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Editing gene: DHDDS (CAeditome ID:79947)

Gene summary for DHDDS

Gene summary

Gene information	Gene symbol	DHDDS
	Gene ID	79947
	Gene name	dehydrodolichyl diphosphate synthase subunit
	Synonyms	CIT\|CPT\|DEDSM\|DS\|HDS\|RP59\|hCIT
	Cytomap	1p36.11
	Type of gene	protein-coding
	Description	dehydrodolichyl diphosphate synthase complex subunit DHDDScis-IPTasecis-isoprenyltransferasecis-prenyl transferasecis-prenyltransferase subunit hCITdedol-PP synthasedehydrodolichyl diphosphate syntase complex subunit DHDDSepididymis tissue protein
	Modification date	20210518
	UniProtAcc	Q86SQ9
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
DHDDS	GO:0002094	Dehydrodolichyl diphosphate synthase complex subunit DHDDS	25066056
DHDDS	GO:0045547	Dehydrodolichyl diphosphate synthase complex subunit DHDDS	28842490
DHDDS	GO:0006489	Dehydrodolichyl diphosphate synthase complex subunit DHDDS	28842490
DHDDS	GO:1904423	Dehydrodolichyl diphosphate synthase complex subunit DHDDS	28842490

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RNA A-to-I events for DHDDS

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000117682.15

RNA A-to-I editing events in Cancer.

CAediting_28908(26433545, +), CAediting_28909(26433581, +), CAediting_28910(26433609, +), CAediting_28911(26433791, +), CAediting_28912(26433853, +), CAediting_28913(26433861, +), CAediting_28914(26436278, +), CAediting_28915(26436343, +), CAediting_28916(26436355, +), CAediting_28917(26436393, +), CAediting_28918(26436550, +), CAediting_28919(26436608, +), CAediting_28920(26436942, +), CAediting_28921(26437365, +), CAediting_28922(26437532, +), CAediting_28923(26437711, +), CAediting_28924(26437901, +), CAediting_28925(26437906, +), CAediting_28926(26437920, +), CAediting_28927(26437952, +), CAediting_28928(26438447, +), CAediting_28929(26438470, +), CAediting_28930(26438495, +), CAediting_28931(26438514, +), CAediting_28932(26438522, +), CAediting_28933(26438540, +), CAediting_28934(26438542, +), CAediting_28935(26438573, +), CAediting_28936(26438574, +), CAediting_28937(26438582, +), CAediting_28938(26438650, +), CAediting_28939(26438654, +), CAediting_28940(26438676, +), CAediting_28941(26438691, +), CAediting_28942(26438696, +), CAediting_28943(26438945, +), CAediting_28944(26438954, +), CAediting_28945(26438958, +), CAediting_28946(26438981, +), CAediting_28947(26438986, +), CAediting_28948(26439006, +), CAediting_28949(26439012, +), CAediting_28950(26439031, +), CAediting_28951(26439032, +), CAediting_28952(26439090, +), CAediting_28953(26439205, +), CAediting_28954(26439211, +), CAediting_28955(26439435, +), CAediting_28956(26439446, +), CAediting_28957(26439475, +), CAediting_28958(26439497, +), CAediting_28959(26439502, +), CAediting_28960(26439503, +), CAediting_28961(26439537, +), CAediting_28962(26439885, +), CAediting_28963(26439886, +), CAediting_28964(26439937, +), CAediting_28965(26439938, +), CAediting_28966(26439940, +), CAediting_28967(26439953, +), CAediting_28968(26439963, +), CAediting_28969(26439978, +), CAediting_28970(26439979, +), CAediting_28971(26439981, +), CAediting_28972(26439983, +), CAediting_28973(26439986, +), CAediting_28974(26439987, +), CAediting_28975(26439988, +), CAediting_28976(26440046, +), CAediting_28977(26440049, +), CAediting_28978(26440079, +), CAediting_28979(26440089, +), CAediting_28980(26440105, +), CAediting_28981(26441054, +), CAediting_28982(26441064, +), CAediting_28983(26441185, +), CAediting_28984(26441197, +), CAediting_28985(26441247, +), CAediting_28986(26441298, +), CAediting_28987(26441299, +), CAediting_28988(26441324, +), CAediting_28989(26441328, +), CAediting_28990(26441338, +), CAediting_28991(26441364, +), CAediting_28992(26441365, +), CAediting_28993(26441380, +), CAediting_28994(26441383, +), CAediting_28995(26441397, +), CAediting_28996(26441409, +), CAediting_28997(26441428, +), CAediting_28998(26441434, +), CAediting_28999(26441439, +), CAediting_29000(26441460, +), CAediting_29001(26441468, +), CAediting_29002(26441627, +), CAediting_29003(26441641, +), CAediting_29004(26441663, +), CAediting_29005(26441667, +), CAediting_29006(26441675, +), CAediting_29007(26441680, +), CAediting_29008(26441685, +), CAediting_29009(26441699, +), CAediting_29010(26441708, +), CAediting_29011(26441711, +), CAediting_29012(26441717, +), CAediting_29013(26441718, +), CAediting_29014(26441719, +), CAediting_29015(26441730, +), CAediting_29016(26441734, +), CAediting_29017(26441737, +), CAediting_29018(26441739, +), CAediting_29019(26441741, +), CAediting_29020(26441742, +), CAediting_29021(26441743, +), CAediting_29022(26441744, +), CAediting_29023(26441745, +), CAediting_29024(26441749, +), CAediting_29025(26441753, +), CAediting_29026(26441765, +), CAediting_29027(26441781, +), CAediting_29028(26441785, +), CAediting_29029(26441802, +), CAediting_29030(26441808, +), CAediting_29031(26441811, +), CAediting_29032(26441821, +), CAediting_29033(26441824, +), CAediting_29034(26441845, +), CAediting_29035(26441846, +), CAediting_29036(26441848, +), CAediting_29037(26441853, +), CAediting_29038(26441856, +), CAediting_29039(26441861, +), CAediting_29040(26441866, +), CAediting_29041(26441876, +), CAediting_29042(26441883, +), CAediting_29043(26441884, +), CAediting_29044(26441886, +), CAediting_29045(26447118, +), CAediting_29046(26447725, +), CAediting_29047(26447733, +), CAediting_29048(26447734, +), CAediting_29049(26447739, +), CAediting_29050(26447742, +), CAediting_29051(26447783, +), CAediting_29052(26447791, +), CAediting_29053(26447792, +), CAediting_29054(26447797, +), CAediting_29055(26447807, +), CAediting_29056(26447809, +), CAediting_29057(26448221, +), CAediting_29058(26448222, +), CAediting_29059(26448254, +), CAediting_29060(26448260, +), CAediting_29061(26448267, +), CAediting_29062(26448273, +), CAediting_29063(26448274, +), CAediting_29064(26448291, +), CAediting_29065(26448299, +), CAediting_29066(26448303, +), CAediting_29067(26448354, +), CAediting_29068(26448363, +), CAediting_29069(26448373, +), CAediting_29070(26448375, +), CAediting_29071(26448382, +), CAediting_29072(26448394, +), CAediting_29073(26448395, +), CAediting_29074(26448431, +), CAediting_29075(26448433, +), CAediting_29076(26448445, +), CAediting_29077(26448447, +), CAediting_29078(26448454, +), CAediting_29079(26448458, +), CAediting_29080(26448467, +), CAediting_29081(26449224, +), CAediting_29082(26449228, +), CAediting_29083(26449298, +), CAediting_29084(26449353, +), CAediting_29085(26449363, +), CAediting_29086(26449742, +), CAediting_29087(26449797, +), CAediting_29088(26450269, +), CAediting_29089(26450276, +), CAediting_29090(26450284, +), CAediting_29091(26450333, +), CAediting_29092(26450408, +), CAediting_29093(26450409, +), CAediting_29094(26450410, +), CAediting_29095(26451517, +), CAediting_29096(26451526, +), CAediting_29097(26451556, +), CAediting_29098(26451559, +), CAediting_29099(26452130, +), CAediting_29100(26452146, +), CAediting_29101(26452817, +), CAediting_29102(26452843, +), CAediting_29103(26452844, +), CAediting_29104(26452849, +), CAediting_29105(26452866, +), CAediting_29106(26452874, +), CAediting_29107(26452875, +), CAediting_29108(26452912, +), CAediting_29109(26452913, +), CAediting_29110(26452920, +), CAediting_29111(26452921, +), CAediting_29112(26452942, +), CAediting_29113(26452943, +), CAediting_29114(26452951, +), CAediting_29115(26452971, +), CAediting_29116(26452977, +), CAediting_29117(26453007, +), CAediting_29118(26453012, +), CAediting_29119(26453017, +), CAediting_29120(26453033, +), CAediting_29121(26453502, +), CAediting_29122(26453509, +), CAediting_29123(26453514, +), CAediting_29124(26453601, +), CAediting_29125(26453627, +), CAediting_29126(26453631, +), CAediting_29127(26453674, +), CAediting_29128(26453679, +), CAediting_29129(26453709, +), CAediting_29130(26454160, +), CAediting_29131(26455662, +), CAediting_29132(26456245, +), CAediting_29133(26456292, +), CAediting_29134(26456519, +), CAediting_29135(26457182, +), CAediting_29136(26457203, +), CAediting_29137(26457204, +), CAediting_29138(26457249, +), CAediting_29139(26457273, +), CAediting_29140(26457275, +), CAediting_29141(26457282, +), CAediting_29142(26457352, +), CAediting_29143(26457358, +), CAediting_29144(26457435, +), CAediting_29145(26458547, +), CAediting_29146(26458576, +), CAediting_29147(26458607, +), CAediting_29148(26458631, +), CAediting_29149(26458653, +),

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RNA editing positional annotations for DHDDS using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_29046	chr1_26447725_+	nonsynonymous SNV	ENST00000374185.6	c.A607G	p.T203A	D	.	N
CAediting_29048	chr1_26447734_+	nonsynonymous SNV	ENST00000374185.6	c.A616G	p.I206V	D	.	N
CAediting_29072	chr1_26448394_+	nonsynonymous SNV	ENST00000427245.5	c.A581G	p.E194G	D	.	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_28908	chr1_26433545_+	ncRNA_intronic
CAediting_28909	chr1_26433581_+	ncRNA_intronic
CAediting_28910	chr1_26433609_+	ncRNA_intronic
CAediting_28911	chr1_26433791_+	ncRNA_intronic
CAediting_28912	chr1_26433853_+	ncRNA_intronic
CAediting_28913	chr1_26433861_+	ncRNA_intronic
CAediting_28914	chr1_26436278_+	ncRNA_intronic
CAediting_28915	chr1_26436343_+	ncRNA_intronic
CAediting_28916	chr1_26436355_+	ncRNA_intronic
CAediting_28917	chr1_26436393_+	ncRNA_intronic
CAediting_28918	chr1_26436550_+	ncRNA_intronic
CAediting_28919	chr1_26436608_+	ncRNA_intronic
CAediting_28920	chr1_26436942_+	ncRNA_intronic
CAediting_28921	chr1_26437365_+	ncRNA_intronic
CAediting_28922	chr1_26437532_+	ncRNA_intronic
CAediting_28923	chr1_26437711_+	ncRNA_intronic
CAediting_28924	chr1_26437901_+	ncRNA_intronic
CAediting_28925	chr1_26437906_+	ncRNA_intronic
CAediting_28926	chr1_26437920_+	ncRNA_intronic
CAediting_28927	chr1_26437952_+	ncRNA_intronic
CAediting_28928	chr1_26438447_+	ncRNA_exonic
CAediting_28929	chr1_26438470_+	ncRNA_exonic
CAediting_28930	chr1_26438495_+	ncRNA_exonic
CAediting_28931	chr1_26438514_+	ncRNA_exonic
CAediting_28932	chr1_26438522_+	ncRNA_exonic
CAediting_28933	chr1_26438540_+	ncRNA_exonic
CAediting_28934	chr1_26438542_+	ncRNA_exonic
CAediting_28935	chr1_26438573_+	ncRNA_exonic
CAediting_28936	chr1_26438574_+	ncRNA_exonic
CAediting_28937	chr1_26438582_+	ncRNA_exonic
CAediting_28938	chr1_26438650_+	ncRNA_exonic
CAediting_28939	chr1_26438654_+	ncRNA_exonic
CAediting_28940	chr1_26438676_+	ncRNA_exonic
CAediting_28941	chr1_26438691_+	ncRNA_exonic
CAediting_28942	chr1_26438696_+	ncRNA_exonic
CAediting_28943	chr1_26438945_+	ncRNA_intronic
CAediting_28944	chr1_26438954_+	ncRNA_intronic
CAediting_28945	chr1_26438958_+	ncRNA_intronic
CAediting_28946	chr1_26438981_+	ncRNA_intronic
CAediting_28947	chr1_26438986_+	ncRNA_intronic
CAediting_28948	chr1_26439006_+	ncRNA_intronic
CAediting_28949	chr1_26439012_+	ncRNA_intronic
CAediting_28950	chr1_26439031_+	ncRNA_intronic
CAediting_28951	chr1_26439032_+	ncRNA_intronic
CAediting_28952	chr1_26439090_+	ncRNA_intronic
CAediting_28953	chr1_26439205_+	ncRNA_intronic
CAediting_28954	chr1_26439211_+	ncRNA_intronic
CAediting_28955	chr1_26439435_+	ncRNA_intronic
CAediting_28956	chr1_26439446_+	ncRNA_intronic
CAediting_28957	chr1_26439475_+	ncRNA_intronic
CAediting_28958	chr1_26439497_+	ncRNA_intronic
CAediting_28959	chr1_26439502_+	ncRNA_intronic
CAediting_28960	chr1_26439503_+	ncRNA_intronic
CAediting_28961	chr1_26439537_+	ncRNA_intronic
CAediting_28962	chr1_26439885_+	ncRNA_intronic
CAediting_28963	chr1_26439886_+	ncRNA_intronic
CAediting_28964	chr1_26439937_+	ncRNA_intronic
CAediting_28965	chr1_26439938_+	ncRNA_intronic
CAediting_28966	chr1_26439940_+	ncRNA_intronic
CAediting_28967	chr1_26439953_+	ncRNA_intronic
CAediting_28968	chr1_26439963_+	ncRNA_intronic
CAediting_28969	chr1_26439978_+	ncRNA_intronic
CAediting_28970	chr1_26439979_+	ncRNA_intronic
CAediting_28971	chr1_26439981_+	ncRNA_intronic
CAediting_28972	chr1_26439983_+	ncRNA_intronic
CAediting_28973	chr1_26439986_+	ncRNA_intronic
CAediting_28974	chr1_26439987_+	ncRNA_intronic
CAediting_28975	chr1_26439988_+	ncRNA_intronic
CAediting_28976	chr1_26440046_+	ncRNA_intronic
CAediting_28977	chr1_26440049_+	ncRNA_intronic
CAediting_28978	chr1_26440079_+	ncRNA_intronic
CAediting_28979	chr1_26440089_+	ncRNA_intronic
CAediting_28980	chr1_26440105_+	ncRNA_intronic
CAediting_28981	chr1_26441054_+	ncRNA_intronic
CAediting_28982	chr1_26441064_+	ncRNA_intronic
CAediting_28983	chr1_26441185_+	ncRNA_intronic
CAediting_28984	chr1_26441197_+	ncRNA_intronic
CAediting_28985	chr1_26441247_+	ncRNA_intronic
CAediting_28986	chr1_26441298_+	ncRNA_intronic
CAediting_28987	chr1_26441299_+	ncRNA_intronic
CAediting_28988	chr1_26441324_+	ncRNA_intronic
CAediting_28989	chr1_26441328_+	ncRNA_intronic
CAediting_28990	chr1_26441338_+	ncRNA_intronic
CAediting_28991	chr1_26441364_+	ncRNA_intronic
CAediting_28992	chr1_26441365_+	ncRNA_intronic
CAediting_28993	chr1_26441380_+	ncRNA_intronic
CAediting_28994	chr1_26441383_+	ncRNA_intronic
CAediting_28995	chr1_26441397_+	ncRNA_intronic
CAediting_28996	chr1_26441409_+	ncRNA_intronic
CAediting_28997	chr1_26441428_+	ncRNA_intronic
CAediting_28998	chr1_26441434_+	ncRNA_intronic
CAediting_28999	chr1_26441439_+	ncRNA_intronic
CAediting_29000	chr1_26441460_+	ncRNA_intronic
CAediting_29001	chr1_26441468_+	ncRNA_intronic
CAediting_29002	chr1_26441627_+	ncRNA_intronic
CAediting_29003	chr1_26441641_+	ncRNA_intronic
CAediting_29004	chr1_26441663_+	ncRNA_intronic
CAediting_29005	chr1_26441667_+	ncRNA_intronic
CAediting_29006	chr1_26441675_+	ncRNA_intronic
CAediting_29007	chr1_26441680_+	ncRNA_intronic
CAediting_29008	chr1_26441685_+	ncRNA_intronic
CAediting_29009	chr1_26441699_+	ncRNA_intronic
CAediting_29010	chr1_26441708_+	ncRNA_intronic
CAediting_29011	chr1_26441711_+	ncRNA_intronic
CAediting_29012	chr1_26441717_+	ncRNA_intronic
CAediting_29013	chr1_26441718_+	ncRNA_intronic
CAediting_29014	chr1_26441719_+	ncRNA_intronic
CAediting_29015	chr1_26441730_+	ncRNA_intronic
CAediting_29016	chr1_26441734_+	ncRNA_intronic
CAediting_29017	chr1_26441737_+	ncRNA_intronic
CAediting_29018	chr1_26441739_+	ncRNA_intronic
CAediting_29019	chr1_26441741_+	ncRNA_intronic
CAediting_29020	chr1_26441742_+	ncRNA_intronic
CAediting_29021	chr1_26441743_+	ncRNA_intronic
CAediting_29022	chr1_26441744_+	ncRNA_intronic
CAediting_29023	chr1_26441745_+	ncRNA_intronic
CAediting_29024	chr1_26441749_+	ncRNA_intronic
CAediting_29025	chr1_26441753_+	ncRNA_intronic
CAediting_29026	chr1_26441765_+	ncRNA_intronic
CAediting_29027	chr1_26441781_+	ncRNA_intronic
CAediting_29028	chr1_26441785_+	ncRNA_intronic
CAediting_29029	chr1_26441802_+	ncRNA_intronic
CAediting_29030	chr1_26441808_+	ncRNA_intronic
CAediting_29031	chr1_26441811_+	ncRNA_intronic
CAediting_29032	chr1_26441821_+	ncRNA_intronic
CAediting_29033	chr1_26441824_+	ncRNA_intronic
CAediting_29034	chr1_26441845_+	ncRNA_intronic
CAediting_29035	chr1_26441846_+	ncRNA_intronic
CAediting_29036	chr1_26441848_+	ncRNA_intronic
CAediting_29037	chr1_26441853_+	ncRNA_intronic
CAediting_29038	chr1_26441856_+	ncRNA_intronic
CAediting_29039	chr1_26441861_+	ncRNA_intronic
CAediting_29040	chr1_26441866_+	ncRNA_intronic
CAediting_29041	chr1_26441876_+	ncRNA_intronic
CAediting_29042	chr1_26441883_+	ncRNA_intronic
CAediting_29043	chr1_26441884_+	ncRNA_intronic
CAediting_29044	chr1_26441886_+	ncRNA_intronic
CAediting_29045	chr1_26447118_+	intronic
CAediting_29046	chr1_26447725_+	exonic
CAediting_29047	chr1_26447733_+	exonic
CAediting_29048	chr1_26447734_+	exonic
CAediting_29049	chr1_26447739_+	exonic
CAediting_29050	chr1_26447742_+	exonic
CAediting_29051	chr1_26447783_+	UTR3
CAediting_29052	chr1_26447791_+	UTR3
CAediting_29053	chr1_26447792_+	UTR3
CAediting_29054	chr1_26447797_+	UTR3
CAediting_29055	chr1_26447807_+	UTR3
CAediting_29056	chr1_26447809_+	UTR3
CAediting_29057	chr1_26448221_+	intronic
CAediting_29058	chr1_26448222_+	intronic
CAediting_29059	chr1_26448254_+	intronic
CAediting_29060	chr1_26448260_+	intronic
CAediting_29061	chr1_26448267_+	intronic
CAediting_29062	chr1_26448273_+	intronic
CAediting_29063	chr1_26448274_+	intronic
CAediting_29064	chr1_26448291_+	intronic
CAediting_29065	chr1_26448299_+	intronic
CAediting_29066	chr1_26448303_+	intronic
CAediting_29067	chr1_26448354_+	splicing
CAediting_29068	chr1_26448363_+	exonic
CAediting_29069	chr1_26448373_+	exonic
CAediting_29070	chr1_26448375_+	exonic
CAediting_29071	chr1_26448382_+	exonic
CAediting_29072	chr1_26448394_+	exonic
CAediting_29073	chr1_26448395_+	exonic
CAediting_29074	chr1_26448431_+	UTR3
CAediting_29075	chr1_26448433_+	UTR3
CAediting_29076	chr1_26448445_+	UTR3
CAediting_29077	chr1_26448447_+	UTR3
CAediting_29078	chr1_26448454_+	UTR3
CAediting_29079	chr1_26448458_+	UTR3
CAediting_29080	chr1_26448467_+	UTR3
CAediting_29081	chr1_26449224_+	intronic
CAediting_29082	chr1_26449228_+	intronic
CAediting_29083	chr1_26449298_+	intronic
CAediting_29084	chr1_26449353_+	intronic
CAediting_29085	chr1_26449363_+	intronic
CAediting_29086	chr1_26449742_+	intronic
CAediting_29087	chr1_26449797_+	intronic
CAediting_29088	chr1_26450269_+	intronic
CAediting_29089	chr1_26450276_+	intronic
CAediting_29090	chr1_26450284_+	intronic
CAediting_29091	chr1_26450333_+	intronic
CAediting_29092	chr1_26450408_+	intronic
CAediting_29093	chr1_26450409_+	intronic
CAediting_29094	chr1_26450410_+	intronic
CAediting_29095	chr1_26451517_+	intronic
CAediting_29096	chr1_26451526_+	intronic
CAediting_29097	chr1_26451556_+	intronic
CAediting_29098	chr1_26451559_+	intronic
CAediting_29099	chr1_26452130_+	intronic
CAediting_29100	chr1_26452146_+	intronic
CAediting_29101	chr1_26452817_+	intronic
CAediting_29102	chr1_26452843_+	intronic
CAediting_29103	chr1_26452844_+	intronic
CAediting_29104	chr1_26452849_+	intronic
CAediting_29105	chr1_26452866_+	intronic
CAediting_29106	chr1_26452874_+	intronic
CAediting_29107	chr1_26452875_+	intronic
CAediting_29108	chr1_26452912_+	intronic
CAediting_29109	chr1_26452913_+	intronic
CAediting_29110	chr1_26452920_+	intronic
CAediting_29111	chr1_26452921_+	intronic
CAediting_29112	chr1_26452942_+	intronic
CAediting_29113	chr1_26452943_+	intronic
CAediting_29114	chr1_26452951_+	intronic
CAediting_29115	chr1_26452971_+	intronic
CAediting_29116	chr1_26452977_+	intronic
CAediting_29117	chr1_26453007_+	intronic
CAediting_29118	chr1_26453012_+	intronic
CAediting_29119	chr1_26453017_+	intronic
CAediting_29120	chr1_26453033_+	intronic
CAediting_29121	chr1_26453502_+	intronic
CAediting_29122	chr1_26453509_+	intronic
CAediting_29123	chr1_26453514_+	intronic
CAediting_29124	chr1_26453601_+	intronic
CAediting_29125	chr1_26453627_+	intronic
CAediting_29126	chr1_26453631_+	intronic
CAediting_29127	chr1_26453674_+	intronic
CAediting_29128	chr1_26453679_+	intronic
CAediting_29129	chr1_26453709_+	intronic
CAediting_29130	chr1_26454160_+	intronic
CAediting_29131	chr1_26455662_+	intronic
CAediting_29132	chr1_26456245_+	intronic
CAediting_29133	chr1_26456292_+	intronic
CAediting_29134	chr1_26456519_+	intronic
CAediting_29135	chr1_26457182_+	intronic
CAediting_29136	chr1_26457203_+	intronic
CAediting_29137	chr1_26457204_+	intronic
CAediting_29138	chr1_26457249_+	intronic
CAediting_29139	chr1_26457273_+	intronic
CAediting_29140	chr1_26457275_+	intronic
CAediting_29141	chr1_26457282_+	intronic
CAediting_29142	chr1_26457352_+	intronic
CAediting_29143	chr1_26457358_+	intronic
CAediting_29144	chr1_26457435_+	intronic
CAediting_29145	chr1_26458547_+	intronic
CAediting_29146	chr1_26458576_+	intronic
CAediting_29147	chr1_26458607_+	intronic
CAediting_29148	chr1_26458631_+	intronic
CAediting_29149	chr1_26458653_+	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_28908	chr1_26433545_+	SINE	Alu	AluJo
CAediting_28909	chr1_26433581_+	SINE	Alu	AluJo
CAediting_28910	chr1_26433609_+	SINE	Alu	AluJo
CAediting_28911	chr1_26433791_+	SINE	Alu	AluSx
CAediting_28912	chr1_26433853_+	SINE	Alu	AluSx
CAediting_28913	chr1_26433861_+	SINE	Alu	AluSx
CAediting_28914	chr1_26436278_+	SINE	Alu	AluJb
CAediting_28915	chr1_26436343_+	SINE	Alu	AluJb
CAediting_28916	chr1_26436355_+	SINE	Alu	AluJb
CAediting_28917	chr1_26436393_+	SINE	Alu	AluJb
CAediting_28918	chr1_26436550_+	SINE	Alu	AluY
CAediting_28919	chr1_26436608_+	SINE	Alu	AluY
CAediting_28920	chr1_26436942_+	SINE	Alu	AluY
CAediting_28921	chr1_26437365_+	SINE	Alu	AluJo
CAediting_28922	chr1_26437532_+	SINE	Alu	AluSz
CAediting_28923	chr1_26437711_+	SINE	Alu	AluSz
CAediting_28924	chr1_26437901_+	SINE	Alu	AluJo
CAediting_28925	chr1_26437906_+	SINE	Alu	AluJo
CAediting_28926	chr1_26437920_+	SINE	Alu	AluJo
CAediting_28927	chr1_26437952_+	SINE	Alu	AluJo
CAediting_28928	chr1_26438447_+	SINE	Alu	AluJr
CAediting_28929	chr1_26438470_+	SINE	Alu	AluJr
CAediting_28930	chr1_26438495_+	SINE	Alu	AluJr
CAediting_28931	chr1_26438514_+	SINE	Alu	AluJr
CAediting_28932	chr1_26438522_+	SINE	Alu	AluJr
CAediting_28933	chr1_26438540_+	SINE	Alu	AluJr
CAediting_28934	chr1_26438542_+	SINE	Alu	AluJr
CAediting_28935	chr1_26438573_+	SINE	Alu	AluJr
CAediting_28936	chr1_26438574_+	SINE	Alu	AluJr
CAediting_28937	chr1_26438582_+	SINE	Alu	AluJr
CAediting_28938	chr1_26438650_+	SINE	Alu	AluJr
CAediting_28939	chr1_26438654_+	SINE	Alu	AluJr
CAediting_28940	chr1_26438676_+	SINE	Alu	AluJr
CAediting_28941	chr1_26438691_+	SINE	Alu	AluJr
CAediting_28942	chr1_26438696_+	SINE	Alu	AluJr
CAediting_28943	chr1_26438945_+	SINE	Alu	AluSx1
CAediting_28944	chr1_26438954_+	SINE	Alu	AluSx1
CAediting_28945	chr1_26438958_+	SINE	Alu	AluSx1
CAediting_28946	chr1_26438981_+	SINE	Alu	AluSx1
CAediting_28947	chr1_26438986_+	SINE	Alu	AluSx1
CAediting_28948	chr1_26439006_+	SINE	Alu	AluSx1
CAediting_28949	chr1_26439012_+	SINE	Alu	AluSx1
CAediting_28950	chr1_26439031_+	SINE	Alu	AluSx1
CAediting_28951	chr1_26439032_+	SINE	Alu	AluSx1
CAediting_28952	chr1_26439090_+	SINE	Alu	AluSx1
CAediting_28953	chr1_26439205_+	SINE	Alu	AluSx1
CAediting_28954	chr1_26439211_+	SINE	Alu	AluSx1
CAediting_28955	chr1_26439435_+	SINE	Alu	AluJb
CAediting_28956	chr1_26439446_+	SINE	Alu	AluJb
CAediting_28957	chr1_26439475_+	SINE	Alu	AluJb
CAediting_28958	chr1_26439497_+	SINE	Alu	AluJb
CAediting_28959	chr1_26439502_+	SINE	Alu	AluJb
CAediting_28960	chr1_26439503_+	SINE	Alu	AluJb
CAediting_28961	chr1_26439537_+	SINE	Alu	AluJb
CAediting_28962	chr1_26439885_+	SINE	Alu	AluY
CAediting_28963	chr1_26439886_+	SINE	Alu	AluY
CAediting_28964	chr1_26439937_+	SINE	Alu	AluY
CAediting_28965	chr1_26439938_+	SINE	Alu	AluY
CAediting_28966	chr1_26439940_+	SINE	Alu	AluY
CAediting_28967	chr1_26439953_+	SINE	Alu	AluY
CAediting_28968	chr1_26439963_+	SINE	Alu	AluY
CAediting_28969	chr1_26439978_+	SINE	Alu	AluY
CAediting_28970	chr1_26439979_+	SINE	Alu	AluY
CAediting_28971	chr1_26439981_+	SINE	Alu	AluY
CAediting_28972	chr1_26439983_+	SINE	Alu	AluY
CAediting_28973	chr1_26439986_+	SINE	Alu	AluY
CAediting_28974	chr1_26439987_+	SINE	Alu	AluY
CAediting_28975	chr1_26439988_+	SINE	Alu	AluY
CAediting_28976	chr1_26440046_+	SINE	Alu	AluY
CAediting_28977	chr1_26440049_+	SINE	Alu	AluY
CAediting_28978	chr1_26440079_+	SINE	Alu	AluY
CAediting_28979	chr1_26440089_+	SINE	Alu	AluY
CAediting_28980	chr1_26440105_+	SINE	Alu	AluY
CAediting_28981	chr1_26441054_+	SINE	Alu	AluSg
CAediting_28982	chr1_26441064_+	SINE	Alu	AluSg
CAediting_28983	chr1_26441185_+	SINE	Alu	AluSg
CAediting_28984	chr1_26441197_+	SINE	Alu	AluSg
CAediting_28985	chr1_26441247_+	SINE	Alu	AluSx
CAediting_28986	chr1_26441298_+	SINE	Alu	AluSx
CAediting_28987	chr1_26441299_+	SINE	Alu	AluSx
CAediting_28988	chr1_26441324_+	SINE	Alu	AluSx
CAediting_28989	chr1_26441328_+	SINE	Alu	AluSx
CAediting_28990	chr1_26441338_+	SINE	Alu	AluSx
CAediting_28991	chr1_26441364_+	SINE	Alu	AluSx
CAediting_28992	chr1_26441365_+	SINE	Alu	AluSx
CAediting_28993	chr1_26441380_+	SINE	Alu	AluSx
CAediting_28994	chr1_26441383_+	SINE	Alu	AluSx
CAediting_28995	chr1_26441397_+	SINE	Alu	AluSx
CAediting_28996	chr1_26441409_+	SINE	Alu	AluSx
CAediting_28997	chr1_26441428_+	SINE	Alu	AluSx
CAediting_28998	chr1_26441434_+	SINE	Alu	AluSx
CAediting_28999	chr1_26441439_+	SINE	Alu	AluSx
CAediting_29000	chr1_26441460_+	SINE	Alu	AluSx
CAediting_29001	chr1_26441468_+	SINE	Alu	AluSx
CAediting_29002	chr1_26441627_+	SINE	Alu	AluSx
CAediting_29003	chr1_26441641_+	SINE	Alu	AluSx
CAediting_29004	chr1_26441663_+	SINE	Alu	AluSx
CAediting_29005	chr1_26441667_+	SINE	Alu	AluSx
CAediting_29006	chr1_26441675_+	SINE	Alu	AluSx
CAediting_29007	chr1_26441680_+	SINE	Alu	AluSx
CAediting_29008	chr1_26441685_+	SINE	Alu	AluSx
CAediting_29009	chr1_26441699_+	SINE	Alu	AluSx
CAediting_29010	chr1_26441708_+	SINE	Alu	AluSx
CAediting_29011	chr1_26441711_+	SINE	Alu	AluSx
CAediting_29012	chr1_26441717_+	SINE	Alu	AluSx
CAediting_29013	chr1_26441718_+	SINE	Alu	AluSx
CAediting_29014	chr1_26441719_+	SINE	Alu	AluSx
CAediting_29015	chr1_26441730_+	SINE	Alu	AluSx
CAediting_29016	chr1_26441734_+	SINE	Alu	AluSx
CAediting_29017	chr1_26441737_+	SINE	Alu	AluSx
CAediting_29018	chr1_26441739_+	SINE	Alu	AluSx
CAediting_29019	chr1_26441741_+	SINE	Alu	AluSx
CAediting_29020	chr1_26441742_+	SINE	Alu	AluSx
CAediting_29021	chr1_26441743_+	SINE	Alu	AluSx
CAediting_29022	chr1_26441744_+	SINE	Alu	AluSx
CAediting_29023	chr1_26441745_+	SINE	Alu	AluSx
CAediting_29024	chr1_26441749_+	SINE	Alu	AluSx
CAediting_29025	chr1_26441753_+	SINE	Alu	AluSx
CAediting_29026	chr1_26441765_+	SINE	Alu	AluSx
CAediting_29027	chr1_26441781_+	SINE	Alu	AluSx
CAediting_29028	chr1_26441785_+	SINE	Alu	AluSx
CAediting_29029	chr1_26441802_+	SINE	Alu	AluSx
CAediting_29030	chr1_26441808_+	SINE	Alu	AluSx
CAediting_29031	chr1_26441811_+	SINE	Alu	AluSx
CAediting_29032	chr1_26441821_+	SINE	Alu	AluSx
CAediting_29033	chr1_26441824_+	SINE	Alu	AluSx
CAediting_29034	chr1_26441845_+	SINE	Alu	AluSx
CAediting_29035	chr1_26441846_+	SINE	Alu	AluSx
CAediting_29036	chr1_26441848_+	SINE	Alu	AluSx
CAediting_29037	chr1_26441853_+	SINE	Alu	AluSx
CAediting_29038	chr1_26441856_+	SINE	Alu	AluSx
CAediting_29039	chr1_26441861_+	SINE	Alu	AluSx
CAediting_29040	chr1_26441866_+	SINE	Alu	AluSx
CAediting_29041	chr1_26441876_+	SINE	Alu	AluSx
CAediting_29042	chr1_26441883_+	SINE	Alu	AluSx
CAediting_29043	chr1_26441884_+	SINE	Alu	AluSx
CAediting_29044	chr1_26441886_+	SINE	Alu	AluSx
CAediting_29045	chr1_26447118_+	SINE	Alu	AluSq2
CAediting_29046	chr1_26447725_+	SINE	Alu	AluSz6
CAediting_29047	chr1_26447733_+	SINE	Alu	AluSz6
CAediting_29048	chr1_26447734_+	SINE	Alu	AluSz6
CAediting_29049	chr1_26447739_+	SINE	Alu	AluSz6
CAediting_29050	chr1_26447742_+	SINE	Alu	AluSz6
CAediting_29051	chr1_26447783_+	SINE	Alu	AluSz6
CAediting_29052	chr1_26447791_+	SINE	Alu	AluSz6
CAediting_29053	chr1_26447792_+	SINE	Alu	AluSz6
CAediting_29054	chr1_26447797_+	SINE	Alu	AluSz6
CAediting_29055	chr1_26447807_+	SINE	Alu	AluSz6
CAediting_29056	chr1_26447809_+	SINE	Alu	AluSz6
CAediting_29057	chr1_26448221_+	SINE	Alu	AluSx4
CAediting_29058	chr1_26448222_+	SINE	Alu	AluSx4
CAediting_29059	chr1_26448254_+	SINE	Alu	AluSx4
CAediting_29060	chr1_26448260_+	SINE	Alu	AluSx4
CAediting_29061	chr1_26448267_+	SINE	Alu	AluSx4
CAediting_29062	chr1_26448273_+	SINE	Alu	AluSx4
CAediting_29063	chr1_26448274_+	SINE	Alu	AluSx4
CAediting_29064	chr1_26448291_+	SINE	Alu	AluSx4
CAediting_29065	chr1_26448299_+	SINE	Alu	AluSx4
CAediting_29066	chr1_26448303_+	SINE	Alu	AluSx4
CAediting_29067	chr1_26448354_+	SINE	Alu	AluSx4
CAediting_29068	chr1_26448363_+	SINE	Alu	AluSx4
CAediting_29069	chr1_26448373_+	SINE	Alu	AluSx4
CAediting_29070	chr1_26448375_+	SINE	Alu	AluSx4
CAediting_29071	chr1_26448382_+	SINE	Alu	AluSx4
CAediting_29072	chr1_26448394_+	SINE	Alu	AluSx4
CAediting_29073	chr1_26448395_+	SINE	Alu	AluSx4
CAediting_29074	chr1_26448431_+	SINE	Alu	AluSx4
CAediting_29075	chr1_26448433_+	SINE	Alu	AluSx4
CAediting_29076	chr1_26448445_+	SINE	Alu	AluSx4
CAediting_29077	chr1_26448447_+	SINE	Alu	AluSx4
CAediting_29078	chr1_26448454_+	SINE	Alu	AluSx4
CAediting_29079	chr1_26448458_+	SINE	Alu	AluSx4
CAediting_29080	chr1_26448467_+	SINE	Alu	AluSx4
CAediting_29081	chr1_26449224_+	SINE	Alu	AluSx1
CAediting_29082	chr1_26449228_+	SINE	Alu	AluSx1
CAediting_29083	chr1_26449298_+	SINE	Alu	AluSx1
CAediting_29084	chr1_26449353_+	SINE	Alu	AluSx1
CAediting_29085	chr1_26449363_+	SINE	Alu	AluSx1
CAediting_29086	chr1_26449742_+	SINE	Alu	AluSx
CAediting_29087	chr1_26449797_+	SINE	Alu	AluSx
CAediting_29088	chr1_26450269_+	SINE	Alu	AluJr
CAediting_29089	chr1_26450276_+	SINE	Alu	AluJr
CAediting_29090	chr1_26450284_+	SINE	Alu	AluJr
CAediting_29091	chr1_26450333_+	SINE	Alu	AluJr
CAediting_29092	chr1_26450408_+	SINE	Alu	AluJr
CAediting_29093	chr1_26450409_+	SINE	Alu	AluJr
CAediting_29094	chr1_26450410_+	SINE	Alu	AluJr
CAediting_29095	chr1_26451517_+	SINE	Alu	AluSz
CAediting_29096	chr1_26451526_+	SINE	Alu	AluSz
CAediting_29097	chr1_26451556_+	SINE	Alu	AluSz
CAediting_29098	chr1_26451559_+	SINE	Alu	AluSz
CAediting_29099	chr1_26452130_+	SINE	Alu	AluJb
CAediting_29100	chr1_26452146_+	SINE	Alu	AluJb
CAediting_29102	chr1_26452843_+	SINE	Alu	AluJo
CAediting_29103	chr1_26452844_+	SINE	Alu	AluJo
CAediting_29104	chr1_26452849_+	SINE	Alu	AluJo
CAediting_29105	chr1_26452866_+	SINE	Alu	AluJo
CAediting_29106	chr1_26452874_+	SINE	Alu	AluJo
CAediting_29107	chr1_26452875_+	SINE	Alu	AluJo
CAediting_29108	chr1_26452912_+	SINE	Alu	AluJo
CAediting_29109	chr1_26452913_+	SINE	Alu	AluJo
CAediting_29110	chr1_26452920_+	SINE	Alu	AluJo
CAediting_29111	chr1_26452921_+	SINE	Alu	AluJo
CAediting_29112	chr1_26452942_+	SINE	Alu	AluJo
CAediting_29113	chr1_26452943_+	SINE	Alu	AluJo
CAediting_29114	chr1_26452951_+	SINE	Alu	AluJo
CAediting_29115	chr1_26452971_+	SINE	Alu	AluJo
CAediting_29116	chr1_26452977_+	SINE	Alu	AluJo
CAediting_29117	chr1_26453007_+	SINE	Alu	AluJo
CAediting_29118	chr1_26453012_+	SINE	Alu	AluJo
CAediting_29119	chr1_26453017_+	SINE	Alu	AluJo
CAediting_29120	chr1_26453033_+	SINE	Alu	AluJo
CAediting_29121	chr1_26453502_+	SINE	Alu	AluJb
CAediting_29122	chr1_26453509_+	SINE	Alu	AluJb
CAediting_29123	chr1_26453514_+	SINE	Alu	AluJb
CAediting_29124	chr1_26453601_+	SINE	Alu	AluJb
CAediting_29125	chr1_26453627_+	SINE	Alu	AluJb
CAediting_29126	chr1_26453631_+	SINE	Alu	AluJb
CAediting_29127	chr1_26453674_+	SINE	Alu	AluJb
CAediting_29128	chr1_26453679_+	SINE	Alu	AluJb
CAediting_29129	chr1_26453709_+	SINE	Alu	AluJb
CAediting_29130	chr1_26454160_+	SINE	Alu	AluY
CAediting_29131	chr1_26455662_+	SINE	Alu	AluSx1
CAediting_29132	chr1_26456245_+	SINE	Alu	AluJb
CAediting_29133	chr1_26456292_+	SINE	Alu	AluJb
CAediting_29134	chr1_26456519_+	SINE	Alu	AluSx
CAediting_29135	chr1_26457182_+	SINE	Alu	AluY
CAediting_29136	chr1_26457203_+	SINE	Alu	AluY
CAediting_29137	chr1_26457204_+	SINE	Alu	AluY
CAediting_29138	chr1_26457249_+	SINE	Alu	AluY
CAediting_29139	chr1_26457273_+	SINE	Alu	AluY
CAediting_29140	chr1_26457275_+	SINE	Alu	AluY
CAediting_29141	chr1_26457282_+	SINE	Alu	AluY
CAediting_29142	chr1_26457352_+	SINE	Alu	AluY
CAediting_29143	chr1_26457358_+	SINE	Alu	AluY
CAediting_29144	chr1_26457435_+	SINE	Alu	AluY
CAediting_29145	chr1_26458547_+	SINE	Alu	AluSx1
CAediting_29146	chr1_26458576_+	SINE	Alu	AluSx1
CAediting_29147	chr1_26458607_+	SINE	Alu	AluSx1
CAediting_29148	chr1_26458631_+	SINE	Alu	AluSx1
CAediting_29149	chr1_26458653_+	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for DHDDS

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000117682.15.DHDDS.

Correlation between RNA A-to-I editing and PSI for ENSG00000117682.15.DHDDS.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for DHDDS

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for DHDDS

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for DHDDS

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-12121	26447807	26447814	8mer-1a	26447795	26447814	149.00	-21.23
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-1306-3p	26447802	26447808	7mer-m8	26447792	26447809	152.00	-23.71
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-6771-5p	26448425	26448432	8mer-1a	26448413	26448432	160.00	-30.71
CAediting_29075	chr1_26448433_+	ENSG00000117682.15	ENST00000427245	hsa-miR-3189-3p	26448427	26448433	7mer-m8	26448415	26448434	149.00	-25.49
CAediting_29075	chr1_26448433_+	ENSG00000117682.15	ENST00000427245	hsa-miR-6813-3p	26448428	26448434	7mer-m8	26448415	26448435	140.00	-11.59
CAediting_29076	chr1_26448445_+	ENSG00000117682.15	ENST00000427245	hsa-miR-106a-3p	26448441	26448446	6mer	26448426	26448447	141.00	-21.13
CAediting_29051	chr1_26447783_+	ENSG00000117682.15	ENST00000374185	hsa-miR-1234-3p	26447776	26447782	7mer-m8	26447761	26447783	143.00	-19.95
CAediting_29051	chr1_26447783_+	ENSG00000117682.15	ENST00000374185	hsa-miR-7107-5p	26447776	26447782	7mer-m8	26447761	26447783	145.00	-24.09
CAediting_29053	chr1_26447792_+	ENSG00000117682.15	ENST00000374185	hsa-miR-1200	26447788	26447793	6mer	26447776	26447794	143.00	-23.39
CAediting_29053	chr1_26447792_+	ENSG00000117682.15	ENST00000374185	hsa-miR-12113	26447785	26447791	7mer-m8	26447771	26447792	148.00	-17.97
CAediting_29053	chr1_26447792_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4539	26447785	26447791	7mer-m8	26447773	26447792	148.00	-18.00
CAediting_29055	chr1_26447807_+	ENSG00000117682.15	ENST00000374185	hsa-miR-3190-5p	26447800	26447806	7mer-m8	26447788	26447807	152.00	-19.64
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-1180-5p	26448450	26448457	8mer-1a	26448440	26448457	147.00	-18.39
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-662	26448449	26448454	6mer	26448433	26448455	153.00	-33.12
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-7114-3p	26448450	26448457	8mer-1a	26448437	26448457	155.00	-22.90
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-7973	26448452	26448458	7mer-m8	26448438	26448459	141.00	-13.45
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-7973	26448452	26448458	7mer-m8	26448438	26448459	141.00	-13.45
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-4665-3p	26448465	26448471	7mer-m8	26448447	26448472	157.00	-30.03

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-1285-3p	26448461	26448467	7mer-m8	26448447	26448468	140	-15.97
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-1285-3p	26448461	26448467	7mer-m8	26448447	26448468	140	-15.97
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-30b-3p	26448424	26448431	8mer-1a	26448410	26448431	151	-15.38
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-3187-5p	26448461	26448467	7mer-m8	26448448	26448468	152	-21.98
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-3689a-3p	26448424	26448431	8mer-1a	26448411	26448431	147	-19.23
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-3689b-3p	26448424	26448431	8mer-1a	26448411	26448431	147	-18.06
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-3689c	26448424	26448431	8mer-1a	26448411	26448431	147	-18.06
CAediting_29078	chr1_26448454_+	ENSG00000117682.15	ENST00000427245	hsa-miR-4798-3p	26448449	26448455	7mer-m8	26448434	26448456	146	-17.84
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-5189-5p	26448461	26448467	7mer-m8	26448446	26448468	143	-20.05
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-5787	26448463	26448469	7mer-m8	26448452	26448470	151	-20.65
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-612	26448461	26448467	7mer-m8	26448445	26448468	153	-25.83
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-6779-5p	26448424	26448431	8mer-1a	26448413	26448431	148	-23.55
CAediting_29080	chr1_26448467_+	ENSG00000117682.15	ENST00000427245	hsa-miR-6860	26448461	26448467	7mer-m8	26448448	26448468	148	-20.84
CAediting_29074	chr1_26448431_+	ENSG00000117682.15	ENST00000427245	hsa-miR-887-5p	26448425	26448432	8mer-1a	26448413	26448432	143	-15.14
CAediting_29051	chr1_26447783_+	ENSG00000117682.15	ENST00000374185	hsa-miR-3176	26447777	26447783	7mer-m8	26447766	26447784	145	-18.69
CAediting_29054	chr1_26447797_+	ENSG00000117682.15	ENST00000374185	hsa-miR-3663-5p	26447791	26447797	7mer-m8	26447782	26447798	141	-19.69
CAediting_29051	chr1_26447783_+	ENSG00000117682.15	ENST00000374185	hsa-miR-3922-3p	26447777	26447783	7mer-m8	26447764	26447784	152	-16.72
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4659a-5p	26447807	26447814	8mer-1a	26447793	26447814	145	-13.59
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4659b-5p	26447807	26447814	8mer-1a	26447796	26447814	145	-13.85
CAediting_29055	chr1_26447807_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4716-5p	26447805	26447811	7mer-m8	26447791	26447812	140	-10.69
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4716-5p	26447805	26447811	7mer-m8	26447791	26447812	140	-10.69
CAediting_29055	chr1_26447807_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4781-3p	26447803	26447809	7mer-m8	26447792	26447810	144	-13.86
CAediting_29056	chr1_26447809_+	ENSG00000117682.15	ENST00000374185	hsa-miR-4781-3p	26447803	26447809	7mer-m8	26447792	26447810	144	-13.86
CAediting_29054	chr1_26447797_+	ENSG00000117682.15	ENST00000374185	hsa-miR-6131	26447792	26447798	7mer-m8	26447781	26447799	140	-17.94

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000117682.15	ENST00000434391	hsa-miR-200b-3p	26442783	26442789	7mer-m8	26442768	26442790	150	-14.87
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000434391	hsa-miR-605-3p	26469993	26470000	8mer-1a	26469978	26470000	147	-18.6
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000434391	hsa-miR-605-3p	26469159	26469165	7mer-m8	26469145	26469166	141	-16.2
CAediting_980496	chr14_31014685_-	ENSG00000117682.15	ENST00000434391	hsa-miR-624-3p	26470346	26470352	7mer-m8	26470331	26470353	141	-14.78
CAediting_1306324	chr19_13836464_-	ENSG00000117682.15	ENST00000434391	hsa-miR-27a-3p	26468972	26468977	6mer	26468960	26468978	143	-21.89
CAediting_688081	chr9_63819627_+	ENSG00000117682.15	ENST00000434391	hsa-miR-4477b	26470062	26470068	7mer-m8	26470048	26470069	141	-9.74
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000525682	hsa-miR-605-3p	26469159	26469165	7mer-m8	26469145	26469166	141	-16.2
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000526219	hsa-miR-605-3p	26469159	26469165	7mer-m8	26469145	26469166	141	-16.2
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000360009	hsa-miR-605-3p	26469159	26469165	7mer-m8	26469145	26469166	141	-16.2
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000360009	hsa-miR-605-3p	26469993	26470000	8mer-1a	26469978	26470000	147	-18.6
CAediting_980496	chr14_31014685_-	ENSG00000117682.15	ENST00000360009	hsa-miR-624-3p	26470346	26470352	7mer-m8	26470331	26470353	141	-14.78
CAediting_688081	chr9_63819627_+	ENSG00000117682.15	ENST00000360009	hsa-miR-4477b	26470062	26470068	7mer-m8	26470048	26470069	141	-9.74
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000431933	hsa-miR-605-3p	26469159	26469165	7mer-m8	26469145	26469166	141	-16.2
CAediting_748296	chr10_51299626_+	ENSG00000117682.15	ENST00000431933	hsa-miR-605-3p	26469993	26470000	8mer-1a	26469978	26470000	147	-18.6
CAediting_980496	chr14_31014685_-	ENSG00000117682.15	ENST00000431933	hsa-miR-624-3p	26470346	26470352	7mer-m8	26470331	26470353	141	-14.78
CAediting_688081	chr9_63819627_+	ENSG00000117682.15	ENST00000431933	hsa-miR-4477b	26470062	26470068	7mer-m8	26470048	26470069	141	-9.74
CAediting_1368054	chr19_46709310_-	ENSG00000117682.15	ENST00000434391	hsa-miR-320e	26469004	26469010	7mer-m8	26468994	26469011	146	-17.54
CAediting_86358	chr1_109598906_+	ENSG00000117682.15	ENST00000434391	hsa-miR-197-5p	26469522	26469529	8mer-1a	26469506	26469529	158	-31.01
CAediting_228905	chr2_188297554_+	ENSG00000117682.15	ENST00000434391	hsa-miR-561-3p	26470008	26470014	7mer-m8	26469994	26470015	157	-15.98
CAediting_228905	chr2_188297554_+	ENSG00000117682.15	ENST00000434391	hsa-miR-561-3p	26469029	26469035	7mer-m8	26469014	26469036	141	-11.19
CAediting_396018	chr5_1062918_-	ENSG00000117682.15	ENST00000434391	hsa-miR-4635	26471177	26471184	8mer-1a	26471164	26471184	148	-17.66
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000434391	hsa-miR-6840-3p	26470579	26470586	8mer-1a	26470567	26470586	149	-28.3
CAediting_86358	chr1_109598906_+	ENSG00000117682.15	ENST00000360009	hsa-miR-197-5p	26469522	26469529	8mer-1a	26469506	26469529	158	-31.01
CAediting_228905	chr2_188297554_+	ENSG00000117682.15	ENST00000360009	hsa-miR-561-3p	26470008	26470014	7mer-m8	26469994	26470015	157	-15.98
CAediting_396018	chr5_1062918_-	ENSG00000117682.15	ENST00000360009	hsa-miR-4635	26471177	26471184	8mer-1a	26471164	26471184	148	-17.66
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000360009	hsa-miR-6840-3p	26470579	26470586	8mer-1a	26470567	26470586	149	-28.3
CAediting_86358	chr1_109598906_+	ENSG00000117682.15	ENST00000431933	hsa-miR-197-5p	26469522	26469529	8mer-1a	26469506	26469529	158	-31.01
CAediting_228905	chr2_188297554_+	ENSG00000117682.15	ENST00000431933	hsa-miR-561-3p	26470008	26470014	7mer-m8	26469994	26470015	157	-15.98
CAediting_396018	chr5_1062918_-	ENSG00000117682.15	ENST00000431933	hsa-miR-4635	26471177	26471184	8mer-1a	26471164	26471184	148	-17.66
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000431933	hsa-miR-6840-3p	26470579	26470586	8mer-1a	26470567	26470586	149	-28.3
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000434391	hsa-miR-6891-5p	26469815	26469820	6mer	26469807	26469824	154	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000434391	hsa-miR-6891-5p	26469817	26469823	7mer-m8	26469807	26469824	154	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000360009	hsa-miR-6891-5p	26469815	26469820	6mer	26469807	26469824	154	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000360009	hsa-miR-6891-5p	26469817	26469823	7mer-m8	26469807	26469824	154	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000431933	hsa-miR-6891-5p	26469815	26469820	6mer	26469807	26469824	154	-22.21
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000431933	hsa-miR-6891-5p	26469817	26469823	7mer-m8	26469807	26469824	154	-22.21

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000434391	hsa-miR-4512	26469901	26469907	7mer-m8	26469888	26469908	143	-25.21
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000434391	hsa-miR-4512	26470071	26470078	8mer-1a	26470059	26470078	147	-18.64
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000434391	hsa-miR-6840-3p	26470915	26470921	7mer-m8	26470901	26470922	140	-20.83
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000434391	hsa-miR-6891-5p	26469210	26469216	7mer-m8	26469199	26469217	142	-12.56
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000360009	hsa-miR-4512	26469901	26469907	7mer-m8	26469888	26469908	143	-25.21
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000360009	hsa-miR-4512	26470071	26470078	8mer-1a	26470059	26470078	147	-18.64
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000360009	hsa-miR-6840-3p	26470915	26470921	7mer-m8	26470901	26470922	140	-20.83
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000360009	hsa-miR-6891-5p	26469210	26469216	7mer-m8	26469199	26469217	142	-12.56
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000431933	hsa-miR-4512	26469901	26469907	7mer-m8	26469888	26469908	143	-25.21
CAediting_1054808	chr15_66496985_-	ENSG00000117682.15	ENST00000431933	hsa-miR-4512	26470071	26470078	8mer-1a	26470059	26470078	147	-18.64
CAediting_580943	chr7_100356700_+	ENSG00000117682.15	ENST00000431933	hsa-miR-6840-3p	26470915	26470921	7mer-m8	26470901	26470922	140	-20.83
CAediting_468389	chr6_31355314_-	ENSG00000117682.15	ENST00000431933	hsa-miR-6891-5p	26469210	26469216	7mer-m8	26469199	26469217	142	-12.56

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for DHDDS

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000374185.6	protein_coding
ENST00000427245.5	protein_coding
ENST00000487944.4	retained_intron

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_29046	ENST00000374185.6	chr1_26447725_+	-379.50	-380.20	-391.70
CAediting_29047	ENST00000374185.6	chr1_26447733_+	-381.30	-380.20	-391.70
CAediting_29048	ENST00000374185.6	chr1_26447734_+	-380.80	-380.20	-391.70
CAediting_29049	ENST00000374185.6	chr1_26447739_+	-380.20	-380.20	-391.70
CAediting_29050	ENST00000374185.6	chr1_26447742_+	-379.90	-380.20	-391.70
CAediting_29051	ENST00000374185.6	chr1_26447783_+	-379.50	-380.20	-391.70
CAediting_29052	ENST00000374185.6	chr1_26447791_+	-380.20	-380.20	-391.70
CAediting_29053	ENST00000374185.6	chr1_26447792_+	-380.20	-380.20	-391.70
CAediting_29054	ENST00000374185.6	chr1_26447797_+	-380.20	-380.20	-391.70
CAediting_29055	ENST00000374185.6	chr1_26447807_+	-380.00	-380.20	-391.70
CAediting_29056	ENST00000374185.6	chr1_26447809_+	-380.40	-380.20	-391.70
CAediting_29068	ENST00000427245.5	chr1_26448363_+	-294.80	-293.80	-305.20
CAediting_29069	ENST00000427245.5	chr1_26448373_+	-293.40	-293.80	-305.20
CAediting_29070	ENST00000427245.5	chr1_26448375_+	-293.80	-293.80	-305.20
CAediting_29071	ENST00000427245.5	chr1_26448382_+	-293.70	-293.80	-305.20
CAediting_29072	ENST00000427245.5	chr1_26448394_+	-292.90	-293.80	-305.20
CAediting_29073	ENST00000427245.5	chr1_26448395_+	-293.80	-293.80	-305.20
CAediting_29074	ENST00000427245.5	chr1_26448431_+	-294.40	-293.80	-305.20
CAediting_29075	ENST00000427245.5	chr1_26448433_+	-294.00	-293.80	-305.20
CAediting_29076	ENST00000427245.5	chr1_26448445_+	-297.00	-293.80	-305.20
CAediting_29077	ENST00000427245.5	chr1_26448447_+	-296.00	-293.80	-305.20
CAediting_29078	ENST00000427245.5	chr1_26448454_+	-296.30	-293.80	-305.20
CAediting_29079	ENST00000427245.5	chr1_26448458_+	-296.80	-293.80	-305.20
CAediting_29080	ENST00000427245.5	chr1_26448467_+	-293.60	-293.80	-305.20
CAediting_28928	ENST00000487944.4	chr1_26438447_+	-246.60	-247.30	-258.10
CAediting_28929	ENST00000487944.4	chr1_26438470_+	-248.30	-247.30	-258.10
CAediting_28930	ENST00000487944.4	chr1_26438495_+	-247.60	-247.30	-258.10
CAediting_28931	ENST00000487944.4	chr1_26438514_+	-249.90	-247.30	-258.10
CAediting_28932	ENST00000487944.4	chr1_26438522_+	-247.90	-247.30	-258.10
CAediting_28933	ENST00000487944.4	chr1_26438540_+	-250.90	-247.30	-258.10
CAediting_28934	ENST00000487944.4	chr1_26438542_+	-251.60	-247.30	-258.10
CAediting_28935	ENST00000487944.4	chr1_26438573_+	-247.30	-247.30	-258.10
CAediting_28936	ENST00000487944.4	chr1_26438574_+	-251.00	-247.30	-258.10
CAediting_28937	ENST00000487944.4	chr1_26438582_+	-247.30	-247.30	-258.10
CAediting_28938	ENST00000487944.4	chr1_26438650_+	-246.50	-247.30	-258.10
CAediting_28939	ENST00000487944.4	chr1_26438654_+	-247.30	-247.30	-258.10
CAediting_28940	ENST00000487944.4	chr1_26438676_+	-251.30	-247.30	-258.10
CAediting_28941	ENST00000487944.4	chr1_26438691_+	-247.70	-247.30	-258.10
CAediting_28942	ENST00000487944.4	chr1_26438696_+	-247.60	-247.30	-258.10

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Relation with ADAR for DHDDS

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_29047	chr1_26447733_+	0.00125595321970216	0.234798744426458	.	.	.	.
GBM	CAediting_29047	chr1_26447733_+	0.0473195267504244	0.273743782027528	.	.	.	.
PRAD	CAediting_29047	chr1_26447733_+	0.00501142025891182	0.339008103334711	.	.	.	.
ESCA	CAediting_29047	chr1_26447733_+	0.0143769528707657	0.340864263062346	.	.	.	.
SKCM	CAediting_29048	chr1_26447734_+	.	.	0.0148283086266518	0.324066537250804	.	.
BRCA	CAediting_29052	chr1_26447791_+	0.0165028245632368	0.149445917259965	.	.	.	.
SKCM	CAediting_29052	chr1_26447791_+	0.0036113393176253	0.260521764321267	.	.	.	.

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Relation with cancer stages for DHDDS

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for DHDDS

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_29048	chr1_26447734_+	0.00345095259986661	0.00942155	0.000498658

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RelatedDrugs for DHDDS

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for DHDDS

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
DHDDS	C3151227	RETINITIS PIGMENTOSA 59	3	CTD_human;GENOMICS_ENGLAND;UNIPROT
DHDDS	C4693376	DEVELOPMENTAL DELAY AND SEIZURES WITH OR WITHOUT MOVEMENT ABNORMALITIES	2	GENOMICS_ENGLAND;UNIPROT

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene