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Editing gene: CLMN (CAeditome ID:79789)

Gene summary for CLMN

Gene summary

Gene information	Gene symbol	CLMN
	Gene ID	79789
	Gene name	calmin
	Synonyms	-
	Cytomap	14q32.13
	Type of gene	protein-coding
	Description	calmincalmin (calponin-like, transmembrane)calponin-like transmembrane domain protein
	Modification date	20210518
	UniProtAcc	Q96JQ2
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for CLMN

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000165959.10

RNA A-to-I editing events in Cancer.

CAediting_1014914(95184377, -), CAediting_1014915(95184842, -), CAediting_1014916(95184843, -), CAediting_1014917(95184846, -), CAediting_1014918(95184850, -), CAediting_1014919(95184863, -), CAediting_1014920(95184864, -), CAediting_1014921(95184865, -), CAediting_1014922(95184866, -), CAediting_1014923(95184887, -), CAediting_1014924(95184891, -), CAediting_1014925(95184892, -), CAediting_1014926(95184904, -), CAediting_1014927(95184917, -), CAediting_1014928(95184927, -), CAediting_1014929(95184934, -), CAediting_1014930(95184940, -), CAediting_1014931(95184949, -), CAediting_1014932(95184982, -), CAediting_1014933(95184987, -), CAediting_1014934(95184997, -), CAediting_1014935(95185006, -), CAediting_1014936(95185020, -), CAediting_1014937(95185024, -), CAediting_1014938(95185038, -), CAediting_1014939(95185044, -), CAediting_1014940(95185054, -), CAediting_1014941(95185070, -), CAediting_1014942(95185073, -), CAediting_1014943(95185080, -), CAediting_1014944(95185092, -), CAediting_1014945(95185097, -), CAediting_1014946(95185100, -), CAediting_1014947(95185104, -), CAediting_1014948(95185106, -), CAediting_1014949(95185107, -), CAediting_1014950(95185489, -), CAediting_1014951(95186601, -), CAediting_1014952(95186607, -), CAediting_1014953(95186617, -), CAediting_1014954(95186630, -), CAediting_1014955(95186633, -), CAediting_1014956(95186637, -), CAediting_1014957(95186643, -), CAediting_1014958(95186648, -), CAediting_1014959(95186654, -), CAediting_1014960(95186662, -), CAediting_1014961(95186673, -), CAediting_1014962(95186676, -), CAediting_1014963(95186683, -), CAediting_1014964(95186686, -), CAediting_1014965(95186689, -), CAediting_1014966(95186697, -), CAediting_1014967(95186703, -), CAediting_1014968(95186705, -), CAediting_1014969(95186711, -), CAediting_1014970(95186737, -), CAediting_1014971(95186738, -), CAediting_1014972(95186739, -), CAediting_1014973(95186741, -), CAediting_1014974(95186756, -), CAediting_1014975(95186760, -), CAediting_1014976(95186764, -), CAediting_1014977(95186780, -), CAediting_1014978(95186784, -), CAediting_1014979(95186785, -), CAediting_1014980(95186788, -), CAediting_1014981(95186793, -), CAediting_1014982(95186804, -), CAediting_1014983(95186807, -), CAediting_1014984(95186811, -), CAediting_1014985(95186812, -), CAediting_1014986(95186817, -), CAediting_1014987(95186828, -), CAediting_1014988(95186834, -), CAediting_1014989(95186836, -), CAediting_1014990(95186850, -), CAediting_1014991(95186855, -), CAediting_1014992(95186859, -), CAediting_1014993(95186874, -), CAediting_1014994(95186877, -), CAediting_1014995(95186878, -), CAediting_1014996(95193319, -), CAediting_1014997(95198117, -), CAediting_1014998(95198118, -), CAediting_1014999(95198187, -), CAediting_1015000(95198188, -), CAediting_1015001(95200676, -), CAediting_1015002(95200801, -), CAediting_1015003(95200825, -), CAediting_1015004(95200826, -), CAediting_1015005(95201616, -), CAediting_1015006(95201618, -), CAediting_1015007(95201624, -), CAediting_1015008(95201625, -), CAediting_1015009(95201628, -), CAediting_1015010(95201629, -), CAediting_1015011(95201639, -), CAediting_1015012(95201647, -), CAediting_1015013(95201650, -), CAediting_1015014(95201658, -), CAediting_1015015(95201667, -), CAediting_1015016(95202378, -), CAediting_1015017(95202384, -), CAediting_1015018(95202388, -), CAediting_1015019(95202389, -), CAediting_1015020(95202396, -), CAediting_1015021(95202419, -), CAediting_1015022(95202430, -), CAediting_1015023(95203241, -), CAediting_1015024(95242348, -), CAediting_1015025(95244914, -), CAediting_1015026(95244921, -), CAediting_1015027(95244922, -), CAediting_1015028(95244928, -), CAediting_1015029(95244936, -), CAediting_1015030(95244949, -), CAediting_1015031(95244950, -), CAediting_1015032(95244961, -), CAediting_1015033(95244962, -), CAediting_1015034(95249794, -), CAediting_1015035(95261122, -), CAediting_1015036(95261525, -), CAediting_1015037(95262705, -), CAediting_1015038(95262852, -), CAediting_1015039(95263086, -), CAediting_1015040(95263155, -), CAediting_1015041(95264204, -), CAediting_1015042(95264267, -), CAediting_1015043(95265026, -), CAediting_1015044(95265028, -), CAediting_1015045(95268872, -), CAediting_1015046(95268906, -), CAediting_1015047(95268942, -), CAediting_1015048(95268952, -), CAediting_1015049(95270661, -), CAediting_1015050(95271075, -), CAediting_1015051(95271086, -), CAediting_1015052(95271226, -), CAediting_1015053(95271233, -), CAediting_1015054(95271263, -), CAediting_1015055(95274786, -), CAediting_1015056(95274787, -), CAediting_1015057(95275705, -), CAediting_1015058(95275871, -), CAediting_1015059(95277695, -), CAediting_1015060(95277733, -), CAediting_1015061(95277766, -), CAediting_1015062(95277788, -), CAediting_1015063(95277792, -), CAediting_1015064(95277820, -), CAediting_1015065(95277831, -), CAediting_1015066(95277899, -), CAediting_1015067(95289311, -), CAediting_1015068(95289371, -),

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RNA editing positional annotations for CLMN using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1014914	chr14_95184377_-	UTR3
CAediting_1014915	chr14_95184842_-	UTR3
CAediting_1014916	chr14_95184843_-	UTR3
CAediting_1014917	chr14_95184846_-	UTR3
CAediting_1014918	chr14_95184850_-	UTR3
CAediting_1014919	chr14_95184863_-	UTR3
CAediting_1014920	chr14_95184864_-	UTR3
CAediting_1014921	chr14_95184865_-	UTR3
CAediting_1014922	chr14_95184866_-	UTR3
CAediting_1014923	chr14_95184887_-	UTR3
CAediting_1014924	chr14_95184891_-	UTR3
CAediting_1014925	chr14_95184892_-	UTR3
CAediting_1014926	chr14_95184904_-	UTR3
CAediting_1014927	chr14_95184917_-	UTR3
CAediting_1014928	chr14_95184927_-	UTR3
CAediting_1014929	chr14_95184934_-	UTR3
CAediting_1014930	chr14_95184940_-	UTR3
CAediting_1014931	chr14_95184949_-	UTR3
CAediting_1014932	chr14_95184982_-	UTR3
CAediting_1014933	chr14_95184987_-	UTR3
CAediting_1014934	chr14_95184997_-	UTR3
CAediting_1014935	chr14_95185006_-	UTR3
CAediting_1014936	chr14_95185020_-	UTR3
CAediting_1014937	chr14_95185024_-	UTR3
CAediting_1014938	chr14_95185038_-	UTR3
CAediting_1014939	chr14_95185044_-	UTR3
CAediting_1014940	chr14_95185054_-	UTR3
CAediting_1014941	chr14_95185070_-	UTR3
CAediting_1014942	chr14_95185073_-	UTR3
CAediting_1014943	chr14_95185080_-	UTR3
CAediting_1014944	chr14_95185092_-	UTR3
CAediting_1014945	chr14_95185097_-	UTR3
CAediting_1014946	chr14_95185100_-	UTR3
CAediting_1014947	chr14_95185104_-	UTR3
CAediting_1014948	chr14_95185106_-	UTR3
CAediting_1014949	chr14_95185107_-	UTR3
CAediting_1014950	chr14_95185489_-	ncRNA_exonic
CAediting_1014951	chr14_95186601_-	UTR3
CAediting_1014952	chr14_95186607_-	UTR3
CAediting_1014953	chr14_95186617_-	UTR3
CAediting_1014954	chr14_95186630_-	UTR3
CAediting_1014955	chr14_95186633_-	UTR3
CAediting_1014956	chr14_95186637_-	UTR3
CAediting_1014957	chr14_95186643_-	UTR3
CAediting_1014958	chr14_95186648_-	UTR3
CAediting_1014959	chr14_95186654_-	UTR3
CAediting_1014960	chr14_95186662_-	UTR3
CAediting_1014961	chr14_95186673_-	UTR3
CAediting_1014962	chr14_95186676_-	UTR3
CAediting_1014963	chr14_95186683_-	UTR3
CAediting_1014964	chr14_95186686_-	UTR3
CAediting_1014965	chr14_95186689_-	UTR3
CAediting_1014966	chr14_95186697_-	UTR3
CAediting_1014967	chr14_95186703_-	UTR3
CAediting_1014968	chr14_95186705_-	UTR3
CAediting_1014969	chr14_95186711_-	UTR3
CAediting_1014970	chr14_95186737_-	UTR3
CAediting_1014971	chr14_95186738_-	UTR3
CAediting_1014972	chr14_95186739_-	UTR3
CAediting_1014973	chr14_95186741_-	UTR3
CAediting_1014974	chr14_95186756_-	UTR3
CAediting_1014975	chr14_95186760_-	UTR3
CAediting_1014976	chr14_95186764_-	UTR3
CAediting_1014977	chr14_95186780_-	UTR3
CAediting_1014978	chr14_95186784_-	UTR3
CAediting_1014979	chr14_95186785_-	UTR3
CAediting_1014980	chr14_95186788_-	UTR3
CAediting_1014981	chr14_95186793_-	UTR3
CAediting_1014982	chr14_95186804_-	UTR3
CAediting_1014983	chr14_95186807_-	UTR3
CAediting_1014984	chr14_95186811_-	UTR3
CAediting_1014985	chr14_95186812_-	UTR3
CAediting_1014986	chr14_95186817_-	UTR3
CAediting_1014987	chr14_95186828_-	UTR3
CAediting_1014988	chr14_95186834_-	UTR3
CAediting_1014989	chr14_95186836_-	UTR3
CAediting_1014990	chr14_95186850_-	UTR3
CAediting_1014991	chr14_95186855_-	UTR3
CAediting_1014992	chr14_95186859_-	UTR3
CAediting_1014993	chr14_95186874_-	UTR3
CAediting_1014994	chr14_95186877_-	UTR3
CAediting_1014995	chr14_95186878_-	UTR3
CAediting_1014996	chr14_95193319_-	exonic
CAediting_1014997	chr14_95198117_-	ncRNA_intronic
CAediting_1014998	chr14_95198118_-	ncRNA_intronic
CAediting_1014999	chr14_95198187_-	ncRNA_intronic
CAediting_1015000	chr14_95198188_-	ncRNA_intronic
CAediting_1015001	chr14_95200676_-	ncRNA_intronic
CAediting_1015002	chr14_95200801_-	ncRNA_intronic
CAediting_1015003	chr14_95200825_-	ncRNA_intronic
CAediting_1015004	chr14_95200826_-	ncRNA_intronic
CAediting_1015005	chr14_95201616_-	ncRNA_intronic
CAediting_1015006	chr14_95201618_-	ncRNA_intronic
CAediting_1015007	chr14_95201624_-	ncRNA_intronic
CAediting_1015008	chr14_95201625_-	ncRNA_intronic
CAediting_1015009	chr14_95201628_-	ncRNA_intronic
CAediting_1015010	chr14_95201629_-	ncRNA_intronic
CAediting_1015011	chr14_95201639_-	ncRNA_intronic
CAediting_1015012	chr14_95201647_-	ncRNA_intronic
CAediting_1015013	chr14_95201650_-	ncRNA_intronic
CAediting_1015014	chr14_95201658_-	ncRNA_intronic
CAediting_1015015	chr14_95201667_-	ncRNA_intronic
CAediting_1015016	chr14_95202378_-	ncRNA_intronic
CAediting_1015017	chr14_95202384_-	ncRNA_intronic
CAediting_1015018	chr14_95202388_-	ncRNA_intronic
CAediting_1015019	chr14_95202389_-	ncRNA_intronic
CAediting_1015020	chr14_95202396_-	ncRNA_intronic
CAediting_1015021	chr14_95202419_-	ncRNA_intronic
CAediting_1015022	chr14_95202430_-	ncRNA_intronic
CAediting_1015023	chr14_95203241_-	exonic
CAediting_1015024	chr14_95242348_-	intronic
CAediting_1015025	chr14_95244914_-	intronic
CAediting_1015026	chr14_95244921_-	intronic
CAediting_1015027	chr14_95244922_-	intronic
CAediting_1015028	chr14_95244928_-	intronic
CAediting_1015029	chr14_95244936_-	intronic
CAediting_1015030	chr14_95244949_-	intronic
CAediting_1015031	chr14_95244950_-	intronic
CAediting_1015032	chr14_95244961_-	intronic
CAediting_1015033	chr14_95244962_-	intronic
CAediting_1015034	chr14_95249794_-	intronic
CAediting_1015035	chr14_95261122_-	intronic
CAediting_1015036	chr14_95261525_-	intronic
CAediting_1015037	chr14_95262705_-	intronic
CAediting_1015038	chr14_95262852_-	intronic
CAediting_1015039	chr14_95263086_-	intronic
CAediting_1015040	chr14_95263155_-	intronic
CAediting_1015041	chr14_95264204_-	intronic
CAediting_1015042	chr14_95264267_-	intronic
CAediting_1015043	chr14_95265026_-	intronic
CAediting_1015044	chr14_95265028_-	intronic
CAediting_1015045	chr14_95268872_-	intronic
CAediting_1015046	chr14_95268906_-	intronic
CAediting_1015047	chr14_95268942_-	intronic
CAediting_1015048	chr14_95268952_-	intronic
CAediting_1015049	chr14_95270661_-	intronic
CAediting_1015050	chr14_95271075_-	intronic
CAediting_1015051	chr14_95271086_-	intronic
CAediting_1015052	chr14_95271226_-	intronic
CAediting_1015053	chr14_95271233_-	intronic
CAediting_1015054	chr14_95271263_-	intronic
CAediting_1015055	chr14_95274786_-	intronic
CAediting_1015056	chr14_95274787_-	intronic
CAediting_1015057	chr14_95275705_-	intronic
CAediting_1015058	chr14_95275871_-	intronic
CAediting_1015059	chr14_95277695_-	intronic
CAediting_1015060	chr14_95277733_-	intronic
CAediting_1015061	chr14_95277766_-	intronic
CAediting_1015062	chr14_95277788_-	intronic
CAediting_1015063	chr14_95277792_-	intronic
CAediting_1015064	chr14_95277820_-	intronic
CAediting_1015065	chr14_95277831_-	intronic
CAediting_1015066	chr14_95277899_-	intronic
CAediting_1015067	chr14_95289311_-	intronic
CAediting_1015068	chr14_95289371_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1014915	chr14_95184842_-	SINE	Alu	AluJr
CAediting_1014916	chr14_95184843_-	SINE	Alu	AluJr
CAediting_1014917	chr14_95184846_-	SINE	Alu	AluJr
CAediting_1014918	chr14_95184850_-	SINE	Alu	AluJr
CAediting_1014919	chr14_95184863_-	SINE	Alu	AluJr
CAediting_1014920	chr14_95184864_-	SINE	Alu	AluJr
CAediting_1014921	chr14_95184865_-	SINE	Alu	AluJr
CAediting_1014922	chr14_95184866_-	SINE	Alu	AluJr
CAediting_1014923	chr14_95184887_-	SINE	Alu	AluJr
CAediting_1014924	chr14_95184891_-	SINE	Alu	AluJr
CAediting_1014925	chr14_95184892_-	SINE	Alu	AluJr
CAediting_1014926	chr14_95184904_-	SINE	Alu	AluJr
CAediting_1014927	chr14_95184917_-	SINE	Alu	AluJr
CAediting_1014928	chr14_95184927_-	SINE	Alu	AluJr
CAediting_1014929	chr14_95184934_-	SINE	Alu	AluJr
CAediting_1014930	chr14_95184940_-	SINE	Alu	AluJr
CAediting_1014931	chr14_95184949_-	SINE	Alu	AluJr
CAediting_1014932	chr14_95184982_-	SINE	Alu	AluJr
CAediting_1014933	chr14_95184987_-	SINE	Alu	AluJr
CAediting_1014934	chr14_95184997_-	SINE	Alu	AluJr
CAediting_1014935	chr14_95185006_-	SINE	Alu	AluJr
CAediting_1014936	chr14_95185020_-	SINE	Alu	AluJr
CAediting_1014937	chr14_95185024_-	SINE	Alu	AluJr
CAediting_1014938	chr14_95185038_-	SINE	Alu	AluJr
CAediting_1014939	chr14_95185044_-	SINE	Alu	AluJr
CAediting_1014940	chr14_95185054_-	SINE	Alu	AluJr
CAediting_1014941	chr14_95185070_-	SINE	Alu	AluJr
CAediting_1014942	chr14_95185073_-	SINE	Alu	AluJr
CAediting_1014943	chr14_95185080_-	SINE	Alu	AluJr
CAediting_1014944	chr14_95185092_-	SINE	Alu	AluJr
CAediting_1014945	chr14_95185097_-	SINE	Alu	AluJr
CAediting_1014946	chr14_95185100_-	SINE	Alu	AluJr
CAediting_1014947	chr14_95185104_-	SINE	Alu	AluJr
CAediting_1014948	chr14_95185106_-	SINE	Alu	AluJr
CAediting_1014949	chr14_95185107_-	SINE	Alu	AluJr
CAediting_1014951	chr14_95186601_-	SINE	Alu	AluJr4
CAediting_1014952	chr14_95186607_-	SINE	Alu	AluJr4
CAediting_1014953	chr14_95186617_-	SINE	Alu	AluJr4
CAediting_1014954	chr14_95186630_-	SINE	Alu	AluJr4
CAediting_1014955	chr14_95186633_-	SINE	Alu	AluJr4
CAediting_1014956	chr14_95186637_-	SINE	Alu	AluJr4
CAediting_1014957	chr14_95186643_-	SINE	Alu	AluJr4
CAediting_1014958	chr14_95186648_-	SINE	Alu	AluJr4
CAediting_1014959	chr14_95186654_-	SINE	Alu	AluJr4
CAediting_1014960	chr14_95186662_-	SINE	Alu	AluJr4
CAediting_1014961	chr14_95186673_-	SINE	Alu	AluJr4
CAediting_1014962	chr14_95186676_-	SINE	Alu	AluJr4
CAediting_1014963	chr14_95186683_-	SINE	Alu	AluJr4
CAediting_1014964	chr14_95186686_-	SINE	Alu	AluJr4
CAediting_1014965	chr14_95186689_-	SINE	Alu	AluJr4
CAediting_1014966	chr14_95186697_-	SINE	Alu	AluJr4
CAediting_1014967	chr14_95186703_-	SINE	Alu	AluJr4
CAediting_1014968	chr14_95186705_-	SINE	Alu	AluJr4
CAediting_1014969	chr14_95186711_-	SINE	Alu	AluJr4
CAediting_1014970	chr14_95186737_-	SINE	Alu	AluJr4
CAediting_1014971	chr14_95186738_-	SINE	Alu	AluJr4
CAediting_1014972	chr14_95186739_-	SINE	Alu	AluJr4
CAediting_1014973	chr14_95186741_-	SINE	Alu	AluJr4
CAediting_1014974	chr14_95186756_-	SINE	Alu	AluJr4
CAediting_1014975	chr14_95186760_-	SINE	Alu	AluJr4
CAediting_1014976	chr14_95186764_-	SINE	Alu	AluJr4
CAediting_1014977	chr14_95186780_-	SINE	Alu	AluJr4
CAediting_1014978	chr14_95186784_-	SINE	Alu	AluJr4
CAediting_1014979	chr14_95186785_-	SINE	Alu	AluJr4
CAediting_1014980	chr14_95186788_-	SINE	Alu	AluJr4
CAediting_1014981	chr14_95186793_-	SINE	Alu	AluJr4
CAediting_1014982	chr14_95186804_-	SINE	Alu	AluJr4
CAediting_1014983	chr14_95186807_-	SINE	Alu	AluJr4
CAediting_1014984	chr14_95186811_-	SINE	Alu	AluJr4
CAediting_1014985	chr14_95186812_-	SINE	Alu	AluJr4
CAediting_1014986	chr14_95186817_-	SINE	Alu	AluJr4
CAediting_1014987	chr14_95186828_-	SINE	Alu	AluJr4
CAediting_1014988	chr14_95186834_-	SINE	Alu	AluJr4
CAediting_1014989	chr14_95186836_-	SINE	Alu	AluJr4
CAediting_1014997	chr14_95198117_-	SINE	Alu	AluSq2
CAediting_1014998	chr14_95198118_-	SINE	Alu	AluSq2
CAediting_1014999	chr14_95198187_-	SINE	Alu	AluSq2
CAediting_1015000	chr14_95198188_-	SINE	Alu	AluSq2
CAediting_1015005	chr14_95201616_-	LINE	L1	L1PA8
CAediting_1015006	chr14_95201618_-	LINE	L1	L1PA8
CAediting_1015007	chr14_95201624_-	LINE	L1	L1PA8
CAediting_1015008	chr14_95201625_-	LINE	L1	L1PA8
CAediting_1015009	chr14_95201628_-	LINE	L1	L1PA8
CAediting_1015010	chr14_95201629_-	LINE	L1	L1PA8
CAediting_1015011	chr14_95201639_-	LINE	L1	L1PA8
CAediting_1015012	chr14_95201647_-	LINE	L1	L1PA8
CAediting_1015013	chr14_95201650_-	LINE	L1	L1PA8
CAediting_1015014	chr14_95201658_-	LINE	L1	L1PA8
CAediting_1015015	chr14_95201667_-	LINE	L1	L1PA8
CAediting_1015022	chr14_95202430_-	LINE	L1	L1PA16
CAediting_1015024	chr14_95242348_-	SINE	Alu	AluSz
CAediting_1015034	chr14_95249794_-	SINE	Alu	AluSc8
CAediting_1015035	chr14_95261122_-	DNA	TcMar-Tigger	Tigger17a
CAediting_1015036	chr14_95261525_-	DNA	TcMar-Tigger	Tigger17c
CAediting_1015037	chr14_95262705_-	SINE	Alu	AluJo
CAediting_1015038	chr14_95262852_-	SINE	Alu	AluJo
CAediting_1015039	chr14_95263086_-	LTR	ERVL-MaLR	THE1C
CAediting_1015040	chr14_95263155_-	LTR	ERVL-MaLR	THE1C
CAediting_1015041	chr14_95264204_-	SINE	Alu	AluJb
CAediting_1015042	chr14_95264267_-	SINE	Alu	AluJb
CAediting_1015043	chr14_95265026_-	SINE	Alu	AluJb
CAediting_1015044	chr14_95265028_-	SINE	Alu	AluJb
CAediting_1015045	chr14_95268872_-	SINE	Alu	AluSx4
CAediting_1015046	chr14_95268906_-	SINE	Alu	AluSx4
CAediting_1015047	chr14_95268942_-	SINE	Alu	AluSx4
CAediting_1015048	chr14_95268952_-	SINE	Alu	AluSx4
CAediting_1015049	chr14_95270661_-	LINE	L1	L1MB8
CAediting_1015050	chr14_95271075_-	LINE	L1	L1MB8
CAediting_1015051	chr14_95271086_-	LINE	L1	L1MB8
CAediting_1015052	chr14_95271226_-	LINE	L1	L1MB8
CAediting_1015053	chr14_95271233_-	LINE	L1	L1MB8
CAediting_1015054	chr14_95271263_-	LINE	L1	L1MB8
CAediting_1015055	chr14_95274786_-	SINE	Alu	AluSc
CAediting_1015056	chr14_95274787_-	SINE	Alu	AluSc
CAediting_1015057	chr14_95275705_-	SINE	Alu	AluSq2
CAediting_1015058	chr14_95275871_-	SINE	Alu	AluSq2
CAediting_1015059	chr14_95277695_-	SINE	Alu	AluSx1
CAediting_1015060	chr14_95277733_-	SINE	Alu	AluSx1
CAediting_1015061	chr14_95277766_-	SINE	Alu	AluSx1
CAediting_1015062	chr14_95277788_-	SINE	Alu	AluSx1
CAediting_1015063	chr14_95277792_-	SINE	Alu	AluSx1
CAediting_1015064	chr14_95277820_-	SINE	Alu	AluSx1
CAediting_1015065	chr14_95277831_-	SINE	Alu	AluSx1
CAediting_1015066	chr14_95277899_-	SINE	Alu	AluSx1
CAediting_1015067	chr14_95289311_-	SINE	Alu	AluSx3
CAediting_1015068	chr14_95289371_-	SINE	Alu	AluSx3

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RNA A-to-I editing events in the alternative splicing sites for CLMN

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1014996	chr14_95193319_-	95193312:95193320	5SS	2+0i	AAGTATTTC	-16.24	AGGTATTTC	-22.96
IR	CAediting_1014996	chr14_95193319_-	95193312:95193320	5SS	2+0i	AAGTATTTC	-16.24	AGGTATTTC	-22.96

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000165959.10.CLMN.

Correlation between RNA A-to-I editing and PSI for ENSG00000165959.10.CLMN.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CLMN

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CLMN

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CLMN

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1014914	chr14_95184377_-	ENSG00000165959.10	ENST00000298912	hsa-miR-378a-5p	95184374	95184381	8mer-1a	95184374	95184396	146.00	-17.26
CAediting_1014914	chr14_95184377_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6719-3p	95184377	95184383	7mer-m8	95184376	95184395	156.00	-18.92
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-383-3p	95184858	95184864	7mer-m8	95184857	95184873	144.00	-17.06
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-9-5p	95184863	95184869	7mer-m8	95184862	95184884	143.00	-13.27
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-9-5p	95184863	95184869	7mer-m8	95184862	95184884	143.00	-13.27
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-9-5p	95184863	95184869	7mer-m8	95184862	95184884	143.00	-13.27
CAediting_1014924	chr14_95184891_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3622a-3p	95184887	95184894	8mer-1a	95184887	95184908	140.00	-15.99
CAediting_1014924	chr14_95184891_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3622b-3p	95184887	95184894	8mer-1a	95184887	95184907	149.00	-20.31
CAediting_1014924	chr14_95184891_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4649-3p	95184891	95184897	7mer-m8	95184890	95184910	147.00	-18.42
CAediting_1014924	chr14_95184891_-	ENSG00000165959.10	ENST00000298912	hsa-miR-544b	95184890	95184896	7mer-m8	95184889	95184909	153.00	-18.39
CAediting_1014934	chr14_95184997_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6852-5p	95184996	95185001	6mer	95184995	95185014	149.00	-26.62
CAediting_1014945	chr14_95185097_-	ENSG00000165959.10	ENST00000298912	hsa-miR-208a-3p	95185092	95185098	7mer-m8	95185091	95185112	140.00	-10.60
CAediting_1014945	chr14_95185097_-	ENSG00000165959.10	ENST00000298912	hsa-miR-208b-3p	95185092	95185098	7mer-m8	95185091	95185112	140.00	-10.23
CAediting_1014946	chr14_95185100_-	ENSG00000165959.10	ENST00000298912	hsa-miR-340-3p	95185099	95185105	7mer-m8	95185098	95185117	142.00	-14.11
CAediting_1014946	chr14_95185100_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6827-3p	95185099	95185105	7mer-m8	95185098	95185118	150.00	-16.89
CAediting_1014952	chr14_95186607_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4726-3p	95186606	95186612	7mer-m8	95186605	95186626	140.00	-16.04
CAediting_1014952	chr14_95186607_-	ENSG00000165959.10	ENST00000298912	hsa-miR-500b-3p	95186603	95186610	8mer-1a	95186603	95186620	146.00	-19.60
CAediting_1014952	chr14_95186607_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6879-3p	95186601	95186608	8mer-1a	95186601	95186621	141.00	-16.41
CAediting_1014953	chr14_95186617_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1468-3p	95186616	95186622	7mer-m8	95186615	95186635	151.00	-14.63
CAediting_1014953	chr14_95186617_-	ENSG00000165959.10	ENST00000298912	hsa-miR-548p	95186615	95186621	7mer-m8	95186614	95186634	145.00	-11.26
CAediting_1014957	chr14_95186643_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3120-3p	95186639	95186645	7mer-m8	95186638	95186658	147.00	-14.77
CAediting_1014969	chr14_95186711_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4666b	95186709	95186714	6mer	95186708	95186729	142.00	-12.97
CAediting_1014969	chr14_95186711_-	ENSG00000165959.10	ENST00000298912	hsa-miR-519a-3p	95186705	95186712	8mer-1a	95186705	95186726	152.00	-13.94
CAediting_1014969	chr14_95186711_-	ENSG00000165959.10	ENST00000298912	hsa-miR-519a-3p	95186705	95186712	8mer-1a	95186705	95186726	152.00	-13.94
CAediting_1014969	chr14_95186711_-	ENSG00000165959.10	ENST00000298912	hsa-miR-519b-3p	95186705	95186712	8mer-1a	95186705	95186726	152.00	-13.94
CAediting_1014969	chr14_95186711_-	ENSG00000165959.10	ENST00000298912	hsa-miR-519c-3p	95186705	95186712	8mer-1a	95186705	95186726	148.00	-11.33
CAediting_1014978	chr14_95186784_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4680-5p	95186780	95186786	7mer-1a	95186780	95186800	144.00	-21.51
CAediting_1014989	chr14_95186836_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10399-5p	95186832	95186838	7mer-m8	95186831	95186852	148.00	-10.00
CAediting_1014989	chr14_95186836_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3934-5p	95186836	95186842	7mer-m8	95186835	95186857	151.00	-23.91
CAediting_1014989	chr14_95186836_-	ENSG00000165959.10	ENST00000298912	hsa-miR-552-3p	95186834	95186841	8mer-1a	95186834	95186854	140.00	-14.62
CAediting_1014989	chr14_95186836_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6504-3p	95186832	95186838	7mer-m8	95186831	95186852	149.00	-15.24
CAediting_1014995	chr14_95186878_-	ENSG00000165959.10	ENST00000298912	hsa-miR-513c-5p	95186874	95186881	8mer-1a	95186874	95186896	150.00	-16.52
CAediting_1014995	chr14_95186878_-	ENSG00000165959.10	ENST00000298912	hsa-miR-514b-5p	95186874	95186881	8mer-1a	95186874	95186893	155.00	-19.44
CAediting_1014915	chr14_95184842_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6847-3p	95184841	95184847	7mer-m8	95184840	95184862	153.00	-20.81
CAediting_1014916	chr14_95184843_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5581-3p	95184842	95184848	7mer-m8	95184841	95184867	155.00	-21.66
CAediting_1014916	chr14_95184843_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6872-3p	95184842	95184849	8mer-1a	95184842	95184862	147.00	-20.73
CAediting_1014923	chr14_95184887_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1255b-2-3p	95184886	95184892	7mer-m8	95184885	95184906	140.00	-9.30
CAediting_1014923	chr14_95184887_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4751	95184882	95184888	7mer-m8	95184881	95184904	158.00	-22.80
CAediting_1014926	chr14_95184904_-	ENSG00000165959.10	ENST00000298912	hsa-miR-28-5p	95184899	95184905	7mer-m8	95184898	95184918	151.00	-22.03
CAediting_1014926	chr14_95184904_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3139	95184899	95184905	7mer-m8	95184898	95184920	165.00	-26.99
CAediting_1014926	chr14_95184904_-	ENSG00000165959.10	ENST00000298912	hsa-miR-708-5p	95184899	95184905	7mer-m8	95184898	95184919	150.00	-20.51
CAediting_1014929	chr14_95184934_-	ENSG00000165959.10	ENST00000298912	hsa-miR-100-5p	95184931	95184937	7mer-m8	95184930	95184951	144.00	-11.74
CAediting_1014929	chr14_95184934_-	ENSG00000165959.10	ENST00000298912	hsa-miR-99a-5p	95184931	95184937	7mer-m8	95184930	95184951	140.00	-12.75
CAediting_1014929	chr14_95184934_-	ENSG00000165959.10	ENST00000298912	hsa-miR-99b-5p	95184931	95184937	7mer-m8	95184930	95184951	140.00	-12.88
CAediting_1014932	chr14_95184982_-	ENSG00000165959.10	ENST00000298912	hsa-miR-100-5p	95184979	95184985	7mer-m8	95184978	95185001	154.00	-20.81
CAediting_1014932	chr14_95184982_-	ENSG00000165959.10	ENST00000298912	hsa-miR-99a-5p	95184979	95184985	7mer-m8	95184978	95185001	154.00	-19.69
CAediting_1014932	chr14_95184982_-	ENSG00000165959.10	ENST00000298912	hsa-miR-99b-5p	95184979	95184985	7mer-m8	95184978	95185001	159.00	-25.57
CAediting_1014933	chr14_95184987_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1226-3p	95184987	95184993	7mer-m8	95184986	95185007	142.00	-14.55
CAediting_1014937	chr14_95185024_-	ENSG00000165959.10	ENST00000298912	hsa-miR-615-3p	95185023	95185029	7mer-m8	95185022	95185043	152.00	-24.79
CAediting_1014941	chr14_95185070_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4793-3p	95185067	95185073	7mer-m8	95185066	95185088	149.00	-22.66
CAediting_1014941	chr14_95185070_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6807-3p	95185066	95185071	6mer	95185065	95185087	154.00	-30.36
CAediting_1014941	chr14_95185070_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7703	95185068	95185074	7mer-m8	95185067	95185089	163.00	-26.74
CAediting_1014943	chr14_95185080_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10396a-3p	95185077	95185083	7mer-m8	95185076	95185096	140.00	-23.55
CAediting_1014943	chr14_95185080_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10396b-3p	95185077	95185083	7mer-m8	95185076	95185097	140.00	-20.90
CAediting_1014943	chr14_95185080_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4783-3p	95185079	95185085	7mer-m8	95185078	95185100	150.00	-26.50
CAediting_1014944	chr14_95185092_-	ENSG00000165959.10	ENST00000298912	hsa-miR-2278	95185088	95185093	6mer	95185087	95185109	143.00	-16.50
CAediting_1014944	chr14_95185092_-	ENSG00000165959.10	ENST00000298912	hsa-miR-451b	95185090	95185096	7mer-m8	95185089	95185110	140.00	-8.63
CAediting_1014944	chr14_95185092_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6501-3p	95185087	95185093	7mer-m8	95185086	95185108	157.00	-17.02
CAediting_1014949	chr14_95185107_-	ENSG00000165959.10	ENST00000298912	hsa-miR-371b-5p	95185104	95185111	8mer-1a	95185104	95185125	146.00	-12.12
CAediting_1014949	chr14_95185107_-	ENSG00000165959.10	ENST00000298912	hsa-miR-373-5p	95185104	95185111	8mer-1a	95185104	95185125	142.00	-9.08
CAediting_1014949	chr14_95185107_-	ENSG00000165959.10	ENST00000298912	hsa-miR-514b-5p	95185104	95185109	6mer	95185103	95185125	140.00	-16.16
CAediting_1014949	chr14_95185107_-	ENSG00000165959.10	ENST00000298912	hsa-miR-616-5p	95185104	95185111	8mer-1a	95185104	95185125	140.00	-11.49
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4659a-5p	95185486	95185492	7mer-m8	95185485	95185506	145.00	-15.65
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4659b-5p	95185486	95185492	7mer-m8	95185485	95185503	145.00	-13.31
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4722-3p	95185484	95185490	7mer-m8	95185483	95185504	140.00	-14.95
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4769-3p	95185485	95185491	7mer-m8	95185484	95185505	140.00	-12.30
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6727-3p	95185484	95185490	7mer-m8	95185483	95185502	140.00	-13.48
CAediting_1014950	chr14_95185489_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6817-5p	95185485	95185491	7mer-m8	95185484	95185510	143.00	-20.25
CAediting_1014956	chr14_95186637_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3651	95186632	95186638	7mer-m8	95186631	95186656	142.00	-18.23
CAediting_1014958	chr14_95186648_-	ENSG00000165959.10	ENST00000298912	hsa-miR-186-3p	95186647	95186653	7mer-m8	95186646	95186667	140.00	-18.01
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3136-3p	95186659	95186665	7mer-m8	95186658	95186679	159.00	-15.90
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6724-5p	95186657	95186663	7mer-m8	95186656	95186678	141.00	-22.45
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6724-5p	95186657	95186663	7mer-m8	95186656	95186678	141.00	-22.45
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6724-5p	95186657	95186663	7mer-m8	95186656	95186678	141.00	-22.45
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6724-5p	95186657	95186663	7mer-m8	95186656	95186678	141.00	-22.45
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6773-5p	95186657	95186663	7mer-m8	95186656	95186679	149.00	-20.87
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7155-3p	95186659	95186665	7mer-m8	95186658	95186676	141.00	-16.86
CAediting_1014961	chr14_95186673_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6801-3p	95186671	95186678	8mer-1a	95186671	95186690	149.00	-24.49
CAediting_1014961	chr14_95186673_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6810-3p	95186671	95186678	8mer-1a	95186671	95186693	154.00	-26.03
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4667-3p	95186683	95186689	7mer-m8	95186682	95186702	140.00	-17.38
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6784-3p	95186679	95186685	7mer-m8	95186678	95186699	140.00	-19.06
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6862-3p	95186679	95186685	7mer-m8	95186678	95186701	151.00	-23.08
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6862-3p	95186679	95186685	7mer-m8	95186678	95186701	151.00	-23.08
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6865-3p	95186680	95186687	8mer-1a	95186680	95186700	146.00	-15.46
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-125a-5p	95186686	95186692	7mer-m8	95186685	95186707	144.00	-18.74
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-125b-5p	95186686	95186692	7mer-m8	95186685	95186706	141.00	-16.75
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-125b-5p	95186686	95186692	7mer-m8	95186685	95186706	141.00	-16.75
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4319	95186686	95186692	7mer-m8	95186685	95186701	142.00	-17.68
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6729-3p	95186680	95186687	8mer-1a	95186680	95186700	150.00	-20.52
CAediting_1014967	chr14_95186703_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3619-3p	95186699	95186705	7mer-m8	95186698	95186720	147.00	-19.98
CAediting_1014968	chr14_95186705_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6513-3p	95186705	95186711	7mer-m8	95186704	95186724	152.00	-15.91
CAediting_1014971	chr14_95186738_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6844	95186737	95186743	7mer-m8	95186736	95186756	140.00	-8.26
CAediting_1014972	chr14_95186739_-	ENSG00000165959.10	ENST00000298912	hsa-miR-578	95186737	95186743	7mer-m8	95186736	95186756	143.00	-14.46
CAediting_1014974	chr14_95186756_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6838-3p	95186752	95186758	7mer-m8	95186751	95186769	163.00	-22.91
CAediting_1014981	chr14_95186793_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5699-5p	95186790	95186796	7mer-m8	95186789	95186810	140.00	-12.74
CAediting_1014981	chr14_95186793_-	ENSG00000165959.10	ENST00000298912	hsa-miR-874-5p	95186788	95186795	8mer-1a	95186788	95186810	147.00	-18.62
CAediting_1014982	chr14_95186804_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6752-3p	95186804	95186810	7mer-m8	95186803	95186822	145.00	-29.08
CAediting_1014982	chr14_95186804_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6801-3p	95186803	95186809	7mer-m8	95186802	95186821	145.00	-25.27
CAediting_1014982	chr14_95186804_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6810-3p	95186803	95186809	7mer-m8	95186802	95186821	153.00	-29.46
CAediting_1014984	chr14_95186811_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3176	95186811	95186817	7mer-m8	95186810	95186828	140.00	-16.93
CAediting_1014984	chr14_95186811_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3922-3p	95186811	95186817	7mer-m8	95186810	95186831	141.00	-19.73
CAediting_1014984	chr14_95186811_-	ENSG00000165959.10	ENST00000298912	hsa-miR-874-3p	95186807	95186813	7mer-m8	95186806	95186830	162.00	-34.51
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6781-5p	95186824	95186830	7mer-m8	95186823	95186842	152.00	-22.64
CAediting_1014988	chr14_95186834_-	ENSG00000165959.10	ENST00000298912	hsa-miR-638	95186828	95186834	7mer-1a	95186828	95186852	141.00	-24.95
CAediting_1014993	chr14_95186874_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6818-3p	95186871	95186877	7mer-m8	95186870	95186891	146.00	-14.07
CAediting_1014993	chr14_95186874_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6888-3p	95186868	95186875	8mer-1a	95186868	95186888	145.00	-13.43
CAediting_1014931	chr14_95184949_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3613-3p	95184949	95184955	7mer-m8	95184948	95184971	149.00	-6.67
CAediting_1014936	chr14_95185020_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6078	95185019	95185026	8mer-1a	95185019	95185038	156.00	-22.40
CAediting_1014954	chr14_95186630_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3619-3p	95186627	95186633	7mer-m8	95186626	95186645	145.00	-19.09
CAediting_1014954	chr14_95186630_-	ENSG00000165959.10	ENST00000298912	hsa-miR-591	95186628	95186633	6mer	95186627	95186645	140.00	-17.19
CAediting_1014975	chr14_95186760_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4659a-5p	95186756	95186763	8mer-1a	95186756	95186776	147.00	-11.74
CAediting_1014975	chr14_95186760_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4659b-5p	95186756	95186763	8mer-1a	95186756	95186773	147.00	-13.85
CAediting_1014975	chr14_95186760_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4716-5p	95186759	95186765	7mer-m8	95186758	95186779	140.00	-8.55
CAediting_1014975	chr14_95186760_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4776-3p	95186756	95186762	7mer-m8	95186755	95186778	149.00	-19.24
CAediting_1014975	chr14_95186760_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4776-3p	95186756	95186762	7mer-m8	95186755	95186778	149.00	-19.24

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10400-3p	95186657	95186663	7mer-m8	95186656	95186675	145	-16.83
CAediting_1014967	chr14_95186703_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10525-3p	95186700	95186705	6mer	95186699	95186720	140	-16.28
CAediting_1014968	chr14_95186705_-	ENSG00000165959.10	ENST00000298912	hsa-miR-10525-3p	95186700	95186705	6mer	95186699	95186720	140	-16.28
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1200	95186686	95186692	7mer-m8	95186685	95186706	141	-18.61
CAediting_1014965	chr14_95186689_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1200	95186686	95186692	7mer-m8	95186685	95186706	141	-18.61
CAediting_1014915	chr14_95184842_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1206	95184841	95184847	7mer-m8	95184840	95184860	149	-11.69
CAediting_1014916	chr14_95184843_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1206	95184841	95184847	7mer-m8	95184840	95184860	149	-11.69
CAediting_1014917	chr14_95184846_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1206	95184841	95184847	7mer-m8	95184840	95184860	149	-11.69
CAediting_1014934	chr14_95184997_-	ENSG00000165959.10	ENST00000298912	hsa-miR-12126	95184994	95185001	8mer-1a	95184994	95185017	147	-13.08
CAediting_1014986	chr14_95186817_-	ENSG00000165959.10	ENST00000298912	hsa-miR-150-5p	95186816	95186822	7mer-m8	95186815	95186836	140	-13.4
CAediting_1014939	chr14_95185044_-	ENSG00000165959.10	ENST00000298912	hsa-miR-17-3p	95185043	95185049	7mer-m8	95185042	95185063	150	-16.77
CAediting_1014982	chr14_95186804_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1976	95186803	95186809	7mer-m8	95186802	95186823	152	-25.54
CAediting_1014983	chr14_95186807_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1976	95186803	95186809	7mer-m8	95186802	95186823	152	-25.54
CAediting_1014915	chr14_95184842_-	ENSG00000165959.10	ENST00000298912	hsa-miR-203a-5p	95184838	95184844	7mer-m8	95184837	95184865	145	-17.04
CAediting_1014916	chr14_95184843_-	ENSG00000165959.10	ENST00000298912	hsa-miR-203a-5p	95184838	95184844	7mer-m8	95184837	95184865	145	-17.04
CAediting_1014984	chr14_95186811_-	ENSG00000165959.10	ENST00000298912	hsa-miR-212-5p	95186809	95186815	7mer-m8	95186808	95186832	154	-20.38
CAediting_1014985	chr14_95186812_-	ENSG00000165959.10	ENST00000298912	hsa-miR-212-5p	95186809	95186815	7mer-m8	95186808	95186832	154	-20.38
CAediting_1014957	chr14_95186643_-	ENSG00000165959.10	ENST00000298912	hsa-miR-216a-3p	95186637	95186643	7mer-1a	95186637	95186658	145	-23.27
CAediting_1014956	chr14_95186637_-	ENSG00000165959.10	ENST00000298912	hsa-miR-27a-3p	95186637	95186643	7mer-m8	95186636	95186658	153	-18.63
CAediting_1014956	chr14_95186637_-	ENSG00000165959.10	ENST00000298912	hsa-miR-27b-3p	95186637	95186643	7mer-m8	95186636	95186659	154	-20.38
CAediting_1014980	chr14_95186788_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3176	95186787	95186793	7mer-m8	95186786	95186804	145	-17.1
CAediting_1014973	chr14_95186741_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3674	95186739	95186746	8mer-1a	95186739	95186760	140	-9.29
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-371a-5p	95186661	95186667	7mer-m8	95186660	95186679	143	-10.01
CAediting_1014980	chr14_95186788_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3922-3p	95186787	95186793	7mer-m8	95186786	95186806	154	-21.46
CAediting_1014935	chr14_95185006_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3929	95185002	95185008	7mer-m8	95185001	95185022	151	-18.23
CAediting_1014927	chr14_95184917_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4293	95184913	95184919	7mer-m8	95184912	95184929	144	-22.7
CAediting_1014974	chr14_95186756_-	ENSG00000165959.10	ENST00000298912	hsa-miR-431-5p	95186753	95186759	7mer-m8	95186752	95186774	145	-14.29
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4310	95184858	95184864	7mer-m8	95184857	95184872	141	-8.38
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4437	95186657	95186664	8mer-1a	95186657	95186674	144	-18.14
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4446-3p	95186823	95186829	7mer-m8	95186822	95186843	150	-20.94
CAediting_1014935	chr14_95185006_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4478	95185002	95185008	7mer-m8	95185001	95185019	150	-25.92
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4492	95186824	95186830	7mer-m8	95186823	95186839	145	-19.62
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4498	95186824	95186830	7mer-m8	95186823	95186844	151	-19.08
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4505	95186825	95186831	7mer-m8	95186824	95186841	144	-20.96
CAediting_1014935	chr14_95185006_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4649-3p	95185005	95185011	7mer-m8	95185004	95185024	140	-16.11
CAediting_1014931	chr14_95184949_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4662a-3p	95184945	95184950	6mer	95184944	95184966	145	-10.79
CAediting_1014960	chr14_95186662_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4674	95186657	95186663	7mer-m8	95186656	95186675	144	-16.68
CAediting_1014940	chr14_95185054_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4679	95185053	95185059	7mer-m8	95185052	95185073	144	-13.75
CAediting_1014940	chr14_95185054_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4679	95185053	95185059	7mer-m8	95185052	95185073	144	-13.75
CAediting_1014990	chr14_95186850_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4693-5p	95186850	95186856	7mer-m8	95186849	95186872	142	-12.62
CAediting_1014991	chr14_95186855_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4693-5p	95186850	95186856	7mer-m8	95186849	95186872	142	-12.62
CAediting_1014935	chr14_95185006_-	ENSG00000165959.10	ENST00000298912	hsa-miR-485-5p	95185001	95185007	7mer-m8	95185000	95185022	155	-16.98
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5001-5p	95186824	95186830	7mer-m8	95186823	95186847	153	-25.5
CAediting_1014942	chr14_95185073_-	ENSG00000165959.10	ENST00000298912	hsa-miR-508-5p	95185070	95185077	8mer-1a	95185070	95185092	142	-18.09
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5089-5p	95186828	95186834	7mer-m8	95186827	95186849	148	-13.1
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5196-3p	95186680	95186687	8mer-1a	95186680	95186700	142	-13.52
CAediting_1014964	chr14_95186686_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5196-3p	95186680	95186687	8mer-1a	95186680	95186700	142	-13.52
CAediting_1014991	chr14_95186855_-	ENSG00000165959.10	ENST00000298912	hsa-miR-550b-2-5p	95186853	95186859	7mer-m8	95186852	95186872	150	-15.41
CAediting_1014991	chr14_95186855_-	ENSG00000165959.10	ENST00000298912	hsa-miR-550b-2-5p	95186853	95186859	7mer-m8	95186852	95186872	150	-15.41
CAediting_1014961	chr14_95186673_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5571-5p	95186668	95186674	7mer-m8	95186667	95186687	140	-19.3
CAediting_1014931	chr14_95184949_-	ENSG00000165959.10	ENST00000298912	hsa-miR-577	95184946	95184952	7mer-m8	95184945	95184966	154	-10.33
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-5787	95186825	95186831	7mer-m8	95186824	95186843	142	-24.72
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6072	95186678	95186684	7mer-m8	95186677	95186698	146	-17.09
CAediting_1014966	chr14_95186697_-	ENSG00000165959.10	ENST00000298912	hsa-miR-619-5p	95186696	95186701	6mer	95186695	95186716	144	-22.77
CAediting_1014946	chr14_95185100_-	ENSG00000165959.10	ENST00000298912	hsa-miR-626	95185097	95185104	8mer-1a	95185097	95185117	144	-10.32
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6506-5p	95186827	95186833	7mer-m8	95186826	95186848	140	-13.24
CAediting_1014942	chr14_95185073_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6512-3p	95185073	95185079	7mer-m8	95185072	95185093	146	-20.36
CAediting_1014991	chr14_95186855_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6529-3p	95186852	95186858	7mer-m8	95186851	95186873	155	-16.63
CAediting_1014982	chr14_95186804_-	ENSG00000165959.10	ENST00000298912	hsa-miR-660-3p	95186801	95186808	8mer-1a	95186801	95186821	143	-18.16
CAediting_1014983	chr14_95186807_-	ENSG00000165959.10	ENST00000298912	hsa-miR-660-3p	95186801	95186808	8mer-1a	95186801	95186821	143	-18.16
CAediting_1014952	chr14_95186607_-	ENSG00000165959.10	ENST00000298912	hsa-miR-668-3p	95186601	95186608	8mer-1a	95186601	95186623	151	-19.19
CAediting_1014962	chr14_95186676_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6727-3p	95186673	95186679	7mer-1a	95186673	95186692	140	-26.35
CAediting_1014983	chr14_95186807_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6747-3p	95186804	95186811	8mer-1a	95186804	95186825	154	-24.54
CAediting_1014962	chr14_95186676_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6747-3p	95186673	95186680	8mer-1a	95186673	95186695	153	-24.55
CAediting_1014937	chr14_95185024_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6751-3p	95185023	95185029	7mer-m8	95185022	95185042	141	-15.05
CAediting_1014951	chr14_95186601_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6773-3p	95186599	95186606	8mer-1a	95186599	95186620	147	-13.62
CAediting_1014986	chr14_95186817_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6778-3p	95186814	95186820	7mer-m8	95186813	95186833	143	-13.66
CAediting_1014932	chr14_95184982_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6804-3p	95184976	95184983	8mer-1a	95184976	95184998	155	-17.24
CAediting_1014946	chr14_95185100_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6818-3p	95185100	95185106	7mer-m8	95185099	95185120	146	-13.18
CAediting_1014947	chr14_95185104_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6818-3p	95185100	95185106	7mer-m8	95185099	95185120	146	-13.18
CAediting_1014965	chr14_95186689_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6869-5p	95186689	95186695	7mer-m8	95186688	95186710	149	-14.55
CAediting_1014963	chr14_95186683_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6870-3p	95186679	95186685	7mer-m8	95186678	95186699	144	-15.17
CAediting_1014946	chr14_95185100_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6876-3p	95185097	95185104	8mer-1a	95185097	95185120	142	-10.84
CAediting_1014985	chr14_95186812_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6878-3p	95186811	95186818	8mer-1a	95186811	95186831	142	-14.14
CAediting_1014986	chr14_95186817_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6878-3p	95186811	95186818	8mer-1a	95186811	95186831	142	-14.14
CAediting_1014980	chr14_95186788_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6878-3p	95186788	95186794	7mer-m8	95186787	95186809	150	-27.54
CAediting_1014981	chr14_95186793_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6878-3p	95186788	95186794	7mer-m8	95186787	95186809	150	-27.54
CAediting_1014991	chr14_95186855_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6889-3p	95186852	95186858	7mer-m8	95186851	95186872	142	-17.44
CAediting_1014919	chr14_95184863_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7157-5p	95184858	95184864	7mer-m8	95184857	95184879	152	-19.49
CAediting_1014935	chr14_95185006_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7160-5p	95185004	95185010	7mer-m8	95185003	95185023	147	-22.03
CAediting_1014987	chr14_95186828_-	ENSG00000165959.10	ENST00000298912	hsa-miR-762	95186824	95186830	7mer-m8	95186823	95186844	146	-24.96
CAediting_1014942	chr14_95185073_-	ENSG00000165959.10	ENST00000298912	hsa-miR-766-3p	95185072	95185078	7mer-m8	95185071	95185092	147	-21.37
CAediting_1014955	chr14_95186633_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7705	95186632	95186638	7mer-m8	95186631	95186651	154	-14.58
CAediting_1014956	chr14_95186637_-	ENSG00000165959.10	ENST00000298912	hsa-miR-7705	95186632	95186638	7mer-m8	95186631	95186651	154	-14.58
CAediting_1014967	chr14_95186703_-	ENSG00000165959.10	ENST00000298912	hsa-miR-8052	95186697	95186703	7mer-1a	95186697	95186717	149	-19.15
CAediting_1014940	chr14_95185054_-	ENSG00000165959.10	ENST00000298912	hsa-miR-8070	95185054	95185059	6mer	95185053	95185076	150	-22.99
CAediting_1014934	chr14_95184997_-	ENSG00000165959.10	ENST00000298912	hsa-miR-887-5p	95184997	95185003	7mer-m8	95184996	95185015	143	-19.73
CAediting_1014956	chr14_95186637_-	ENSG00000165959.10	ENST00000298912	hsa-miR-9985	95186637	95186643	7mer-m8	95186636	95186654	148	-17.7

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-605-3p	95188285	95188292	8mer-1a	95188285	95188306	147	-17.28
CAediting_748296	chr10_51299626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-605-3p	95187793	95187799	7mer-m8	95187792	95187812	158	-17.76
CAediting_748296	chr10_51299626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-605-3p	95185128	95185134	7mer-m8	95185127	95185148	140	-16.25
CAediting_748296	chr10_51299626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-605-3p	95182542	95182548	7mer-m8	95182541	95182562	140	-16.98
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95190279	95190284	6mer	95190278	95190298	141	-20.82
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95185606	95185611	6mer	95185605	95185626	140	-18.6
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95190923	95190929	7mer-m8	95190922	95190943	142	-11.73
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95183973	95183979	7mer-m8	95183972	95183994	146	-13.6
CAediting_393	chr1_1167164_+	ENSG00000165959.10	ENST00000298912	hsa-miR-200b-3p	95185545	95185551	7mer-m8	95185544	95185566	159	-14.09
CAediting_688081	chr9_63819627_+	ENSG00000165959.10	ENST00000298912	hsa-miR-4477b	95184039	95184045	7mer-m8	95184038	95184058	146	-9.89
CAediting_1229414	chr17_67471546_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95187525	95187531	7mer-m8	95187524	95187549	151	-10.05
CAediting_1229415	chr17_67471547_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95182966	95182973	8mer-1a	95182966	95182991	151	-14.49
CAediting_1160181	chr17_7017644_-	ENSG00000165959.10	ENST00000298912	hsa-miR-195-3p	95191228	95191233	6mer	95191227	95191248	146	-19.44
CAediting_1160181	chr17_7017644_-	ENSG00000165959.10	ENST00000298912	hsa-miR-195-3p	95186501	95186507	7mer-m8	95186500	95186521	165	-21.19
CAediting_1160181	chr17_7017644_-	ENSG00000165959.10	ENST00000298912	hsa-miR-195-3p	95183214	95183219	6mer	95183213	95183234	142	-13.63
CAediting_1351755	chr19_40282625_-	ENSG00000165959.10	ENST00000298912	hsa-miR-641	95187510	95187517	8mer-1a	95187510	95187532	156	-15.92
CAediting_1368054	chr19_46709310_-	ENSG00000165959.10	ENST00000298912	hsa-miR-320e	95187854	95187860	7mer-m8	95187853	95187871	151	-21.44
CAediting_1368054	chr19_46709310_-	ENSG00000165959.10	ENST00000298912	hsa-miR-320e	95191009	95191015	7mer-m8	95191008	95191025	142	-19.67
CAediting_1368054	chr19_46709310_-	ENSG00000165959.10	ENST00000298912	hsa-miR-320e	95184229	95184235	7mer-m8	95184228	95184245	145	-18.09
CAediting_86358	chr1_109598906_+	ENSG00000165959.10	ENST00000298912	hsa-miR-197-5p	95188733	95188739	7mer-m8	95188732	95188754	149	-18.23
CAediting_1399425	chr20_1392958_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6869-5p	95186026	95186032	7mer-m8	95186025	95186046	145	-20.21
CAediting_228905	chr2_188297554_+	ENSG00000165959.10	ENST00000298912	hsa-miR-561-3p	95183246	95183252	7mer-m8	95183245	95183262	143	-14.69
CAediting_396018	chr5_1062918_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4635	95184890	95184896	7mer-m8	95184889	95184909	158	-21.85
CAediting_442554	chr5_154685830_+	ENSG00000165959.10	ENST00000298912	hsa-miR-1303	95185983	95185989	7mer-m8	95185982	95186003	149	-16.56
CAediting_442554	chr5_154685830_+	ENSG00000165959.10	ENST00000298912	hsa-miR-1303	95184001	95184007	7mer-m8	95184000	95184020	152	-17.76
CAediting_580943	chr7_100356700_+	ENSG00000165959.10	ENST00000298912	hsa-miR-6840-3p	95188664	95188670	7mer-m8	95188663	95188684	140	-18.74
CAediting_604450	chr7_133034877_-	ENSG00000165959.10	ENST00000298912	hsa-miR-3654	95187136	95187142	7mer-m8	95187135	95187153	140	-16.87
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95187609	95187616	8mer-1a	95187609	95187631	153	-22.78
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95187165	95187172	8mer-1a	95187165	95187185	153	-26.42
CAediting_573001	chr7_92204086_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1285-5p	95184753	95184760	8mer-1a	95184753	95184773	140	-12.3
CAediting_468389	chr6_31355314_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6891-5p	95190509	95190514	6mer	95190508	95190526	149	-29.33
CAediting_468389	chr6_31355314_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6891-5p	95190461	95190467	7mer-m8	95190460	95190480	148	-21.16
CAediting_1524209	chrX_134546392_-	ENSG00000165959.10	ENST00000298912	hsa-miR-503-5p	95186977	95186982	6mer	95186976	95186998	143	-18.81
CAediting_1524209	chrX_134546392_-	ENSG00000165959.10	ENST00000298912	hsa-miR-503-5p	95186378	95186383	6mer	95186377	95186398	151	-27.91

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1304-3p	95190382	95190388	7mer-m8	95190381	95190401	149	-21.35
CAediting_846604	chr11_93733708_-	ENSG00000165959.10	ENST00000298912	hsa-miR-1304-3p	95190302	95190308	7mer-m8	95190301	95190323	149	-24.06
CAediting_1160181	chr17_7017644_-	ENSG00000165959.10	ENST00000298912	hsa-miR-195-3p	95189541	95189547	7mer-m8	95189540	95189564	145	-7.67
CAediting_393	chr1_1167164_+	ENSG00000165959.10	ENST00000298912	hsa-miR-200b-3p	95184481	95184487	7mer-m8	95184480	95184501	144	-8.74
CAediting_393	chr1_1167164_+	ENSG00000165959.10	ENST00000298912	hsa-miR-200b-3p	95183292	95183298	7mer-m8	95183291	95183316	145	-16.67
CAediting_1306323	chr19_13836462_-	ENSG00000165959.10	ENST00000298912	hsa-miR-27a-3p	95186637	95186643	7mer-m8	95186636	95186658	153	-18.63
CAediting_688080	chr9_63819626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-4477b	95182826	95182833	8mer-1a	95182826	95182847	147	-8.2
CAediting_688081	chr9_63819627_+	ENSG00000165959.10	ENST00000298912	hsa-miR-4477b	95182826	95182833	8mer-1a	95182826	95182847	147	-8.2
CAediting_396018	chr5_1062918_-	ENSG00000165959.10	ENST00000298912	hsa-miR-4635	95190102	95190108	7mer-m8	95190101	95190122	145	-9.26
CAediting_1524209	chrX_134546392_-	ENSG00000165959.10	ENST00000298912	hsa-miR-503-5p	95189298	95189304	7mer-m8	95189297	95189322	152	-25.32
CAediting_1229413	chr17_67471544_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95189157	95189163	7mer-m8	95189156	95189179	149	-8.03
CAediting_1229414	chr17_67471546_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95189157	95189163	7mer-m8	95189156	95189179	149	-8.03
CAediting_1229415	chr17_67471547_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95189157	95189163	7mer-m8	95189156	95189179	149	-8.03
CAediting_1229413	chr17_67471544_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95187411	95187418	8mer-1a	95187411	95187431	152	-14.35
CAediting_1229414	chr17_67471546_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95187411	95187418	8mer-1a	95187411	95187431	152	-14.35
CAediting_1229415	chr17_67471547_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95187411	95187418	8mer-1a	95187411	95187431	152	-14.35
CAediting_1229413	chr17_67471544_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95186983	95186989	7mer-m8	95186982	95187006	140	-5.31
CAediting_1229414	chr17_67471546_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95186983	95186989	7mer-m8	95186982	95187006	140	-5.31
CAediting_1229415	chr17_67471547_+	ENSG00000165959.10	ENST00000298912	hsa-miR-548aa	95186983	95186989	7mer-m8	95186982	95187006	140	-5.31
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95188691	95188698	8mer-1a	95188691	95188714	140	-13.72
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95185476	95185482	7mer-m8	95185475	95185499	148	-15.82
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95184644	95184650	7mer-m8	95184643	95184663	142	-16.4
CAediting_524911	chr7_5495852_-	ENSG00000165959.10	ENST00000298912	hsa-miR-589-3p	95184583	95184590	8mer-1a	95184583	95184606	150	-13.8
CAediting_748296	chr10_51299626_+	ENSG00000165959.10	ENST00000298912	hsa-miR-605-3p	95184306	95184312	7mer-m8	95184305	95184327	155	-13.55
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95189594	95189600	7mer-m8	95189593	95189613	146	-13.39
CAediting_980496	chr14_31014685_-	ENSG00000165959.10	ENST00000298912	hsa-miR-624-3p	95188651	95188657	7mer-m8	95188650	95188669	151	-18.13
CAediting_1351755	chr19_40282625_-	ENSG00000165959.10	ENST00000298912	hsa-miR-641	95190674	95190680	7mer-m8	95190673	95190695	143	-10
CAediting_580943	chr7_100356700_+	ENSG00000165959.10	ENST00000298912	hsa-miR-6840-3p	95187999	95188006	8mer-1a	95187999	95188020	140	-20.81
CAediting_580943	chr7_100356700_+	ENSG00000165959.10	ENST00000298912	hsa-miR-6840-3p	95185748	95185754	7mer-m8	95185747	95185768	146	-19.4
CAediting_580943	chr7_100356700_+	ENSG00000165959.10	ENST00000298912	hsa-miR-6840-3p	95185028	95185034	7mer-m8	95185027	95185052	154	-26.33
CAediting_1399425	chr20_1392958_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6869-5p	95186689	95186695	7mer-m8	95186688	95186710	149	-14.55
CAediting_1399425	chr20_1392958_-	ENSG00000165959.10	ENST00000298912	hsa-miR-6869-5p	95182669	95182675	7mer-m8	95182668	95182689	140	-15.61

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for CLMN

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for CLMN

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_1014918	chr14_95184850_-	0.0453075687064045	0.165945022893178	.	.	.	.
BRCA	CAediting_1014924	chr14_95184891_-	1.09884046462751e-05	0.2464529962131	.	.	.	.
STAD	CAediting_1014924	chr14_95184891_-	0.00035899225356593	0.362284883420182	.	.	.	.
OV	CAediting_1014924	chr14_95184891_-	.	.	.	.	0.00342870901411041	0.406133256760215
BRCA	CAediting_1014925	chr14_95184892_-	2.34106165602675e-05	0.257619866318594	.	.	.	.
BRCA	CAediting_1014934	chr14_95184997_-	0.0282569962479421	0.158764581107651	.	.	.	.
BRCA	CAediting_1014939	chr14_95185044_-	4.16111573086748e-06	0.300747341755508	.	.	.	.
BRCA	CAediting_1014945	chr14_95185097_-	1.63694198726133e-14	0.316168118816436	.	.	.	.
LIHC	CAediting_1014945	chr14_95185097_-	0.0208088420236565	0.281937610177244	.	.	.	.
LUAD	CAediting_1014945	chr14_95185097_-	0.00341317136709284	0.378282780210527	.	.	.	.
STAD	CAediting_1014945	chr14_95185097_-	0.0243902062366083	0.164583460489122	.	.	.	.
PAAD	CAediting_1014945	chr14_95185097_-	0.0137115336970112	0.287323423559856	.	.	.	.
BRCA	CAediting_1014955	chr14_95186633_-	9.64587449942413e-07	0.207270423212066	.	.	0.0175681264208952	0.101315352691725
COAD	CAediting_1014955	chr14_95186633_-	.	.	0.00495461897379928	0.361120413665827	.	.
STAD	CAediting_1014955	chr14_95186633_-	0.0334194686268747	0.148277705970216	.	.	0.0450448840578893	0.139805831783048
KIRC	CAediting_1014955	chr14_95186633_-	0.00880811441409198	0.159133631266235	.	.	.	.
KIRP	CAediting_1014955	chr14_95186633_-	.	.	2.92027758658215e-06	0.522734047833462	.	.
ESCA	CAediting_1014955	chr14_95186633_-	.	.	0.00100602137900897	0.382167567689788	.	.
PAAD	CAediting_1014955	chr14_95186633_-	0.00448144352226887	0.338186050333223	.	.	.	.
SKCM	CAediting_1014955	chr14_95186633_-	.	.	3.79012193469521e-05	0.509347178375711	.	.
BRCA	CAediting_1014957	chr14_95186643_-	5.95772937051098e-14	0.318969194606827	.	.	.	.
LIHC	CAediting_1014957	chr14_95186643_-	0.0222412842530157	0.310643302043594	.	.	.	.
PRAD	CAediting_1014957	chr14_95186643_-	0.0139461503440191	0.20963763413134	.	.	.	.
STAD	CAediting_1014957	chr14_95186643_-	0.0320430617436876	0.149804627591299	.	.	.	.
KIRC	CAediting_1014957	chr14_95186643_-	0.00665580466452238	0.176938764518632	.	.	.	.
OV	CAediting_1014957	chr14_95186643_-	0.00664772312902714	0.273826344631842	.	.	.	.
PAAD	CAediting_1014957	chr14_95186643_-	0.00445990175841942	0.371310565698341	.	.	.	.
BRCA	CAediting_1014965	chr14_95186689_-	1.20277294824344e-16	0.354935063587435	.	.	.	.
STAD	CAediting_1014965	chr14_95186689_-	0.0018206509200005	0.220255548240154	.	.	.	.
PAAD	CAediting_1014965	chr14_95186689_-	0.00405460194333856	0.371821782395819	.	.	.	.
BRCA	CAediting_1014969	chr14_95186711_-	3.3212805433192e-07	0.269882667117244	.	.	.	.
STAD	CAediting_1014969	chr14_95186711_-	0.00776560968013054	0.208465131980359	.	.	.	.
ESCA	CAediting_1014969	chr14_95186711_-	.	.	.	.	0.0137654861761005	0.319092826213302
STAD	CAediting_1014977	chr14_95186780_-	.	.	.	.	0.0111042468849917	0.282550005606666
BRCA	CAediting_1014994	chr14_95186877_-	1.51535675556347e-07	0.256990013864848	.	.	.	.
BRCA	CAediting_1014995	chr14_95186878_-	0.00544123601517314	0.145419798938248	.	.	.	.

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Relation with cancer stages for CLMN

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_1014986	chr14_95186817_-	0.0320287421003123	0.289530482319503
BRCA	pathologic_stage	CAediting_1014995	chr14_95186878_-	0.00790588666329591	0.141761976161115
ESCA	clinical_stage	CAediting_1014955	chr14_95186633_-	0.0233467698905646	-0.517196459569708
LUAD	pathologic_stage	CAediting_1014957	chr14_95186643_-	0.0284008319518886	0.313260187805449
PAAD	pathologic_stage	CAediting_1014945	chr14_95185097_-	0.0481078840423126	0.23215775238107

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Relation with survival for CLMN

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
OV	CAediting_1014955	chr14_95186633_-	0.0250004758446575	0.01949	9.0601
SKCM	CAediting_1014945	chr14_95185097_-	0.0406112394622541	0.0331253	0.100322

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RelatedDrugs for CLMN

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CLMN

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene