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Editing gene: SNX22 (CAeditome ID:79856)

Gene summary for SNX22

Gene summary

Gene information	Gene symbol	SNX22
	Gene ID	79856
	Gene name	sorting nexin 22
	Synonyms	-
	Cytomap	15q22.31
	Type of gene	protein-coding
	Description	sorting nexin-22
	Modification date	20210518
	UniProtAcc	Q96L94
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for SNX22

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000157734.12

RNA A-to-I editing events in Cancer.

CAediting_1048940(64154216, +), CAediting_1048941(64154756, +), CAediting_1048942(64154760, +), CAediting_1048943(64154782, +), CAediting_1048944(64154783, +), CAediting_1048945(64154788, +), CAediting_1048946(64154799, +), CAediting_1048947(64154815, +), CAediting_1048948(64154818, +), CAediting_1048949(64154823, +), CAediting_1048950(64154824, +), CAediting_1048951(64154828, +), CAediting_1048952(64154831, +), CAediting_1048953(64154837, +), CAediting_1048954(64154839, +), CAediting_1048955(64154842, +), CAediting_1048956(64154848, +), CAediting_1048957(64154861, +), CAediting_1048958(64154862, +), CAediting_1048959(64154873, +), CAediting_1048960(64154876, +), CAediting_1048961(64154877, +), CAediting_1048962(64154878, +), CAediting_1048963(64154879, +), CAediting_1048964(64154880, +), CAediting_1048965(64154882, +), CAediting_1048966(64154884, +), CAediting_1048967(64154885, +), CAediting_1048968(64154886, +), CAediting_1048969(64154887, +), CAediting_1048970(64154890, +), CAediting_1048971(64154919, +), CAediting_1048972(64154920, +), CAediting_1048973(64154925, +), CAediting_1048974(64154929, +), CAediting_1048975(64154937, +), CAediting_1048976(64154982, +), CAediting_1048977(64154984, +), CAediting_1048978(64155014, +), CAediting_1048979(64155015, +), CAediting_1048980(64155020, +), CAediting_1048981(64155025, +), CAediting_1048982(64155038, +), CAediting_1048983(64155044, +), CAediting_1048984(64155063, +), CAediting_1048985(64155064, +), CAediting_1048986(64155067, +), CAediting_1048987(64155081, +), CAediting_1048988(64155090, +), CAediting_1048989(64155093, +), CAediting_1048990(64155103, +), CAediting_1048991(64155105, +), CAediting_1048992(64155129, +), CAediting_1048993(64155130, +), CAediting_1048994(64155138, +), CAediting_1048995(64155144, +), CAediting_1048996(64155145, +), CAediting_1048997(64155147, +), CAediting_1048998(64155149, +), CAediting_1048999(64155151, +), CAediting_1049000(64155160, +), CAediting_1049001(64155163, +), CAediting_1049002(64155172, +), CAediting_1049003(64155185, +), CAediting_1049004(64155192, +), CAediting_1049005(64155197, +), CAediting_1049006(64155206, +), CAediting_1049007(64155223, +), CAediting_1049008(64155224, +), CAediting_1049009(64155225, +), CAediting_1049010(64155234, +), CAediting_1049011(64155237, +), CAediting_1049012(64155246, +), CAediting_1049013(64155265, +), CAediting_1049014(64155274, +), CAediting_1049015(64155275, +), CAediting_1049016(64155283, +), CAediting_1049017(64155284, +), CAediting_1049018(64155291, +), CAediting_1049019(64155297, +), CAediting_1049020(64155298, +), CAediting_1049021(64155308, +), CAediting_1049022(64155315, +), CAediting_1049023(64155333, +), CAediting_1049024(64155342, +), CAediting_1049025(64155343, +), CAediting_1049026(64155346, +), CAediting_1049027(64155348, +), CAediting_1049028(64155354, +), CAediting_1049029(64155370, +), CAediting_1049030(64155393, +), CAediting_1049031(64155403, +), CAediting_1049032(64155405, +), CAediting_1049033(64155419, +), CAediting_1049034(64155420, +), CAediting_1049035(64155425, +), CAediting_1049036(64155426, +), CAediting_1049037(64155433, +), CAediting_1049038(64155441, +), CAediting_1049039(64155442, +), CAediting_1049040(64155446, +), CAediting_1049041(64155475, +), CAediting_1049042(64155482, +), CAediting_1049043(64155488, +), CAediting_1049044(64155490, +), CAediting_1049045(64155768, +),

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RNA editing positional annotations for SNX22 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1048940	chr15_64154216_+	ncRNA_exonic
CAediting_1048941	chr15_64154756_+	ncRNA_exonic
CAediting_1048942	chr15_64154760_+	ncRNA_exonic
CAediting_1048943	chr15_64154782_+	ncRNA_exonic
CAediting_1048944	chr15_64154783_+	ncRNA_exonic
CAediting_1048945	chr15_64154788_+	ncRNA_exonic
CAediting_1048946	chr15_64154799_+	ncRNA_exonic
CAediting_1048947	chr15_64154815_+	ncRNA_exonic
CAediting_1048948	chr15_64154818_+	ncRNA_exonic
CAediting_1048949	chr15_64154823_+	ncRNA_exonic
CAediting_1048950	chr15_64154824_+	ncRNA_exonic
CAediting_1048951	chr15_64154828_+	ncRNA_exonic
CAediting_1048952	chr15_64154831_+	ncRNA_exonic
CAediting_1048953	chr15_64154837_+	ncRNA_exonic
CAediting_1048954	chr15_64154839_+	ncRNA_exonic
CAediting_1048955	chr15_64154842_+	ncRNA_exonic
CAediting_1048956	chr15_64154848_+	ncRNA_exonic
CAediting_1048957	chr15_64154861_+	ncRNA_exonic
CAediting_1048958	chr15_64154862_+	ncRNA_exonic
CAediting_1048959	chr15_64154873_+	ncRNA_exonic
CAediting_1048960	chr15_64154876_+	ncRNA_exonic
CAediting_1048961	chr15_64154877_+	ncRNA_exonic
CAediting_1048962	chr15_64154878_+	ncRNA_exonic
CAediting_1048963	chr15_64154879_+	ncRNA_exonic
CAediting_1048964	chr15_64154880_+	ncRNA_exonic
CAediting_1048965	chr15_64154882_+	ncRNA_exonic
CAediting_1048966	chr15_64154884_+	ncRNA_exonic
CAediting_1048967	chr15_64154885_+	ncRNA_exonic
CAediting_1048968	chr15_64154886_+	ncRNA_exonic
CAediting_1048969	chr15_64154887_+	ncRNA_exonic
CAediting_1048970	chr15_64154890_+	ncRNA_exonic
CAediting_1048971	chr15_64154919_+	ncRNA_exonic
CAediting_1048972	chr15_64154920_+	ncRNA_exonic
CAediting_1048973	chr15_64154925_+	ncRNA_exonic
CAediting_1048974	chr15_64154929_+	ncRNA_exonic
CAediting_1048975	chr15_64154937_+	ncRNA_exonic
CAediting_1048976	chr15_64154982_+	ncRNA_exonic
CAediting_1048977	chr15_64154984_+	ncRNA_exonic
CAediting_1048978	chr15_64155014_+	ncRNA_exonic
CAediting_1048979	chr15_64155015_+	ncRNA_exonic
CAediting_1048980	chr15_64155020_+	ncRNA_exonic
CAediting_1048981	chr15_64155025_+	ncRNA_exonic
CAediting_1048982	chr15_64155038_+	ncRNA_exonic
CAediting_1048983	chr15_64155044_+	ncRNA_exonic
CAediting_1048984	chr15_64155063_+	ncRNA_exonic
CAediting_1048985	chr15_64155064_+	ncRNA_exonic
CAediting_1048986	chr15_64155067_+	ncRNA_exonic
CAediting_1048987	chr15_64155081_+	ncRNA_exonic
CAediting_1048988	chr15_64155090_+	ncRNA_exonic
CAediting_1048989	chr15_64155093_+	ncRNA_exonic
CAediting_1048990	chr15_64155103_+	ncRNA_exonic
CAediting_1048991	chr15_64155105_+	ncRNA_exonic;splicing
CAediting_1048992	chr15_64155129_+	ncRNA_exonic
CAediting_1048993	chr15_64155130_+	ncRNA_exonic
CAediting_1048994	chr15_64155138_+	ncRNA_exonic
CAediting_1048995	chr15_64155144_+	ncRNA_exonic
CAediting_1048996	chr15_64155145_+	ncRNA_exonic
CAediting_1048997	chr15_64155147_+	ncRNA_exonic
CAediting_1048998	chr15_64155149_+	ncRNA_exonic
CAediting_1048999	chr15_64155151_+	ncRNA_exonic
CAediting_1049000	chr15_64155160_+	ncRNA_exonic
CAediting_1049001	chr15_64155163_+	ncRNA_exonic
CAediting_1049002	chr15_64155172_+	ncRNA_exonic
CAediting_1049003	chr15_64155185_+	ncRNA_exonic
CAediting_1049004	chr15_64155192_+	ncRNA_exonic
CAediting_1049005	chr15_64155197_+	ncRNA_exonic
CAediting_1049006	chr15_64155206_+	ncRNA_exonic
CAediting_1049007	chr15_64155223_+	ncRNA_exonic
CAediting_1049008	chr15_64155224_+	ncRNA_exonic
CAediting_1049009	chr15_64155225_+	ncRNA_exonic
CAediting_1049010	chr15_64155234_+	ncRNA_exonic
CAediting_1049011	chr15_64155237_+	ncRNA_exonic
CAediting_1049012	chr15_64155246_+	ncRNA_exonic
CAediting_1049013	chr15_64155265_+	ncRNA_exonic
CAediting_1049014	chr15_64155274_+	ncRNA_exonic
CAediting_1049015	chr15_64155275_+	ncRNA_exonic
CAediting_1049016	chr15_64155283_+	ncRNA_exonic
CAediting_1049017	chr15_64155284_+	ncRNA_exonic
CAediting_1049018	chr15_64155291_+	ncRNA_exonic
CAediting_1049019	chr15_64155297_+	ncRNA_exonic
CAediting_1049020	chr15_64155298_+	ncRNA_exonic
CAediting_1049021	chr15_64155308_+	ncRNA_exonic
CAediting_1049022	chr15_64155315_+	ncRNA_exonic
CAediting_1049023	chr15_64155333_+	ncRNA_exonic
CAediting_1049024	chr15_64155342_+	ncRNA_exonic
CAediting_1049025	chr15_64155343_+	ncRNA_exonic
CAediting_1049026	chr15_64155346_+	ncRNA_exonic
CAediting_1049027	chr15_64155348_+	ncRNA_exonic
CAediting_1049028	chr15_64155354_+	ncRNA_exonic
CAediting_1049029	chr15_64155370_+	ncRNA_exonic
CAediting_1049030	chr15_64155393_+	ncRNA_exonic
CAediting_1049031	chr15_64155403_+	ncRNA_exonic
CAediting_1049032	chr15_64155405_+	ncRNA_exonic
CAediting_1049033	chr15_64155419_+	ncRNA_exonic
CAediting_1049034	chr15_64155420_+	ncRNA_exonic
CAediting_1049035	chr15_64155425_+	ncRNA_exonic
CAediting_1049036	chr15_64155426_+	ncRNA_exonic
CAediting_1049037	chr15_64155433_+	ncRNA_exonic
CAediting_1049038	chr15_64155441_+	ncRNA_exonic
CAediting_1049039	chr15_64155442_+	ncRNA_exonic
CAediting_1049040	chr15_64155446_+	ncRNA_exonic
CAediting_1049041	chr15_64155475_+	ncRNA_exonic
CAediting_1049042	chr15_64155482_+	ncRNA_exonic
CAediting_1049043	chr15_64155488_+	ncRNA_exonic
CAediting_1049044	chr15_64155490_+	ncRNA_exonic
CAediting_1049045	chr15_64155768_+	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1048942	chr15_64154760_+	SINE	Alu	AluSp
CAediting_1048943	chr15_64154782_+	SINE	Alu	AluSp
CAediting_1048944	chr15_64154783_+	SINE	Alu	AluSp
CAediting_1048945	chr15_64154788_+	SINE	Alu	AluSp
CAediting_1048946	chr15_64154799_+	SINE	Alu	AluSp
CAediting_1048947	chr15_64154815_+	SINE	Alu	AluSp
CAediting_1048948	chr15_64154818_+	SINE	Alu	AluSp
CAediting_1048949	chr15_64154823_+	SINE	Alu	AluSp
CAediting_1048950	chr15_64154824_+	SINE	Alu	AluSp
CAediting_1048951	chr15_64154828_+	SINE	Alu	AluSp
CAediting_1048952	chr15_64154831_+	SINE	Alu	AluSp
CAediting_1048953	chr15_64154837_+	SINE	Alu	AluSp
CAediting_1048954	chr15_64154839_+	SINE	Alu	AluSp
CAediting_1048955	chr15_64154842_+	SINE	Alu	AluSp
CAediting_1048956	chr15_64154848_+	SINE	Alu	AluSp
CAediting_1048957	chr15_64154861_+	SINE	Alu	AluSp
CAediting_1048958	chr15_64154862_+	SINE	Alu	AluSp
CAediting_1048959	chr15_64154873_+	SINE	Alu	AluSp
CAediting_1048960	chr15_64154876_+	SINE	Alu	AluSp
CAediting_1048961	chr15_64154877_+	SINE	Alu	AluSp
CAediting_1048962	chr15_64154878_+	SINE	Alu	AluSp
CAediting_1048963	chr15_64154879_+	SINE	Alu	AluSp
CAediting_1048964	chr15_64154880_+	SINE	Alu	AluSp
CAediting_1048965	chr15_64154882_+	SINE	Alu	AluSp
CAediting_1048966	chr15_64154884_+	SINE	Alu	AluSp
CAediting_1048967	chr15_64154885_+	SINE	Alu	AluSp
CAediting_1048968	chr15_64154886_+	SINE	Alu	AluSp
CAediting_1048969	chr15_64154887_+	SINE	Alu	AluSp
CAediting_1048970	chr15_64154890_+	SINE	Alu	AluSp
CAediting_1048971	chr15_64154919_+	SINE	Alu	AluSp
CAediting_1048972	chr15_64154920_+	SINE	Alu	AluSp
CAediting_1048973	chr15_64154925_+	SINE	Alu	AluSp
CAediting_1048974	chr15_64154929_+	SINE	Alu	AluSp
CAediting_1048975	chr15_64154937_+	SINE	Alu	AluSp
CAediting_1048976	chr15_64154982_+	SINE	Alu	AluSq2
CAediting_1048977	chr15_64154984_+	SINE	Alu	AluSq2
CAediting_1048978	chr15_64155014_+	SINE	Alu	AluSq2
CAediting_1048979	chr15_64155015_+	SINE	Alu	AluSq2
CAediting_1048980	chr15_64155020_+	SINE	Alu	AluSq2
CAediting_1048981	chr15_64155025_+	SINE	Alu	AluSq2
CAediting_1048982	chr15_64155038_+	SINE	Alu	AluSq2
CAediting_1048983	chr15_64155044_+	SINE	Alu	AluSq2
CAediting_1048984	chr15_64155063_+	SINE	Alu	AluSq2
CAediting_1048985	chr15_64155064_+	SINE	Alu	AluSq2
CAediting_1048986	chr15_64155067_+	SINE	Alu	AluSq2
CAediting_1048987	chr15_64155081_+	SINE	Alu	AluSq2
CAediting_1048988	chr15_64155090_+	SINE	Alu	AluSq2
CAediting_1048989	chr15_64155093_+	SINE	Alu	AluSq2
CAediting_1048990	chr15_64155103_+	SINE	Alu	AluSq2
CAediting_1048991	chr15_64155105_+	SINE	Alu	AluSq2
CAediting_1048992	chr15_64155129_+	SINE	Alu	AluSq2
CAediting_1048993	chr15_64155130_+	SINE	Alu	AluSq2
CAediting_1048994	chr15_64155138_+	SINE	Alu	AluSq2
CAediting_1048995	chr15_64155144_+	SINE	Alu	AluSq2
CAediting_1048996	chr15_64155145_+	SINE	Alu	AluSq2
CAediting_1048997	chr15_64155147_+	SINE	Alu	AluSq2
CAediting_1048998	chr15_64155149_+	SINE	Alu	AluSq2
CAediting_1048999	chr15_64155151_+	SINE	Alu	AluSq2
CAediting_1049000	chr15_64155160_+	SINE	Alu	AluSq2
CAediting_1049001	chr15_64155163_+	SINE	Alu	AluSq2
CAediting_1049002	chr15_64155172_+	SINE	Alu	AluSq2
CAediting_1049003	chr15_64155185_+	SINE	Alu	AluSq2
CAediting_1049004	chr15_64155192_+	SINE	Alu	AluSq2
CAediting_1049005	chr15_64155197_+	SINE	Alu	AluSq2
CAediting_1049006	chr15_64155206_+	SINE	Alu	AluSq2
CAediting_1049007	chr15_64155223_+	SINE	Alu	AluSq2
CAediting_1049008	chr15_64155224_+	SINE	Alu	AluSq2
CAediting_1049009	chr15_64155225_+	SINE	Alu	AluSq2
CAediting_1049010	chr15_64155234_+	SINE	Alu	AluSq2
CAediting_1049011	chr15_64155237_+	SINE	Alu	AluSq2
CAediting_1049012	chr15_64155246_+	SINE	Alu	AluSq2
CAediting_1049013	chr15_64155265_+	SINE	Alu	AluSp
CAediting_1049014	chr15_64155274_+	SINE	Alu	AluSp
CAediting_1049015	chr15_64155275_+	SINE	Alu	AluSp
CAediting_1049016	chr15_64155283_+	SINE	Alu	AluSp
CAediting_1049017	chr15_64155284_+	SINE	Alu	AluSp
CAediting_1049018	chr15_64155291_+	SINE	Alu	AluSp
CAediting_1049019	chr15_64155297_+	SINE	Alu	AluSp
CAediting_1049020	chr15_64155298_+	SINE	Alu	AluSp
CAediting_1049021	chr15_64155308_+	SINE	Alu	AluSp
CAediting_1049022	chr15_64155315_+	SINE	Alu	AluSp
CAediting_1049023	chr15_64155333_+	SINE	Alu	AluSp
CAediting_1049024	chr15_64155342_+	SINE	Alu	AluSp
CAediting_1049025	chr15_64155343_+	SINE	Alu	AluSp
CAediting_1049026	chr15_64155346_+	SINE	Alu	AluSp
CAediting_1049027	chr15_64155348_+	SINE	Alu	AluSp
CAediting_1049028	chr15_64155354_+	SINE	Alu	AluSp
CAediting_1049029	chr15_64155370_+	SINE	Alu	AluSp
CAediting_1049031	chr15_64155403_+	SINE	Alu	FLAM_C
CAediting_1049032	chr15_64155405_+	SINE	Alu	FLAM_C
CAediting_1049033	chr15_64155419_+	SINE	Alu	FLAM_C
CAediting_1049034	chr15_64155420_+	SINE	Alu	FLAM_C
CAediting_1049035	chr15_64155425_+	SINE	Alu	FLAM_C
CAediting_1049036	chr15_64155426_+	SINE	Alu	FLAM_C
CAediting_1049037	chr15_64155433_+	SINE	Alu	FLAM_C
CAediting_1049038	chr15_64155441_+	SINE	Alu	FLAM_C
CAediting_1049039	chr15_64155442_+	SINE	Alu	FLAM_C
CAediting_1049040	chr15_64155446_+	SINE	Alu	FLAM_C
CAediting_1049041	chr15_64155475_+	SINE	Alu	FLAM_C
CAediting_1049042	chr15_64155482_+	SINE	Alu	FLAM_C
CAediting_1049043	chr15_64155488_+	SINE	Alu	FLAM_C
CAediting_1049044	chr15_64155490_+	SINE	Alu	FLAM_C

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RNA A-to-I editing events in the alternative splicing sites for SNX22

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_1048941	chr15_64154756_+	64154750:64154758	5SS	0+4i	GAAGTCAGC	-2.65	GAAGTCGGC	-6.51
IR	CAediting_1048978	chr15_64155014_+	64155006:64155014	5SS	0+6i	CAGGCTGGA	-2.16	CAGGCTGGG	-2.49
IR	CAediting_1048988	chr15_64155090_+	64155086:64155108	3SS	0+16i	CTCGAGTAGCTGGGATTACAGGC	-24.16	CTCGGGTAGCTGGGATTACAGGC	-21.85
IR	CAediting_1048989	chr15_64155093_+	64155086:64155108	3SS	0+13i	CTCGAGTAGCTGGGATTACAGGC	-24.16	CTCGAGTGGCTGGGATTACAGGC	-19.88
IR	CAediting_1048990	chr15_64155103_+	64155086:64155108	3SS	0+3i	CTCGAGTAGCTGGGATTACAGGC	-24.16	CTCGAGTAGCTGGGATTGCAGGC	-38.21
IR	CAediting_1048991	chr15_64155105_+	64155086:64155108	3SS	0+1i	CTCGAGTAGCTGGGATTACAGGC	-24.16	CTCGAGTAGCTGGGATTACGGGC	-15.41
IR	CAediting_1049000	chr15_64155160_+	64155153:64155175	3SS	0+13i	GGGTTTCACCACGTTGGCCAGGC	-14.25	GGGTTTCGCCACGTTGGCCAGGC	-14.43
IR	CAediting_1049001	chr15_64155163_+	64155153:64155175	3SS	0+10i	GGGTTTCACCACGTTGGCCAGGC	-14.25	GGGTTTCACCGCGTTGGCCAGGC	-13.38
IR	CAediting_1049002	chr15_64155172_+	64155153:64155175	3SS	0+1i	GGGTTTCACCACGTTGGCCAGGC	-14.25	GGGTTTCACCACGTTGGCCGGGC	-5.5
IR	CAediting_1049029	chr15_64155370_+	64155370:64155392	3SS	0+20i	AATAAATAATAAAGGAAGAAGTC	-29.42	GATAAATAATAAAGGAAGAAGTC	-29.74
IR	CAediting_1049030	chr15_64155393_+	64155386:64155408	3SS	0+13i	AGAAGTCAGCTGGGTGCAGAGGC	-25.01	AGAAGTCGGCTGGGTGCAGAGGC	-21.83
IR	CAediting_1049031	chr15_64155403_+	64155386:64155408	3SS	0+3i	AGAAGTCAGCTGGGTGCAGAGGC	-25.01	AGAAGTCAGCTGGGTGCGGAGGC	-31.86
IR	CAediting_1049032	chr15_64155405_+	64155386:64155408	3SS	0+1i	AGAAGTCAGCTGGGTGCAGAGGC	-25.01	AGAAGTCAGCTGGGTGCAGGGGC	-16.26
IR	CAediting_1049033	chr15_64155419_+	64155414:64155436	3SS	0+15i	CCTGTAATCCCAATACTTTAGGA	-12.67	CCTGTGATCCCAATACTTTAGGA	-11.3
IR	CAediting_1049034	chr15_64155420_+	64155414:64155436	3SS	0+14i	CCTGTAATCCCAATACTTTAGGA	-12.67	CCTGTAGTCCCAATACTTTAGGA	-14.2
IR	CAediting_1049035	chr15_64155425_+	64155414:64155436	3SS	0+9i	CCTGTAATCCCAATACTTTAGGA	-12.67	CCTGTAATCCCGATACTTTAGGA	-13.46
IR	CAediting_1049036	chr15_64155426_+	64155414:64155436	3SS	0+8i	CCTGTAATCCCAATACTTTAGGA	-12.67	CCTGTAATCCCAGTACTTTAGGA	-17.64
IR	CAediting_1049037	chr15_64155433_+	64155414:64155436	3SS	0+1i	CCTGTAATCCCAATACTTTAGGA	-12.67	CCTGTAATCCCAATACTTTGGGA	-3.92

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000157734.12.SNX22.

Correlation between RNA A-to-I editing and PSI for ENSG00000157734.12.SNX22.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for SNX22

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

LGG.CAediting_1048944.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1048944.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1048954.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1048972.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1048979.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1049008.ENSG00000157734.SNX22.png
Soverview

THCA.CAediting_1049026.ENSG00000157734.SNX22.png
Soverview

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Protein coding region RNA A-to-I editings for SNX22

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for SNX22

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1048944	chr15_64154783_+	ENSG00000157734.12	ENST00000325881	hsa-miR-8052	64154781	64154787	7mer-1a	64154769	64154787	148.00	-29.06
CAediting_1048950	chr15_64154824_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6790-3p	64154821	64154827	7mer-1a	64154805	64154827	141.00	-23.27
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-103a-1-5p	64154857	64154862	6mer	64154841	64154863	141.00	-19.06
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-103a-2-5p	64154857	64154862	6mer	64154841	64154863	141.00	-15.21
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4508	64154860	64154866	7mer-m8	64154851	64154867	140.00	-18.55
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6815-3p	64154857	64154863	7mer-m8	64154843	64154864	147.00	-16.74
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-942-5p	64154856	64154861	6mer	64154841	64154862	148.00	-15.16
CAediting_1048959	chr15_64154873_+	ENSG00000157734.12	ENST00000325881	hsa-miR-374b-3p	64154870	64154877	8mer-1a	64154855	64154877	142.00	-10.45
CAediting_1048960	chr15_64154876_+	ENSG00000157734.12	ENST00000325881	hsa-miR-222-5p	64154870	64154877	8mer-1a	64154856	64154877	140.00	-9.13
CAediting_1048960	chr15_64154876_+	ENSG00000157734.12	ENST00000325881	hsa-miR-30a-3p	64154872	64154879	8mer-1a	64154857	64154879	149.00	-11.42
CAediting_1048960	chr15_64154876_+	ENSG00000157734.12	ENST00000325881	hsa-miR-30d-3p	64154872	64154879	8mer-1a	64154855	64154879	150.00	-12.89
CAediting_1048960	chr15_64154876_+	ENSG00000157734.12	ENST00000325881	hsa-miR-30e-3p	64154872	64154879	8mer-1a	64154857	64154879	149.00	-11.42
CAediting_1048960	chr15_64154876_+	ENSG00000157734.12	ENST00000325881	hsa-miR-936	64154869	64154876	8mer-1a	64154854	64154876	155.00	-18.35
CAediting_1048961	chr15_64154877_+	ENSG00000157734.12	ENST00000325881	hsa-miR-325	64154870	64154877	8mer-1a	64154855	64154877	141.00	-10.90
CAediting_1048962	chr15_64154878_+	ENSG00000157734.12	ENST00000325881	hsa-miR-630	64154876	64154883	8mer-1a	64154863	64154883	158.00	-15.14
CAediting_1048965	chr15_64154882_+	ENSG00000157734.12	ENST00000325881	hsa-miR-153-5p	64154875	64154881	7mer-m8	64154860	64154882	144.00	-8.17
CAediting_1048965	chr15_64154882_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3680-3p	64154879	64154886	8mer-1a	64154864	64154886	140.00	-14.25
CAediting_1048965	chr15_64154882_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3680-3p	64154879	64154886	8mer-1a	64154864	64154886	140.00	-14.25
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64154913	64154919	7mer-m8	64154903	64154920	152.00	-17.76
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64154913	64154919	7mer-m8	64154903	64154920	152.00	-17.76
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-638	64154918	64154924	7mer-1a	64154900	64154924	155.00	-31.88
CAediting_1048972	chr15_64154920_+	ENSG00000157734.12	ENST00000325881	hsa-miR-8052	64154918	64154924	7mer-1a	64154906	64154924	143.00	-23.66
CAediting_1048974	chr15_64154929_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1207-3p	64154922	64154928	7mer-m8	64154912	64154929	140.00	-12.56
CAediting_1048974	chr15_64154929_+	ENSG00000157734.12	ENST00000325881	hsa-miR-646	64154924	64154930	7mer-m8	64154913	64154931	145.00	-14.99
CAediting_1048975	chr15_64154937_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6778-3p	64154932	64154938	7mer-m8	64154920	64154939	141.00	-15.45
CAediting_1048980	chr15_64155020_+	ENSG00000157734.12	ENST00000325881	hsa-miR-20a-3p	64155013	64155019	7mer-m8	64155001	64155020	145.00	-14.88
CAediting_1048980	chr15_64155020_+	ENSG00000157734.12	ENST00000325881	hsa-miR-217-5p	64155014	64155020	7mer-m8	64154999	64155021	142.00	-18.58
CAediting_1048980	chr15_64155020_+	ENSG00000157734.12	ENST00000325881	hsa-miR-324-3p	64155016	64155022	7mer-m8	64154999	64155023	144.00	-22.13
CAediting_1048980	chr15_64155020_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4252	64155017	64155024	8mer-1a	64155004	64155024	150.00	-22.82
CAediting_1048989	chr15_64155093_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4691-3p	64155090	64155096	7mer-m8	64155079	64155097	147.00	-29.46
CAediting_1048992	chr15_64155129_+	ENSG00000157734.12	ENST00000325881	hsa-miR-34a-3p	64155125	64155131	7mer-m8	64155110	64155132	147.00	-11.29
CAediting_1048997	chr15_64155147_+	ENSG00000157734.12	ENST00000325881	hsa-miR-136-5p	64155143	64155150	8mer-1a	64155128	64155150	140.00	-9.33
CAediting_1048998	chr15_64155149_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6883-3p	64155144	64155150	7mer-m8	64155130	64155151	140.00	-9.61
CAediting_1049002	chr15_64155172_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3940-3p	64155169	64155175	7mer-m8	64155158	64155176	144.00	-24.32
CAediting_1049003	chr15_64155185_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3139	64155184	64155189	6mer	64155168	64155190	141.00	-23.67
CAediting_1049003	chr15_64155185_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3663-3p	64155182	64155187	6mer	64155166	64155188	145.00	-21.99
CAediting_1049003	chr15_64155185_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4457	64155179	64155184	6mer	64155165	64155185	141.00	-19.89
CAediting_1049009	chr15_64155225_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3189-3p	64155219	64155225	7mer-m8	64155203	64155226	153.00	-24.71
CAediting_1049009	chr15_64155225_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6813-3p	64155220	64155226	7mer-m8	64155207	64155227	140.00	-12.55
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000325881	hsa-miR-8052	64155418	64155424	7mer-1a	64155406	64155424	148.00	-29.06
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000558466	hsa-miR-8052	64155418	64155424	7mer-1a	64155406	64155424	148.00	-29.06
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000325881	hsa-miR-150-5p	64155430	64155436	7mer-m8	64155416	64155437	140.00	-13.46
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000325881	hsa-miR-186-3p	64155428	64155435	8mer-1a	64155411	64155435	141.00	-19.85
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3973	64155426	64155432	7mer-m8	64155410	64155433	147.00	-8.73
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000558466	hsa-miR-150-5p	64155430	64155436	7mer-m8	64155416	64155437	140.00	-13.46
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000558466	hsa-miR-186-3p	64155428	64155435	8mer-1a	64155411	64155435	141.00	-19.85
CAediting_1049037	chr15_64155433_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3973	64155426	64155432	7mer-m8	64155410	64155433	147.00	-8.73
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000325881	hsa-miR-18a-3p	64155440	64155446	7mer-m8	64155427	64155447	151.00	-22.40
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3176	64155435	64155441	7mer-m8	64155424	64155442	140.00	-14.33
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3922-3p	64155435	64155441	7mer-m8	64155423	64155442	145.00	-15.99
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000325881	hsa-miR-874-3p	64155439	64155445	7mer-m8	64155423	64155446	156.00	-29.84
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000558466	hsa-miR-18a-3p	64155440	64155446	7mer-m8	64155427	64155447	151.00	-22.40
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3176	64155435	64155441	7mer-m8	64155424	64155442	140.00	-14.33
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3922-3p	64155435	64155441	7mer-m8	64155423	64155442	145.00	-15.99
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000558466	hsa-miR-874-3p	64155439	64155445	7mer-m8	64155423	64155446	156.00	-29.84
CAediting_1048943	chr15_64154782_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64154776	64154782	7mer-m8	64154766	64154783	152.00	-17.32
CAediting_1048943	chr15_64154782_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64154776	64154782	7mer-m8	64154766	64154783	152.00	-17.32
CAediting_1048943	chr15_64154782_+	ENSG00000157734.12	ENST00000325881	hsa-miR-638	64154781	64154787	7mer-1a	64154763	64154787	155.00	-34.17
CAediting_1048945	chr15_64154788_+	ENSG00000157734.12	ENST00000325881	hsa-miR-371a-3p	64154786	64154792	7mer-m8	64154771	64154793	144.00	-15.05
CAediting_1048947	chr15_64154815_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1180-5p	64154810	64154817	8mer-1a	64154797	64154817	157.00	-27.96
CAediting_1048947	chr15_64154815_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7114-3p	64154810	64154817	8mer-1a	64154797	64154817	163.00	-27.69
CAediting_1048947	chr15_64154815_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7973	64154812	64154818	7mer-m8	64154800	64154819	140.00	-14.50
CAediting_1048947	chr15_64154815_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7973	64154812	64154818	7mer-m8	64154800	64154819	140.00	-14.50
CAediting_1048949	chr15_64154823_+	ENSG00000157734.12	ENST00000325881	hsa-miR-508-5p	64154819	64154825	7mer-m8	64154805	64154826	159.00	-26.80
CAediting_1048952	chr15_64154831_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4732-3p	64154824	64154830	7mer-m8	64154811	64154831	147.00	-16.46
CAediting_1048953	chr15_64154837_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4281	64154834	64154841	8mer-1a	64154824	64154841	142.00	-19.48
CAediting_1048953	chr15_64154837_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6716-3p	64154830	64154836	7mer-m8	64154816	64154837	153.00	-18.71
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3176	64154836	64154842	7mer-m8	64154825	64154843	160.00	-25.38
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3922-3p	64154836	64154842	7mer-m8	64154819	64154843	165.00	-27.74
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6878-3p	64154835	64154841	7mer-m8	64154822	64154842	148.00	-24.06
CAediting_1048956	chr15_64154848_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4435	64154844	64154850	7mer-m8	64154831	64154851	146.00	-18.71
CAediting_1048956	chr15_64154848_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4435	64154844	64154850	7mer-m8	64154831	64154851	146.00	-18.71
CAediting_1048956	chr15_64154848_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4755-3p	64154842	64154848	7mer-m8	64154828	64154849	145.00	-16.93
CAediting_1048957	chr15_64154861_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6895-3p	64154856	64154862	7mer-m8	64154842	64154863	142.00	-15.57
CAediting_1048967	chr15_64154885_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4742-3p	64154878	64154885	8mer-1a	64154863	64154885	142.00	-9.18
CAediting_1048967	chr15_64154885_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4778-5p	64154881	64154887	7mer-m8	64154867	64154888	152.00	-16.23
CAediting_1048968	chr15_64154886_+	ENSG00000157734.12	ENST00000325881	hsa-miR-643	64154879	64154886	8mer-1a	64154864	64154886	143.00	-11.13
CAediting_1048978	chr15_64155014_+	ENSG00000157734.12	ENST00000325881	hsa-miR-324-5p	64155011	64155018	8mer-1a	64154995	64155018	155.00	-21.79
CAediting_1048978	chr15_64155014_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7977	64155008	64155014	7mer-m8	64154998	64155015	151.00	-19.03
CAediting_1048979	chr15_64155015_+	ENSG00000157734.12	ENST00000325881	hsa-miR-508-5p	64155009	64155015	7mer-m8	64154992	64155016	152.00	-24.34
CAediting_1048979	chr15_64155015_+	ENSG00000157734.12	ENST00000325881	hsa-miR-766-3p	64155008	64155014	7mer-m8	64154994	64155015	145.00	-20.71
CAediting_1048979	chr15_64155015_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7703	64155012	64155019	8mer-1a	64154997	64155019	162.00	-25.06
CAediting_1048983	chr15_64155044_+	ENSG00000157734.12	ENST00000325881	hsa-miR-185-3p	64155041	64155047	7mer-m8	64155027	64155048	144.00	-18.61
CAediting_1048983	chr15_64155044_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4741	64155041	64155046	6mer	64155022	64155047	143.00	-29.81
CAediting_1048983	chr15_64155044_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6829-5p	64155040	64155046	7mer-m8	64155028	64155047	153.00	-22.98
CAediting_1048983	chr15_64155044_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6846-5p	64155042	64155048	7mer-m8	64155028	64155049	152.00	-31.17
CAediting_1048983	chr15_64155044_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6848-5p	64155042	64155048	7mer-m8	64155027	64155049	162.00	-32.37
CAediting_1048985	chr15_64155064_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4539	64155058	64155063	6mer	64155044	64155064	142.00	-24.57
CAediting_1048988	chr15_64155090_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4740-3p	64155084	64155090	7mer-m8	64155070	64155091	153.00	-22.26
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548ae-3p	64155128	64155134	7mer-m8	64155115	64155135	141.00	-10.65
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548ae-3p	64155128	64155134	7mer-m8	64155115	64155135	141.00	-10.65
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548ah-3p	64155128	64155134	7mer-m8	64155113	64155135	143.00	-11.29
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548aj-3p	64155128	64155134	7mer-m8	64155115	64155135	141.00	-8.54
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548aj-3p	64155128	64155134	7mer-m8	64155115	64155135	141.00	-8.54
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548am-3p	64155128	64155134	7mer-m8	64155113	64155135	143.00	-10.65
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548aq-3p	64155128	64155134	7mer-m8	64155114	64155135	141.00	-10.72
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548j-3p	64155128	64155134	7mer-m8	64155115	64155135	141.00	-10.65
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548x-3p	64155128	64155134	7mer-m8	64155116	64155135	141.00	-8.54
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548x-3p	64155128	64155134	7mer-m8	64155116	64155135	141.00	-8.54
CAediting_1048993	chr15_64155130_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7844-5p	64155126	64155132	7mer-m8	64155112	64155133	160.00	-17.71
CAediting_1048999	chr15_64155151_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1224-3p	64155148	64155154	7mer-m8	64155135	64155155	145.00	-16.27
CAediting_1049004	chr15_64155192_+	ENSG00000157734.12	ENST00000325881	hsa-miR-665	64155185	64155191	7mer-m8	64155173	64155192	157.00	-22.97
CAediting_1049006	chr15_64155206_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4767	64155204	64155210	7mer-m8	64155186	64155211	152.00	-25.89
CAediting_1049007	chr15_64155223_+	ENSG00000157734.12	ENST00000325881	hsa-miR-425-3p	64155217	64155224	8mer-1a	64155204	64155224	153.00	-20.16
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-204-3p	64155217	64155224	8mer-1a	64155204	64155224	153.00	-22.75
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3192-5p	64155218	64155224	7mer-1a	64155201	64155224	148.00	-32.35
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-326	64155219	64155225	7mer-m8	64155207	64155226	140.00	-15.12
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-330-5p	64155219	64155225	7mer-m8	64155205	64155226	140.00	-20.44
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4314	64155218	64155224	7mer-m8	64155207	64155225	147.00	-21.70
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4646-5p	64155217	64155224	8mer-1a	64155203	64155224	159.00	-26.20
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-514a-5p	64155220	64155226	7mer-m8	64155204	64155227	150.00	-18.02
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-514a-5p	64155220	64155226	7mer-m8	64155204	64155227	150.00	-18.02
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-514a-5p	64155220	64155226	7mer-m8	64155204	64155227	150.00	-18.02
CAediting_1049012	chr15_64155246_+	ENSG00000157734.12	ENST00000325881	hsa-miR-662	64155241	64155246	6mer	64155225	64155247	149.00	-32.07
CAediting_1049012	chr15_64155246_+	ENSG00000157734.12	ENST00000325881	hsa-miR-663b	64155244	64155250	7mer-m8	64155228	64155251	150.00	-30.57
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-18a-3p	64155263	64155269	7mer-m8	64155248	64155270	140.00	-19.86
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4292	64155260	64155266	7mer-m8	64155250	64155267	158.00	-30.00
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6791-5p	64155260	64155266	7mer-m8	64155246	64155267	161.00	-34.44
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-874-3p	64155262	64155268	7mer-m8	64155248	64155269	167.00	-33.36
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-939-3p	64155259	64155265	7mer-m8	64155246	64155266	145.00	-23.53
CAediting_1049016	chr15_64155283_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5695	64155278	64155284	7mer-m8	64155265	64155285	158.00	-17.53
CAediting_1049017	chr15_64155284_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3176	64155282	64155288	7mer-m8	64155270	64155289	143.00	-15.79
CAediting_1049017	chr15_64155284_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3922-3p	64155282	64155288	7mer-m8	64155269	64155289	154.00	-19.48
CAediting_1049017	chr15_64155284_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6878-3p	64155281	64155287	7mer-m8	64155266	64155288	150.00	-27.88
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-331-3p	64155285	64155291	7mer-m8	64155272	64155292	140.00	-16.85
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4313	64155287	64155293	7mer-m8	64155275	64155294	164.00	-25.55
CAediting_1049021	chr15_64155308_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6075	64155305	64155312	8mer-1a	64155291	64155312	146.00	-20.49
CAediting_1049022	chr15_64155315_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6790-3p	64155310	64155316	7mer-m8	64155298	64155317	157.00	-27.82
CAediting_1049023	chr15_64155333_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4743-5p	64155329	64155335	7mer-m8	64155314	64155336	147.00	-23.99
CAediting_1049024	chr15_64155342_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3655	64155340	64155347	8mer-1a	64155329	64155347	155.00	-23.97
CAediting_1049026	chr15_64155346_+	ENSG00000157734.12	ENST00000325881	hsa-miR-367-5p	64155339	64155345	7mer-m8	64155325	64155346	143.00	-12.08
CAediting_1049026	chr15_64155346_+	ENSG00000157734.12	ENST00000325881	hsa-miR-483-3p	64155344	64155351	8mer-1a	64155331	64155351	151.00	-19.76
CAediting_1049027	chr15_64155348_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6780b-3p	64155342	64155348	7mer-m8	64155329	64155349	145.00	-15.72
CAediting_1049028	chr15_64155354_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6837-3p	64155347	64155353	7mer-m8	64155328	64155354	146.00	-17.88
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1225-3p	64155403	64155410	8mer-1a	64155389	64155410	162.00	-30.98
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-210-5p	64155401	64155407	7mer-m8	64155387	64155408	160.00	-26.81
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6769a-3p	64155402	64155408	7mer-m8	64155386	64155409	146.00	-25.87
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6801-3p	64155400	64155406	7mer-m8	64155388	64155407	159.00	-29.78
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6810-3p	64155400	64155406	7mer-m8	64155385	64155407	152.00	-23.02
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000558466	hsa-miR-1225-3p	64155404	64155410	7mer-1a	64155390	64155410	162.00	-30.98
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64155413	64155419	7mer-m8	64155403	64155420	152.00	-16.07
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-513a-5p	64155413	64155419	7mer-m8	64155403	64155420	152.00	-16.07
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-638	64155418	64155424	7mer-1a	64155400	64155424	152.00	-33.40
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-513a-5p	64155413	64155419	7mer-m8	64155403	64155420	152.00	-16.07
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-513a-5p	64155413	64155419	7mer-m8	64155403	64155420	152.00	-16.07
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-638	64155418	64155424	7mer-1a	64155400	64155424	152.00	-33.40
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1278	64155423	64155429	7mer-m8	64155409	64155430	147.00	-10.94
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6506-5p	64155419	64155425	7mer-m8	64155404	64155426	144.00	-17.78
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000558466	hsa-miR-1278	64155423	64155429	7mer-m8	64155409	64155430	147.00	-10.94
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6506-5p	64155419	64155425	7mer-m8	64155404	64155426	144.00	-17.78
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3176	64155472	64155478	7mer-m8	64155461	64155479	161.00	-26.24
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3922-3p	64155472	64155478	7mer-m8	64155454	64155479	157.00	-20.89
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6878-3p	64155471	64155477	7mer-m8	64155458	64155478	148.00	-24.32
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3176	64155472	64155478	7mer-m8	64155461	64155479	161.00	-26.24
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3922-3p	64155472	64155478	7mer-m8	64155454	64155479	157.00	-20.89
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6878-3p	64155471	64155477	7mer-m8	64155458	64155478	148.00	-24.32
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3195	64155479	64155486	8mer-1a	64155470	64155486	140.00	-19.17
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3195	64155479	64155486	8mer-1a	64155470	64155486	140.00	-19.17
CAediting_1049043	chr15_64155488_+	ENSG00000157734.12	ENST00000325881	hsa-miR-191-3p	64155481	64155487	7mer-m8	64155465	64155488	148.00	-22.85
CAediting_1049043	chr15_64155488_+	ENSG00000157734.12	ENST00000558466	hsa-miR-191-3p	64155481	64155487	7mer-m8	64155465	64155488	148.00	-22.85

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1048943	chr15_64154782_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64154777	64154783	7mer-m8	64154763	64154784	144	-11.88
CAediting_1048944	chr15_64154783_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64154777	64154783	7mer-m8	64154763	64154784	144	-11.88
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64154914	64154920	7mer-m8	64154900	64154921	148	-10.96
CAediting_1048972	chr15_64154920_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64154914	64154920	7mer-m8	64154900	64154921	148	-10.96
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64155414	64155420	7mer-m8	64155398	64155421	148	-13.05
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000325881	hsa-miR-10399-5p	64155414	64155420	7mer-m8	64155398	64155421	148	-13.05
CAediting_1048948	chr15_64154818_+	ENSG00000157734.12	ENST00000325881	hsa-miR-125a-3p	64154815	64154822	8mer-1a	64154801	64154822	140	-18.57
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1281	64155288	64155294	7mer-m8	64155279	64155295	147	-18.16
CAediting_1048946	chr15_64154799_+	ENSG00000157734.12	ENST00000325881	hsa-miR-150-5p	64154793	64154799	7mer-m8	64154779	64154800	140	-15.8
CAediting_1048957	chr15_64154861_+	ENSG00000157734.12	ENST00000325881	hsa-miR-193b-5p	64154859	64154865	7mer-m8	64154845	64154866	141	-19.57
CAediting_1048958	chr15_64154862_+	ENSG00000157734.12	ENST00000325881	hsa-miR-193b-5p	64154859	64154865	7mer-m8	64154845	64154866	141	-19.57
CAediting_1049040	chr15_64155446_+	ENSG00000157734.12	ENST00000325881	hsa-miR-1976	64155443	64155449	7mer-m8	64155430	64155450	153	-26.54
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-2114-3p	64155403	64155410	8mer-1a	64155391	64155410	143	-15.74
CAediting_1049038	chr15_64155441_+	ENSG00000157734.12	ENST00000325881	hsa-miR-212-5p	64155437	64155443	7mer-m8	64155420	64155444	154	-16.79
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000325881	hsa-miR-212-5p	64155437	64155443	7mer-m8	64155420	64155444	154	-16.79
CAediting_1048986	chr15_64155067_+	ENSG00000157734.12	ENST00000325881	hsa-miR-219b-3p	64155064	64155070	7mer-m8	64155051	64155071	153	-15.53
CAediting_1048986	chr15_64155067_+	ENSG00000157734.12	ENST00000325881	hsa-miR-302f	64155063	64155069	7mer-m8	64155054	64155070	145	-8.09
CAediting_1048941	chr15_64154756_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3064-5p	64154754	64154760	7mer-m8	64154741	64154761	141	-14.54
CAediting_1048942	chr15_64154760_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3064-5p	64154754	64154760	7mer-m8	64154741	64154761	141	-14.54
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3064-5p	64155476	64155482	7mer-m8	64155463	64155483	144	-12.65
CAediting_1048941	chr15_64154756_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3085-3p	64154754	64154760	7mer-m8	64154740	64154761	141	-19.29
CAediting_1048942	chr15_64154760_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3085-3p	64154754	64154760	7mer-m8	64154740	64154761	141	-19.29
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3085-3p	64155476	64155482	7mer-m8	64155463	64155483	144	-14.58
CAediting_1049031	chr15_64155403_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3130-3p	64155397	64155404	8mer-1a	64155386	64155404	147	-19.5
CAediting_1049031	chr15_64155403_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3130-3p	64155397	64155404	8mer-1a	64155386	64155404	147	-19.5
CAediting_1049006	chr15_64155206_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3165	64155201	64155207	7mer-m8	64155189	64155208	152	-19.82
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3189-3p	64155260	64155266	7mer-m8	64155247	64155267	155	-23.37
CAediting_1049002	chr15_64155172_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3190-5p	64155166	64155172	7mer-m8	64155154	64155173	147	-18.19
CAediting_1048956	chr15_64154848_+	ENSG00000157734.12	ENST00000325881	hsa-miR-323a-5p	64154846	64154853	8mer-1a	64154829	64154853	147	-23.81
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-340-3p	64154980	64154987	8mer-1a	64154966	64154987	146	-18.22
CAediting_1048977	chr15_64154984_+	ENSG00000157734.12	ENST00000325881	hsa-miR-340-3p	64154980	64154987	8mer-1a	64154966	64154987	146	-18.22
CAediting_1049005	chr15_64155197_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3622a-3p	64155194	64155201	8mer-1a	64155180	64155201	152	-17.26
CAediting_1049005	chr15_64155197_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3622b-3p	64155194	64155201	8mer-1a	64155181	64155201	145	-16.34
CAediting_1049023	chr15_64155333_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3652	64155329	64155335	7mer-m8	64155317	64155336	148	-20.61
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3663-5p	64154836	64154842	7mer-m8	64154824	64154843	148	-21.98
CAediting_1048955	chr15_64154842_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3663-5p	64154836	64154842	7mer-m8	64154824	64154843	148	-21.98
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3663-5p	64155472	64155478	7mer-m8	64155459	64155479	140	-20.32
CAediting_1048997	chr15_64155147_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3675-3p	64155145	64155151	7mer-m8	64155131	64155152	145	-12.58
CAediting_1048998	chr15_64155149_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3675-3p	64155145	64155151	7mer-m8	64155131	64155152	145	-12.58
CAediting_1048999	chr15_64155151_+	ENSG00000157734.12	ENST00000325881	hsa-miR-3675-3p	64155145	64155151	7mer-m8	64155131	64155152	145	-12.58
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-371b-5p	64154976	64154983	8mer-1a	64154962	64154983	146	-7.79
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-373-5p	64154976	64154983	8mer-1a	64154962	64154983	142	-8.35
CAediting_1049012	chr15_64155246_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4284	64155242	64155249	8mer-1a	64155232	64155249	143	-16.81
CAediting_1049021	chr15_64155308_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4284	64155304	64155310	7mer-m8	64155294	64155311	146	-13.9
CAediting_1048987	chr15_64155081_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4478	64155078	64155084	7mer-m8	64155070	64155085	149	-25.05
CAediting_1049007	chr15_64155223_+	ENSG00000157734.12	ENST00000325881	hsa-miR-450a-1-3p	64155217	64155224	8mer-1a	64155203	64155224	140	-10.62
CAediting_1049008	chr15_64155224_+	ENSG00000157734.12	ENST00000325881	hsa-miR-450a-1-3p	64155217	64155224	8mer-1a	64155203	64155224	140	-10.62
CAediting_1048987	chr15_64155081_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4649-3p	64155075	64155081	7mer-m8	64155062	64155082	140	-14.11
CAediting_1048952	chr15_64154831_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4680-5p	64154829	64154834	6mer	64154815	64154835	141	-15.58
CAediting_1048968	chr15_64154886_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4735-5p	64154884	64154890	7mer-m8	64154870	64154891	140	-5.19
CAediting_1048969	chr15_64154887_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4735-5p	64154884	64154890	7mer-m8	64154870	64154891	140	-5.19
CAediting_1048970	chr15_64154890_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4735-5p	64154884	64154890	7mer-m8	64154870	64154891	140	-5.19
CAediting_1049031	chr15_64155403_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4793-3p	64155398	64155404	7mer-1a	64155384	64155404	140	-24.35
CAediting_1048944	chr15_64154783_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64154781	64154787	7mer-m8	64154769	64154788	146	-13.24
CAediting_1048945	chr15_64154788_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64154781	64154787	7mer-m8	64154769	64154788	146	-13.24
CAediting_1048972	chr15_64154920_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64154918	64154924	7mer-m8	64154905	64154925	152	-18.63
CAediting_1048973	chr15_64154925_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64154918	64154924	7mer-m8	64154905	64154925	152	-18.63
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64155418	64155425	8mer-1a	64155406	64155425	146	-13.81
CAediting_1049035	chr15_64155425_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5089-5p	64155418	64155425	8mer-1a	64155406	64155425	146	-13.81
CAediting_1048945	chr15_64154788_+	ENSG00000157734.12	ENST00000325881	hsa-miR-512-3p	64154786	64154792	7mer-m8	64154772	64154793	149	-15
CAediting_1048945	chr15_64154788_+	ENSG00000157734.12	ENST00000325881	hsa-miR-512-3p	64154786	64154792	7mer-m8	64154772	64154793	149	-15
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-514b-5p	64154978	64154983	6mer	64154963	64154984	146	-12.74
CAediting_1048977	chr15_64154984_+	ENSG00000157734.12	ENST00000325881	hsa-miR-514b-5p	64154978	64154983	6mer	64154963	64154984	146	-12.74
CAediting_1049002	chr15_64155172_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548s	64155165	64155171	7mer-m8	64155150	64155172	140	-13.34
CAediting_1048989	chr15_64155093_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5690	64155090	64155096	7mer-m8	64155077	64155097	145	-16.75
CAediting_1049023	chr15_64155333_+	ENSG00000157734.12	ENST00000325881	hsa-miR-5787	64155330	64155335	6mer	64155316	64155336	145	-27.69
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6131	64154837	64154843	7mer-m8	64154826	64154844	140	-18.33
CAediting_1048955	chr15_64154842_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6131	64154837	64154843	7mer-m8	64154826	64154844	140	-18.33
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6131	64155473	64155479	7mer-m8	64155462	64155480	140	-16.72
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-616-5p	64154976	64154983	8mer-1a	64154962	64154983	140	-5.71
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-635	64155259	64155265	7mer-m8	64155245	64155266	142	-14.8
CAediting_1048947	chr15_64154815_+	ENSG00000157734.12	ENST00000325881	hsa-miR-640	64154811	64154817	7mer-m8	64154796	64154818	150	-18.55
CAediting_1048948	chr15_64154818_+	ENSG00000157734.12	ENST00000325881	hsa-miR-640	64154811	64154817	7mer-m8	64154796	64154818	150	-18.55
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-3p	64154914	64154920	7mer-m8	64154900	64154921	146	-13.52
CAediting_1048972	chr15_64154920_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-3p	64154914	64154920	7mer-m8	64154900	64154921	146	-13.52
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-3p	64155414	64155420	7mer-m8	64155400	64155421	152	-13.39
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-3p	64155414	64155420	7mer-m8	64155400	64155421	152	-13.39
CAediting_1048941	chr15_64154756_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-5p	64154754	64154760	7mer-m8	64154742	64154761	142	-17.22
CAediting_1048942	chr15_64154760_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-5p	64154754	64154760	7mer-m8	64154742	64154761	142	-17.22
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6504-5p	64155476	64155482	7mer-m8	64155463	64155483	149	-14.97
CAediting_1048945	chr15_64154788_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6506-5p	64154782	64154788	7mer-m8	64154767	64154789	144	-16.21
CAediting_1048973	chr15_64154925_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6506-5p	64154919	64154925	7mer-m8	64154904	64154926	144	-16.07
CAediting_1048978	chr15_64155014_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6512-3p	64155007	64155014	8mer-1a	64154993	64155014	144	-17.33
CAediting_1049035	chr15_64155425_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6513-5p	64155419	64155425	7mer-m8	64155404	64155426	152	-17.34
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6513-5p	64155419	64155425	7mer-m8	64155404	64155426	152	-17.34
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-660-3p	64155286	64155292	7mer-m8	64155272	64155293	154	-18.19
CAediting_1048942	chr15_64154760_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6720-3p	64154758	64154764	7mer-m8	64154745	64154765	142	-20.74
CAediting_1048978	chr15_64155014_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6720-5p	64155007	64155014	8mer-1a	64154992	64155014	151	-22.21
CAediting_1049006	chr15_64155206_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6745	64155202	64155208	7mer-m8	64155185	64155209	142	-21.79
CAediting_1049040	chr15_64155446_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6747-3p	64155441	64155448	8mer-1a	64155426	64155448	153	-23.7
CAediting_1049006	chr15_64155206_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6756-5p	64155203	64155208	6mer	64155185	64155209	140	-25.84
CAediting_1049013	chr15_64155265_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6774-5p	64155259	64155265	7mer-m8	64155240	64155266	147	-21.07
CAediting_1048946	chr15_64154799_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6778-3p	64154795	64154801	7mer-m8	64154782	64154802	143	-13.97
CAediting_1049021	chr15_64155308_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6784-3p	64155303	64155308	6mer	64155287	64155309	147	-30.38
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6791-3p	64155287	64155293	7mer-m8	64155275	64155294	152	-23.41
CAediting_1049027	chr15_64155348_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6794-3p	64155345	64155352	8mer-1a	64155333	64155352	144	-13.38
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6823-3p	64155403	64155410	8mer-1a	64155390	64155410	155	-24.05
CAediting_1048976	chr15_64154982_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6827-3p	64154980	64154987	8mer-1a	64154967	64154987	140	-14.67
CAediting_1048977	chr15_64154984_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6827-3p	64154980	64154987	8mer-1a	64154967	64154987	140	-14.67
CAediting_1049018	chr15_64155291_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6829-3p	64155287	64155293	7mer-m8	64155279	64155294	141	-21.35
CAediting_1048959	chr15_64154873_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6832-5p	64154867	64154873	7mer-m8	64154852	64154874	142	-16.66
CAediting_1048941	chr15_64154756_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6842-3p	64154754	64154759	6mer	64154739	64154760	140	-18.56
CAediting_1048942	chr15_64154760_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6842-3p	64154754	64154759	6mer	64154739	64154760	140	-18.56
CAediting_1048953	chr15_64154837_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6843-3p	64154835	64154841	7mer-m8	64154823	64154842	152	-19.47
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6843-3p	64154835	64154841	7mer-m8	64154823	64154842	152	-19.47
CAediting_1048955	chr15_64154842_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6843-3p	64154835	64154841	7mer-m8	64154823	64154842	152	-19.47
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6843-3p	64155471	64155477	7mer-m8	64155458	64155478	146	-15.14
CAediting_1048953	chr15_64154837_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6848-3p	64154835	64154841	7mer-m8	64154825	64154842	142	-14.3
CAediting_1048954	chr15_64154839_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6848-3p	64154835	64154841	7mer-m8	64154825	64154842	142	-14.3
CAediting_1048955	chr15_64154842_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6848-3p	64154835	64154841	7mer-m8	64154825	64154842	142	-14.3
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6848-3p	64155471	64155477	7mer-m8	64155460	64155478	140	-19.76
CAediting_1048946	chr15_64154799_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6878-3p	64154797	64154804	8mer-1a	64154784	64154804	142	-14.14
CAediting_1049038	chr15_64155441_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6878-3p	64155434	64155441	8mer-1a	64155421	64155441	146	-14.29
CAediting_1048943	chr15_64154782_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7151-3p	64154775	64154782	8mer-1a	64154766	64154782	146	-17.62
CAediting_1048971	chr15_64154919_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7151-3p	64154912	64154919	8mer-1a	64154898	64154919	143	-13.64
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7151-3p	64155412	64155419	8mer-1a	64155403	64155419	146	-17.14
CAediting_1048987	chr15_64155081_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7160-5p	64155076	64155082	7mer-m8	64155063	64155083	147	-20.02
CAediting_1049019	chr15_64155297_+	ENSG00000157734.12	ENST00000325881	hsa-miR-718	64155291	64155297	7mer-m8	64155280	64155298	148	-27.31
CAediting_1049020	chr15_64155298_+	ENSG00000157734.12	ENST00000325881	hsa-miR-718	64155291	64155297	7mer-m8	64155280	64155298	148	-27.31
CAediting_1049024	chr15_64155342_+	ENSG00000157734.12	ENST00000325881	hsa-miR-744-3p	64155338	64155345	8mer-1a	64155324	64155345	140	-10.2
CAediting_1049025	chr15_64155343_+	ENSG00000157734.12	ENST00000325881	hsa-miR-744-3p	64155338	64155345	8mer-1a	64155324	64155345	140	-10.2
CAediting_1049010	chr15_64155234_+	ENSG00000157734.12	ENST00000325881	hsa-miR-7977	64155227	64155233	7mer-m8	64155217	64155234	140	-13.07
CAediting_1049006	chr15_64155206_+	ENSG00000157734.12	ENST00000325881	hsa-miR-8056	64155201	64155206	6mer	64155189	64155207	143	-19.92
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-10399-5p	64155414	64155420	7mer-m8	64155398	64155421	148	-13.05
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000558466	hsa-miR-10399-5p	64155414	64155420	7mer-m8	64155398	64155421	148	-13.05
CAediting_1049040	chr15_64155446_+	ENSG00000157734.12	ENST00000558466	hsa-miR-1976	64155443	64155449	7mer-m8	64155430	64155450	153	-26.54
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000558466	hsa-miR-2114-3p	64155404	64155410	7mer-1a	64155391	64155410	143	-15.74
CAediting_1049038	chr15_64155441_+	ENSG00000157734.12	ENST00000558466	hsa-miR-212-5p	64155437	64155443	7mer-m8	64155420	64155444	154	-16.79
CAediting_1049039	chr15_64155442_+	ENSG00000157734.12	ENST00000558466	hsa-miR-212-5p	64155437	64155443	7mer-m8	64155420	64155444	154	-16.79
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3064-5p	64155476	64155482	7mer-m8	64155463	64155483	144	-12.65
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3085-3p	64155476	64155482	7mer-m8	64155463	64155483	144	-14.58
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-3663-5p	64155472	64155478	7mer-m8	64155459	64155479	140	-20.32
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000558466	hsa-miR-5089-5p	64155418	64155425	8mer-1a	64155406	64155425	146	-13.81
CAediting_1049035	chr15_64155425_+	ENSG00000157734.12	ENST00000558466	hsa-miR-5089-5p	64155418	64155425	8mer-1a	64155406	64155425	146	-13.81
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6131	64155473	64155479	7mer-m8	64155462	64155480	140	-16.72
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6504-3p	64155414	64155420	7mer-m8	64155400	64155421	152	-13.39
CAediting_1049034	chr15_64155420_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6504-3p	64155414	64155420	7mer-m8	64155400	64155421	152	-13.39
CAediting_1049042	chr15_64155482_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6504-5p	64155476	64155482	7mer-m8	64155463	64155483	149	-14.97
CAediting_1049035	chr15_64155425_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6513-5p	64155419	64155425	7mer-m8	64155404	64155426	152	-17.34
CAediting_1049036	chr15_64155426_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6513-5p	64155419	64155425	7mer-m8	64155404	64155426	152	-17.34
CAediting_1049040	chr15_64155446_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6747-3p	64155441	64155448	8mer-1a	64155426	64155448	153	-23.7
CAediting_1049032	chr15_64155405_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6823-3p	64155404	64155410	7mer-1a	64155390	64155410	155	-24.05
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6843-3p	64155471	64155477	7mer-m8	64155458	64155478	146	-15.14
CAediting_1049041	chr15_64155475_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6848-3p	64155471	64155477	7mer-m8	64155460	64155478	140	-19.76
CAediting_1049038	chr15_64155441_+	ENSG00000157734.12	ENST00000558466	hsa-miR-6878-3p	64155434	64155441	8mer-1a	64155421	64155441	146	-14.29
CAediting_1049033	chr15_64155419_+	ENSG00000157734.12	ENST00000558466	hsa-miR-7151-3p	64155412	64155419	8mer-1a	64155403	64155419	146	-17.14

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000157734.12	ENST00000325881	hsa-miR-605-3p	64156726	64156732	7mer-m8	64156712	64156733	155	-20.49
CAediting_1054808	chr15_66496985_-	ENSG00000157734.12	ENST00000325881	hsa-miR-4512	64156207	64156214	8mer-1a	64156193	64156214	144	-20.04
CAediting_1229414	chr17_67471546_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548aa	64155175	64155181	7mer-m8	64155158	64155182	140	-12.74
CAediting_1229415	chr17_67471547_+	ENSG00000157734.12	ENST00000325881	hsa-miR-548aa	64157165	64157171	7mer-m8	64157146	64157172	169	-18.98
CAediting_86358	chr1_109598906_+	ENSG00000157734.12	ENST00000325881	hsa-miR-197-5p	64155202	64155208	7mer-m8	64155187	64155209	140	-24.5
CAediting_77128	chr1_85133844_+	ENSG00000157734.12	ENST00000325881	hsa-miR-4423-3p	64154618	64154624	7mer-m8	64154605	64154625	140	-12.68
CAediting_228905	chr2_188297554_+	ENSG00000157734.12	ENST00000325881	hsa-miR-561-3p	64157282	64157287	6mer	64157266	64157288	140	-16.65
CAediting_580943	chr7_100356700_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6840-3p	64155052	64155058	7mer-m8	64155041	64155059	143	-30.6
CAediting_77128	chr1_85133844_+	ENSG00000157734.12	ENST00000558466	hsa-miR-4423-3p	64154618	64154624	7mer-m8	64154605	64154625	140	-12.68

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_580943	chr7_100356700_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6840-3p	64155673	64155679	7mer-m8	64155671	64155691	150	-24.96
CAediting_580943	chr7_100356700_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6840-3p	64155684	64155690	7mer-m8	64155671	64155691	150	-24.96
CAediting_580943	chr7_100356700_+	ENSG00000157734.12	ENST00000325881	hsa-miR-6840-3p	64156907	64156914	8mer-1a	64156893	64156914	140	-19.7
CAediting_468389	chr6_31355314_-	ENSG00000157734.12	ENST00000558466	hsa-miR-6891-5p	64154583	64154589	7mer-m8	64154572	64154590	141	-15.66

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for SNX22

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for SNX22

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1048944	chr15_64154783_+	1.77983510930805e-05	0.416750299491963	.	.	.	.
THCA	CAediting_1048944	chr15_64154783_+	0.00012888776188139	0.270096990402326	.	.	.	.
LGG	CAediting_1048954	chr15_64154839_+	0.0494666358563615	0.227681576948229	.	.	.	.
PRAD	CAediting_1048955	chr15_64154842_+	.	.	0.0153446522281605	0.331413930314197	.	.
THCA	CAediting_1048955	chr15_64154842_+	.	.	0.00110565555507333	0.33480962621604	.	.
SKCM	CAediting_1048955	chr15_64154842_+	.	.	0.00769511082381308	0.369070733839984	.	.
THCA	CAediting_1048959	chr15_64154873_+	0.00130463272164038	0.147251007903852	.	.	.	.
LGG	CAediting_1048960	chr15_64154876_+	0.000150034652193399	0.177583791585802	.	.	0.0138195080640329	0.115858226556321
BRCA	CAediting_1048960	chr15_64154876_+	0.00115262892356039	0.264641073496771	.	.	.	.
LIHC	CAediting_1048960	chr15_64154876_+	0.0248223998673674	0.287193547125803	.	.	.	.
GBM	CAediting_1048960	chr15_64154876_+	0.00955108276184251	0.289915754119015	.	.	.	.
PRAD	CAediting_1048960	chr15_64154876_+	0.0117062443240283	0.229446444649434	.	.	.	.
THCA	CAediting_1048960	chr15_64154876_+	1.35334374420733e-15	0.350665469857392	.	.	.	.
SKCM	CAediting_1048960	chr15_64154876_+	1.54146912807676e-06	0.463458950880441	.	.	.	.
LGG	CAediting_1048961	chr15_64154877_+	0.000633160655337951	0.16065719259517	.	.	0.0475504324838799	0.0935619726545722
BRCA	CAediting_1048961	chr15_64154877_+	0.003705456176239	0.236369954253901	.	.	.	.
LIHC	CAediting_1048961	chr15_64154877_+	0.043801014568358	0.256943971401637	.	.	.	.
THCA	CAediting_1048961	chr15_64154877_+	1.72300177114688e-17	0.372297227275968	.	.	.	.
SKCM	CAediting_1048961	chr15_64154877_+	4.716337096035e-06	0.437686013230436	.	.	.	.
LGG	CAediting_1048965	chr15_64154882_+	8.42493607864822e-06	0.209157078415849	.	.	.	.
BRCA	CAediting_1048965	chr15_64154882_+	0.000250698407197544	0.282242115961403	.	.	.	.
LIHC	CAediting_1048965	chr15_64154882_+	0.000793855529877108	0.411990619823978	.	.	.	.
GBM	CAediting_1048965	chr15_64154882_+	0.00199443873186587	0.351371476067676	.	.	.	.
THCA	CAediting_1048965	chr15_64154882_+	2.54337078296532e-15	0.34745232402691	.	.	.	.
SKCM	CAediting_1048965	chr15_64154882_+	3.20407452465205e-05	0.406956954733229	.	.	.	.
PRAD	CAediting_1048970	chr15_64154890_+	0.0429784561309106	0.290364908749229	.	.	.	.
LGG	CAediting_1048971	chr15_64154919_+	3.28550686063164e-05	0.429634859373012	.	.	.	.
BRCA	CAediting_1048971	chr15_64154919_+	2.77306048114682e-06	0.362960029507381	.	.	.	.
LIHC	CAediting_1048971	chr15_64154919_+	0.00129554092991939	0.390614347671974	.	.	.	.
SKCM	CAediting_1048971	chr15_64154919_+	2.02620127756442e-05	0.465123760879573	.	.	.	.
BRCA	CAediting_1048972	chr15_64154920_+	0.000660995658621572	0.338131700221606	.	.	.	.
LGG	CAediting_1048974	chr15_64154929_+	2.66750243014215e-08	0.279083713480508	.	.	.	.
BRCA	CAediting_1048974	chr15_64154929_+	2.63141119382001e-07	0.368586782385817	.	.	.	.
LIHC	CAediting_1048974	chr15_64154929_+	0.0180398468891836	0.297123975533892	.	.	.	.
PRAD	CAediting_1048974	chr15_64154929_+	0.00721708632343137	0.242101217984097	.	.	.	.
THCA	CAediting_1048974	chr15_64154929_+	3.38995452038439e-06	0.209575778543662	.	.	.	.
SKCM	CAediting_1048974	chr15_64154929_+	0.000250048778851502	0.35847799999825	.	.	.	.
THCA	CAediting_1048977	chr15_64154984_+	0.000279515207384353	0.195583914737918	.	.	.	.
LGG	CAediting_1048979	chr15_64155015_+	0.0150665109030173	0.320520852432656	.	.	.	.
THCA	CAediting_1048979	chr15_64155015_+	0.00896472970331392	0.240631120467863	.	.	.	.
LGG	CAediting_1048980	chr15_64155020_+	0.000378682161450425	0.223085369958785	.	.	.	.
THCA	CAediting_1048980	chr15_64155020_+	0.00739356055339794	0.1521077722525	.	.	.	.
SKCM	CAediting_1048980	chr15_64155020_+	0.00374694491106767	0.384544083658898	.	.	.	.
LGG	CAediting_1048981	chr15_64155025_+	.	.	0.0170359945838616	0.252367430450004	.	.
LGG	CAediting_1048987	chr15_64155081_+	0.00148175484741308	0.186766808175498	.	.	.	.
THCA	CAediting_1048987	chr15_64155081_+	2.55596382229964e-11	0.314036723775351	.	.	.	.
SKCM	CAediting_1048987	chr15_64155081_+	0.000350423765319844	0.420986562590233	.	.	.	.
LGG	CAediting_1048989	chr15_64155093_+	.	.	0.0127249852724995	0.12191369226453	.	.
PRAD	CAediting_1048989	chr15_64155093_+	6.09032419055655e-06	0.41984558398083	.	.	.	.
THCA	CAediting_1048989	chr15_64155093_+	1.44271361874812e-13	0.327227820341439	.	.	.	.
SKCM	CAediting_1048989	chr15_64155093_+	0.0313728994905512	0.225822045990564	.	.	.	.
LGG	CAediting_1048990	chr15_64155103_+	0.0026912006899209	0.142416671522404	0.000288018574139687	0.171667994625448	.	.
PRAD	CAediting_1048990	chr15_64155103_+	0.0251261445559435	0.193440876257876	.	.	.	.
THCA	CAediting_1048990	chr15_64155103_+	7.10402715374178e-15	0.340501550272658	.	.	.	.
SKCM	CAediting_1048990	chr15_64155103_+	0.0103719625985287	0.252771897562075	.	.	.	.
THCA	CAediting_1048994	chr15_64155138_+	0.0234241782215053	0.152775867183584	.	.	.	.
LGG	CAediting_1048995	chr15_64155144_+	.	.	0.0171572132368094	0.174586253726087	.	.
THCA	CAediting_1048995	chr15_64155144_+	1.22351442138485e-05	0.221696344712231	.	.	.	.
BRCA	CAediting_1048996	chr15_64155145_+	.	.	.	.	0.0469587301848593	0.245476981522929
GBM	CAediting_1048996	chr15_64155145_+	0.0106334956029514	0.333039187679647	.	.	.	.
THCA	CAediting_1048996	chr15_64155145_+	0.0208201239927358	0.107160381657124	.	.	.	.
SKCM	CAediting_1048996	chr15_64155145_+	.	.	0.0333931969336575	0.284783295849313	.	.
GBM	CAediting_1048997	chr15_64155147_+	0.0159159594009209	0.29353474161565	.	.	.	.
THCA	CAediting_1048997	chr15_64155147_+	1.92394880549212e-05	0.193913155811393	.	.	.	.
LGG	CAediting_1049002	chr15_64155172_+	0.00125514038069289	0.180416302097631	0.00771990514797427	0.149379346669372	.	.
THCA	CAediting_1049002	chr15_64155172_+	0.000300909055835742	0.181620081837387	.	.	.	.
SKCM	CAediting_1049002	chr15_64155172_+	.	.	0.0158239089809636	0.321097262128815	.	.
LGG	CAediting_1049003	chr15_64155185_+	.	.	0.0382715246615935	0.197854025865788	.	.
PRAD	CAediting_1049003	chr15_64155185_+	.	.	0.00336602758731463	0.299463966734089	.	.
SKCM	CAediting_1049003	chr15_64155185_+	.	.	0.000108614431532862	0.478868453871685	.	.
LGG	CAediting_1049005	chr15_64155197_+	0.00547510087127472	0.224272423969131	.	.	.	.
BRCA	CAediting_1049005	chr15_64155197_+	2.39284970925413e-05	0.429533544307372	.	.	.	.
THCA	CAediting_1049005	chr15_64155197_+	0.00793308642429664	0.143135025211241	.	.	.	.
BRCA	CAediting_1049008	chr15_64155224_+	0.00778012073643211	0.324873210838188	.	.	.	.
THCA	CAediting_1049008	chr15_64155224_+	0.00395007875270686	0.33337363402552	.	.	.	.
BRCA	CAediting_1049009	chr15_64155225_+	0.000693439307157991	0.35679077032972	.	.	.	.
PRAD	CAediting_1049009	chr15_64155225_+	.	.	0.010756295691383	0.324388392271331	.	.
THCA	CAediting_1049009	chr15_64155225_+	0.000426412852076657	0.316618777794445	.	.	.	.
LGG	CAediting_1049011	chr15_64155237_+	1.94093071683059e-07	0.24106524572032	.	.	.	.
BRCA	CAediting_1049011	chr15_64155237_+	2.05943816500358e-10	0.400998658067131	.	.	.	.
LIHC	CAediting_1049011	chr15_64155237_+	9.13070397553955e-06	0.421743746519591	.	.	.	.
GBM	CAediting_1049011	chr15_64155237_+	0.00135836585131799	0.350036932568178	.	.	.	.
PRAD	CAediting_1049011	chr15_64155237_+	0.0129525080998467	0.166187871154785	.	.	.	.
THCA	CAediting_1049011	chr15_64155237_+	2.34060654985336e-16	0.359413892150726	.	.	.	.
SKCM	CAediting_1049011	chr15_64155237_+	0.0245345776946564	0.209642280570619	0.00243362718417878	0.280066087399427	.	.
LGG	CAediting_1049020	chr15_64155298_+	0.0137605037035795	0.245646858068434	.	.	.	.
THCA	CAediting_1049020	chr15_64155298_+	0.0418527433344407	0.159108603726913	.	.	.	.
BRCA	CAediting_1049026	chr15_64155346_+	0.042308499800789	0.265264439444666	.	.	.	.
THCA	CAediting_1049026	chr15_64155346_+	4.88317147762121e-05	0.378758748631006	.	.	.	.
LGG	CAediting_1049037	chr15_64155433_+	3.81923001824141e-15	0.399429440454371	.	.	.	.
BRCA	CAediting_1049037	chr15_64155433_+	1.44521604059481e-09	0.315342199161367	.	.	.	.
LIHC	CAediting_1049037	chr15_64155433_+	2.67687025791214e-05	0.351760596912756	.	.	.	.
LUAD	CAediting_1049037	chr15_64155433_+	0.00925997998855185	0.333301485500441	.	.	.	.
GBM	CAediting_1049037	chr15_64155433_+	0.00863612764006338	0.305260338326633	.	.	.	.
PRAD	CAediting_1049037	chr15_64155433_+	8.06671050344597e-05	0.234208305254377	.	.	.	.
THCA	CAediting_1049037	chr15_64155433_+	4.0774237892454e-08	0.244743578479864	.	.	.	.
SKCM	CAediting_1049037	chr15_64155433_+	0.00100298524263003	0.278041439507681	.	.	.	.
LGG	CAediting_1049038	chr15_64155441_+	0.00651285278288058	0.228131967829389	.	.	.	.
BRCA	CAediting_1049038	chr15_64155441_+	0.0201580072954999	0.177562479264773	.	.	.	.
LIHC	CAediting_1049038	chr15_64155441_+	0.0252019541413444	0.296340586229361	.	.	.	.
THCA	CAediting_1049038	chr15_64155441_+	0.000785117208204214	0.384438098819121	.	.	.	.
LGG	CAediting_1049039	chr15_64155442_+	0.00148299628758943	0.155894046415332	0.0210813504660666	0.113473756906182	0.00588959312185998	0.135295346357056
BRCA	CAediting_1049039	chr15_64155442_+	1.07147689014554e-06	0.291218220545088	.	.	.	.
LIHC	CAediting_1049039	chr15_64155442_+	0.0108555377021279	0.260273687837321	.	.	.	.
PRAD	CAediting_1049039	chr15_64155442_+	0.0128123393495088	0.192820109107551	.	.	.	.
THCA	CAediting_1049039	chr15_64155442_+	5.62917955599417e-05	0.218222105843542	.	.	.	.
THYM	CAediting_1049039	chr15_64155442_+	0.0266898950249255	0.290984362540645	.	.	.	.
BRCA	CAediting_1049044	chr15_64155490_+	0.0186155520825815	0.233801447684858	.	.	.	.

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Relation with cancer stages for SNX22

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1048997	chr15_64155147_+	0.0408326824638148	-0.219761385036221
BRCA	pathologic_stage	CAediting_1049002	chr15_64155172_+	0.0474315613434654	0.225209004187148
SKCM	pathologic_stage	CAediting_1048961	chr15_64154877_+	0.0286241170079246	-0.237498485864247
SKCM	pathologic_stage	CAediting_1048962	chr15_64154878_+	0.0204457876293335	-0.352459278614826
THCA	pathologic_stage	CAediting_1048944	chr15_64154783_+	0.00342678881702161	0.208609322097121
THCA	pathologic_stage	CAediting_1048965	chr15_64154882_+	0.0289670124973289	0.0991786979524618
THCA	pathologic_stage	CAediting_1048977	chr15_64154984_+	0.0151578348578405	0.132008101630907
THCA	pathologic_stage	CAediting_1048980	chr15_64155020_+	0.014046297019492	0.140055491851892
THCA	pathologic_stage	CAediting_1048981	chr15_64155025_+	0.0276448236316345	0.168938402739893
THCA	pathologic_stage	CAediting_1048987	chr15_64155081_+	0.0328513461117999	0.103292858391288
THCA	pathologic_stage	CAediting_1048992	chr15_64155129_+	0.0410799473817056	0.228943545528405
THCA	pathologic_stage	CAediting_1048994	chr15_64155138_+	0.0143919068604148	0.16518290594585
THCA	pathologic_stage	CAediting_1048996	chr15_64155145_+	0.0357770096886575	0.0978122389423506
THCA	pathologic_stage	CAediting_1048997	chr15_64155147_+	0.0331031236098693	0.0977924138247529
THCA	pathologic_stage	CAediting_1049002	chr15_64155172_+	0.00622641818475884	0.138655647022464
THCA	pathologic_stage	CAediting_1049020	chr15_64155298_+	0.000745793352022186	0.26231855008189
THCA	pathologic_stage	CAediting_1049037	chr15_64155433_+	0.00956341884087171	0.117435912900675
THCA	pathologic_stage	CAediting_1049039	chr15_64155442_+	0.0312936642219846	0.118209895625248

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Relation with survival for SNX22

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
BRCA	CAediting_1048959	chr15_64154873_+	0.00431098302441213	0.00670503	52108600
LIHC	CAediting_1049011	chr15_64155237_+	0.0237344718299886	0.0340919	18.6549
THCA	CAediting_1048965	chr15_64154882_+	0.0311995380945361	0.00333552	37862.3
SKCM	CAediting_1049039	chr15_64155442_+	0.000715518361462886	0.0239184	0.00647622

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RelatedDrugs for SNX22

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for SNX22

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene