAediting_930140	chr12_113309644_-	ncRNA_intronic
CAediting_930141	chr12_113309648_-	ncRNA_intronic
CAediting_930142	chr12_113309661_-	ncRNA_intronic
CAediting_930143	chr12_113309674_-	ncRNA_intronic
CAediting_930144	chr12_113309694_-	ncRNA_intronic
CAediting_930145	chr12_113309710_-	ncRNA_intronic
CAediting_930146	chr12_113309712_-	ncRNA_intronic
CAediting_930147	chr12_113309750_-	ncRNA_intronic
CAediting_930148	chr12_113309787_-	ncRNA_intronic
CAediting_930149	chr12_113309834_-	ncRNA_intronic
CAediting_930150	chr12_113311338_-	ncRNA_intronic
CAediting_930151	chr12_113311585_-	ncRNA_intronic
CAediting_930152	chr12_113311614_-	ncRNA_intronic
CAediting_930153	chr12_113311776_-	ncRNA_intronic
CAediting_930154	chr12_113311780_-	ncRNA_intronic
CAediting_930155	chr12_113311793_-	ncRNA_intronic
CAediting_930156	chr12_113311796_-	ncRNA_intronic
CAediting_930157	chr12_113311801_-	ncRNA_intronic
CAediting_930158	chr12_113311819_-	ncRNA_intronic
CAediting_930159	chr12_113311824_-	ncRNA_intronic
CAediting_930160	chr12_113311828_-	ncRNA_intronic
CAediting_930161	chr12_113311832_-	ncRNA_intronic
CAediting_930162	chr12_113311835_-	ncRNA_intronic
CAediting_930163	chr12_113311836_-	ncRNA_intronic
CAediting_930164	chr12_113311842_-	ncRNA_intronic
CAediting_930165	chr12_113311844_-	ncRNA_intronic
CAediting_930166	chr12_113311848_-	ncRNA_intronic
CAediting_930167	chr12_113311850_-	ncRNA_intronic
CAediting_930168	chr12_113311852_-	ncRNA_intronic
CAediting_930169	chr12_113311858_-	ncRNA_intronic
CAediting_930170	chr12_113312189_-	ncRNA_intronic
CAediting_930171	chr12_113312190_-	ncRNA_intronic
CAediting_930172	chr12_113312286_-	ncRNA_intronic
CAediting_930173	chr12_113312350_-	ncRNA_intronic
CAediting_930174	chr12_113312358_-	ncRNA_intronic
CAediting_930175	chr12_113312845_-	ncRNA_intronic
CAediting_930176	chr12_113312991_-	ncRNA_intronic
CAediting_930177	chr12_113312998_-	ncRNA_intronic
CAediting_930178	chr12_113313002_-	ncRNA_intronic
CAediting_930179	chr12_113313003_-	ncRNA_intronic
CAediting_930180	chr12_113313017_-	ncRNA_intronic
CAediting_930181	chr12_113313022_-	ncRNA_intronic
CAediting_930182	chr12_113313043_-	ncRNA_intronic
CAediting_930183	chr12_113319817_-	ncRNA_intronic
CAediting_930184	chr12_113319882_-	ncRNA_intronic
CAediting_930185	chr12_113319901_-	ncRNA_intronic
CAediting_930186	chr12_113319957_-	ncRNA_intronic
CAediting_930187	chr12_113319966_-	ncRNA_intronic
CAediting_930188	chr12_113319968_-	ncRNA_intronic
CAediting_930189	chr12_113319992_-	ncRNA_exonic
CAediting_930190	chr12_113322855_-	ncRNA_intronic
CAediting_930191	chr12_113322936_-	ncRNA_intronic
CAediting_930192	chr12_113324237_-	ncRNA_intronic
CAediting_930193	chr12_113324261_-	ncRNA_intronic
CAediting_930194	chr12_113326464_-	ncRNA_intronic
CAediting_930195	chr12_113326540_-	ncRNA_intronic
CAediting_930196	chr12_113326571_-	ncRNA_intronic
CAediting_930197	chr12_113326640_-	ncRNA_intronic
CAediting_930198	chr12_113326774_-	ncRNA_intronic
CAediting_930199	chr12_113326775_-	ncRNA_intronic
CAediting_930200	chr12_113327866_-	ncRNA_intronic
CAediting_930201	chr12_113328324_-	ncRNA_intronic
CAediting_930202	chr12_113328781_-	ncRNA_intronic
CAediting_930203	chr12_113328812_-	ncRNA_intronic
CAediting_930204	chr12_113328814_-	ncRNA_intronic
CAediting_930205	chr12_113328848_-	ncRNA_intronic
CAediting_930206	chr12_113328849_-	ncRNA_intronic
CAediting_930207	chr12_113328857_-	ncRNA_intronic
CAediting_930208	chr12_113328873_-	ncRNA_intronic
CAediting_930209	chr12_113328880_-	ncRNA_intronic
CAediting_930210	chr12_113328889_-	ncRNA_intronic
CAediting_930211	chr12_113328890_-	ncRNA_intronic
CAediting_930212	chr12_113328898_-	ncRNA_intronic
CAediting_930213	chr12_113328922_-	ncRNA_intronic
CAediting_930214	chr12_113328946_-	ncRNA_intronic
CAediting_930215	chr12_113328947_-	ncRNA_intronic
CAediting_930216	chr12_113328950_-	ncRNA_intronic
CAediting_930217	chr12_113332302_-	ncRNA_intronic
CAediting_930218	chr12_113332332_-	ncRNA_intronic
CAediting_930219	chr12_113332340_-	ncRNA_intronic
CAediting_930220	chr12_113332361_-	ncRNA_intronic
CAediting_930221	chr12_113332429_-	ncRNA_intronic
CAediting_930222	chr12_113332516_-	ncRNA_intronic
CAediting_930223	chr12_113341345_-	ncRNA_intronic
CAediting_930224	chr12_113342605_-	ncRNA_intronic
CAediting_930225	chr12_113348302_-	ncRNA_intronic
CAediting_930226	chr12_113348372_-	ncRNA_intronic
CAediting_930227	chr12_113348533_-	ncRNA_intronic
CAediting_930228	chr12_113348534_-	ncRNA_intronic
CAediting_930229	chr12_113352697_-	ncRNA_intronic
CAediting_930230	chr12_113352862_-	ncRNA_intronic
CAediting_930231	chr12_113352877_-	ncRNA_intronic
CAediting_930232	chr12_113352891_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_930076	chr12_113300225_-	SINE	Alu	AluSx1
CAediting_930077	chr12_113300233_-	SINE	Alu	AluSx1
CAediting_930078	chr12_113300234_-	SINE	Alu	AluSx1
CAediting_930079	chr12_113300235_-	SINE	Alu	AluSx1
CAediting_930080	chr12_113300243_-	SINE	Alu	AluSx1
CAediting_930081	chr12_113300252_-	SINE	Alu	AluSx1
CAediting_930082	chr12_113300326_-	SINE	Alu	AluSx1
CAediting_930083	chr12_113300332_-	SINE	Alu	AluSx1
CAediting_930084	chr12_113300335_-	SINE	Alu	AluSx1
CAediting_930085	chr12_113300341_-	SINE	Alu	AluSx1
CAediting_930086	chr12_113300349_-	SINE	Alu	AluSx1
CAediting_930087	chr12_113300350_-	SINE	Alu	AluSx1
CAediting_930088	chr12_113300396_-	SINE	Alu	AluSx1
CAediting_930089	chr12_113300400_-	SINE	Alu	AluSx1
CAediting_930090	chr12_113300401_-	SINE	Alu	AluSx1
CAediting_930091	chr12_113300406_-	SINE	Alu	AluSx1
CAediting_930092	chr12_113300439_-	SINE	Alu	AluSx1
CAediting_930093	chr12_113300442_-	SINE	Alu	AluSx1
CAediting_930094	chr12_113300461_-	SINE	Alu	AluSx1
CAediting_930095	chr12_113300464_-	SINE	Alu	AluSx1
CAediting_930096	chr12_113300475_-	SINE	Alu	AluSx1
CAediting_930097	chr12_113301399_-	SINE	Alu	AluSq2
CAediting_930098	chr12_113301518_-	SINE	Alu	AluSq2
CAediting_930099	chr12_113304166_-	SINE	Alu	AluSz
CAediting_930100	chr12_113304529_-	SINE	Alu	FLAM_C
CAediting_930101	chr12_113304606_-	SINE	Alu	FLAM_C
CAediting_930102	chr12_113304798_-	SINE	Alu	AluJb
CAediting_930103	chr12_113304876_-	SINE	Alu	AluJb
CAediting_930104	chr12_113304882_-	SINE	Alu	AluJb
CAediting_930105	chr12_113305959_-	SINE	Alu	AluSx1
CAediting_930106	chr12_113306845_-	SINE	Alu	AluSx1
CAediting_930107	chr12_113308102_-	SINE	Alu	AluSx
CAediting_930108	chr12_113308130_-	SINE	Alu	AluSx
CAediting_930109	chr12_113308181_-	SINE	Alu	AluSx
CAediting_930110	chr12_113308184_-	SINE	Alu	AluSx
CAediting_930111	chr12_113308246_-	SINE	Alu	AluSx
CAediting_930112	chr12_113308251_-	SINE	Alu	AluSx
CAediting_930113	chr12_113308263_-	SINE	Alu	AluSx
CAediting_930114	chr12_113308283_-	SINE	Alu	AluSx
CAediting_930115	chr12_113308284_-	SINE	Alu	AluSx
CAediting_930116	chr12_113308295_-	SINE	Alu	AluSx
CAediting_930117	chr12_113308302_-	SINE	Alu	AluSx
CAediting_930118	chr12_113308315_-	SINE	Alu	AluSx
CAediting_930119	chr12_113308328_-	SINE	Alu	AluSx
CAediting_930120	chr12_113308340_-	SINE	Alu	AluSx
CAediting_930121	chr12_113308564_-	LINE	L1	L1MB8
CAediting_930122	chr12_113308576_-	LINE	L1	L1MB8
CAediting_930123	chr12_113308585_-	LINE	L1	L1MB8
CAediting_930124	chr12_113308946_-	SINE	Alu	AluSx1
CAediting_930125	chr12_113308965_-	SINE	Alu	AluSx1
CAediting_930126	chr12_113308992_-	SINE	Alu	AluSx1
CAediting_930127	chr12_113309018_-	SINE	Alu	AluSx1
CAediting_930128	chr12_113309021_-	SINE	Alu	AluSx1
CAediting_930129	chr12_113309022_-	SINE	Alu	AluSx1
CAediting_930130	chr12_113309037_-	SINE	Alu	AluSx1
CAediting_930131	chr12_113309127_-	SINE	Alu	AluSx1
CAediting_930132	chr12_113309533_-	SINE	Alu	AluJr
CAediting_930133	chr12_113309536_-	SINE	Alu	AluJr
CAediting_930134	chr12_113309537_-	SINE	Alu	AluJr
CAediting_930135	chr12_113309581_-	SINE	Alu	AluJr
CAediting_930136	chr12_113309586_-	SINE	Alu	AluJr
CAediting_930137	chr12_113309587_-	SINE	Alu	AluJr
CAediting_930138	chr12_113309632_-	SINE	Alu	AluJr
CAediting_930139	chr12_113309634_-	SINE	Alu	AluJr
CAediting_930140	chr12_113309644_-	SINE	Alu	AluJr
CAediting_930141	chr12_113309648_-	SINE	Alu	AluJr
CAediting_930142	chr12_113309661_-	SINE	Alu	AluJr
CAediting_930143	chr12_113309674_-	SINE	Alu	AluJr
CAediting_930144	chr12_113309694_-	SINE	Alu	AluJr
CAediting_930145	chr12_113309710_-	SINE	Alu	AluJr
CAediting_930146	chr12_113309712_-	SINE	Alu	AluJr
CAediting_930147	chr12_113309750_-	SINE	Alu	AluJr
CAediting_930148	chr12_113309787_-	LINE	L1	L1MB8
CAediting_930149	chr12_113309834_-	LINE	L1	L1MB8
CAediting_930150	chr12_113311338_-	SINE	Alu	AluSx
CAediting_930151	chr12_113311585_-	SINE	Alu	AluJb
CAediting_930152	chr12_113311614_-	SINE	Alu	AluJb
CAediting_930153	chr12_113311776_-	SINE	Alu	AluJr
CAediting_930154	chr12_113311780_-	SINE	Alu	AluJr
CAediting_930155	chr12_113311793_-	SINE	Alu	AluJr
CAediting_930156	chr12_113311796_-	SINE	Alu	AluJr
CAediting_930157	chr12_113311801_-	SINE	Alu	AluJr
CAediting_930158	chr12_113311819_-	SINE	Alu	AluJr
CAediting_930159	chr12_113311824_-	SINE	Alu	AluJr
CAediting_930160	chr12_113311828_-	SINE	Alu	AluJr
CAediting_930161	chr12_113311832_-	SINE	Alu	AluJr
CAediting_930162	chr12_113311835_-	SINE	Alu	AluJr
CAediting_930163	chr12_113311836_-	SINE	Alu	AluJr
CAediting_930164	chr12_113311842_-	SINE	Alu	AluJr
CAediting_930165	chr12_113311844_-	SINE	Alu	AluJr
CAediting_930166	chr12_113311848_-	SINE	Alu	AluJr
CAediting_930167	chr12_113311850_-	SINE	Alu	AluJr
CAediting_930168	chr12_113311852_-	SINE	Alu	AluJr
CAediting_930169	chr12_113311858_-	SINE	Alu	AluJr
CAediting_930170	chr12_113312189_-	SINE	Alu	AluSx
CAediting_930171	chr12_113312190_-	SINE	Alu	AluSx
CAediting_930172	chr12_113312286_-	SINE	Alu	AluSx
CAediting_930173	chr12_113312350_-	SINE	Alu	AluSx
CAediting_930174	chr12_113312358_-	SINE	Alu	AluSx
CAediting_930175	chr12_113312845_-	DNA	hAT-Charlie	MER113
CAediting_930176	chr12_113312991_-	SINE	Alu	AluSx1
CAediting_930177	chr12_113312998_-	SINE	Alu	AluSx1
CAediting_930178	chr12_113313002_-	SINE	Alu	AluSx1
CAediting_930179	chr12_113313003_-	SINE	Alu	AluSx1
CAediting_930180	chr12_113313017_-	SINE	Alu	AluSx1
CAediting_930181	chr12_113313022_-	SINE	Alu	AluSx1
CAediting_930182	chr12_113313043_-	SINE	Alu	AluSx1
CAediting_930183	chr12_113319817_-	SINE	Alu	AluJo
CAediting_930184	chr12_113319882_-	SINE	Alu	AluJo
CAediting_930185	chr12_113319901_-	SINE	Alu	AluJo
CAediting_930186	chr12_113319957_-	SINE	Alu	AluJo
CAediting_930187	chr12_113319966_-	SINE	Alu	AluJo
CAediting_930188	chr12_113319968_-	SINE	Alu	AluJo
CAediting_930189	chr12_113319992_-	SINE	Alu	AluJo
CAediting_930190	chr12_113322855_-	SINE	Alu	AluJo
CAediting_930191	chr12_113322936_-	SINE	Alu	AluJo
CAediting_930192	chr12_113324237_-	SINE	Alu	AluJr
CAediting_930193	chr12_113324261_-	SINE	Alu	AluJr
CAediting_930194	chr12_113326464_-	SINE	Alu	AluSz
CAediting_930195	chr12_113326540_-	SINE	Alu	AluSz
CAediting_930196	chr12_113326571_-	SINE	Alu	AluSz
CAediting_930197	chr12_113326640_-	SINE	Alu	AluSz
CAediting_930198	chr12_113326774_-	SINE	Alu	AluJr
CAediting_930199	chr12_113326775_-	SINE	Alu	AluJr
CAediting_930200	chr12_113327866_-	SINE	Alu	AluSq2
CAediting_930201	chr12_113328324_-	SINE	Alu	AluJb
CAediting_930202	chr12_113328781_-	SINE	Alu	AluSx1
CAediting_930203	chr12_113328812_-	SINE	Alu	AluSx1
CAediting_930204	chr12_113328814_-	SINE	Alu	AluSx1
CAediting_930205	chr12_113328848_-	SINE	Alu	AluSx1
CAediting_930206	chr12_113328849_-	SINE	Alu	AluSx1
CAediting_930207	chr12_113328857_-	SINE	Alu	AluSx1
CAediting_930208	chr12_113328873_-	SINE	Alu	AluSx1
CAediting_930209	chr12_113328880_-	SINE	Alu	AluSx1
CAediting_930210	chr12_113328889_-	SINE	Alu	AluSx1
CAediting_930211	chr12_113328890_-	SINE	Alu	AluSx1
CAediting_930212	chr12_113328898_-	SINE	Alu	AluSx1
CAediting_930213	chr12_113328922_-	SINE	Alu	AluSx1
CAediting_930214	chr12_113328946_-	SINE	Alu	AluSx1
CAediting_930215	chr12_113328947_-	SINE	Alu	AluSx1
CAediting_930216	chr12_113328950_-	SINE	Alu	AluSx1
CAediting_930217	chr12_113332302_-	SINE	Alu	AluSz6
CAediting_930218	chr12_113332332_-	SINE	Alu	AluSz6
CAediting_930219	chr12_113332340_-	SINE	Alu	AluSz6
CAediting_930220	chr12_113332361_-	SINE	Alu	AluSz6
CAediting_930221	chr12_113332429_-	SINE	Alu	AluSz6
CAediting_930222	chr12_113332516_-	SINE	Alu	AluSz6
CAediting_930223	chr12_113341345_-	SINE	Alu	AluSz6
CAediting_930224	chr12_113342605_-	SINE	Alu	AluSx1
CAediting_930225	chr12_113348302_-	SINE	Alu	FLAM_C
CAediting_930226	chr12_113348372_-	SINE	Alu	FLAM_C
CAediting_930227	chr12_113348533_-	SINE	Alu	AluSx1
CAediting_930228	chr12_113348534_-	SINE	Alu	AluSx1
CAediting_930229	chr12_113352697_-	SINE	Alu	AluJb
CAediting_930230	chr12_113352862_-	SINE	Alu	AluJb
CAediting_930231	chr12_113352877_-	SINE	Alu	AluJb
CAediting_930232	chr12_113352891_-	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for SLC8B1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_930120	chr12_113308340_-	113308336:113308358	3SS	0+2i	TTTTTCTTTTTTCGAGACAGAGT	4.2	TTTTTCTTTTTTCGAGACGGAGT	-3.75
MEX_2	CAediting_930120	chr12_113308340_-	113308336:113308358	3SS	0+2i	TTTTTCTTTTTTCGAGACAGAGT	4.2	TTTTTCTTTTTTCGAGACGGAGT	-3.75

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000089060.10.SLC8B1.

Correlation between RNA A-to-I editing and PSI for ENSG00000089060.10.SLC8B1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SLC8B1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for SLC8B1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SLC8B1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229415	chr17_67471547_+	ENSG00000089060.10	ENST00000552014	hsa-miR-548aa	113299552	113299558	7mer-m8	113299551	113299575	143	-10.39
CAediting_1229415	chr17_67471547_+	ENSG00000089060.10	ENST00000202831	hsa-miR-548aa	113299552	113299558	7mer-m8	113299551	113299575	143	-10.39
CAediting_1229415	chr17_67471547_+	ENSG00000089060.10	ENST00000550672	hsa-miR-548aa	113299552	113299558	7mer-m8	113299551	113299575	143	-10.39
CAediting_1368054	chr19_46709310_-	ENSG00000089060.10	ENST00000550672	hsa-miR-320e	113299875	113299882	8mer-1a	113299875	113299892	141	-14.8
CAediting_1229415	chr17_67471547_+	ENSG00000089060.10	ENST00000550047	hsa-miR-548aa	113299552	113299558	7mer-m8	113299551	113299575	143	-10.39
CAediting_1229415	chr17_67471547_+	ENSG00000089060.10	ENST00000549069	hsa-miR-548aa	113299552	113299558	7mer-m8	113299551	113299575	143	-10.39
CAediting_468389	chr6_31355314_-	ENSG00000089060.10	ENST00000550672	hsa-miR-6891-5p	113299812	113299819	8mer-1a	113299812	113299830	155	-26.14
CAediting_468389	chr6_31355314_-	ENSG00000089060.10	ENST00000549605	hsa-miR-6891-5p	113321217	113321223	7mer-m8	113321216	113321237	151	-26.91
CAediting_468389	chr6_31355314_-	ENSG00000089060.10	ENST00000552613	hsa-miR-6891-5p	113321217	113321223	7mer-m8	113321216	113321237	151	-26.91

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000089060.10	ENST00000550672	hsa-miR-605-3p	113298904	113298910	7mer-m8	113298903	113298924	149	-17.55

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SLC8B1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SLC8B1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for SLC8B1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for SLC8B1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_930159	chr12_113311824_-	0.00845925989895135	0.0104128	16.3074

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RelatedDrugs for SLC8B1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SLC8B1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene