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Editing gene: NUP85 (CAeditome ID:79902)

Gene summary for NUP85

Gene summary

Gene information	Gene symbol	NUP85
	Gene ID	79902
	Gene name	nucleoporin 85
	Synonyms	FROUNT\|NPHS17\|Nup75
	Cytomap	17q25.1
	Type of gene	protein-coding
	Description	nuclear pore complex protein Nup85nucleoporin 85kDanucleoporin Nup75nucleoporin Nup85
	Modification date	20210518
	UniProtAcc	Q9BW27
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
NUP85	GO:0000776	Nuclear pore complex protein Nup85	15146057
NUP85	GO:0005654	Nuclear pore complex protein Nup85	0000052
NUP85	GO:0005829	Nuclear pore complex protein Nup85	0000052
NUP85	GO:0031080	Nuclear pore complex protein Nup85	15146057
NUP85	GO:0031080	Nuclear pore complex protein Nup85	17360435

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RNA A-to-I events for NUP85

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000125450.9

RNA A-to-I editing events in Cancer.

CAediting_1235301(75206815, +), CAediting_1235302(75206827, +), CAediting_1235303(75206969, +), CAediting_1235304(75206981, +), CAediting_1235305(75207232, +), CAediting_1235306(75207239, +), CAediting_1235307(75207310, +), CAediting_1235308(75207313, +), CAediting_1235309(75207370, +), CAediting_1235310(75207549, +), CAediting_1235311(75207580, +), CAediting_1235312(75207609, +), CAediting_1235313(75207614, +), CAediting_1235314(75207619, +), CAediting_1235315(75207637, +), CAediting_1235316(75207792, +), CAediting_1235317(75207793, +), CAediting_1235318(75207834, +), CAediting_1235319(75207837, +), CAediting_1235320(75207840, +), CAediting_1235321(75207843, +), CAediting_1235322(75207870, +), CAediting_1235323(75207879, +), CAediting_1235324(75207883, +), CAediting_1235325(75207884, +), CAediting_1235326(75207887, +), CAediting_1235327(75207896, +), CAediting_1235328(75207902, +), CAediting_1235329(75207905, +), CAediting_1235330(75207910, +), CAediting_1235331(75207911, +), CAediting_1235332(75207915, +), CAediting_1235333(75207922, +), CAediting_1235334(75207935, +), CAediting_1235335(75207940, +), CAediting_1235336(75207950, +), CAediting_1235337(75207994, +), CAediting_1235338(75207996, +), CAediting_1235339(75208209, +), CAediting_1235340(75208216, +), CAediting_1235341(75208250, +), CAediting_1235342(75208259, +), CAediting_1235343(75208260, +), CAediting_1235344(75208292, +), CAediting_1235345(75208293, +), CAediting_1235346(75208298, +), CAediting_1235347(75208314, +), CAediting_1235348(75208316, +), CAediting_1235349(75208318, +), CAediting_1235350(75208324, +), CAediting_1235351(75208330, +), CAediting_1235352(75208334, +), CAediting_1235353(75208351, +), CAediting_1235354(75208354, +), CAediting_1235355(75208366, +), CAediting_1235356(75208370, +), CAediting_1235357(75208381, +), CAediting_1235358(75208386, +), CAediting_1235359(75208389, +), CAediting_1235360(75208390, +), CAediting_1235361(75208395, +), CAediting_1235362(75208400, +), CAediting_1235363(75208402, +), CAediting_1235364(75208425, +), CAediting_1235365(75214680, +), CAediting_1235366(75215382, +), CAediting_1235367(75215410, +), CAediting_1235368(75215420, +), CAediting_1235369(75216439, +), CAediting_1235370(75216455, +), CAediting_1235371(75216465, +), CAediting_1235372(75217636, +), CAediting_1235373(75217652, +), CAediting_1235374(75218695, +), CAediting_1235375(75218890, +), CAediting_1235376(75219294, +), CAediting_1235377(75219476, +), CAediting_1235378(75219479, +), CAediting_1235379(75219483, +), CAediting_1235380(75219508, +), CAediting_1235381(75219509, +), CAediting_1235382(75219544, +), CAediting_1235383(75219551, +), CAediting_1235384(75220599, +), CAediting_1235385(75220607, +), CAediting_1235386(75222072, +), CAediting_1235387(75222073, +), CAediting_1235388(75222143, +), CAediting_1235389(75222174, +), CAediting_1235390(75222178, +), CAediting_1235391(75222184, +), CAediting_1235392(75222219, +), CAediting_1235393(75222245, +), CAediting_1235394(75222265, +), CAediting_1235395(75222781, +), CAediting_1235396(75222920, +), CAediting_1235397(75222931, +), CAediting_1235398(75222985, +), CAediting_1235399(75223427, +), CAediting_1235400(75223527, +), CAediting_1235401(75223622, +), CAediting_1235402(75223631, +), CAediting_1235403(75223649, +), CAediting_1235404(75223650, +), CAediting_1235405(75223662, +), CAediting_1235406(75224101, +), CAediting_1235407(75224139, +), CAediting_1235408(75224146, +), CAediting_1235409(75224171, +), CAediting_1235410(75224175, +), CAediting_1235411(75224306, +), CAediting_1235412(75224319, +), CAediting_1235413(75224321, +), CAediting_1235414(75224569, +), CAediting_1235415(75224577, +), CAediting_1235416(75224578, +), CAediting_1235417(75224583, +), CAediting_1235418(75224645, +), CAediting_1235419(75224646, +), CAediting_1235420(75224655, +), CAediting_1235421(75224656, +), CAediting_1235422(75224667, +), CAediting_1235423(75224670, +), CAediting_1235424(75224671, +), CAediting_1235425(75224672, +), CAediting_1235426(75224673, +), CAediting_1235427(75224676, +), CAediting_1235428(75224679, +), CAediting_1235429(75224685, +), CAediting_1235430(75224711, +), CAediting_1235431(75224712, +), CAediting_1235432(75224721, +), CAediting_1235433(75224738, +), CAediting_1235434(75224744, +), CAediting_1235435(75224752, +), CAediting_1235436(75224753, +), CAediting_1235437(75224761, +), CAediting_1235438(75224773, +), CAediting_1235439(75224787, +), CAediting_1235440(75227724, +), CAediting_1235441(75227923, +), CAediting_1235442(75230169, +), CAediting_1235443(75230190, +), CAediting_1235444(75230228, +), CAediting_1235445(75230243, +), CAediting_1235446(75230320, +), CAediting_1235447(75230381, +), CAediting_1235448(75230391, +), CAediting_1235449(75230413, +), CAediting_1235450(75230440, +), CAediting_1235451(75230489, +), CAediting_1235452(75230558, +), CAediting_1235453(75230606, +), CAediting_1235454(75230621, +), CAediting_1235455(75230633, +), CAediting_1235456(75230773, +), CAediting_1235457(75230799, +), CAediting_1235458(75230800, +), CAediting_1235459(75230813, +), CAediting_1235460(75230822, +), CAediting_1235461(75230826, +), CAediting_1235462(75230829, +), CAediting_1235463(75230831, +), CAediting_1235464(75230840, +), CAediting_1235465(75230841, +), CAediting_1235466(75230852, +), CAediting_1235467(75230865, +), CAediting_1235468(75230870, +), CAediting_1235469(75230872, +), CAediting_1235470(75230877, +), CAediting_1235471(75230880, +), CAediting_1235472(75230885, +), CAediting_1235473(75230904, +), CAediting_1235474(75230971, +), CAediting_1235475(75230975, +), CAediting_1235476(75230976, +), CAediting_1235477(75230982, +), CAediting_1235478(75231006, +), CAediting_1235479(75231011, +), CAediting_1235480(75231025, +), CAediting_1235481(75231032, +), CAediting_1235482(75231035, +), CAediting_1235483(75231036, +), CAediting_1235484(75231038, +), CAediting_1235485(75231049, +), CAediting_1235486(75231058, +), CAediting_1235487(75231061, +), CAediting_1235488(75231071, +), CAediting_1235489(75231084, +), CAediting_1235490(75231194, +), CAediting_1235491(75233547, +), CAediting_1235492(75233699, +), CAediting_1235493(75233702, +), CAediting_1235494(75233756, +),

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RNA editing positional annotations for NUP85 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1235301	chr17_75206815_+	ncRNA_intronic
CAediting_1235302	chr17_75206827_+	ncRNA_intronic
CAediting_1235303	chr17_75206969_+	ncRNA_intronic
CAediting_1235304	chr17_75206981_+	ncRNA_intronic
CAediting_1235305	chr17_75207232_+	ncRNA_intronic
CAediting_1235306	chr17_75207239_+	ncRNA_intronic
CAediting_1235307	chr17_75207310_+	ncRNA_intronic
CAediting_1235308	chr17_75207313_+	ncRNA_intronic
CAediting_1235309	chr17_75207370_+	ncRNA_intronic
CAediting_1235310	chr17_75207549_+	ncRNA_intronic
CAediting_1235311	chr17_75207580_+	ncRNA_intronic
CAediting_1235312	chr17_75207609_+	ncRNA_intronic
CAediting_1235313	chr17_75207614_+	ncRNA_intronic
CAediting_1235314	chr17_75207619_+	ncRNA_intronic
CAediting_1235315	chr17_75207637_+	ncRNA_intronic
CAediting_1235316	chr17_75207792_+	ncRNA_intronic
CAediting_1235317	chr17_75207793_+	ncRNA_intronic
CAediting_1235318	chr17_75207834_+	ncRNA_intronic
CAediting_1235319	chr17_75207837_+	ncRNA_intronic
CAediting_1235320	chr17_75207840_+	ncRNA_intronic
CAediting_1235321	chr17_75207843_+	ncRNA_intronic
CAediting_1235322	chr17_75207870_+	ncRNA_intronic
CAediting_1235323	chr17_75207879_+	ncRNA_intronic
CAediting_1235324	chr17_75207883_+	ncRNA_intronic
CAediting_1235325	chr17_75207884_+	ncRNA_intronic
CAediting_1235326	chr17_75207887_+	ncRNA_intronic
CAediting_1235327	chr17_75207896_+	ncRNA_intronic
CAediting_1235328	chr17_75207902_+	ncRNA_intronic
CAediting_1235329	chr17_75207905_+	ncRNA_intronic
CAediting_1235330	chr17_75207910_+	ncRNA_intronic
CAediting_1235331	chr17_75207911_+	ncRNA_intronic
CAediting_1235332	chr17_75207915_+	ncRNA_intronic
CAediting_1235333	chr17_75207922_+	ncRNA_intronic
CAediting_1235334	chr17_75207935_+	ncRNA_intronic
CAediting_1235335	chr17_75207940_+	ncRNA_intronic
CAediting_1235336	chr17_75207950_+	ncRNA_intronic
CAediting_1235337	chr17_75207994_+	ncRNA_intronic
CAediting_1235338	chr17_75207996_+	ncRNA_intronic
CAediting_1235339	chr17_75208209_+	ncRNA_exonic
CAediting_1235340	chr17_75208216_+	ncRNA_exonic
CAediting_1235341	chr17_75208250_+	ncRNA_exonic
CAediting_1235342	chr17_75208259_+	ncRNA_exonic
CAediting_1235343	chr17_75208260_+	ncRNA_exonic
CAediting_1235344	chr17_75208292_+	ncRNA_exonic
CAediting_1235345	chr17_75208293_+	ncRNA_exonic
CAediting_1235346	chr17_75208298_+	ncRNA_exonic
CAediting_1235347	chr17_75208314_+	ncRNA_exonic
CAediting_1235348	chr17_75208316_+	ncRNA_exonic
CAediting_1235349	chr17_75208318_+	ncRNA_exonic
CAediting_1235350	chr17_75208324_+	ncRNA_exonic
CAediting_1235351	chr17_75208330_+	ncRNA_exonic
CAediting_1235352	chr17_75208334_+	ncRNA_exonic
CAediting_1235353	chr17_75208351_+	ncRNA_exonic
CAediting_1235354	chr17_75208354_+	ncRNA_exonic
CAediting_1235355	chr17_75208366_+	ncRNA_exonic
CAediting_1235356	chr17_75208370_+	ncRNA_exonic
CAediting_1235357	chr17_75208381_+	ncRNA_exonic
CAediting_1235358	chr17_75208386_+	ncRNA_exonic
CAediting_1235359	chr17_75208389_+	ncRNA_exonic
CAediting_1235360	chr17_75208390_+	ncRNA_exonic
CAediting_1235361	chr17_75208395_+	ncRNA_exonic
CAediting_1235362	chr17_75208400_+	ncRNA_exonic
CAediting_1235363	chr17_75208402_+	ncRNA_exonic
CAediting_1235364	chr17_75208425_+	ncRNA_exonic
CAediting_1235365	chr17_75214680_+	ncRNA_intronic
CAediting_1235366	chr17_75215382_+	ncRNA_intronic
CAediting_1235367	chr17_75215410_+	ncRNA_intronic
CAediting_1235368	chr17_75215420_+	ncRNA_intronic
CAediting_1235369	chr17_75216439_+	ncRNA_intronic
CAediting_1235370	chr17_75216455_+	ncRNA_intronic
CAediting_1235371	chr17_75216465_+	ncRNA_intronic
CAediting_1235372	chr17_75217636_+	ncRNA_intronic
CAediting_1235373	chr17_75217652_+	ncRNA_intronic
CAediting_1235374	chr17_75218695_+	ncRNA_intronic
CAediting_1235375	chr17_75218890_+	ncRNA_intronic
CAediting_1235376	chr17_75219294_+	ncRNA_intronic
CAediting_1235377	chr17_75219476_+	ncRNA_intronic
CAediting_1235378	chr17_75219479_+	ncRNA_intronic
CAediting_1235379	chr17_75219483_+	ncRNA_intronic
CAediting_1235380	chr17_75219508_+	ncRNA_intronic
CAediting_1235381	chr17_75219509_+	ncRNA_intronic
CAediting_1235382	chr17_75219544_+	ncRNA_intronic
CAediting_1235383	chr17_75219551_+	ncRNA_intronic
CAediting_1235384	chr17_75220599_+	ncRNA_intronic
CAediting_1235385	chr17_75220607_+	ncRNA_intronic
CAediting_1235386	chr17_75222072_+	ncRNA_intronic
CAediting_1235387	chr17_75222073_+	ncRNA_intronic
CAediting_1235388	chr17_75222143_+	ncRNA_intronic
CAediting_1235389	chr17_75222174_+	ncRNA_intronic
CAediting_1235390	chr17_75222178_+	ncRNA_intronic
CAediting_1235391	chr17_75222184_+	ncRNA_intronic
CAediting_1235392	chr17_75222219_+	ncRNA_intronic
CAediting_1235393	chr17_75222245_+	ncRNA_intronic
CAediting_1235394	chr17_75222265_+	ncRNA_intronic
CAediting_1235395	chr17_75222781_+	ncRNA_intronic
CAediting_1235396	chr17_75222920_+	ncRNA_intronic
CAediting_1235397	chr17_75222931_+	ncRNA_intronic
CAediting_1235398	chr17_75222985_+	ncRNA_intronic
CAediting_1235399	chr17_75223427_+	ncRNA_intronic
CAediting_1235400	chr17_75223527_+	ncRNA_intronic
CAediting_1235401	chr17_75223622_+	ncRNA_intronic
CAediting_1235402	chr17_75223631_+	ncRNA_intronic
CAediting_1235403	chr17_75223649_+	ncRNA_intronic
CAediting_1235404	chr17_75223650_+	ncRNA_intronic
CAediting_1235405	chr17_75223662_+	ncRNA_intronic
CAediting_1235406	chr17_75224101_+	ncRNA_intronic
CAediting_1235407	chr17_75224139_+	ncRNA_intronic
CAediting_1235408	chr17_75224146_+	ncRNA_intronic
CAediting_1235409	chr17_75224171_+	ncRNA_intronic
CAediting_1235410	chr17_75224175_+	ncRNA_intronic
CAediting_1235411	chr17_75224306_+	ncRNA_intronic
CAediting_1235412	chr17_75224319_+	ncRNA_intronic
CAediting_1235413	chr17_75224321_+	ncRNA_intronic
CAediting_1235414	chr17_75224569_+	ncRNA_intronic
CAediting_1235415	chr17_75224577_+	ncRNA_intronic
CAediting_1235416	chr17_75224578_+	ncRNA_intronic
CAediting_1235417	chr17_75224583_+	ncRNA_intronic
CAediting_1235418	chr17_75224645_+	ncRNA_intronic
CAediting_1235419	chr17_75224646_+	ncRNA_intronic
CAediting_1235420	chr17_75224655_+	ncRNA_intronic
CAediting_1235421	chr17_75224656_+	ncRNA_intronic
CAediting_1235422	chr17_75224667_+	ncRNA_intronic
CAediting_1235423	chr17_75224670_+	ncRNA_intronic
CAediting_1235424	chr17_75224671_+	ncRNA_intronic
CAediting_1235425	chr17_75224672_+	ncRNA_intronic
CAediting_1235426	chr17_75224673_+	ncRNA_intronic
CAediting_1235427	chr17_75224676_+	ncRNA_intronic
CAediting_1235428	chr17_75224679_+	ncRNA_intronic
CAediting_1235429	chr17_75224685_+	ncRNA_intronic
CAediting_1235430	chr17_75224711_+	ncRNA_intronic
CAediting_1235431	chr17_75224712_+	ncRNA_intronic
CAediting_1235432	chr17_75224721_+	ncRNA_intronic
CAediting_1235433	chr17_75224738_+	ncRNA_intronic
CAediting_1235434	chr17_75224744_+	ncRNA_intronic
CAediting_1235435	chr17_75224752_+	ncRNA_intronic
CAediting_1235436	chr17_75224753_+	ncRNA_intronic
CAediting_1235437	chr17_75224761_+	ncRNA_intronic
CAediting_1235438	chr17_75224773_+	ncRNA_intronic
CAediting_1235439	chr17_75224787_+	ncRNA_intronic
CAediting_1235440	chr17_75227724_+	ncRNA_intronic
CAediting_1235441	chr17_75227923_+	ncRNA_intronic
CAediting_1235442	chr17_75230169_+	ncRNA_intronic
CAediting_1235443	chr17_75230190_+	ncRNA_intronic
CAediting_1235444	chr17_75230228_+	ncRNA_intronic
CAediting_1235445	chr17_75230243_+	ncRNA_intronic
CAediting_1235446	chr17_75230320_+	ncRNA_intronic
CAediting_1235447	chr17_75230381_+	ncRNA_intronic
CAediting_1235448	chr17_75230391_+	ncRNA_intronic
CAediting_1235449	chr17_75230413_+	ncRNA_intronic
CAediting_1235450	chr17_75230440_+	ncRNA_intronic
CAediting_1235451	chr17_75230489_+	ncRNA_intronic
CAediting_1235452	chr17_75230558_+	ncRNA_intronic
CAediting_1235453	chr17_75230606_+	ncRNA_intronic
CAediting_1235454	chr17_75230621_+	ncRNA_intronic
CAediting_1235455	chr17_75230633_+	ncRNA_intronic
CAediting_1235456	chr17_75230773_+	ncRNA_intronic
CAediting_1235457	chr17_75230799_+	ncRNA_intronic
CAediting_1235458	chr17_75230800_+	ncRNA_intronic
CAediting_1235459	chr17_75230813_+	ncRNA_intronic
CAediting_1235460	chr17_75230822_+	ncRNA_intronic
CAediting_1235461	chr17_75230826_+	ncRNA_intronic
CAediting_1235462	chr17_75230829_+	ncRNA_intronic
CAediting_1235463	chr17_75230831_+	ncRNA_intronic
CAediting_1235464	chr17_75230840_+	ncRNA_intronic
CAediting_1235465	chr17_75230841_+	ncRNA_intronic
CAediting_1235466	chr17_75230852_+	ncRNA_intronic
CAediting_1235467	chr17_75230865_+	ncRNA_intronic
CAediting_1235468	chr17_75230870_+	ncRNA_intronic
CAediting_1235469	chr17_75230872_+	ncRNA_intronic
CAediting_1235470	chr17_75230877_+	ncRNA_intronic
CAediting_1235471	chr17_75230880_+	ncRNA_intronic
CAediting_1235472	chr17_75230885_+	ncRNA_intronic
CAediting_1235473	chr17_75230904_+	ncRNA_intronic
CAediting_1235474	chr17_75230971_+	ncRNA_intronic
CAediting_1235475	chr17_75230975_+	ncRNA_intronic
CAediting_1235476	chr17_75230976_+	ncRNA_intronic
CAediting_1235477	chr17_75230982_+	ncRNA_intronic
CAediting_1235478	chr17_75231006_+	ncRNA_intronic
CAediting_1235479	chr17_75231011_+	ncRNA_intronic
CAediting_1235480	chr17_75231025_+	ncRNA_intronic
CAediting_1235481	chr17_75231032_+	ncRNA_intronic
CAediting_1235482	chr17_75231035_+	ncRNA_intronic
CAediting_1235483	chr17_75231036_+	ncRNA_intronic
CAediting_1235484	chr17_75231038_+	ncRNA_intronic
CAediting_1235485	chr17_75231049_+	ncRNA_intronic
CAediting_1235486	chr17_75231058_+	ncRNA_intronic
CAediting_1235487	chr17_75231061_+	ncRNA_intronic
CAediting_1235488	chr17_75231071_+	ncRNA_intronic
CAediting_1235489	chr17_75231084_+	ncRNA_intronic
CAediting_1235490	chr17_75231194_+	ncRNA_exonic
CAediting_1235491	chr17_75233547_+	ncRNA_intronic
CAediting_1235492	chr17_75233699_+	ncRNA_intronic
CAediting_1235493	chr17_75233702_+	ncRNA_intronic
CAediting_1235494	chr17_75233756_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1235301	chr17_75206815_+	SINE	Alu	AluY
CAediting_1235302	chr17_75206827_+	SINE	Alu	AluY
CAediting_1235303	chr17_75206969_+	SINE	Alu	AluY
CAediting_1235304	chr17_75206981_+	SINE	Alu	AluY
CAediting_1235305	chr17_75207232_+	SINE	Alu	AluSp
CAediting_1235306	chr17_75207239_+	SINE	Alu	AluSp
CAediting_1235307	chr17_75207310_+	SINE	Alu	AluSp
CAediting_1235308	chr17_75207313_+	SINE	Alu	AluSp
CAediting_1235309	chr17_75207370_+	SINE	Alu	AluSp
CAediting_1235310	chr17_75207549_+	SINE	Alu	AluSg
CAediting_1235311	chr17_75207580_+	SINE	Alu	AluSg
CAediting_1235312	chr17_75207609_+	SINE	Alu	AluSg
CAediting_1235313	chr17_75207614_+	SINE	Alu	AluSg
CAediting_1235314	chr17_75207619_+	SINE	Alu	AluSg
CAediting_1235315	chr17_75207637_+	SINE	Alu	AluSg
CAediting_1235316	chr17_75207792_+	SINE	Alu	AluSx
CAediting_1235317	chr17_75207793_+	SINE	Alu	AluSx
CAediting_1235318	chr17_75207834_+	SINE	Alu	AluSx
CAediting_1235319	chr17_75207837_+	SINE	Alu	AluSx
CAediting_1235320	chr17_75207840_+	SINE	Alu	AluSx
CAediting_1235321	chr17_75207843_+	SINE	Alu	AluSx
CAediting_1235322	chr17_75207870_+	SINE	Alu	AluSx
CAediting_1235323	chr17_75207879_+	SINE	Alu	AluSx
CAediting_1235324	chr17_75207883_+	SINE	Alu	AluSx
CAediting_1235325	chr17_75207884_+	SINE	Alu	AluSx
CAediting_1235326	chr17_75207887_+	SINE	Alu	AluSx
CAediting_1235327	chr17_75207896_+	SINE	Alu	AluSx
CAediting_1235328	chr17_75207902_+	SINE	Alu	AluSx
CAediting_1235329	chr17_75207905_+	SINE	Alu	AluSx
CAediting_1235330	chr17_75207910_+	SINE	Alu	AluSx
CAediting_1235331	chr17_75207911_+	SINE	Alu	AluSx
CAediting_1235332	chr17_75207915_+	SINE	Alu	AluSx
CAediting_1235333	chr17_75207922_+	SINE	Alu	AluSx
CAediting_1235334	chr17_75207935_+	SINE	Alu	AluSx
CAediting_1235335	chr17_75207940_+	SINE	Alu	AluSx
CAediting_1235336	chr17_75207950_+	SINE	Alu	AluSx
CAediting_1235337	chr17_75207994_+	SINE	Alu	AluSx
CAediting_1235338	chr17_75207996_+	SINE	Alu	AluSx
CAediting_1235339	chr17_75208209_+	SINE	Alu	AluSx
CAediting_1235340	chr17_75208216_+	SINE	Alu	AluSx
CAediting_1235341	chr17_75208250_+	SINE	Alu	AluSx
CAediting_1235342	chr17_75208259_+	SINE	Alu	AluSx
CAediting_1235343	chr17_75208260_+	SINE	Alu	AluSx
CAediting_1235344	chr17_75208292_+	SINE	Alu	AluSx
CAediting_1235345	chr17_75208293_+	SINE	Alu	AluSx
CAediting_1235346	chr17_75208298_+	SINE	Alu	AluSx
CAediting_1235347	chr17_75208314_+	SINE	Alu	AluSx
CAediting_1235348	chr17_75208316_+	SINE	Alu	AluSx
CAediting_1235349	chr17_75208318_+	SINE	Alu	AluSx
CAediting_1235350	chr17_75208324_+	SINE	Alu	AluSx
CAediting_1235351	chr17_75208330_+	SINE	Alu	AluSx
CAediting_1235352	chr17_75208334_+	SINE	Alu	AluSx
CAediting_1235353	chr17_75208351_+	SINE	Alu	AluSx
CAediting_1235354	chr17_75208354_+	SINE	Alu	AluSx
CAediting_1235355	chr17_75208366_+	SINE	Alu	AluSx
CAediting_1235356	chr17_75208370_+	SINE	Alu	AluSx
CAediting_1235357	chr17_75208381_+	SINE	Alu	AluSx
CAediting_1235358	chr17_75208386_+	SINE	Alu	AluSx
CAediting_1235359	chr17_75208389_+	SINE	Alu	AluSx
CAediting_1235360	chr17_75208390_+	SINE	Alu	AluSx
CAediting_1235361	chr17_75208395_+	SINE	Alu	AluSx
CAediting_1235362	chr17_75208400_+	SINE	Alu	AluSx
CAediting_1235363	chr17_75208402_+	SINE	Alu	AluSx
CAediting_1235364	chr17_75208425_+	SINE	Alu	AluSx
CAediting_1235365	chr17_75214680_+	SINE	Alu	AluSz
CAediting_1235366	chr17_75215382_+	SINE	Alu	AluJr
CAediting_1235367	chr17_75215410_+	SINE	Alu	AluJr
CAediting_1235368	chr17_75215420_+	SINE	Alu	AluJr
CAediting_1235369	chr17_75216439_+	SINE	Alu	AluSp
CAediting_1235370	chr17_75216455_+	SINE	Alu	AluSp
CAediting_1235371	chr17_75216465_+	SINE	Alu	AluSp
CAediting_1235372	chr17_75217636_+	SINE	Alu	AluSx
CAediting_1235373	chr17_75217652_+	SINE	Alu	AluSx
CAediting_1235374	chr17_75218695_+	SINE	Alu	FLAM_C
CAediting_1235375	chr17_75218890_+	SINE	Alu	AluYh3
CAediting_1235376	chr17_75219294_+	SINE	Alu	AluJo
CAediting_1235377	chr17_75219476_+	SINE	Alu	AluJo
CAediting_1235378	chr17_75219479_+	SINE	Alu	AluJo
CAediting_1235379	chr17_75219483_+	SINE	Alu	AluJo
CAediting_1235380	chr17_75219508_+	SINE	Alu	AluJo
CAediting_1235381	chr17_75219509_+	SINE	Alu	AluJo
CAediting_1235382	chr17_75219544_+	SINE	Alu	AluJo
CAediting_1235383	chr17_75219551_+	SINE	Alu	AluJo
CAediting_1235384	chr17_75220599_+	SINE	Alu	AluSz
CAediting_1235385	chr17_75220607_+	SINE	Alu	AluSz
CAediting_1235386	chr17_75222072_+	SINE	Alu	AluJb
CAediting_1235387	chr17_75222073_+	SINE	Alu	AluJb
CAediting_1235388	chr17_75222143_+	SINE	Alu	AluJb
CAediting_1235389	chr17_75222174_+	SINE	Alu	AluJb
CAediting_1235390	chr17_75222178_+	SINE	Alu	AluJb
CAediting_1235391	chr17_75222184_+	SINE	Alu	AluJb
CAediting_1235392	chr17_75222219_+	SINE	Alu	AluJb
CAediting_1235393	chr17_75222245_+	SINE	Alu	AluJb
CAediting_1235394	chr17_75222265_+	SINE	Alu	AluJb
CAediting_1235395	chr17_75222781_+	SINE	Alu	AluY
CAediting_1235396	chr17_75222920_+	SINE	Alu	AluY
CAediting_1235397	chr17_75222931_+	SINE	Alu	AluY
CAediting_1235398	chr17_75222985_+	SINE	Alu	AluY
CAediting_1235399	chr17_75223427_+	SINE	Alu	AluSx
CAediting_1235400	chr17_75223527_+	SINE	Alu	AluSx
CAediting_1235401	chr17_75223622_+	SINE	Alu	AluSx
CAediting_1235402	chr17_75223631_+	SINE	Alu	AluSx
CAediting_1235403	chr17_75223649_+	SINE	Alu	AluSx
CAediting_1235404	chr17_75223650_+	SINE	Alu	AluSx
CAediting_1235405	chr17_75223662_+	SINE	Alu	AluSx
CAediting_1235406	chr17_75224101_+	SINE	Alu	AluSc8
CAediting_1235407	chr17_75224139_+	SINE	Alu	AluSc8
CAediting_1235408	chr17_75224146_+	SINE	Alu	AluSc8
CAediting_1235409	chr17_75224171_+	SINE	Alu	AluSc8
CAediting_1235410	chr17_75224175_+	SINE	Alu	AluSc8
CAediting_1235411	chr17_75224306_+	SINE	Alu	AluSc8
CAediting_1235412	chr17_75224319_+	SINE	Alu	AluSc8
CAediting_1235413	chr17_75224321_+	SINE	Alu	AluSc8
CAediting_1235414	chr17_75224569_+	SINE	Alu	AluSq2
CAediting_1235415	chr17_75224577_+	SINE	Alu	AluSq2
CAediting_1235416	chr17_75224578_+	SINE	Alu	AluSq2
CAediting_1235417	chr17_75224583_+	SINE	Alu	AluSq2
CAediting_1235418	chr17_75224645_+	SINE	Alu	AluSq2
CAediting_1235419	chr17_75224646_+	SINE	Alu	AluSq2
CAediting_1235420	chr17_75224655_+	SINE	Alu	AluSq2
CAediting_1235421	chr17_75224656_+	SINE	Alu	AluSq2
CAediting_1235422	chr17_75224667_+	SINE	Alu	AluSq2
CAediting_1235423	chr17_75224670_+	SINE	Alu	AluSq2
CAediting_1235424	chr17_75224671_+	SINE	Alu	AluSq2
CAediting_1235425	chr17_75224672_+	SINE	Alu	AluSq2
CAediting_1235426	chr17_75224673_+	SINE	Alu	AluSq2
CAediting_1235427	chr17_75224676_+	SINE	Alu	AluSq2
CAediting_1235428	chr17_75224679_+	SINE	Alu	AluSq2
CAediting_1235429	chr17_75224685_+	SINE	Alu	AluSq2
CAediting_1235430	chr17_75224711_+	SINE	Alu	AluSq2
CAediting_1235431	chr17_75224712_+	SINE	Alu	AluSq2
CAediting_1235432	chr17_75224721_+	SINE	Alu	AluSq2
CAediting_1235433	chr17_75224738_+	SINE	Alu	AluSq2
CAediting_1235434	chr17_75224744_+	SINE	Alu	AluSq2
CAediting_1235435	chr17_75224752_+	SINE	Alu	AluSq2
CAediting_1235436	chr17_75224753_+	SINE	Alu	AluSq2
CAediting_1235437	chr17_75224761_+	SINE	Alu	AluSq2
CAediting_1235438	chr17_75224773_+	SINE	Alu	AluSq2
CAediting_1235439	chr17_75224787_+	SINE	Alu	AluSq2
CAediting_1235440	chr17_75227724_+	SINE	Alu	AluJb
CAediting_1235441	chr17_75227923_+	SINE	Alu	AluJb
CAediting_1235442	chr17_75230169_+	SINE	Alu	AluSz6
CAediting_1235443	chr17_75230190_+	SINE	Alu	AluSz6
CAediting_1235444	chr17_75230228_+	SINE	Alu	AluSz6
CAediting_1235445	chr17_75230243_+	SINE	Alu	AluSz6
CAediting_1235446	chr17_75230320_+	SINE	Alu	AluSz6
CAediting_1235447	chr17_75230381_+	SINE	Alu	AluY
CAediting_1235448	chr17_75230391_+	SINE	Alu	AluY
CAediting_1235449	chr17_75230413_+	SINE	Alu	AluY
CAediting_1235450	chr17_75230440_+	SINE	Alu	AluY
CAediting_1235451	chr17_75230489_+	SINE	Alu	AluY
CAediting_1235452	chr17_75230558_+	SINE	Alu	AluY
CAediting_1235453	chr17_75230606_+	SINE	Alu	AluY
CAediting_1235454	chr17_75230621_+	SINE	Alu	AluY
CAediting_1235455	chr17_75230633_+	SINE	Alu	AluY
CAediting_1235456	chr17_75230773_+	SINE	Alu	AluSx
CAediting_1235457	chr17_75230799_+	SINE	Alu	AluSx
CAediting_1235458	chr17_75230800_+	SINE	Alu	AluSx
CAediting_1235459	chr17_75230813_+	SINE	Alu	AluSx
CAediting_1235460	chr17_75230822_+	SINE	Alu	AluSx
CAediting_1235461	chr17_75230826_+	SINE	Alu	AluSx
CAediting_1235462	chr17_75230829_+	SINE	Alu	AluSx
CAediting_1235463	chr17_75230831_+	SINE	Alu	AluSx
CAediting_1235464	chr17_75230840_+	SINE	Alu	AluSx
CAediting_1235465	chr17_75230841_+	SINE	Alu	AluSx
CAediting_1235466	chr17_75230852_+	SINE	Alu	AluSx
CAediting_1235467	chr17_75230865_+	SINE	Alu	AluSx
CAediting_1235468	chr17_75230870_+	SINE	Alu	AluSx
CAediting_1235469	chr17_75230872_+	SINE	Alu	AluSx
CAediting_1235470	chr17_75230877_+	SINE	Alu	AluSx
CAediting_1235471	chr17_75230880_+	SINE	Alu	AluSx
CAediting_1235472	chr17_75230885_+	SINE	Alu	AluSx
CAediting_1235473	chr17_75230904_+	SINE	Alu	AluSx
CAediting_1235474	chr17_75230971_+	SINE	Alu	AluSz6
CAediting_1235475	chr17_75230975_+	SINE	Alu	AluSz6
CAediting_1235476	chr17_75230976_+	SINE	Alu	AluSz6
CAediting_1235477	chr17_75230982_+	SINE	Alu	AluSz6
CAediting_1235478	chr17_75231006_+	SINE	Alu	AluSz6
CAediting_1235479	chr17_75231011_+	SINE	Alu	AluSz6
CAediting_1235480	chr17_75231025_+	SINE	Alu	AluSz6
CAediting_1235481	chr17_75231032_+	SINE	Alu	AluSz6
CAediting_1235482	chr17_75231035_+	SINE	Alu	AluSz6
CAediting_1235483	chr17_75231036_+	SINE	Alu	AluSz6
CAediting_1235484	chr17_75231038_+	SINE	Alu	AluSz6
CAediting_1235485	chr17_75231049_+	SINE	Alu	AluSz6
CAediting_1235486	chr17_75231058_+	SINE	Alu	AluSz6
CAediting_1235487	chr17_75231061_+	SINE	Alu	AluSz6
CAediting_1235488	chr17_75231071_+	SINE	Alu	AluSz6
CAediting_1235489	chr17_75231084_+	SINE	Alu	AluSz6
CAediting_1235490	chr17_75231194_+	SINE	Alu	AluSz6
CAediting_1235491	chr17_75233547_+	SINE	Alu	AluSz
CAediting_1235492	chr17_75233699_+	SINE	Alu	AluSc8
CAediting_1235493	chr17_75233702_+	SINE	Alu	AluSc8
CAediting_1235494	chr17_75233756_+	SINE	Alu	AluSc8

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RNA A-to-I editing events in the alternative splicing sites for NUP85

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1235364	chr17_75208425_+	75208423:75208431	5SS	1+0i	AGAGTGAGT	7.36	AGGGTGAGT	9.25
IR	CAediting_1235364	chr17_75208425_+	75208423:75208431	5SS	1+0i	AGAGTGAGT	7.36	AGGGTGAGT	9.25

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000125450.9.NUP85.

Correlation between RNA A-to-I editing and PSI for ENSG00000125450.9.NUP85.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for NUP85

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for NUP85

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for NUP85

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000125450.9	ENST00000581104	hsa-miR-605-3p	75232908	75232914	7mer-m8	75232890	75232915	149	-17.71
CAediting_748296	chr10_51299626_+	ENSG00000125450.9	ENST00000578830	hsa-miR-605-3p	75232908	75232914	7mer-m8	75232890	75232915	149	-17.71
CAediting_748296	chr10_51299626_+	ENSG00000125450.9	ENST00000580879	hsa-miR-605-3p	75232908	75232914	7mer-m8	75232890	75232915	149	-17.71
CAediting_442554	chr5_154685830_+	ENSG00000125450.9	ENST00000581104	hsa-miR-1303	75225151	75225157	7mer-m8	75225139	75225158	145	-16.44

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for NUP85

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for NUP85

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1235479	chr17_75231011_+	6.21717315639354e-06	0.320414793031874	.	.	.	.
CESC	CAediting_1235479	chr17_75231011_+	0.0229732467018776	0.221791412250358	.	.	.	.
LUSC	CAediting_1235479	chr17_75231011_+	2.92519973770843e-05	0.361780513332681	.	.	.	.
ESCA	CAediting_1235479	chr17_75231011_+	.	.	0.0209417177996782	0.313585767105668	.	.

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Relation with cancer stages for NUP85

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
STAD	pathologic_stage	CAediting_1235350	chr17_75208324_+	0.00578362518036512	0.285614917671672

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Relation with survival for NUP85

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for NUP85

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for NUP85

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
NUP85	C1868672	NEPHROTIC SYNDROME, STEROID-RESISTANT, AUTOSOMAL RECESSIVE	1	ORPHANET
NUP85	C4748545	NEPHROTIC SYNDROME, TYPE 17	1	GENOMICS_ENGLAND;UNIPROT

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene