|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: KIAA0319L (CAeditome ID:79932) |
Gene summary for KIAA0319L |
Gene summary |
Gene information | Gene symbol | KIAA0319L | Gene ID | 79932 |
Gene name | KIAA0319 like | |
Synonyms | AAVR|AAVRL | |
Cytomap | 1p34.3 | |
Type of gene | protein-coding | |
Description | dyslexia-associated protein KIAA0319-like proteinAAV receptor likeadeno-associated virus receptorpolycystic kidney disease 1-related | |
Modification date | 20210518 | |
UniProtAcc | Q8IZA0 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
KIAA0319L | GO:0005730 | Dyslexia-associated protein KIAA0319-like protein | 0000052 |
KIAA0319L | GO:0005794 | Dyslexia-associated protein KIAA0319-like protein | 0000052 |
KIAA0319L | GO:0031410 | Dyslexia-associated protein KIAA0319-like protein | 20697954 |
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RNA A-to-I events for KIAA0319L |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000142687.16 |
RNA A-to-I editing events in Cancer. |
CAediting_43835(35434096, -), CAediting_43836(35434112, -), CAediting_43837(35434114, -), CAediting_43838(35434120, -), CAediting_43839(35434174, -), CAediting_43840(35434182, -), CAediting_43841(35434217, -), CAediting_43842(35434223, -), CAediting_43843(35434249, -), CAediting_43844(35434292, -), CAediting_43845(35434305, -), CAediting_43846(35434368, -), CAediting_43847(35438570, -), CAediting_43848(35438611, -), CAediting_43849(35438614, -), CAediting_43850(35438626, -), CAediting_43851(35438630, -), CAediting_43852(35438631, -), CAediting_43853(35438636, -), CAediting_43854(35438643, -), CAediting_43855(35438652, -), CAediting_43856(35438653, -), CAediting_43857(35438809, -), CAediting_43858(35438826, -), CAediting_43859(35438867, -), CAediting_43860(35438902, -), CAediting_43861(35438903, -), CAediting_43862(35438911, -), CAediting_43863(35438916, -), CAediting_43864(35439006, -), CAediting_43865(35439008, -), CAediting_43866(35439010, -), CAediting_43867(35439696, -), CAediting_43868(35439713, -), CAediting_43869(35439714, -), CAediting_43870(35439739, -), CAediting_43871(35439744, -), CAediting_43872(35439789, -), CAediting_43873(35439790, -), CAediting_43874(35443506, -), CAediting_43875(35443562, -), CAediting_43876(35443589, -), CAediting_43877(35443590, -), CAediting_43878(35443610, -), CAediting_43879(35447664, -), CAediting_43880(35447669, -), CAediting_43881(35447674, -), CAediting_43882(35447677, -), CAediting_43883(35447683, -), CAediting_43884(35447687, -), CAediting_43885(35447692, -), CAediting_43886(35447693, -), CAediting_43887(35447700, -), CAediting_43888(35447704, -), CAediting_43889(35447710, -), CAediting_43890(35447771, -), CAediting_43891(35447784, -), CAediting_43892(35455643, -), CAediting_43893(35455718, -), CAediting_43894(35455754, -), CAediting_43895(35455808, -), CAediting_43896(35455834, -), CAediting_43897(35456567, -), CAediting_43898(35456632, -), CAediting_43899(35456663, -), CAediting_43900(35456690, -), CAediting_43901(35456699, -), CAediting_43902(35456702, -), CAediting_43903(35456703, -), CAediting_43904(35456759, -), CAediting_43905(35459385, -), CAediting_43906(35466874, -), CAediting_43907(35466907, -), CAediting_43908(35466984, -), CAediting_43909(35467035, -), CAediting_43910(35467059, -), CAediting_43911(35467781, -), CAediting_43912(35469063, -), CAediting_43913(35469114, -), CAediting_43914(35469121, -), CAediting_43915(35469196, -), CAediting_43916(35469911, -), CAediting_43917(35469952, -), CAediting_43918(35469965, -), CAediting_43919(35469966, -), CAediting_43920(35469967, -), CAediting_43921(35469971, -), CAediting_43922(35470047, -), CAediting_43923(35470064, -), CAediting_43924(35470083, -), CAediting_43925(35470100, -), CAediting_43926(35470411, -), CAediting_43927(35470467, -), CAediting_43928(35472567, -), CAediting_43929(35474679, -), CAediting_43930(35474709, -), CAediting_43931(35480538, -), CAediting_43932(35481388, -), CAediting_43933(35481425, -), CAediting_43934(35481431, -), CAediting_43935(35482008, -), CAediting_43936(35482091, -), CAediting_43937(35482096, -), CAediting_43938(35482097, -), CAediting_43939(35485888, -), CAediting_43940(35486297, -), CAediting_43941(35486650, -), CAediting_43942(35486795, -), CAediting_43943(35486849, -), CAediting_43944(35487351, -), CAediting_43945(35493578, -), CAediting_43946(35493596, -), CAediting_43947(35493719, -), CAediting_43948(35493762, -), CAediting_43949(35493763, -), CAediting_43950(35493798, -), CAediting_43951(35493807, -), CAediting_43952(35494695, -), CAediting_43953(35495705, -), CAediting_43954(35495707, -), CAediting_43955(35495725, -), CAediting_43956(35495729, -), CAediting_43957(35495758, -), CAediting_43958(35495791, -), CAediting_43959(35496254, -), CAediting_43960(35496357, -), CAediting_43961(35496360, -), CAediting_43962(35496389, -), CAediting_43963(35501734, -), CAediting_43964(35503991, -), CAediting_43965(35504018, -), CAediting_43966(35504024, -), CAediting_43967(35504030, -), CAediting_43968(35504079, -), CAediting_43969(35508248, -), CAediting_43970(35513396, -), CAediting_43971(35513412, -), CAediting_43972(35513448, -), CAediting_43973(35513487, -), CAediting_43974(35513492, -), CAediting_43975(35513534, -), CAediting_43976(35520370, -), CAediting_43977(35521445, -), CAediting_43978(35521467, -), CAediting_43979(35521534, -), CAediting_43980(35525445, -), CAediting_43981(35525524, -), CAediting_43982(35525591, -), CAediting_43983(35525880, -), CAediting_43984(35526115, -), CAediting_43985(35526480, -), CAediting_43986(35526557, -), CAediting_43987(35526578, -), CAediting_43988(35526605, -), CAediting_43989(35526646, -), CAediting_43990(35526821, -), CAediting_43991(35526872, -), CAediting_43992(35526873, -), CAediting_43993(35526885, -), CAediting_43994(35526905, -), CAediting_43995(35526907, -), CAediting_43996(35526978, -), CAediting_43997(35526983, -), CAediting_43998(35526995, -), CAediting_43999(35526996, -), CAediting_44000(35527010, -), CAediting_44001(35527018, -), CAediting_44002(35528234, -), CAediting_44003(35538479, -), CAediting_44004(35538504, -), CAediting_44005(35538539, -), CAediting_44006(35541030, -), CAediting_44007(35541039, -), CAediting_44008(35541052, -), CAediting_44009(35541065, -), CAediting_44010(35541074, -), CAediting_44011(35541093, -), CAediting_44012(35541106, -), CAediting_44013(35541166, -), CAediting_44014(35541206, -), CAediting_44015(35541209, -), CAediting_44016(35541214, -), CAediting_44017(35541215, -), CAediting_44018(35541223, -), CAediting_44019(35541237, -), CAediting_44020(35541253, -), CAediting_44021(35541410, -), CAediting_44022(35541415, -), CAediting_44023(35541417, -), CAediting_44024(35541435, -), CAediting_44025(35541442, -), CAediting_44026(35541446, -), CAediting_44027(35541447, -), CAediting_44028(35541455, -), CAediting_44029(35541458, -), CAediting_44030(35541459, -), CAediting_44031(35541461, -), CAediting_44032(35541465, -), CAediting_44033(35541478, -), CAediting_44034(35541482, -), CAediting_44035(35541487, -), CAediting_44036(35541514, -), CAediting_44037(35541517, -), CAediting_44038(35541519, -), CAediting_44039(35541523, -), CAediting_44040(35541525, -), CAediting_44041(35541527, -), CAediting_44042(35541528, -), CAediting_44043(35541543, -), CAediting_44044(35541629, -), CAediting_44045(35541631, -), CAediting_44046(35544117, -), CAediting_44047(35544147, -), CAediting_44048(35547892, -), CAediting_44049(35547919, -), CAediting_44050(35547938, -), CAediting_44051(35548021, -), CAediting_44052(35549134, -), CAediting_44053(35549148, -), CAediting_44054(35549153, -), CAediting_44055(35549172, -), CAediting_44056(35549173, -), CAediting_44057(35549174, -), CAediting_44058(35549189, -), CAediting_44059(35549212, -), CAediting_44060(35549217, -), CAediting_44061(35549230, -), CAediting_44062(35549241, -), CAediting_44063(35549247, -), CAediting_44064(35551442, -), CAediting_44065(35551446, -), CAediting_44066(35551455, -), CAediting_44067(35551456, -), CAediting_44068(35551466, -), CAediting_44069(35551482, -), CAediting_44070(35551495, -), CAediting_44071(35551498, -), CAediting_44072(35551518, -), CAediting_44073(35552202, -), CAediting_44074(35552220, -), CAediting_44075(35552230, -), CAediting_44076(35552906, -), CAediting_44077(35552965, -), CAediting_44078(35552975, -), |
Top |
RNA editing positional annotations for KIAA0319L using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_43835 | chr1_35434096_- | UTR3 |
CAediting_43836 | chr1_35434112_- | UTR3 |
CAediting_43837 | chr1_35434114_- | UTR3 |
CAediting_43838 | chr1_35434120_- | UTR3 |
CAediting_43839 | chr1_35434174_- | UTR3 |
CAediting_43840 | chr1_35434182_- | UTR3 |
CAediting_43841 | chr1_35434217_- | UTR3 |
CAediting_43842 | chr1_35434223_- | UTR3 |
CAediting_43843 | chr1_35434249_- | UTR3 |
CAediting_43844 | chr1_35434292_- | UTR3 |
CAediting_43845 | chr1_35434305_- | UTR3 |
CAediting_43846 | chr1_35434368_- | UTR3 |
CAediting_43847 | chr1_35438570_- | ncRNA_exonic |
CAediting_43848 | chr1_35438611_- | ncRNA_exonic |
CAediting_43849 | chr1_35438614_- | ncRNA_exonic |
CAediting_43850 | chr1_35438626_- | ncRNA_exonic |
CAediting_43851 | chr1_35438630_- | ncRNA_exonic |
CAediting_43852 | chr1_35438631_- | ncRNA_exonic |
CAediting_43853 | chr1_35438636_- | ncRNA_exonic |
CAediting_43854 | chr1_35438643_- | ncRNA_exonic |
CAediting_43855 | chr1_35438652_- | ncRNA_exonic |
CAediting_43856 | chr1_35438653_- | ncRNA_exonic |
CAediting_43857 | chr1_35438809_- | ncRNA_exonic |
CAediting_43858 | chr1_35438826_- | ncRNA_exonic |
CAediting_43859 | chr1_35438867_- | ncRNA_exonic |
CAediting_43860 | chr1_35438902_- | ncRNA_exonic |
CAediting_43861 | chr1_35438903_- | ncRNA_exonic |
CAediting_43862 | chr1_35438911_- | ncRNA_exonic |
CAediting_43863 | chr1_35438916_- | ncRNA_exonic |
CAediting_43864 | chr1_35439006_- | ncRNA_exonic |
CAediting_43865 | chr1_35439008_- | ncRNA_exonic |
CAediting_43866 | chr1_35439010_- | ncRNA_exonic |
CAediting_43867 | chr1_35439696_- | ncRNA_exonic |
CAediting_43868 | chr1_35439713_- | ncRNA_exonic |
CAediting_43869 | chr1_35439714_- | ncRNA_exonic |
CAediting_43870 | chr1_35439739_- | ncRNA_exonic |
CAediting_43871 | chr1_35439744_- | ncRNA_exonic |
CAediting_43872 | chr1_35439789_- | ncRNA_exonic |
CAediting_43873 | chr1_35439790_- | ncRNA_exonic |
CAediting_43874 | chr1_35443506_- | ncRNA_intronic |
CAediting_43875 | chr1_35443562_- | ncRNA_intronic |
CAediting_43876 | chr1_35443589_- | ncRNA_intronic |
CAediting_43877 | chr1_35443590_- | ncRNA_intronic |
CAediting_43878 | chr1_35443610_- | ncRNA_intronic |
CAediting_43879 | chr1_35447664_- | ncRNA_intronic |
CAediting_43880 | chr1_35447669_- | ncRNA_intronic |
CAediting_43881 | chr1_35447674_- | ncRNA_intronic |
CAediting_43882 | chr1_35447677_- | ncRNA_intronic |
CAediting_43883 | chr1_35447683_- | ncRNA_intronic |
CAediting_43884 | chr1_35447687_- | ncRNA_intronic |
CAediting_43885 | chr1_35447692_- | ncRNA_intronic |
CAediting_43886 | chr1_35447693_- | ncRNA_intronic |
CAediting_43887 | chr1_35447700_- | ncRNA_intronic |
CAediting_43888 | chr1_35447704_- | ncRNA_intronic |
CAediting_43889 | chr1_35447710_- | ncRNA_intronic |
CAediting_43890 | chr1_35447771_- | ncRNA_intronic |
CAediting_43891 | chr1_35447784_- | ncRNA_intronic |
CAediting_43892 | chr1_35455643_- | ncRNA_intronic |
CAediting_43893 | chr1_35455718_- | ncRNA_intronic |
CAediting_43894 | chr1_35455754_- | ncRNA_intronic |
CAediting_43895 | chr1_35455808_- | ncRNA_intronic |
CAediting_43896 | chr1_35455834_- | ncRNA_intronic |
CAediting_43897 | chr1_35456567_- | ncRNA_intronic |
CAediting_43898 | chr1_35456632_- | ncRNA_intronic |
CAediting_43899 | chr1_35456663_- | ncRNA_intronic |
CAediting_43900 | chr1_35456690_- | ncRNA_intronic |
CAediting_43901 | chr1_35456699_- | ncRNA_intronic |
CAediting_43902 | chr1_35456702_- | ncRNA_intronic |
CAediting_43903 | chr1_35456703_- | ncRNA_intronic |
CAediting_43904 | chr1_35456759_- | ncRNA_intronic |
CAediting_43905 | chr1_35459385_- | ncRNA_intronic |
CAediting_43906 | chr1_35466874_- | ncRNA_intronic |
CAediting_43907 | chr1_35466907_- | ncRNA_intronic |
CAediting_43908 | chr1_35466984_- | ncRNA_intronic |
CAediting_43909 | chr1_35467035_- | ncRNA_intronic |
CAediting_43910 | chr1_35467059_- | ncRNA_intronic |
CAediting_43911 | chr1_35467781_- | ncRNA_intronic |
CAediting_43912 | chr1_35469063_- | ncRNA_intronic |
CAediting_43913 | chr1_35469114_- | ncRNA_intronic |
CAediting_43914 | chr1_35469121_- | ncRNA_intronic |
CAediting_43915 | chr1_35469196_- | ncRNA_intronic |
CAediting_43916 | chr1_35469911_- | ncRNA_intronic |
CAediting_43917 | chr1_35469952_- | ncRNA_intronic |
CAediting_43918 | chr1_35469965_- | ncRNA_intronic |
CAediting_43919 | chr1_35469966_- | ncRNA_intronic |
CAediting_43920 | chr1_35469967_- | ncRNA_intronic |
CAediting_43921 | chr1_35469971_- | ncRNA_intronic |
CAediting_43922 | chr1_35470047_- | ncRNA_intronic |
CAediting_43923 | chr1_35470064_- | ncRNA_intronic |
CAediting_43924 | chr1_35470083_- | ncRNA_intronic |
CAediting_43925 | chr1_35470100_- | ncRNA_intronic |
CAediting_43926 | chr1_35470411_- | ncRNA_intronic |
CAediting_43927 | chr1_35470467_- | ncRNA_intronic |
CAediting_43928 | chr1_35472567_- | intronic |
CAediting_43929 | chr1_35474679_- | intronic |
CAediting_43930 | chr1_35474709_- | intronic |
CAediting_43931 | chr1_35480538_- | ncRNA_intronic |
CAediting_43932 | chr1_35481388_- | ncRNA_intronic |
CAediting_43933 | chr1_35481425_- | ncRNA_intronic |
CAediting_43934 | chr1_35481431_- | ncRNA_intronic |
CAediting_43935 | chr1_35482008_- | ncRNA_intronic |
CAediting_43936 | chr1_35482091_- | ncRNA_intronic |
CAediting_43937 | chr1_35482096_- | ncRNA_intronic |
CAediting_43938 | chr1_35482097_- | ncRNA_intronic |
CAediting_43939 | chr1_35485888_- | ncRNA_intronic |
CAediting_43940 | chr1_35486297_- | ncRNA_intronic |
CAediting_43941 | chr1_35486650_- | ncRNA_intronic |
CAediting_43942 | chr1_35486795_- | ncRNA_intronic |
CAediting_43943 | chr1_35486849_- | ncRNA_intronic |
CAediting_43944 | chr1_35487351_- | ncRNA_intronic |
CAediting_43945 | chr1_35493578_- | ncRNA_intronic |
CAediting_43946 | chr1_35493596_- | ncRNA_intronic |
CAediting_43947 | chr1_35493719_- | ncRNA_intronic |
CAediting_43948 | chr1_35493762_- | ncRNA_intronic |
CAediting_43949 | chr1_35493763_- | ncRNA_intronic |
CAediting_43950 | chr1_35493798_- | ncRNA_intronic |
CAediting_43951 | chr1_35493807_- | ncRNA_intronic |
CAediting_43952 | chr1_35494695_- | ncRNA_intronic |
CAediting_43953 | chr1_35495705_- | ncRNA_intronic |
CAediting_43954 | chr1_35495707_- | ncRNA_intronic |
CAediting_43955 | chr1_35495725_- | ncRNA_intronic |
CAediting_43956 | chr1_35495729_- | ncRNA_intronic |
CAediting_43957 | chr1_35495758_- | ncRNA_intronic |
CAediting_43958 | chr1_35495791_- | ncRNA_intronic |
CAediting_43959 | chr1_35496254_- | ncRNA_intronic |
CAediting_43960 | chr1_35496357_- | ncRNA_intronic |
CAediting_43961 | chr1_35496360_- | ncRNA_intronic |
CAediting_43962 | chr1_35496389_- | ncRNA_intronic |
CAediting_43963 | chr1_35501734_- | ncRNA_intronic |
CAediting_43964 | chr1_35503991_- | ncRNA_intronic |
CAediting_43965 | chr1_35504018_- | ncRNA_intronic |
CAediting_43966 | chr1_35504024_- | ncRNA_intronic |
CAediting_43967 | chr1_35504030_- | ncRNA_intronic |
CAediting_43968 | chr1_35504079_- | ncRNA_intronic |
CAediting_43969 | chr1_35508248_- | ncRNA_intronic |
CAediting_43970 | chr1_35513396_- | ncRNA_intronic |
CAediting_43971 | chr1_35513412_- | ncRNA_intronic |
CAediting_43972 | chr1_35513448_- | ncRNA_intronic |
CAediting_43973 | chr1_35513487_- | ncRNA_intronic |
CAediting_43974 | chr1_35513492_- | ncRNA_intronic |
CAediting_43975 | chr1_35513534_- | ncRNA_intronic |
CAediting_43976 | chr1_35520370_- | ncRNA_intronic |
CAediting_43977 | chr1_35521445_- | ncRNA_intronic |
CAediting_43978 | chr1_35521467_- | ncRNA_intronic |
CAediting_43979 | chr1_35521534_- | ncRNA_intronic |
CAediting_43980 | chr1_35525445_- | ncRNA_intronic |
CAediting_43981 | chr1_35525524_- | ncRNA_intronic |
CAediting_43982 | chr1_35525591_- | ncRNA_intronic |
CAediting_43983 | chr1_35525880_- | ncRNA_intronic |
CAediting_43984 | chr1_35526115_- | ncRNA_intronic |
CAediting_43985 | chr1_35526480_- | ncRNA_intronic |
CAediting_43986 | chr1_35526557_- | ncRNA_intronic |
CAediting_43987 | chr1_35526578_- | ncRNA_intronic |
CAediting_43988 | chr1_35526605_- | ncRNA_intronic |
CAediting_43989 | chr1_35526646_- | ncRNA_intronic |
CAediting_43990 | chr1_35526821_- | ncRNA_intronic |
CAediting_43991 | chr1_35526872_- | ncRNA_intronic |
CAediting_43992 | chr1_35526873_- | ncRNA_intronic |
CAediting_43993 | chr1_35526885_- | ncRNA_intronic |
CAediting_43994 | chr1_35526905_- | ncRNA_intronic |
CAediting_43995 | chr1_35526907_- | ncRNA_intronic |
CAediting_43996 | chr1_35526978_- | ncRNA_intronic |
CAediting_43997 | chr1_35526983_- | ncRNA_intronic |
CAediting_43998 | chr1_35526995_- | ncRNA_intronic |
CAediting_43999 | chr1_35526996_- | ncRNA_intronic |
CAediting_44000 | chr1_35527010_- | ncRNA_intronic |
CAediting_44001 | chr1_35527018_- | ncRNA_intronic |
CAediting_44002 | chr1_35528234_- | ncRNA_intronic |
CAediting_44003 | chr1_35538479_- | ncRNA_intronic |
CAediting_44004 | chr1_35538504_- | ncRNA_intronic |
CAediting_44005 | chr1_35538539_- | ncRNA_intronic |
CAediting_44006 | chr1_35541030_- | ncRNA_intronic |
CAediting_44007 | chr1_35541039_- | ncRNA_intronic |
CAediting_44008 | chr1_35541052_- | ncRNA_intronic |
CAediting_44009 | chr1_35541065_- | ncRNA_intronic |
CAediting_44010 | chr1_35541074_- | ncRNA_intronic |
CAediting_44011 | chr1_35541093_- | ncRNA_intronic |
CAediting_44012 | chr1_35541106_- | ncRNA_intronic |
CAediting_44013 | chr1_35541166_- | ncRNA_intronic |
CAediting_44014 | chr1_35541206_- | ncRNA_intronic |
CAediting_44015 | chr1_35541209_- | ncRNA_intronic |
CAediting_44016 | chr1_35541214_- | ncRNA_intronic |
CAediting_44017 | chr1_35541215_- | ncRNA_intronic |
CAediting_44018 | chr1_35541223_- | ncRNA_intronic |
CAediting_44019 | chr1_35541237_- | ncRNA_intronic |
CAediting_44020 | chr1_35541253_- | ncRNA_intronic |
CAediting_44021 | chr1_35541410_- | ncRNA_intronic |
CAediting_44022 | chr1_35541415_- | ncRNA_intronic |
CAediting_44023 | chr1_35541417_- | ncRNA_intronic |
CAediting_44024 | chr1_35541435_- | ncRNA_intronic |
CAediting_44025 | chr1_35541442_- | ncRNA_intronic |
CAediting_44026 | chr1_35541446_- | ncRNA_intronic |
CAediting_44027 | chr1_35541447_- | ncRNA_intronic |
CAediting_44028 | chr1_35541455_- | ncRNA_intronic |
CAediting_44029 | chr1_35541458_- | ncRNA_intronic |
CAediting_44030 | chr1_35541459_- | ncRNA_intronic |
CAediting_44031 | chr1_35541461_- | ncRNA_intronic |
CAediting_44032 | chr1_35541465_- | ncRNA_intronic |
CAediting_44033 | chr1_35541478_- | ncRNA_intronic |
CAediting_44034 | chr1_35541482_- | ncRNA_intronic |
CAediting_44035 | chr1_35541487_- | ncRNA_intronic |
CAediting_44036 | chr1_35541514_- | ncRNA_intronic |
CAediting_44037 | chr1_35541517_- | ncRNA_intronic |
CAediting_44038 | chr1_35541519_- | ncRNA_intronic |
CAediting_44039 | chr1_35541523_- | ncRNA_intronic |
CAediting_44040 | chr1_35541525_- | ncRNA_intronic |
CAediting_44041 | chr1_35541527_- | ncRNA_intronic |
CAediting_44042 | chr1_35541528_- | ncRNA_intronic |
CAediting_44043 | chr1_35541543_- | ncRNA_intronic |
CAediting_44044 | chr1_35541629_- | ncRNA_intronic |
CAediting_44045 | chr1_35541631_- | ncRNA_intronic |
CAediting_44046 | chr1_35544117_- | ncRNA_intronic |
CAediting_44047 | chr1_35544147_- | ncRNA_intronic |
CAediting_44048 | chr1_35547892_- | ncRNA_intronic |
CAediting_44049 | chr1_35547919_- | ncRNA_intronic |
CAediting_44050 | chr1_35547938_- | ncRNA_intronic |
CAediting_44051 | chr1_35548021_- | ncRNA_intronic |
CAediting_44052 | chr1_35549134_- | ncRNA_intronic |
CAediting_44053 | chr1_35549148_- | ncRNA_intronic |
CAediting_44054 | chr1_35549153_- | ncRNA_intronic |
CAediting_44055 | chr1_35549172_- | ncRNA_intronic |
CAediting_44056 | chr1_35549173_- | ncRNA_intronic |
CAediting_44057 | chr1_35549174_- | ncRNA_intronic |
CAediting_44058 | chr1_35549189_- | ncRNA_intronic |
CAediting_44059 | chr1_35549212_- | ncRNA_intronic |
CAediting_44060 | chr1_35549217_- | ncRNA_intronic |
CAediting_44061 | chr1_35549230_- | ncRNA_intronic |
CAediting_44062 | chr1_35549241_- | ncRNA_intronic |
CAediting_44063 | chr1_35549247_- | ncRNA_intronic |
CAediting_44064 | chr1_35551442_- | ncRNA_intronic |
CAediting_44065 | chr1_35551446_- | ncRNA_intronic |
CAediting_44066 | chr1_35551455_- | ncRNA_intronic |
CAediting_44067 | chr1_35551456_- | ncRNA_intronic |
CAediting_44068 | chr1_35551466_- | ncRNA_intronic |
CAediting_44069 | chr1_35551482_- | ncRNA_intronic |
CAediting_44070 | chr1_35551495_- | ncRNA_intronic |
CAediting_44071 | chr1_35551498_- | ncRNA_intronic |
CAediting_44072 | chr1_35551518_- | ncRNA_intronic |
CAediting_44073 | chr1_35552202_- | ncRNA_intronic |
CAediting_44074 | chr1_35552220_- | ncRNA_intronic |
CAediting_44075 | chr1_35552230_- | ncRNA_intronic |
CAediting_44076 | chr1_35552906_- | ncRNA_intronic |
CAediting_44077 | chr1_35552965_- | ncRNA_intronic |
CAediting_44078 | chr1_35552975_- | ncRNA_intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_43835 | chr1_35434096_- | SINE | Alu | AluSc8 |
CAediting_43836 | chr1_35434112_- | SINE | Alu | AluSc8 |
CAediting_43837 | chr1_35434114_- | SINE | Alu | AluSc8 |
CAediting_43838 | chr1_35434120_- | SINE | Alu | AluSc8 |
CAediting_43839 | chr1_35434174_- | SINE | Alu | AluSc8 |
CAediting_43840 | chr1_35434182_- | SINE | Alu | AluSc8 |
CAediting_43841 | chr1_35434217_- | SINE | Alu | AluSc8 |
CAediting_43842 | chr1_35434223_- | SINE | Alu | AluSc8 |
CAediting_43843 | chr1_35434249_- | SINE | Alu | AluSc8 |
CAediting_43844 | chr1_35434292_- | SINE | Alu | AluSc8 |
CAediting_43845 | chr1_35434305_- | SINE | Alu | AluSc8 |
CAediting_43846 | chr1_35434368_- | SINE | Alu | AluSc8 |
CAediting_43847 | chr1_35438570_- | SINE | Alu | AluSx1 |
CAediting_43848 | chr1_35438611_- | SINE | Alu | AluSx1 |
CAediting_43849 | chr1_35438614_- | SINE | Alu | AluSx1 |
CAediting_43850 | chr1_35438626_- | SINE | Alu | AluSx1 |
CAediting_43851 | chr1_35438630_- | SINE | Alu | AluSx1 |
CAediting_43852 | chr1_35438631_- | SINE | Alu | AluSx1 |
CAediting_43853 | chr1_35438636_- | SINE | Alu | AluSx1 |
CAediting_43854 | chr1_35438643_- | SINE | Alu | AluSx1 |
CAediting_43855 | chr1_35438652_- | SINE | Alu | AluSx1 |
CAediting_43856 | chr1_35438653_- | SINE | Alu | AluSx1 |
CAediting_43857 | chr1_35438809_- | SINE | Alu | AluJb |
CAediting_43858 | chr1_35438826_- | SINE | Alu | AluJb |
CAediting_43859 | chr1_35438867_- | SINE | Alu | AluJb |
CAediting_43860 | chr1_35438902_- | SINE | Alu | AluJb |
CAediting_43861 | chr1_35438903_- | SINE | Alu | AluJb |
CAediting_43862 | chr1_35438911_- | SINE | Alu | AluJb |
CAediting_43863 | chr1_35438916_- | SINE | Alu | AluJb |
CAediting_43864 | chr1_35439006_- | SINE | Alu | AluJb |
CAediting_43865 | chr1_35439008_- | SINE | Alu | AluJb |
CAediting_43866 | chr1_35439010_- | SINE | Alu | AluJb |
CAediting_43867 | chr1_35439696_- | SINE | Alu | AluJo |
CAediting_43868 | chr1_35439713_- | SINE | Alu | AluJo |
CAediting_43869 | chr1_35439714_- | SINE | Alu | AluJo |
CAediting_43870 | chr1_35439739_- | SINE | Alu | AluJo |
CAediting_43871 | chr1_35439744_- | SINE | Alu | AluJo |
CAediting_43872 | chr1_35439789_- | SINE | Alu | AluJo |
CAediting_43873 | chr1_35439790_- | SINE | Alu | AluJo |
CAediting_43874 | chr1_35443506_- | SINE | Alu | AluSz |
CAediting_43875 | chr1_35443562_- | SINE | Alu | AluSz |
CAediting_43876 | chr1_35443589_- | SINE | Alu | AluSz |
CAediting_43877 | chr1_35443590_- | SINE | Alu | AluSz |
CAediting_43878 | chr1_35443610_- | SINE | Alu | AluSz |
CAediting_43879 | chr1_35447664_- | SINE | Alu | AluJo |
CAediting_43880 | chr1_35447669_- | SINE | Alu | AluJo |
CAediting_43881 | chr1_35447674_- | SINE | Alu | AluJo |
CAediting_43882 | chr1_35447677_- | SINE | Alu | AluJo |
CAediting_43883 | chr1_35447683_- | SINE | Alu | AluJo |
CAediting_43884 | chr1_35447687_- | SINE | Alu | AluJo |
CAediting_43885 | chr1_35447692_- | SINE | Alu | AluJo |
CAediting_43886 | chr1_35447693_- | SINE | Alu | AluJo |
CAediting_43887 | chr1_35447700_- | SINE | Alu | AluJo |
CAediting_43888 | chr1_35447704_- | SINE | Alu | AluJo |
CAediting_43889 | chr1_35447710_- | SINE | Alu | AluJo |
CAediting_43890 | chr1_35447771_- | SINE | Alu | AluJo |
CAediting_43891 | chr1_35447784_- | SINE | Alu | AluJo |
CAediting_43892 | chr1_35455643_- | SINE | Alu | AluSg |
CAediting_43893 | chr1_35455718_- | SINE | Alu | AluSg |
CAediting_43894 | chr1_35455754_- | SINE | Alu | AluSg |
CAediting_43895 | chr1_35455808_- | SINE | Alu | AluSg |
CAediting_43896 | chr1_35455834_- | SINE | Alu | AluSg |
CAediting_43897 | chr1_35456567_- | SINE | Alu | AluSx |
CAediting_43898 | chr1_35456632_- | SINE | Alu | AluSx |
CAediting_43899 | chr1_35456663_- | SINE | Alu | AluSx |
CAediting_43900 | chr1_35456690_- | SINE | Alu | AluSx |
CAediting_43901 | chr1_35456699_- | SINE | Alu | AluSx |
CAediting_43902 | chr1_35456702_- | SINE | Alu | AluSx |
CAediting_43903 | chr1_35456703_- | SINE | Alu | AluSx |
CAediting_43904 | chr1_35456759_- | SINE | Alu | AluSx |
CAediting_43905 | chr1_35459385_- | SINE | Alu | AluY |
CAediting_43906 | chr1_35466874_- | SINE | Alu | AluSz6 |
CAediting_43907 | chr1_35466907_- | SINE | Alu | AluSz6 |
CAediting_43908 | chr1_35466984_- | SINE | Alu | AluSz6 |
CAediting_43909 | chr1_35467035_- | SINE | Alu | AluSz6 |
CAediting_43910 | chr1_35467059_- | SINE | Alu | AluSz6 |
CAediting_43911 | chr1_35467781_- | SINE | Alu | AluSz6 |
CAediting_43912 | chr1_35469063_- | SINE | Alu | AluJb |
CAediting_43913 | chr1_35469114_- | SINE | Alu | AluJb |
CAediting_43914 | chr1_35469121_- | SINE | Alu | AluJb |
CAediting_43915 | chr1_35469196_- | SINE | Alu | AluJb |
CAediting_43916 | chr1_35469911_- | SINE | Alu | AluJr |
CAediting_43917 | chr1_35469952_- | SINE | Alu | AluJr |
CAediting_43918 | chr1_35469965_- | SINE | Alu | AluJr |
CAediting_43919 | chr1_35469966_- | SINE | Alu | AluJr |
CAediting_43920 | chr1_35469967_- | SINE | Alu | AluJr |
CAediting_43921 | chr1_35469971_- | SINE | Alu | AluJr |
CAediting_43922 | chr1_35470047_- | SINE | Alu | AluJr |
CAediting_43923 | chr1_35470064_- | SINE | Alu | AluJr |
CAediting_43924 | chr1_35470083_- | SINE | Alu | AluJr |
CAediting_43925 | chr1_35470100_- | SINE | Alu | AluJr |
CAediting_43926 | chr1_35470411_- | SINE | Alu | AluJb |
CAediting_43927 | chr1_35470467_- | SINE | Alu | AluJb |
CAediting_43928 | chr1_35472567_- | SINE | Alu | AluSz |
CAediting_43929 | chr1_35474679_- | SINE | Alu | FLAM_A |
CAediting_43930 | chr1_35474709_- | SINE | Alu | FLAM_A |
CAediting_43931 | chr1_35480538_- | SINE | Alu | AluSz |
CAediting_43932 | chr1_35481388_- | LINE | L1 | L1ME1 |
CAediting_43933 | chr1_35481425_- | LINE | L1 | L1ME1 |
CAediting_43934 | chr1_35481431_- | LINE | L1 | L1ME1 |
CAediting_43935 | chr1_35482008_- | SINE | Alu | AluY |
CAediting_43936 | chr1_35482091_- | SINE | Alu | AluY |
CAediting_43937 | chr1_35482096_- | SINE | Alu | AluY |
CAediting_43938 | chr1_35482097_- | SINE | Alu | AluY |
CAediting_43939 | chr1_35485888_- | SINE | Alu | FLAM_A |
CAediting_43940 | chr1_35486297_- | SINE | Alu | AluJb |
CAediting_43941 | chr1_35486650_- | SINE | Alu | AluJr |
CAediting_43942 | chr1_35486795_- | SINE | Alu | AluJr |
CAediting_43943 | chr1_35486849_- | SINE | Alu | AluJr |
CAediting_43944 | chr1_35487351_- | SINE | Alu | AluSz6 |
CAediting_43946 | chr1_35493596_- | SINE | Alu | AluJb |
CAediting_43947 | chr1_35493719_- | SINE | Alu | AluJb |
CAediting_43948 | chr1_35493762_- | SINE | Alu | AluJb |
CAediting_43949 | chr1_35493763_- | SINE | Alu | AluJb |
CAediting_43950 | chr1_35493798_- | SINE | Alu | AluJb |
CAediting_43951 | chr1_35493807_- | SINE | Alu | AluJb |
CAediting_43952 | chr1_35494695_- | SINE | Alu | AluJb |
CAediting_43953 | chr1_35495705_- | SINE | Alu | AluJb |
CAediting_43954 | chr1_35495707_- | SINE | Alu | AluJb |
CAediting_43955 | chr1_35495725_- | SINE | Alu | AluJb |
CAediting_43956 | chr1_35495729_- | SINE | Alu | AluJb |
CAediting_43957 | chr1_35495758_- | SINE | Alu | AluJb |
CAediting_43958 | chr1_35495791_- | SINE | Alu | AluJb |
CAediting_43959 | chr1_35496254_- | SINE | Alu | AluSx1 |
CAediting_43960 | chr1_35496357_- | SINE | Alu | AluSx1 |
CAediting_43961 | chr1_35496360_- | SINE | Alu | AluSx1 |
CAediting_43962 | chr1_35496389_- | SINE | Alu | AluSx1 |
CAediting_43963 | chr1_35501734_- | SINE | Alu | AluSp |
CAediting_43964 | chr1_35503991_- | SINE | Alu | AluSz |
CAediting_43965 | chr1_35504018_- | SINE | Alu | AluSz |
CAediting_43966 | chr1_35504024_- | SINE | Alu | AluSz |
CAediting_43967 | chr1_35504030_- | SINE | Alu | AluSz |
CAediting_43968 | chr1_35504079_- | SINE | Alu | AluSz |
CAediting_43969 | chr1_35508248_- | DNA | hAT-Tip100 | MER96 |
CAediting_43970 | chr1_35513396_- | SINE | Alu | AluJo |
CAediting_43971 | chr1_35513412_- | SINE | Alu | AluJo |
CAediting_43972 | chr1_35513448_- | SINE | Alu | AluJo |
CAediting_43973 | chr1_35513487_- | SINE | Alu | AluJo |
CAediting_43974 | chr1_35513492_- | SINE | Alu | AluJo |
CAediting_43975 | chr1_35513534_- | SINE | Alu | AluJo |
CAediting_43976 | chr1_35520370_- | SINE | Alu | AluSx4 |
CAediting_43977 | chr1_35521445_- | SINE | Alu | AluY |
CAediting_43978 | chr1_35521467_- | SINE | Alu | AluY |
CAediting_43979 | chr1_35521534_- | SINE | Alu | AluY |
CAediting_43980 | chr1_35525445_- | LINE | L1 | L1MA4A |
CAediting_43981 | chr1_35525524_- | LINE | L1 | L1MA4A |
CAediting_43982 | chr1_35525591_- | LINE | L1 | L1MA4A |
CAediting_43983 | chr1_35525880_- | LINE | L1 | L1MA4A |
CAediting_43984 | chr1_35526115_- | LINE | L1 | L1MA4A |
CAediting_43985 | chr1_35526480_- | SINE | Alu | AluJo |
CAediting_43986 | chr1_35526557_- | SINE | Alu | AluJo |
CAediting_43987 | chr1_35526578_- | SINE | Alu | AluJo |
CAediting_43988 | chr1_35526605_- | SINE | Alu | AluJo |
CAediting_43989 | chr1_35526646_- | SINE | Alu | AluJo |
CAediting_43990 | chr1_35526821_- | SINE | Alu | AluJr |
CAediting_43991 | chr1_35526872_- | SINE | Alu | AluJr |
CAediting_43992 | chr1_35526873_- | SINE | Alu | AluJr |
CAediting_43993 | chr1_35526885_- | SINE | Alu | AluJr |
CAediting_43994 | chr1_35526905_- | SINE | Alu | AluJr |
CAediting_43995 | chr1_35526907_- | SINE | Alu | AluJr |
CAediting_43996 | chr1_35526978_- | SINE | Alu | AluJr |
CAediting_43997 | chr1_35526983_- | SINE | Alu | AluJr |
CAediting_43998 | chr1_35526995_- | SINE | Alu | AluJr |
CAediting_43999 | chr1_35526996_- | SINE | Alu | AluJr |
CAediting_44000 | chr1_35527010_- | SINE | Alu | AluJr |
CAediting_44001 | chr1_35527018_- | LINE | L1 | L1M2 |
CAediting_44002 | chr1_35528234_- | SINE | Alu | AluJr4 |
CAediting_44003 | chr1_35538479_- | SINE | Alu | AluSx |
CAediting_44004 | chr1_35538504_- | SINE | Alu | AluSx |
CAediting_44005 | chr1_35538539_- | SINE | Alu | AluSx |
CAediting_44006 | chr1_35541030_- | SINE | Alu | AluJr |
CAediting_44007 | chr1_35541039_- | SINE | Alu | AluJr |
CAediting_44008 | chr1_35541052_- | SINE | Alu | AluJr |
CAediting_44009 | chr1_35541065_- | SINE | Alu | AluJr |
CAediting_44010 | chr1_35541074_- | SINE | Alu | AluJr |
CAediting_44011 | chr1_35541093_- | SINE | Alu | AluJr |
CAediting_44012 | chr1_35541106_- | SINE | Alu | AluJr |
CAediting_44013 | chr1_35541166_- | SINE | Alu | AluJr |
CAediting_44014 | chr1_35541206_- | SINE | Alu | AluJr |
CAediting_44015 | chr1_35541209_- | SINE | Alu | AluJr |
CAediting_44016 | chr1_35541214_- | SINE | Alu | AluJr |
CAediting_44017 | chr1_35541215_- | SINE | Alu | AluJr |
CAediting_44018 | chr1_35541223_- | SINE | Alu | AluJr |
CAediting_44019 | chr1_35541237_- | SINE | Alu | AluJr |
CAediting_44020 | chr1_35541253_- | LINE | L2 | L2a |
CAediting_44021 | chr1_35541410_- | SINE | Alu | AluSx |
CAediting_44022 | chr1_35541415_- | SINE | Alu | AluSx |
CAediting_44023 | chr1_35541417_- | SINE | Alu | AluSx |
CAediting_44024 | chr1_35541435_- | SINE | Alu | AluSx |
CAediting_44025 | chr1_35541442_- | SINE | Alu | AluSx |
CAediting_44026 | chr1_35541446_- | SINE | Alu | AluSx |
CAediting_44027 | chr1_35541447_- | SINE | Alu | AluSx |
CAediting_44028 | chr1_35541455_- | SINE | Alu | AluSx |
CAediting_44029 | chr1_35541458_- | SINE | Alu | AluSx |
CAediting_44030 | chr1_35541459_- | SINE | Alu | AluSx |
CAediting_44031 | chr1_35541461_- | SINE | Alu | AluSx |
CAediting_44032 | chr1_35541465_- | SINE | Alu | AluSx |
CAediting_44033 | chr1_35541478_- | SINE | Alu | AluSx |
CAediting_44034 | chr1_35541482_- | SINE | Alu | AluSx |
CAediting_44035 | chr1_35541487_- | SINE | Alu | AluSx |
CAediting_44036 | chr1_35541514_- | SINE | Alu | AluSx |
CAediting_44037 | chr1_35541517_- | SINE | Alu | AluSx |
CAediting_44038 | chr1_35541519_- | SINE | Alu | AluSx |
CAediting_44039 | chr1_35541523_- | SINE | Alu | AluSx |
CAediting_44040 | chr1_35541525_- | SINE | Alu | AluSx |
CAediting_44041 | chr1_35541527_- | SINE | Alu | AluSx |
CAediting_44042 | chr1_35541528_- | SINE | Alu | AluSx |
CAediting_44043 | chr1_35541543_- | SINE | Alu | AluSx |
CAediting_44044 | chr1_35541629_- | SINE | Alu | AluSx |
CAediting_44045 | chr1_35541631_- | SINE | Alu | AluSx |
CAediting_44046 | chr1_35544117_- | SINE | Alu | AluSx3 |
CAediting_44047 | chr1_35544147_- | SINE | Alu | AluSx3 |
CAediting_44048 | chr1_35547892_- | SINE | Alu | AluSz6 |
CAediting_44049 | chr1_35547919_- | SINE | Alu | AluSz6 |
CAediting_44050 | chr1_35547938_- | SINE | Alu | AluSz6 |
CAediting_44051 | chr1_35548021_- | SINE | Alu | AluSz6 |
CAediting_44052 | chr1_35549134_- | SINE | Alu | AluJr |
CAediting_44053 | chr1_35549148_- | SINE | Alu | AluJr |
CAediting_44054 | chr1_35549153_- | SINE | Alu | AluJr |
CAediting_44055 | chr1_35549172_- | SINE | Alu | AluJr |
CAediting_44056 | chr1_35549173_- | SINE | Alu | AluJr |
CAediting_44057 | chr1_35549174_- | SINE | Alu | AluJr |
CAediting_44058 | chr1_35549189_- | SINE | Alu | AluJr |
CAediting_44059 | chr1_35549212_- | SINE | Alu | AluJr |
CAediting_44060 | chr1_35549217_- | SINE | Alu | AluJr |
CAediting_44061 | chr1_35549230_- | SINE | Alu | AluJr |
CAediting_44062 | chr1_35549241_- | SINE | Alu | AluJr |
CAediting_44063 | chr1_35549247_- | SINE | Alu | AluJr |
CAediting_44064 | chr1_35551442_- | SINE | Alu | AluSx |
CAediting_44065 | chr1_35551446_- | SINE | Alu | AluSx |
CAediting_44066 | chr1_35551455_- | SINE | Alu | AluSx |
CAediting_44067 | chr1_35551456_- | SINE | Alu | AluSx |
CAediting_44068 | chr1_35551466_- | SINE | Alu | AluSx |
CAediting_44069 | chr1_35551482_- | SINE | Alu | AluSx |
CAediting_44070 | chr1_35551495_- | SINE | Alu | AluSx |
CAediting_44071 | chr1_35551498_- | SINE | Alu | AluSx |
CAediting_44072 | chr1_35551518_- | SINE | Alu | AluSx |
CAediting_44073 | chr1_35552202_- | SINE | Alu | AluSc |
CAediting_44074 | chr1_35552220_- | SINE | Alu | AluSc |
CAediting_44075 | chr1_35552230_- | SINE | Alu | AluSc |
CAediting_44076 | chr1_35552906_- | SINE | Alu | AluSz |
CAediting_44077 | chr1_35552965_- | SINE | Alu | AluSz |
CAediting_44078 | chr1_35552975_- | SINE | Alu | AluSz |
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RNA A-to-I editing events in the alternative splicing sites for KIAA0319L |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000142687.16.KIAA0319L. |
Correlation between RNA A-to-I editing and PSI for ENSG00000142687.16.KIAA0319L. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for KIAA0319L |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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Protein coding region RNA A-to-I editings for KIAA0319L |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for KIAA0319L |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_43837 | chr1_35434114_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6838-3p | 35434110 | 35434116 | 7mer-m8 | 35434109 | 35434127 | 168.00 | -24.14 |
CAediting_43839 | chr1_35434174_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-361-3p | 35434173 | 35434179 | 7mer-m8 | 35434172 | 35434198 | 161.00 | -27.77 |
CAediting_43842 | chr1_35434223_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-513a-5p | 35434222 | 35434228 | 7mer-m8 | 35434221 | 35434238 | 152.00 | -19.02 |
CAediting_43842 | chr1_35434223_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-513a-5p | 35434222 | 35434228 | 7mer-m8 | 35434221 | 35434238 | 152.00 | -19.02 |
CAediting_43842 | chr1_35434223_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-638 | 35434217 | 35434223 | 7mer-1a | 35434217 | 35434241 | 155.00 | -32.82 |
CAediting_43846 | chr1_35434368_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4634 | 35434364 | 35434370 | 7mer-m8 | 35434363 | 35434386 | 155.00 | -34.29 |
CAediting_43836 | chr1_35434112_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4312 | 35434111 | 35434116 | 6mer | 35434110 | 35434127 | 147.00 | -20.93 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_43842 | chr1_35434223_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-10399-5p | 35434221 | 35434227 | 7mer-m8 | 35434220 | 35434244 | 148 | -14.09 |
CAediting_43839 | chr1_35434174_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-1306-5p | 35434170 | 35434176 | 7mer-m8 | 35434169 | 35434190 | 145 | -23 |
CAediting_43844 | chr1_35434292_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-3152-3p | 35434289 | 35434295 | 7mer-m8 | 35434288 | 35434308 | 149 | -20.52 |
CAediting_43845 | chr1_35434305_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-323a-5p | 35434300 | 35434306 | 7mer-m8 | 35434299 | 35434320 | 140 | -18.83 |
CAediting_43836 | chr1_35434112_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4294 | 35434108 | 35434114 | 7mer-m8 | 35434107 | 35434123 | 140 | -12.12 |
CAediting_43836 | chr1_35434112_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-431-5p | 35434111 | 35434117 | 7mer-m8 | 35434110 | 35434128 | 147 | -15.83 |
CAediting_43837 | chr1_35434114_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-431-5p | 35434111 | 35434117 | 7mer-m8 | 35434110 | 35434128 | 147 | -15.83 |
CAediting_43840 | chr1_35434182_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4503 | 35434181 | 35434188 | 8mer-1a | 35434181 | 35434202 | 141 | -10.05 |
CAediting_43843 | chr1_35434249_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4735-5p | 35434248 | 35434254 | 7mer-m8 | 35434247 | 35434268 | 140 | -4.28 |
CAediting_43841 | chr1_35434217_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-5089-5p | 35434217 | 35434223 | 7mer-m8 | 35434216 | 35434235 | 146 | -11.97 |
CAediting_43838 | chr1_35434120_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-5691 | 35434114 | 35434121 | 8mer-1a | 35434114 | 35434136 | 146 | -16.97 |
CAediting_43841 | chr1_35434217_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6506-5p | 35434216 | 35434222 | 7mer-m8 | 35434215 | 35434236 | 155 | -18.03 |
CAediting_43838 | chr1_35434120_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6773-3p | 35434118 | 35434125 | 8mer-1a | 35434118 | 35434139 | 146 | -16.46 |
CAediting_43838 | chr1_35434120_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6805-3p | 35434114 | 35434121 | 8mer-1a | 35434114 | 35434136 | 146 | -15.73 |
CAediting_43846 | chr1_35434368_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6807-5p | 35434368 | 35434374 | 7mer-m8 | 35434367 | 35434389 | 144 | -25.48 |
CAediting_43842 | chr1_35434223_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-7151-3p | 35434222 | 35434229 | 8mer-1a | 35434222 | 35434242 | 140 | -13.78 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_688080 | chr9_63819626_+ | ENSG00000142687.16 | ENST00000470388 | hsa-miR-4477b | 35470872 | 35470879 | 8mer-1a | 35470872 | 35470891 | 157 | -13.86 |
CAediting_77128 | chr1_85133844_+ | ENSG00000142687.16 | ENST00000373266 | hsa-miR-4423-3p | 35434557 | 35434563 | 7mer-m8 | 35434556 | 35434576 | 144 | -13.04 |
CAediting_414656 | chr5_72878640_+ | ENSG00000142687.16 | ENST00000482929 | hsa-miR-4804-3p | 35466611 | 35466617 | 7mer-m8 | 35466610 | 35466631 | 145 | -11.9 |
CAediting_414656 | chr5_72878640_+ | ENSG00000142687.16 | ENST00000478463 | hsa-miR-4804-3p | 35466611 | 35466617 | 7mer-m8 | 35466610 | 35466631 | 145 | -11.9 |
CAediting_442554 | chr5_154685830_+ | ENSG00000142687.16 | ENST00000470388 | hsa-miR-1303 | 35474818 | 35474824 | 7mer-m8 | 35474817 | 35474838 | 140 | -13.94 |
CAediting_414656 | chr5_72878640_+ | ENSG00000142687.16 | ENST00000470388 | hsa-miR-4804-3p | 35466611 | 35466617 | 7mer-m8 | 35466610 | 35466631 | 145 | -11.9 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_468389 | chr6_31355314_- | ENSG00000142687.16 | ENST00000373266 | hsa-miR-6891-5p | 35434645 | 35434651 | 7mer-m8 | 35434644 | 35434666 | 152 | -23.73 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for KIAA0319L |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000325722.6 | protein_coding | ||
ENST00000373266.7 | protein_coding | ||
ENST00000485551.4 | processed_transcript |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_43835 | ENST00000325722.6 | chr1_35434096_- | -1710.00 | -1710.00 | -1731.60 |
CAediting_43836 | ENST00000325722.6 | chr1_35434112_- | -1712.10 | -1710.00 | -1731.60 |
CAediting_43837 | ENST00000325722.6 | chr1_35434114_- | -1710.60 | -1710.00 | -1731.60 |
CAediting_43838 | ENST00000325722.6 | chr1_35434120_- | -1715.70 | -1710.00 | -1731.60 |
CAediting_43839 | ENST00000325722.6 | chr1_35434174_- | -1713.80 | -1710.00 | -1731.60 |
CAediting_43840 | ENST00000325722.6 | chr1_35434182_- | -1711.50 | -1710.00 | -1731.60 |
CAediting_43841 | ENST00000325722.6 | chr1_35434217_- | -1716.20 | -1710.00 | -1731.60 |
CAediting_43842 | ENST00000325722.6 | chr1_35434223_- | -1710.80 | -1710.00 | -1731.60 |
CAediting_43843 | ENST00000325722.6 | chr1_35434249_- | -1711.30 | -1710.00 | -1731.60 |
CAediting_43844 | ENST00000325722.6 | chr1_35434292_- | -1711.30 | -1710.00 | -1731.60 |
CAediting_43845 | ENST00000325722.6 | chr1_35434305_- | -1713.90 | -1710.00 | -1731.60 |
CAediting_43846 | ENST00000325722.6 | chr1_35434368_- | -1711.80 | -1710.00 | -1731.60 |
CAediting_43836 | ENST00000373266.7 | chr1_35434112_- | -839.40 | -838.10 | -856.40 |
CAediting_43837 | ENST00000373266.7 | chr1_35434114_- | -838.10 | -838.10 | -856.40 |
CAediting_43838 | ENST00000373266.7 | chr1_35434120_- | -840.10 | -838.10 | -856.40 |
CAediting_43839 | ENST00000373266.7 | chr1_35434174_- | -839.70 | -838.10 | -856.40 |
CAediting_43840 | ENST00000373266.7 | chr1_35434182_- | -838.10 | -838.10 | -856.40 |
CAediting_43841 | ENST00000373266.7 | chr1_35434217_- | -844.10 | -838.10 | -856.40 |
CAediting_43842 | ENST00000373266.7 | chr1_35434223_- | -838.10 | -838.10 | -856.40 |
CAediting_43843 | ENST00000373266.7 | chr1_35434249_- | -841.30 | -838.10 | -856.40 |
CAediting_43844 | ENST00000373266.7 | chr1_35434292_- | -837.90 | -838.10 | -856.40 |
CAediting_43845 | ENST00000373266.7 | chr1_35434305_- | -840.00 | -838.10 | -856.40 |
CAediting_43846 | ENST00000373266.7 | chr1_35434368_- | -842.90 | -838.10 | -856.40 |
CAediting_43847 | ENST00000485551.4 | chr1_35438570_- | -1543.70 | -1537.00 | -1581.20 |
CAediting_43848 | ENST00000485551.4 | chr1_35438611_- | -1543.70 | -1537.00 | -1581.20 |
CAediting_43849 | ENST00000485551.4 | chr1_35438614_- | -1537.00 | -1537.00 | -1581.20 |
CAediting_43850 | ENST00000485551.4 | chr1_35438626_- | -1536.30 | -1537.00 | -1581.20 |
CAediting_43851 | ENST00000485551.4 | chr1_35438630_- | -1536.50 | -1537.00 | -1581.20 |
CAediting_43852 | ENST00000485551.4 | chr1_35438631_- | -1540.40 | -1537.00 | -1581.20 |
CAediting_43853 | ENST00000485551.4 | chr1_35438636_- | -1536.10 | -1537.00 | -1581.20 |
CAediting_43854 | ENST00000485551.4 | chr1_35438643_- | -1543.70 | -1537.00 | -1581.20 |
CAediting_43855 | ENST00000485551.4 | chr1_35438652_- | -1543.20 | -1537.00 | -1581.20 |
CAediting_43856 | ENST00000485551.4 | chr1_35438653_- | -1536.70 | -1537.00 | -1581.20 |
CAediting_43857 | ENST00000485551.4 | chr1_35438809_- | -1533.60 | -1537.00 | -1581.20 |
CAediting_43858 | ENST00000485551.4 | chr1_35438826_- | -1537.80 | -1537.00 | -1581.20 |
CAediting_43859 | ENST00000485551.4 | chr1_35438867_- | -1536.30 | -1537.00 | -1581.20 |
CAediting_43860 | ENST00000485551.4 | chr1_35438902_- | -1538.40 | -1537.00 | -1581.20 |
CAediting_43861 | ENST00000485551.4 | chr1_35438903_- | -1537.00 | -1537.00 | -1581.20 |
CAediting_43862 | ENST00000485551.4 | chr1_35438911_- | -1536.30 | -1537.00 | -1581.20 |
CAediting_43863 | ENST00000485551.4 | chr1_35438916_- | -1537.00 | -1537.00 | -1581.20 |
CAediting_43864 | ENST00000485551.4 | chr1_35439006_- | -1539.60 | -1537.00 | -1581.20 |
CAediting_43865 | ENST00000485551.4 | chr1_35439008_- | -1536.50 | -1537.00 | -1581.20 |
CAediting_43866 | ENST00000485551.4 | chr1_35439010_- | -1536.00 | -1537.00 | -1581.20 |
CAediting_43867 | ENST00000485551.4 | chr1_35439696_- | -1540.60 | -1537.00 | -1581.20 |
CAediting_43868 | ENST00000485551.4 | chr1_35439713_- | -1536.00 | -1537.00 | -1581.20 |
CAediting_43869 | ENST00000485551.4 | chr1_35439714_- | -1537.00 | -1537.00 | -1581.20 |
CAediting_43870 | ENST00000485551.4 | chr1_35439739_- | -1536.60 | -1537.00 | -1581.20 |
CAediting_43871 | ENST00000485551.4 | chr1_35439744_- | -1535.70 | -1537.00 | -1581.20 |
CAediting_43872 | ENST00000485551.4 | chr1_35439789_- | -1542.50 | -1537.00 | -1581.20 |
CAediting_43873 | ENST00000485551.4 | chr1_35439790_- | -1536.30 | -1537.00 | -1581.20 |
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Relation with ADAR for KIAA0319L |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for KIAA0319L |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for KIAA0319L |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for KIAA0319L |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for KIAA0319L |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
KIAA0319L | C0024141 | Lupus Erythematosus, Systemic | 1 | ORPHANET |
KIAA0319L | C0206138 | CREST Syndrome | 1 | ORPHANET |
KIAA0319L | C0748540 | Scleroderma, Limited | 1 | ORPHANET |