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Editing gene: HAND2-AS1 (CAeditome ID:79804)

Gene summary for HAND2-AS1

Gene summary

Gene information	Gene symbol	HAND2-AS1
	Gene ID	79804
	Gene name	HAND2 antisense RNA 1
	Synonyms	DEIN\|NBLA00301\|UPH
	Cytomap	4q34.1
	Type of gene	ncRNA
	Description	HAND2 antisense RNA 1 (head to head)differentially expressed in neuroblastomaneuroblastoma transcript 301
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for HAND2-AS1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000237125.7

RNA A-to-I editing events in Cancer.

CAediting_393476(173544946, +), CAediting_393477(173544986, +), CAediting_393478(173544987, +), CAediting_393479(173544988, +), CAediting_393480(173544991, +), CAediting_393481(173544992, +), CAediting_393482(173544999, +), CAediting_393483(173545000, +), CAediting_393484(173545022, +), CAediting_393485(173545517, +), CAediting_393486(173545551, +), CAediting_393487(173545552, +), CAediting_393488(173545554, +), CAediting_393489(173545556, +), CAediting_393490(173545559, +), CAediting_393491(173545595, +), CAediting_393492(173563258, +), CAediting_393493(173563301, +), CAediting_393494(173563323, +), CAediting_393495(173563373, +), CAediting_393496(173563384, +), CAediting_393497(173563664, +), CAediting_393498(173583122, +), CAediting_393499(173583190, +), CAediting_393500(173583200, +), CAediting_393501(173583214, +), CAediting_393502(173583215, +), CAediting_393503(173583216, +), CAediting_393504(173583217, +), CAediting_393505(173583220, +), CAediting_393506(173583227, +), CAediting_393507(173583230, +), CAediting_393508(173583262, +), CAediting_393509(173583266, +), CAediting_393510(173583279, +), CAediting_393511(173583298, +), CAediting_393512(173583327, +), CAediting_393513(173583366, +), CAediting_393514(173583407, +), CAediting_393515(173583439, +), CAediting_393516(173583460, +), CAediting_393517(173583466, +), CAediting_393518(173583475, +), CAediting_393519(173583495, +), CAediting_393520(173583499, +), CAediting_393521(173583504, +), CAediting_393522(173583514, +), CAediting_393523(173583984, +), CAediting_393524(173583990, +), CAediting_393525(173584028, +), CAediting_393526(173584052, +), CAediting_393527(173584062, +), CAediting_393528(173584076, +), CAediting_393529(173584077, +), CAediting_393530(173584081, +), CAediting_393531(173584083, +), CAediting_393532(173584084, +), CAediting_393533(173584085, +), CAediting_393534(173584091, +), CAediting_393535(173584101, +), CAediting_393536(173584104, +), CAediting_393537(173584107, +), CAediting_393538(173584117, +), CAediting_393539(173584123, +), CAediting_393540(173584127, +), CAediting_393541(173584140, +), CAediting_393542(173584144, +), CAediting_393543(173584158, +), CAediting_393544(173584159, +), CAediting_393545(173584179, +), CAediting_393546(173584188, +), CAediting_393547(173584190, +), CAediting_393548(173584198, +), CAediting_393549(173584203, +), CAediting_393550(173585233, +), CAediting_393551(173585237, +), CAediting_393552(173585257, +), CAediting_393553(173585283, +), CAediting_393554(173585284, +), CAediting_393555(173585287, +), CAediting_393556(173585292, +), CAediting_393557(173585299, +), CAediting_393558(173585306, +), CAediting_393559(173585313, +), CAediting_393560(173585317, +), CAediting_393561(173585323, +), CAediting_393562(173585330, +), CAediting_393563(173585342, +), CAediting_393564(173585352, +), CAediting_393565(173585362, +), CAediting_393566(173585365, +), CAediting_393567(173585378, +), CAediting_393568(173585389, +), CAediting_393569(173585395, +), CAediting_393570(173585398, +), CAediting_393571(173585400, +), CAediting_393572(173585405, +), CAediting_393573(173585406, +), CAediting_393574(173585415, +), CAediting_393575(173585435, +), CAediting_393576(173585436, +), CAediting_393577(173585437, +), CAediting_393578(173585450, +), CAediting_393579(173585454, +), CAediting_393580(173585475, +), CAediting_393581(173585491, +), CAediting_393582(173585615, +), CAediting_393583(173585617, +), CAediting_393584(173585627, +), CAediting_393585(173585634, +), CAediting_393586(173585650, +), CAediting_393587(173585655, +), CAediting_393588(173585656, +), CAediting_393589(173585662, +), CAediting_393590(173585663, +), CAediting_393591(173585673, +), CAediting_393592(173585681, +), CAediting_393593(173585687, +), CAediting_393594(173585705, +), CAediting_393595(173587081, +), CAediting_393596(173587119, +), CAediting_393597(173587124, +), CAediting_393598(173587137, +), CAediting_393599(173587162, +), CAediting_393600(173587163, +), CAediting_393601(173587167, +), CAediting_393602(173587180, +), CAediting_393603(173587193, +), CAediting_393604(173587197, +), CAediting_393605(173587203, +), CAediting_393606(173587209, +), CAediting_393607(173587216, +), CAediting_393608(173587219, +), CAediting_393609(173587243, +), CAediting_393610(173587246, +), CAediting_393611(173587249, +), CAediting_393612(173587251, +), CAediting_393613(173587263, +),

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RNA editing positional annotations for HAND2-AS1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_393476	chr4_173544946_+	ncRNA_intronic
CAediting_393477	chr4_173544986_+	ncRNA_intronic
CAediting_393478	chr4_173544987_+	ncRNA_intronic
CAediting_393479	chr4_173544988_+	ncRNA_intronic
CAediting_393480	chr4_173544991_+	ncRNA_intronic
CAediting_393481	chr4_173544992_+	ncRNA_intronic
CAediting_393482	chr4_173544999_+	ncRNA_intronic
CAediting_393483	chr4_173545000_+	ncRNA_intronic
CAediting_393484	chr4_173545022_+	ncRNA_intronic
CAediting_393485	chr4_173545517_+	ncRNA_intronic
CAediting_393486	chr4_173545551_+	ncRNA_intronic
CAediting_393487	chr4_173545552_+	ncRNA_intronic
CAediting_393488	chr4_173545554_+	ncRNA_intronic
CAediting_393489	chr4_173545556_+	ncRNA_intronic
CAediting_393490	chr4_173545559_+	ncRNA_intronic
CAediting_393491	chr4_173545595_+	ncRNA_intronic
CAediting_393492	chr4_173563258_+	ncRNA_intronic
CAediting_393493	chr4_173563301_+	ncRNA_intronic
CAediting_393494	chr4_173563323_+	ncRNA_intronic
CAediting_393495	chr4_173563373_+	ncRNA_intronic
CAediting_393496	chr4_173563384_+	ncRNA_intronic
CAediting_393497	chr4_173563664_+	ncRNA_intronic
CAediting_393498	chr4_173583122_+	ncRNA_exonic
CAediting_393499	chr4_173583190_+	ncRNA_exonic
CAediting_393500	chr4_173583200_+	ncRNA_exonic
CAediting_393501	chr4_173583214_+	ncRNA_exonic
CAediting_393502	chr4_173583215_+	ncRNA_exonic
CAediting_393503	chr4_173583216_+	ncRNA_exonic
CAediting_393504	chr4_173583217_+	ncRNA_exonic
CAediting_393505	chr4_173583220_+	ncRNA_exonic
CAediting_393506	chr4_173583227_+	ncRNA_exonic
CAediting_393507	chr4_173583230_+	ncRNA_exonic
CAediting_393508	chr4_173583262_+	ncRNA_exonic
CAediting_393509	chr4_173583266_+	ncRNA_exonic
CAediting_393510	chr4_173583279_+	ncRNA_exonic
CAediting_393511	chr4_173583298_+	ncRNA_exonic
CAediting_393512	chr4_173583327_+	ncRNA_exonic
CAediting_393513	chr4_173583366_+	ncRNA_exonic
CAediting_393514	chr4_173583407_+	ncRNA_intronic
CAediting_393515	chr4_173583439_+	ncRNA_intronic
CAediting_393516	chr4_173583460_+	ncRNA_intronic
CAediting_393517	chr4_173583466_+	ncRNA_intronic
CAediting_393518	chr4_173583475_+	ncRNA_intronic
CAediting_393519	chr4_173583495_+	ncRNA_intronic
CAediting_393520	chr4_173583499_+	ncRNA_intronic
CAediting_393521	chr4_173583504_+	ncRNA_intronic
CAediting_393522	chr4_173583514_+	ncRNA_intronic
CAediting_393523	chr4_173583984_+	ncRNA_intronic
CAediting_393524	chr4_173583990_+	ncRNA_intronic
CAediting_393525	chr4_173584028_+	ncRNA_intronic
CAediting_393526	chr4_173584052_+	ncRNA_intronic
CAediting_393527	chr4_173584062_+	ncRNA_intronic
CAediting_393528	chr4_173584076_+	ncRNA_intronic
CAediting_393529	chr4_173584077_+	ncRNA_intronic
CAediting_393530	chr4_173584081_+	ncRNA_intronic
CAediting_393531	chr4_173584083_+	ncRNA_intronic
CAediting_393532	chr4_173584084_+	ncRNA_intronic
CAediting_393533	chr4_173584085_+	ncRNA_intronic
CAediting_393534	chr4_173584091_+	ncRNA_intronic
CAediting_393535	chr4_173584101_+	ncRNA_intronic
CAediting_393536	chr4_173584104_+	ncRNA_intronic
CAediting_393537	chr4_173584107_+	ncRNA_intronic
CAediting_393538	chr4_173584117_+	ncRNA_intronic
CAediting_393539	chr4_173584123_+	ncRNA_intronic
CAediting_393540	chr4_173584127_+	ncRNA_intronic
CAediting_393541	chr4_173584140_+	ncRNA_intronic
CAediting_393542	chr4_173584144_+	ncRNA_intronic
CAediting_393543	chr4_173584158_+	ncRNA_intronic
CAediting_393544	chr4_173584159_+	ncRNA_intronic
CAediting_393545	chr4_173584179_+	ncRNA_intronic
CAediting_393546	chr4_173584188_+	ncRNA_intronic
CAediting_393547	chr4_173584190_+	ncRNA_intronic
CAediting_393548	chr4_173584198_+	ncRNA_intronic
CAediting_393549	chr4_173584203_+	ncRNA_intronic
CAediting_393550	chr4_173585233_+	ncRNA_exonic
CAediting_393551	chr4_173585237_+	ncRNA_exonic
CAediting_393552	chr4_173585257_+	ncRNA_exonic
CAediting_393553	chr4_173585283_+	ncRNA_exonic
CAediting_393554	chr4_173585284_+	ncRNA_exonic
CAediting_393555	chr4_173585287_+	ncRNA_exonic
CAediting_393556	chr4_173585292_+	ncRNA_exonic
CAediting_393557	chr4_173585299_+	ncRNA_exonic
CAediting_393558	chr4_173585306_+	ncRNA_exonic
CAediting_393559	chr4_173585313_+	ncRNA_exonic
CAediting_393560	chr4_173585317_+	ncRNA_exonic
CAediting_393561	chr4_173585323_+	ncRNA_exonic
CAediting_393562	chr4_173585330_+	ncRNA_exonic
CAediting_393563	chr4_173585342_+	ncRNA_exonic
CAediting_393564	chr4_173585352_+	ncRNA_exonic
CAediting_393565	chr4_173585362_+	ncRNA_exonic
CAediting_393566	chr4_173585365_+	ncRNA_exonic
CAediting_393567	chr4_173585378_+	ncRNA_exonic
CAediting_393568	chr4_173585389_+	ncRNA_exonic
CAediting_393569	chr4_173585395_+	ncRNA_exonic
CAediting_393570	chr4_173585398_+	ncRNA_exonic
CAediting_393571	chr4_173585400_+	ncRNA_exonic
CAediting_393572	chr4_173585405_+	ncRNA_exonic
CAediting_393573	chr4_173585406_+	ncRNA_exonic
CAediting_393574	chr4_173585415_+	ncRNA_exonic
CAediting_393575	chr4_173585435_+	ncRNA_exonic
CAediting_393576	chr4_173585436_+	ncRNA_exonic
CAediting_393577	chr4_173585437_+	ncRNA_exonic
CAediting_393578	chr4_173585450_+	ncRNA_exonic
CAediting_393579	chr4_173585454_+	ncRNA_exonic
CAediting_393580	chr4_173585475_+	ncRNA_exonic
CAediting_393581	chr4_173585491_+	ncRNA_exonic
CAediting_393582	chr4_173585615_+	ncRNA_exonic
CAediting_393583	chr4_173585617_+	ncRNA_exonic
CAediting_393584	chr4_173585627_+	ncRNA_exonic
CAediting_393585	chr4_173585634_+	ncRNA_exonic
CAediting_393586	chr4_173585650_+	ncRNA_exonic
CAediting_393587	chr4_173585655_+	ncRNA_exonic
CAediting_393588	chr4_173585656_+	ncRNA_exonic
CAediting_393589	chr4_173585662_+	ncRNA_exonic
CAediting_393590	chr4_173585663_+	ncRNA_exonic
CAediting_393591	chr4_173585673_+	ncRNA_exonic
CAediting_393592	chr4_173585681_+	ncRNA_exonic
CAediting_393593	chr4_173585687_+	ncRNA_exonic
CAediting_393594	chr4_173585705_+	ncRNA_exonic
CAediting_393595	chr4_173587081_+	ncRNA_intronic
CAediting_393596	chr4_173587119_+	ncRNA_intronic
CAediting_393597	chr4_173587124_+	ncRNA_intronic
CAediting_393598	chr4_173587137_+	ncRNA_intronic
CAediting_393599	chr4_173587162_+	ncRNA_intronic
CAediting_393600	chr4_173587163_+	ncRNA_intronic
CAediting_393601	chr4_173587167_+	ncRNA_intronic
CAediting_393602	chr4_173587180_+	ncRNA_intronic
CAediting_393603	chr4_173587193_+	ncRNA_intronic
CAediting_393604	chr4_173587197_+	ncRNA_intronic
CAediting_393605	chr4_173587203_+	ncRNA_intronic
CAediting_393606	chr4_173587209_+	ncRNA_intronic
CAediting_393607	chr4_173587216_+	ncRNA_intronic
CAediting_393608	chr4_173587219_+	ncRNA_intronic
CAediting_393609	chr4_173587243_+	ncRNA_intronic
CAediting_393610	chr4_173587246_+	ncRNA_intronic
CAediting_393611	chr4_173587249_+	ncRNA_intronic
CAediting_393612	chr4_173587251_+	ncRNA_intronic
CAediting_393613	chr4_173587263_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_393477	chr4_173544986_+	LINE	L1	L1MD
CAediting_393478	chr4_173544987_+	LINE	L1	L1MD
CAediting_393479	chr4_173544988_+	LINE	L1	L1MD
CAediting_393480	chr4_173544991_+	LINE	L1	L1MD
CAediting_393481	chr4_173544992_+	LINE	L1	L1MD
CAediting_393482	chr4_173544999_+	LINE	L1	L1MD
CAediting_393483	chr4_173545000_+	LINE	L1	L1MD
CAediting_393484	chr4_173545022_+	LINE	L1	L1MD
CAediting_393485	chr4_173545517_+	LINE	L1	L1MD1
CAediting_393486	chr4_173545551_+	LINE	L1	L1MD1
CAediting_393487	chr4_173545552_+	LINE	L1	L1MD1
CAediting_393488	chr4_173545554_+	LINE	L1	L1MD1
CAediting_393489	chr4_173545556_+	LINE	L1	L1MD1
CAediting_393490	chr4_173545559_+	LINE	L1	L1MD1
CAediting_393491	chr4_173545595_+	LINE	L1	L1MD1
CAediting_393492	chr4_173563258_+	SINE	Alu	AluSz6
CAediting_393493	chr4_173563301_+	SINE	Alu	AluSz6
CAediting_393494	chr4_173563323_+	SINE	Alu	AluSz6
CAediting_393495	chr4_173563373_+	SINE	Alu	AluSz6
CAediting_393496	chr4_173563384_+	SINE	Alu	AluSz6
CAediting_393497	chr4_173563664_+	SINE	Alu	AluSg4
CAediting_393498	chr4_173583122_+	SINE	Alu	AluY
CAediting_393499	chr4_173583190_+	SINE	Alu	AluY
CAediting_393500	chr4_173583200_+	SINE	Alu	AluY
CAediting_393501	chr4_173583214_+	SINE	Alu	AluY
CAediting_393502	chr4_173583215_+	SINE	Alu	AluY
CAediting_393503	chr4_173583216_+	SINE	Alu	AluY
CAediting_393504	chr4_173583217_+	SINE	Alu	AluY
CAediting_393505	chr4_173583220_+	SINE	Alu	AluY
CAediting_393506	chr4_173583227_+	SINE	Alu	AluY
CAediting_393507	chr4_173583230_+	SINE	Alu	AluY
CAediting_393508	chr4_173583262_+	SINE	Alu	AluY
CAediting_393509	chr4_173583266_+	SINE	Alu	AluY
CAediting_393510	chr4_173583279_+	SINE	Alu	AluY
CAediting_393511	chr4_173583298_+	SINE	Alu	AluY
CAediting_393512	chr4_173583327_+	SINE	Alu	AluY
CAediting_393513	chr4_173583366_+	SINE	Alu	AluY
CAediting_393514	chr4_173583407_+	SINE	Alu	AluYc
CAediting_393515	chr4_173583439_+	SINE	Alu	AluYc
CAediting_393516	chr4_173583460_+	SINE	Alu	AluYc
CAediting_393517	chr4_173583466_+	SINE	Alu	AluYc
CAediting_393518	chr4_173583475_+	SINE	Alu	AluYc
CAediting_393519	chr4_173583495_+	SINE	Alu	AluYc
CAediting_393520	chr4_173583499_+	SINE	Alu	AluYc
CAediting_393521	chr4_173583504_+	SINE	Alu	AluYc
CAediting_393522	chr4_173583514_+	SINE	Alu	AluYc
CAediting_393523	chr4_173583984_+	SINE	Alu	AluSc8
CAediting_393524	chr4_173583990_+	SINE	Alu	AluSc8
CAediting_393525	chr4_173584028_+	SINE	Alu	AluSc8
CAediting_393526	chr4_173584052_+	SINE	Alu	AluSc8
CAediting_393527	chr4_173584062_+	SINE	Alu	AluSc8
CAediting_393528	chr4_173584076_+	SINE	Alu	AluSc8
CAediting_393529	chr4_173584077_+	SINE	Alu	AluSc8
CAediting_393530	chr4_173584081_+	SINE	Alu	AluSc8
CAediting_393531	chr4_173584083_+	SINE	Alu	AluSc8
CAediting_393532	chr4_173584084_+	SINE	Alu	AluSc8
CAediting_393533	chr4_173584085_+	SINE	Alu	AluSc8
CAediting_393534	chr4_173584091_+	SINE	Alu	AluSc8
CAediting_393535	chr4_173584101_+	SINE	Alu	AluSc8
CAediting_393536	chr4_173584104_+	SINE	Alu	AluSc8
CAediting_393537	chr4_173584107_+	SINE	Alu	AluSc8
CAediting_393538	chr4_173584117_+	SINE	Alu	AluSc8
CAediting_393539	chr4_173584123_+	SINE	Alu	AluSc8
CAediting_393540	chr4_173584127_+	SINE	Alu	AluSc8
CAediting_393541	chr4_173584140_+	SINE	Alu	AluSc8
CAediting_393542	chr4_173584144_+	SINE	Alu	AluSc8
CAediting_393543	chr4_173584158_+	SINE	Alu	AluSc8
CAediting_393544	chr4_173584159_+	SINE	Alu	AluSc8
CAediting_393545	chr4_173584179_+	SINE	Alu	AluSc8
CAediting_393546	chr4_173584188_+	SINE	Alu	AluSc8
CAediting_393547	chr4_173584190_+	SINE	Alu	AluSc8
CAediting_393548	chr4_173584198_+	SINE	Alu	AluSc8
CAediting_393549	chr4_173584203_+	SINE	Alu	AluSc8
CAediting_393550	chr4_173585233_+	SINE	Alu	AluSz6
CAediting_393551	chr4_173585237_+	SINE	Alu	AluSz6
CAediting_393552	chr4_173585257_+	SINE	Alu	AluSz6
CAediting_393553	chr4_173585283_+	SINE	Alu	AluSz6
CAediting_393554	chr4_173585284_+	SINE	Alu	AluSz6
CAediting_393555	chr4_173585287_+	SINE	Alu	AluSz6
CAediting_393556	chr4_173585292_+	SINE	Alu	AluSz6
CAediting_393557	chr4_173585299_+	SINE	Alu	AluSz6
CAediting_393558	chr4_173585306_+	SINE	Alu	AluSz6
CAediting_393559	chr4_173585313_+	SINE	Alu	AluSz6
CAediting_393560	chr4_173585317_+	SINE	Alu	AluSz6
CAediting_393561	chr4_173585323_+	SINE	Alu	AluSz6
CAediting_393562	chr4_173585330_+	SINE	Alu	AluSz6
CAediting_393563	chr4_173585342_+	SINE	Alu	AluSz6
CAediting_393564	chr4_173585352_+	SINE	Alu	AluSz6
CAediting_393565	chr4_173585362_+	SINE	Alu	AluSz6
CAediting_393566	chr4_173585365_+	SINE	Alu	AluSz6
CAediting_393567	chr4_173585378_+	SINE	Alu	AluSz6
CAediting_393568	chr4_173585389_+	SINE	Alu	AluSz6
CAediting_393569	chr4_173585395_+	SINE	Alu	AluSz6
CAediting_393570	chr4_173585398_+	SINE	Alu	AluSz6
CAediting_393571	chr4_173585400_+	SINE	Alu	AluSz6
CAediting_393572	chr4_173585405_+	SINE	Alu	AluSz6
CAediting_393573	chr4_173585406_+	SINE	Alu	AluSz6
CAediting_393574	chr4_173585415_+	SINE	Alu	AluSz6
CAediting_393575	chr4_173585435_+	SINE	Alu	AluSz6
CAediting_393576	chr4_173585436_+	SINE	Alu	AluSz6
CAediting_393577	chr4_173585437_+	SINE	Alu	AluSz6
CAediting_393578	chr4_173585450_+	SINE	Alu	AluSz6
CAediting_393579	chr4_173585454_+	SINE	Alu	AluSz6
CAediting_393580	chr4_173585475_+	SINE	Alu	AluSz6
CAediting_393581	chr4_173585491_+	SINE	Alu	AluSz6
CAediting_393582	chr4_173585615_+	SINE	Alu	FLAM_C
CAediting_393583	chr4_173585617_+	SINE	Alu	FLAM_C
CAediting_393584	chr4_173585627_+	SINE	Alu	FLAM_C
CAediting_393585	chr4_173585634_+	SINE	Alu	FLAM_C
CAediting_393586	chr4_173585650_+	SINE	Alu	FLAM_C
CAediting_393587	chr4_173585655_+	SINE	Alu	FLAM_C
CAediting_393588	chr4_173585656_+	SINE	Alu	FLAM_C
CAediting_393589	chr4_173585662_+	SINE	Alu	FLAM_C
CAediting_393590	chr4_173585663_+	SINE	Alu	FLAM_C
CAediting_393591	chr4_173585673_+	SINE	Alu	FLAM_C
CAediting_393592	chr4_173585681_+	SINE	Alu	FLAM_C
CAediting_393593	chr4_173585687_+	SINE	Alu	FLAM_C
CAediting_393594	chr4_173585705_+	SINE	Alu	FLAM_C
CAediting_393595	chr4_173587081_+	SINE	Alu	AluSp
CAediting_393596	chr4_173587119_+	SINE	Alu	AluSp
CAediting_393597	chr4_173587124_+	SINE	Alu	AluSp
CAediting_393598	chr4_173587137_+	SINE	Alu	AluSp
CAediting_393599	chr4_173587162_+	SINE	Alu	AluSp
CAediting_393600	chr4_173587163_+	SINE	Alu	AluSp
CAediting_393601	chr4_173587167_+	SINE	Alu	AluSp
CAediting_393602	chr4_173587180_+	SINE	Alu	AluSp
CAediting_393603	chr4_173587193_+	SINE	Alu	AluSp
CAediting_393604	chr4_173587197_+	SINE	Alu	AluSp
CAediting_393605	chr4_173587203_+	SINE	Alu	AluSp
CAediting_393606	chr4_173587209_+	SINE	Alu	AluSp
CAediting_393607	chr4_173587216_+	SINE	Alu	AluSp
CAediting_393608	chr4_173587219_+	SINE	Alu	AluSp
CAediting_393609	chr4_173587243_+	SINE	Alu	AluSp
CAediting_393610	chr4_173587246_+	SINE	Alu	AluSp
CAediting_393611	chr4_173587249_+	SINE	Alu	AluSp
CAediting_393612	chr4_173587251_+	SINE	Alu	AluSp
CAediting_393613	chr4_173587263_+	SINE	Alu	AluSp

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RNA A-to-I editing events in the alternative splicing sites for HAND2-AS1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000237125.7.HAND2-AS1.

Correlation between RNA A-to-I editing and PSI for ENSG00000237125.7.HAND2-AS1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for HAND2-AS1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for HAND2-AS1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for HAND2-AS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393552	chr4_173585257_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3940-3p	173585255	173585261	7mer-m8	173585241	173585262	151	-22.47
CAediting_393573	chr4_173585406_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6072	173585401	173585407	7mer-m8	173585386	173585408	151	-15.6
CAediting_393573	chr4_173585406_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6891-3p	173585401	173585407	7mer-m8	173585388	173585408	146	-12.88
CAediting_393588	chr4_173585656_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3176	173585650	173585656	7mer-m8	173585639	173585657	140	-16.47
CAediting_393588	chr4_173585656_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3620-3p	173585654	173585660	7mer-m8	173585639	173585661	146	-21.5
CAediting_393588	chr4_173585656_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3922-3p	173585650	173585656	7mer-m8	173585636	173585657	141	-18.35
CAediting_393589	chr4_173585662_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1224-3p	173585656	173585663	8mer-1a	173585642	173585663	156	-27.6
CAediting_393589	chr4_173585662_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1260a	173585657	173585663	7mer-m8	173585647	173585664	156	-22.12
CAediting_393589	chr4_173585662_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1260b	173585657	173585663	7mer-m8	173585646	173585664	148	-18.2
CAediting_393589	chr4_173585662_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-532-3p	173585658	173585664	7mer-m8	173585647	173585665	143	-18.76
CAediting_393591	chr4_173585673_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-328-3p	173585673	173585678	6mer	173585658	173585679	144	-26.61
CAediting_393591	chr4_173585673_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-5699-5p	173585670	173585676	7mer-m8	173585657	173585677	144	-14.1
CAediting_393591	chr4_173585673_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-874-5p	173585671	173585678	8mer-1a	173585656	173585678	140	-18.64
CAediting_393594	chr4_173585705_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4716-5p	173585700	173585706	7mer-m8	173585686	173585707	155	-19.18
CAediting_393498	chr4_173583122_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-513a-5p	173583117	173583123	7mer-m8	173583107	173583124	152	-17.32
CAediting_393498	chr4_173583122_+	ENSG00000237125.7	ENST00000514431.4	hsa-miR-513a-5p	173583117	173583123	7mer-m8	173583107	173583124	152	-17.32
CAediting_393500	chr4_173583200_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-412-3p	173583194	173583200	7mer-m8	173583179	173583201	151	-19.78
CAediting_393500	chr4_173583200_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4508	173583199	173583205	7mer-m8	173583191	173583206	141	-24.29
CAediting_393500	chr4_173583200_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6754-3p	173583194	173583200	7mer-m8	173583181	173583201	146	-16.46
CAediting_393501	chr4_173583214_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-222-5p	173583209	173583216	8mer-1a	173583195	173583216	140	-9.13
CAediting_393501	chr4_173583214_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-30a-3p	173583211	173583218	8mer-1a	173583194	173583218	150	-12.52
CAediting_393501	chr4_173583214_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-30d-3p	173583211	173583218	8mer-1a	173583196	173583218	149	-12.11
CAediting_393501	chr4_173583214_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-30e-3p	173583211	173583218	8mer-1a	173583194	173583218	150	-14.55
CAediting_393501	chr4_173583214_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-936	173583208	173583215	8mer-1a	173583193	173583215	159	-22.47
CAediting_393502	chr4_173583215_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-325	173583209	173583216	8mer-1a	173583194	173583216	141	-10.26
CAediting_393503	chr4_173583216_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-630	173583215	173583222	8mer-1a	173583202	173583222	158	-15.14
CAediting_393505	chr4_173583220_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-153-5p	173583214	173583220	7mer-m8	173583199	173583221	144	-8.17
CAediting_393505	chr4_173583220_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-3680-3p	173583218	173583225	8mer-1a	173583203	173583225	140	-14.25
CAediting_393509	chr4_173583266_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-3692-5p	173583260	173583266	7mer-m8	173583239	173583267	143	-21.86
CAediting_393509	chr4_173583266_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-558	173583263	173583269	7mer-m8	173583251	173583270	152	-18.59
CAediting_393510	chr4_173583279_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-1913	173583278	173583284	7mer-m8	173583258	173583285	153	-28.56
CAediting_393510	chr4_173583279_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6849-3p	173583273	173583279	7mer-m8	173583259	173583280	140	-15.93
CAediting_393511	chr4_173583298_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4284	173583294	173583300	7mer-m8	173583284	173583301	148	-20.34
CAediting_393511	chr4_173583298_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4437	173583295	173583301	7mer-m8	173583282	173583302	145	-18.43
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-2114-3p	173583363	173583369	7mer-m8	173583350	173583370	140	-13.79
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6778-3p	173583361	173583367	7mer-m8	173583348	173583368	146	-21.84
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6791-3p	173583362	173583367	6mer	173583346	173583368	142	-26.21
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6819-3p	173583363	173583368	6mer	173583349	173583369	142	-22.71
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6823-3p	173583363	173583369	7mer-m8	173583349	173583370	165	-29.19
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6829-3p	173583362	173583367	6mer	173583349	173583368	141	-23.31
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6877-3p	173583363	173583368	6mer	173583350	173583369	145	-20.71
CAediting_393550	chr4_173585233_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4433b-5p	173585231	173585237	7mer-m8	173585218	173585238	140	-10.81
CAediting_393551	chr4_173585237_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-340-3p	173585232	173585239	8mer-1a	173585218	173585239	149	-18.73
CAediting_393551	chr4_173585237_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6827-3p	173585232	173585239	8mer-1a	173585219	173585239	140	-14.67
CAediting_393554	chr4_173585284_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6842-3p	173585282	173585287	6mer	173585268	173585288	142	-23
CAediting_393554	chr4_173585284_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-7160-5p	173585280	173585285	6mer	173585264	173585286	141	-24.11
CAediting_393554	chr4_173585284_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-889-5p	173585282	173585288	7mer-m8	173585268	173585289	140	-16.35
CAediting_393557	chr4_173585299_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-25-5p	173585295	173585301	7mer-m8	173585285	173585302	150	-20.59
CAediting_393557	chr4_173585299_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-658	173585294	173585300	7mer-m8	173585276	173585301	146	-26.76
CAediting_393558	chr4_173585306_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1247-3p	173585302	173585308	7mer-m8	173585287	173585309	156	-22.3
CAediting_393558	chr4_173585306_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6746-5p	173585301	173585306	6mer	173585286	173585307	142	-30.69
CAediting_393559	chr4_173585313_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622a-3p	173585310	173585317	8mer-1a	173585295	173585317	146	-18.21
CAediting_393559	chr4_173585313_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622b-3p	173585310	173585317	8mer-1a	173585297	173585317	147	-19.15
CAediting_393559	chr4_173585313_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4539	173585308	173585313	6mer	173585295	173585314	145	-20.67
CAediting_393560	chr4_173585317_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1255b-2-3p	173585312	173585318	7mer-m8	173585298	173585319	140	-12.73
CAediting_393560	chr4_173585317_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-589-5p	173585316	173585323	8mer-1a	173585303	173585323	158	-22.66
CAediting_393561	chr4_173585323_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622a-5p	173585322	173585328	7mer-m8	173585309	173585329	162	-25.89
CAediting_393563	chr4_173585342_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4691-3p	173585340	173585346	7mer-m8	173585320	173585347	150	-28
CAediting_393565	chr4_173585362_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6722-5p	173585358	173585365	8mer-1a	173585346	173585365	140	-12.82
CAediting_393566	chr4_173585365_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4746-3p	173585360	173585366	7mer-m8	173585345	173585367	150	-20.03
CAediting_393567	chr4_173585378_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-34a-3p	173585375	173585382	8mer-1a	173585360	173585382	145	-11.2
CAediting_393568	chr4_173585389_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-641	173585388	173585393	6mer	173585369	173585394	150	-19.87
CAediting_393572	chr4_173585405_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-136-5p	173585402	173585407	6mer	173585386	173585408	153	-18.74
CAediting_393574	chr4_173585415_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4445-3p	173585410	173585416	7mer-m8	173585397	173585417	150	-17.88
CAediting_393574	chr4_173585415_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-548al	173585410	173585416	7mer-m8	173585397	173585417	153	-15
CAediting_393576	chr4_173585436_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4251	173585430	173585437	8mer-1a	173585418	173585437	150	-17.56
CAediting_393577	chr4_173585437_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4538	173585434	173585440	7mer-1a	173585418	173585440	143	-21.61
CAediting_393578	chr4_173585450_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622a-3p	173585447	173585454	8mer-1a	173585433	173585454	140	-16.49
CAediting_393578	chr4_173585450_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622b-3p	173585447	173585454	8mer-1a	173585435	173585454	151	-20.8
CAediting_393578	chr4_173585450_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4649-3p	173585444	173585450	7mer-m8	173585431	173585451	147	-19.41
CAediting_393578	chr4_173585450_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-544b	173585445	173585451	7mer-m8	173585432	173585452	148	-18.85
CAediting_393579	chr4_173585454_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1255b-2-3p	173585449	173585455	7mer-m8	173585435	173585456	140	-9.3
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4497	173585471	173585477	7mer-m8	173585463	173585478	153	-27.22
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-191-3p	173585613	173585618	6mer	173585598	173585619	144	-26.55
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6720-3p	173585610	173585617	8mer-1a	173585594	173585617	155	-20.42
CAediting_393585	chr4_173585634_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-8052	173585633	173585639	7mer-1a	173585621	173585639	140	-24.05
CAediting_393586	chr4_173585650_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4749-3p	173585647	173585653	7mer-m8	173585635	173585654	145	-18.6
CAediting_393586	chr4_173585650_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6887-3p	173585646	173585652	7mer-m8	173585633	173585653	145	-16.54
CAediting_393592	chr4_173585681_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-331-3p	173585676	173585682	7mer-m8	173585664	173585683	146	-21.45
CAediting_393593	chr4_173585687_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4281	173585685	173585692	8mer-1a	173585675	173585692	142	-21.92
CAediting_393593	chr4_173585687_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6716-3p	173585681	173585687	7mer-m8	173585669	173585688	148	-21.99

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393498	chr4_173583122_+	ENSG00000237125.7	ENST00000514431.4	hsa-miR-10399-5p	173583118	173583124	7mer-m8	173583104	173583125	144	-11.88
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1271-3p	173585610	173585617	8mer-1a	173585596	173585617	141	-15.87
CAediting_393579	chr4_173585454_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1288-5p	173585452	173585458	7mer-m8	173585437	173585459	140	-14.79
CAediting_393587	chr4_173585655_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-212-5p	173585652	173585658	7mer-m8	173585636	173585659	146	-18.28
CAediting_393588	chr4_173585656_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-212-5p	173585652	173585658	7mer-m8	173585636	173585659	146	-18.28
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-30b-3p	173585469	173585475	7mer-m8	173585455	173585476	151	-22.01
CAediting_393559	chr4_173585313_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3614-5p	173585311	173585317	7mer-1a	173585295	173585317	152	-23.09
CAediting_393561	chr4_173585323_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3622b-5p	173585322	173585327	6mer	173585310	173585328	141	-22.85
CAediting_393570	chr4_173585398_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3675-3p	173585397	173585403	7mer-m8	173585383	173585404	145	-12.85
CAediting_393571	chr4_173585400_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3675-3p	173585397	173585403	7mer-m8	173585383	173585404	145	-12.85
CAediting_393558	chr4_173585306_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3689a-3p	173585300	173585306	7mer-m8	173585287	173585307	154	-24.65
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3689a-3p	173585469	173585475	7mer-m8	173585456	173585476	143	-26.18
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3689b-3p	173585469	173585475	7mer-m8	173585456	173585476	143	-24.94
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3689c	173585469	173585475	7mer-m8	173585456	173585476	143	-24.94
CAediting_393550	chr4_173585233_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-371a-5p	173585228	173585235	8mer-1a	173585216	173585235	150	-14.85
CAediting_393591	chr4_173585673_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-372-5p	173585668	173585674	7mer-m8	173585653	173585675	145	-17.83
CAediting_393562	chr4_173585330_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-3929	173585328	173585334	7mer-m8	173585313	173585335	153	-23.19
CAediting_393583	chr4_173585617_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4252	173585616	173585622	7mer-m8	173585605	173585623	152	-17.33
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4314	173585471	173585477	7mer-m8	173585461	173585478	140	-16.5
CAediting_393569	chr4_173585395_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4509	173585391	173585396	6mer	173585376	173585397	145	-13.78
CAediting_393562	chr4_173585330_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4649-3p	173585325	173585331	7mer-m8	173585312	173585332	147	-14.24
CAediting_393574	chr4_173585415_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4717-3p	173585413	173585419	7mer-m8	173585399	173585420	142	-14.48
CAediting_393569	chr4_173585395_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4744	173585390	173585396	7mer-m8	173585376	173585397	143	-7.91
CAediting_393586	chr4_173585650_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4757-5p	173585648	173585655	8mer-1a	173585634	173585655	150	-18.36
CAediting_393550	chr4_173585233_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-514b-5p	173585230	173585235	6mer	173585214	173585236	146	-14.07
CAediting_393586	chr4_173585650_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-515-5p	173585644	173585650	7mer-m8	173585629	173585651	144	-13.32
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-550a-3-5p	173585610	173585617	8mer-1a	173585598	173585617	151	-15.68
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-550a-5p	173585610	173585617	8mer-1a	173585595	173585617	151	-18.03
CAediting_393573	chr4_173585406_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-5582-3p	173585405	173585411	7mer-m8	173585392	173585412	154	-11.24
CAediting_393563	chr4_173585342_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-5690	173585340	173585346	7mer-m8	173585327	173585347	145	-17.72
CAediting_393561	chr4_173585323_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-580-3p	173585317	173585323	7mer-m8	173585301	173585324	155	-14.68
CAediting_393583	chr4_173585617_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6529-3p	173585612	173585618	7mer-m8	173585597	173585619	147	-16.12
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6529-3p	173585612	173585618	7mer-m8	173585597	173585619	147	-16.12
CAediting_393552	chr4_173585257_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-661	173585254	173585260	7mer-m8	173585238	173585261	146	-20.28
CAediting_393586	chr4_173585650_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6744-3p	173585648	173585655	8mer-1a	173585633	173585655	151	-19.54
CAediting_393558	chr4_173585306_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6779-5p	173585300	173585306	7mer-m8	173585289	173585307	152	-25.71
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6779-5p	173585469	173585475	7mer-m8	173585458	173585476	144	-27.91
CAediting_393558	chr4_173585306_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6780a-5p	173585300	173585306	7mer-m8	173585282	173585307	146	-22.02
CAediting_393580	chr4_173585475_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6780a-5p	173585469	173585475	7mer-m8	173585453	173585476	148	-22.49
CAediting_393557	chr4_173585299_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6880-5p	173585295	173585301	7mer-m8	173585281	173585302	145	-20.6
CAediting_393562	chr4_173585330_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6884-5p	173585329	173585335	7mer-m8	173585313	173585336	153	-19.75
CAediting_393551	chr4_173585237_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6888-3p	173585233	173585239	7mer-m8	173585220	173585240	151	-14.42
CAediting_393583	chr4_173585617_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6889-3p	173585612	173585618	7mer-m8	173585600	173585619	140	-15.52
CAediting_393582	chr4_173585615_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-6889-3p	173585612	173585618	7mer-m8	173585600	173585619	140	-15.52
CAediting_393557	chr4_173585299_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-7847-3p	173585294	173585300	7mer-m8	173585281	173585301	145	-17.57
CAediting_393552	chr4_173585257_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-939-3p	173585253	173585259	7mer-m8	173585240	173585260	141	-15.42
CAediting_393574	chr4_173585415_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-942-3p	173585412	173585418	7mer-m8	173585399	173585419	152	-18.81
CAediting_393498	chr4_173583122_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-10399-5p	173583118	173583124	7mer-m8	173583104	173583125	144	-11.88
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-3198	173583365	173583371	7mer-m8	173583351	173583372	140	-13.26
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4294	173583364	173583371	8mer-1a	173583355	173583371	142	-14.59
CAediting_393513	chr4_173583366_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4309	173583365	173583371	7mer-m8	173583355	173583372	145	-15.22
CAediting_393506	chr4_173583227_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4735-5p	173583225	173583231	7mer-m8	173583211	173583232	140	-4.28
CAediting_393507	chr4_173583230_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-4735-5p	173583225	173583231	7mer-m8	173583211	173583232	140	-4.28
CAediting_393498	chr4_173583122_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-7151-3p	173583116	173583123	8mer-1a	173583107	173583123	146	-17.62

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000507571.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000502334.4	hsa-miR-27a-3p	173538308	173538314	7mer-m8	173538292	173538315	160	-22.62
CAediting_688080	chr9_63819626_+	ENSG00000237125.7	ENST00000502334.4	hsa-miR-4477b	173538608	173538614	7mer-m8	173538593	173538615	159	-13.28
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000508534.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-27a-3p	173538308	173538314	7mer-m8	173538292	173538315	160	-22.62
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_688080	chr9_63819626_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-4477b	173538608	173538614	7mer-m8	173538593	173538615	159	-13.28
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-27a-3p	173538308	173538314	7mer-m8	173538292	173538315	160	-22.62
CAediting_688080	chr9_63819626_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-4477b	173538608	173538614	7mer-m8	173538593	173538615	159	-13.28
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000510339.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-27a-3p	173538308	173538314	7mer-m8	173538292	173538315	160	-22.62
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_688080	chr9_63819626_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-4477b	173538608	173538614	7mer-m8	173538593	173538615	159	-13.28
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000515350.4	hsa-miR-200b-3p	173540704	173540710	7mer-m8	173540689	173540711	155	-11.72
CAediting_980496	chr14_31014685_-	ENSG00000237125.7	ENST00000512099.4	hsa-miR-624-3p	173527972	173527977	6mer	173527958	173527978	146	-22.64
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-27a-3p	173538308	173538314	7mer-m8	173538292	173538315	160	-22.62
CAediting_688080	chr9_63819626_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-4477b	173538608	173538614	7mer-m8	173538593	173538615	159	-13.28
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000515741.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507322.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000507322.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000510221.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507636.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000507571.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000507571.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000507571.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507571.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000508887.4	hsa-miR-3654	173537363	173537369	7mer-m8	173537351	173537370	144	-22.21
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000514431.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000509640.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000502334.4	hsa-miR-320e	173538453	173538459	7mer-m8	173538443	173538460	145	-16.4
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000502334.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000509866.4	hsa-miR-3654	173537363	173537369	7mer-m8	173536960	173537370	140	-19.08
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000515310.4	hsa-miR-320e	173528734	173528740	7mer-m8	173528726	173528741	141	-14.01
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000502941.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000511728.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000511728.4	hsa-miR-3654	173537363	173537369	7mer-m8	173536960	173537370	140	-19.08
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000503309.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000511196.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000508534.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000508534.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000508534.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000508534.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-320e	173538453	173538459	7mer-m8	173538443	173538460	145	-16.4
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1229413	chr17_67471544_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-548aa	173538040	173538046	7mer-m8	173538023	173538047	142	-9.6
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-320e	173538453	173538459	7mer-m8	173538443	173538460	145	-16.4
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-4423-3p	173537817	173537823	7mer-m8	173537804	173537824	159	-19.97
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-1303	173537721	173537727	7mer-m8	173537707	173537728	156	-18.14
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-3654	173537363	173537369	7mer-m8	173536960	173537370	140	-19.08
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000510339.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000510339.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000510339.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000510339.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1229413	chr17_67471544_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-548aa	173538040	173538046	7mer-m8	173538023	173538047	142	-9.6
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-320e	173538453	173538459	7mer-m8	173538443	173538460	145	-16.4
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-4423-3p	173537817	173537823	7mer-m8	173537804	173537824	159	-19.97
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-1303	173537721	173537727	7mer-m8	173537707	173537728	156	-18.14
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-3654	173537363	173537369	7mer-m8	173537351	173537370	144	-22.21
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000503474.4	hsa-miR-195-3p	173585105	173585112	8mer-1a	173585091	173585112	145	-12.08
CAediting_396018	chr5_1062918_-	ENSG00000237125.7	ENST00000503474.4	hsa-miR-4635	173585445	173585451	7mer-m8	173585432	173585452	158	-21.28
CAediting_524911	chr7_5495852_-	ENSG00000237125.7	ENST00000503474.4	hsa-miR-589-3p	173585244	173585250	7mer-m8	173585227	173585251	154	-15.49
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000515345.4	hsa-miR-3654	173537363	173537369	7mer-m8	173537351	173537370	144	-22.21
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000504740.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_1054808	chr15_66496985_-	ENSG00000237125.7	ENST00000515350.4	hsa-miR-4512	173539701	173539707	7mer-m8	173539685	173539708	143	-15.11
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000515350.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000515350.4	hsa-miR-4423-3p	173540716	173540722	7mer-m8	173540701	173540723	159	-18.78
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000515350.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1229413	chr17_67471544_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-548aa	173527702	173527708	7mer-m8	173527686	173527709	157	-16.38
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000512099.4	hsa-miR-320e	173527806	173527813	8mer-1a	173527794	173527813	154	-21.27
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-1303	173527826	173527831	6mer	173527811	173527832	140	-23.74
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000512246.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000505621.4	hsa-miR-195-3p	173541860	173541866	7mer-m8	173541845	173541867	145	-11.07
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000505621.4	hsa-miR-561-3p	173541725	173541731	7mer-m8	173541708	173541732	152	-14.22
CAediting_414656	chr5_72878640_+	ENSG00000237125.7	ENST00000505032.4	hsa-miR-4804-3p	173530926	173530932	7mer-m8	173530912	173530933	153	-17.93
CAediting_1229413	chr17_67471544_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-548aa	173538040	173538046	7mer-m8	173538023	173538047	142	-9.6
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-320e	173538453	173538459	7mer-m8	173538443	173538460	145	-16.4
CAediting_77128	chr1_85133844_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-4423-3p	173537817	173537823	7mer-m8	173537804	173537824	159	-19.97
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-1303	173537721	173537727	7mer-m8	173537707	173537728	156	-18.14
CAediting_604450	chr7_133034877_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-3654	173537363	173537369	7mer-m8	173536960	173537370	140	-19.08
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000508887.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000509866.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000511728.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000515345.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-6891-5p	173537380	173537386	7mer-m8	173537367	173537387	143	-18.8

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507322.4	hsa-miR-561-3p	173530887	173530893	7mer-m8	173530873	173530894	140	-10.5
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000507571.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000507571.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000508887.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000515376.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000502334.4	hsa-miR-320e	173538294	173538300	7mer-m8	173538284	173538301	140	-12.88
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000509866.4	hsa-miR-197-5p	173537625	173537631	7mer-m8	173537610	173537632	140	-15.06
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000503309.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000508534.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000508534.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-200b-3p	173538690	173538696	7mer-m8	173538675	173538697	151	-12.13
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-27a-3p	173541560	173541565	6mer	173541545	173541566	152	-19.41
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-27a-3p	173541604	173541610	7mer-m8	173541592	173541611	149	-12.82
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-320e	173539009	173539015	7mer-m8	173539001	173539016	145	-14.86
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000507062.4	hsa-miR-320e	173538294	173538300	7mer-m8	173538284	173538301	140	-12.88
CAediting_228905	chr2_188297554_+	ENSG00000237125.7	ENST00000507062.4	hsa-miR-561-3p	173530437	173530443	7mer-m8	173530422	173530444	145	-11.48
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000616485.3	hsa-miR-197-5p	173537625	173537631	7mer-m8	173537610	173537632	140	-15.06
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-320e	173538294	173538300	7mer-m8	173538284	173538301	140	-12.88
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000616485.3	hsa-miR-320e	173539009	173539015	7mer-m8	173539001	173539016	145	-14.86
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000510339.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000510339.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-197-5p	173537625	173537631	7mer-m8	173537610	173537632	140	-15.06
CAediting_393	chr1_1167164_+	ENSG00000237125.7	ENST00000502896.4	hsa-miR-200b-3p	173538690	173538696	7mer-m8	173538675	173538697	151	-12.13
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-27a-3p	173541560	173541565	6mer	173541545	173541566	152	-19.41
CAediting_1306324	chr19_13836464_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-27a-3p	173541604	173541610	7mer-m8	173541592	173541611	149	-12.82
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-320e	173538294	173538300	7mer-m8	173538284	173538301	140	-12.88
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000502896.4	hsa-miR-320e	173539009	173539015	7mer-m8	173539001	173539016	145	-14.86
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000503474.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000503474.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000515350.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000515350.4	hsa-miR-197-5p	173541182	173541187	6mer	173541182	173541204	140	-24.63
CAediting_1229413	chr17_67471544_+	ENSG00000237125.7	ENST00000512099.4	hsa-miR-548aa	173527330	173527336	7mer-m8	173527313	173527337	142	-8.37
CAediting_468389	chr6_31355314_-	ENSG00000237125.7	ENST00000512099.4	hsa-miR-6891-5p	173528272	173528278	7mer-m8	173528260	173528279	144	-19.44
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000512246.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_1160181	chr17_7017644_-	ENSG00000237125.7	ENST00000505621.4	hsa-miR-195-3p	173530517	173530524	8mer-1a	173530503	173530524	142	-7.13
CAediting_442554	chr5_154685830_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-1303	173530529	173530535	7mer-m8	173530515	173530536	140	-8.57
CAediting_86358	chr1_109598906_+	ENSG00000237125.7	ENST00000503198.4	hsa-miR-197-5p	173537625	173537631	7mer-m8	173537610	173537632	140	-15.06
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-320e	173538294	173538300	7mer-m8	173538284	173538301	140	-12.88
CAediting_1368054	chr19_46709310_-	ENSG00000237125.7	ENST00000503198.4	hsa-miR-320e	173539009	173539015	7mer-m8	173539001	173539016	145	-14.86

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for HAND2-AS1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000503474.4	antisense
ENST00000512099.4	antisense
ENST00000514431.4	antisense

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_393550	ENST00000503474.4	chr4_173585233_+	-546.10	-544.40	-596.70
CAediting_393551	ENST00000503474.4	chr4_173585237_+	-543.70	-544.40	-596.70
CAediting_393552	ENST00000503474.4	chr4_173585257_+	-545.00	-544.40	-596.70
CAediting_393553	ENST00000503474.4	chr4_173585283_+	-544.40	-544.40	-596.70
CAediting_393554	ENST00000503474.4	chr4_173585284_+	-545.20	-544.40	-596.70
CAediting_393555	ENST00000503474.4	chr4_173585287_+	-549.80	-544.40	-596.70
CAediting_393556	ENST00000503474.4	chr4_173585292_+	-543.70	-544.40	-596.70
CAediting_393557	ENST00000503474.4	chr4_173585299_+	-545.90	-544.40	-596.70
CAediting_393558	ENST00000503474.4	chr4_173585306_+	-545.30	-544.40	-596.70
CAediting_393559	ENST00000503474.4	chr4_173585313_+	-551.00	-544.40	-596.70
CAediting_393560	ENST00000503474.4	chr4_173585317_+	-546.70	-544.40	-596.70
CAediting_393561	ENST00000503474.4	chr4_173585323_+	-544.00	-544.40	-596.70
CAediting_393562	ENST00000503474.4	chr4_173585330_+	-543.70	-544.40	-596.70
CAediting_393563	ENST00000503474.4	chr4_173585342_+	-546.40	-544.40	-596.70
CAediting_393564	ENST00000503474.4	chr4_173585352_+	-547.00	-544.40	-596.70
CAediting_393565	ENST00000503474.4	chr4_173585362_+	-544.40	-544.40	-596.70
CAediting_393566	ENST00000503474.4	chr4_173585365_+	-544.30	-544.40	-596.70
CAediting_393567	ENST00000503474.4	chr4_173585378_+	-544.10	-544.40	-596.70
CAediting_393568	ENST00000503474.4	chr4_173585389_+	-545.70	-544.40	-596.70
CAediting_393569	ENST00000503474.4	chr4_173585395_+	-545.10	-544.40	-596.70
CAediting_393570	ENST00000503474.4	chr4_173585398_+	-544.10	-544.40	-596.70
CAediting_393571	ENST00000503474.4	chr4_173585400_+	-543.50	-544.40	-596.70
CAediting_393572	ENST00000503474.4	chr4_173585405_+	-543.60	-544.40	-596.70
CAediting_393573	ENST00000503474.4	chr4_173585406_+	-551.00	-544.40	-596.70
CAediting_393574	ENST00000503474.4	chr4_173585415_+	-544.70	-544.40	-596.70
CAediting_393575	ENST00000503474.4	chr4_173585435_+	-550.40	-544.40	-596.70
CAediting_393576	ENST00000503474.4	chr4_173585436_+	-544.70	-544.40	-596.70
CAediting_393577	ENST00000503474.4	chr4_173585437_+	-544.40	-544.40	-596.70
CAediting_393578	ENST00000503474.4	chr4_173585450_+	-544.00	-544.40	-596.70
CAediting_393579	ENST00000503474.4	chr4_173585454_+	-542.80	-544.40	-596.70
CAediting_393580	ENST00000503474.4	chr4_173585475_+	-543.60	-544.40	-596.70
CAediting_393581	ENST00000503474.4	chr4_173585491_+	-543.70	-544.40	-596.70
CAediting_393582	ENST00000503474.4	chr4_173585615_+	-544.00	-544.40	-596.70
CAediting_393583	ENST00000503474.4	chr4_173585617_+	-550.60	-544.40	-596.70
CAediting_393584	ENST00000503474.4	chr4_173585627_+	-550.40	-544.40	-596.70
CAediting_393585	ENST00000503474.4	chr4_173585634_+	-544.40	-544.40	-596.70
CAediting_393586	ENST00000503474.4	chr4_173585650_+	-543.50	-544.40	-596.70
CAediting_393587	ENST00000503474.4	chr4_173585655_+	-550.40	-544.40	-596.70
CAediting_393588	ENST00000503474.4	chr4_173585656_+	-544.30	-544.40	-596.70
CAediting_393589	ENST00000503474.4	chr4_173585662_+	-548.20	-544.40	-596.70
CAediting_393590	ENST00000503474.4	chr4_173585663_+	-544.40	-544.40	-596.70
CAediting_393591	ENST00000503474.4	chr4_173585673_+	-543.50	-544.40	-596.70
CAediting_393592	ENST00000503474.4	chr4_173585681_+	-544.40	-544.40	-596.70
CAediting_393593	ENST00000503474.4	chr4_173585687_+	-543.50	-544.40	-596.70
CAediting_393594	ENST00000503474.4	chr4_173585705_+	-551.00	-544.40	-596.70
CAediting_393498	ENST00000512099.4	chr4_173583122_+	-750.30	-747.30	-769.50
CAediting_393499	ENST00000512099.4	chr4_173583190_+	-747.30	-747.30	-769.50
CAediting_393500	ENST00000512099.4	chr4_173583200_+	-747.00	-747.30	-769.50
CAediting_393501	ENST00000512099.4	chr4_173583214_+	-747.30	-747.30	-769.50
CAediting_393502	ENST00000512099.4	chr4_173583215_+	-747.30	-747.30	-769.50
CAediting_393503	ENST00000512099.4	chr4_173583216_+	-747.30	-747.30	-769.50
CAediting_393504	ENST00000512099.4	chr4_173583217_+	-747.30	-747.30	-769.50
CAediting_393505	ENST00000512099.4	chr4_173583220_+	-747.30	-747.30	-769.50
CAediting_393506	ENST00000512099.4	chr4_173583227_+	-748.80	-747.30	-769.50
CAediting_393507	ENST00000512099.4	chr4_173583230_+	-750.80	-747.30	-769.50
CAediting_393508	ENST00000512099.4	chr4_173583262_+	-750.70	-747.30	-769.50
CAediting_393509	ENST00000512099.4	chr4_173583266_+	-751.60	-747.30	-769.50
CAediting_393510	ENST00000512099.4	chr4_173583279_+	-748.20	-747.30	-769.50
CAediting_393511	ENST00000512099.4	chr4_173583298_+	-752.90	-747.30	-769.50
CAediting_393512	ENST00000512099.4	chr4_173583327_+	-749.20	-747.30	-769.50
CAediting_393513	ENST00000512099.4	chr4_173583366_+	-749.60	-747.30	-769.50
CAediting_393498	ENST00000514431.4	chr4_173583122_+	-305.20	-302.50	-305.20

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Relation with ADAR for HAND2-AS1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
PCPG	CAediting_393536	chr4_173584104_+	0.00586420089879665	0.240420930275188	0.00162022659615734	0.273810879169365	.	.
PCPG	CAediting_393537	chr4_173584107_+	0.00631580527130622	0.240193344934832	0.00179871821012506	0.273320747388879	.	.
PCPG	CAediting_393538	chr4_173584117_+	1.85418182289901e-05	0.360734826611651	.	.	.	.
PCPG	CAediting_393539	chr4_173584123_+	0.0209752129754197	0.325740539215721	.	.	.	.
PCPG	CAediting_393546	chr4_173584188_+	.	.	3.55160686749011e-06	0.407265882653299	.	.
PCPG	CAediting_393548	chr4_173584198_+	9.69287091731045e-07	0.381504194192507	0.00171701192378377	0.249846405626583	.	.
PCPG	CAediting_393551	chr4_173585237_+	1.48416752646619e-06	0.403310403554947	.	.	.	.
PCPG	CAediting_393553	chr4_173585283_+	9.14935440243169e-05	0.324547674846611	.	.	.	.
PCPG	CAediting_393564	chr4_173585352_+	0.0159359317012687	0.270425709998092	.	.	.	.
PCPG	CAediting_393574	chr4_173585415_+	0.0216276465385756	0.22723829960827	.	.	.	.
PCPG	CAediting_393575	chr4_173585435_+	1.72097420230358e-07	0.455484533170425	0.00505952971691149	0.254337627131461	.	.
PCPG	CAediting_393583	chr4_173585617_+	8.55425021615902e-13	0.533792858561776	0.00275237928160131	0.238934276620214	.	.
PCPG	CAediting_393584	chr4_173585627_+	3.02492989552183e-05	0.343611498791637	0.00171130873938885	0.261826197408615	.	.
PCPG	CAediting_393587	chr4_173585655_+	3.01982040326918e-07	0.398757172811592	3.96916263061051e-11	0.500205190835924	.	.
PCPG	CAediting_393588	chr4_173585656_+	0.022211426947327	0.189815804964307	.	.	.	.
PCPG	CAediting_393594	chr4_173585705_+	8.234808425158e-16	0.594675114886117	0.0103192614597344	0.208170120443003	.	.
PCPG	CAediting_393603	chr4_173587193_+	0.000149993332302617	0.309734590319555	0.0116308351318915	0.209025480610854	.	.
PCPG	CAediting_393604	chr4_173587197_+	3.40145692244712e-07	0.395957527008524	0.000935603827659072	0.263229148750193	.	.

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Relation with cancer stages for HAND2-AS1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for HAND2-AS1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for HAND2-AS1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for HAND2-AS1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene