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Editing gene: ACBD4 (CAeditome ID:79777)

Gene summary for ACBD4

Gene summary

Gene information	Gene symbol	ACBD4
	Gene ID	79777
	Gene name	acyl-CoA binding domain containing 4
	Synonyms	HMFT0700
	Cytomap	17q21.31
	Type of gene	protein-coding
	Description	acyl-CoA-binding domain-containing protein 4acyl-Coenzyme A binding domain containing 4
	Modification date	20210518
	UniProtAcc	Q8NC06
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ACBD4

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000181513.13

RNA A-to-I editing events in Cancer.

CAediting_1203951(45133440, +), CAediting_1203952(45134154, +), CAediting_1203953(45134265, +), CAediting_1203954(45134277, +), CAediting_1203955(45135246, +), CAediting_1203956(45138527, +), CAediting_1203957(45138535, +), CAediting_1203958(45138536, +), CAediting_1203959(45138614, +), CAediting_1203960(45138615, +), CAediting_1203961(45138631, +), CAediting_1203962(45138661, +), CAediting_1203963(45138665, +), CAediting_1203964(45138667, +), CAediting_1203965(45138668, +), CAediting_1203966(45138673, +), CAediting_1203967(45138697, +), CAediting_1203968(45138708, +), CAediting_1203969(45138713, +), CAediting_1203970(45138738, +), CAediting_1203971(45138778, +), CAediting_1203972(45138929, +), CAediting_1203973(45140203, +), CAediting_1203974(45140207, +), CAediting_1203975(45140209, +), CAediting_1203976(45140237, +), CAediting_1203977(45140239, +), CAediting_1203978(45140245, +), CAediting_1203979(45140248, +), CAediting_1203980(45140283, +), CAediting_1203981(45140284, +), CAediting_1203982(45140313, +), CAediting_1203983(45140323, +), CAediting_1203984(45140344, +), CAediting_1203985(45140357, +), CAediting_1203986(45140363, +), CAediting_1203987(45140366, +), CAediting_1203988(45140380, +), CAediting_1203989(45140392, +), CAediting_1203990(45140400, +), CAediting_1203991(45140403, +), CAediting_1203992(45140419, +), CAediting_1203993(45140433, +), CAediting_1203994(45140442, +), CAediting_1203995(45140443, +), CAediting_1203996(45140455, +), CAediting_1203997(45140464, +), CAediting_1203998(45140516, +), CAediting_1203999(45140533, +), CAediting_1204000(45140561, +), CAediting_1204001(45140570, +), CAediting_1204002(45140575, +), CAediting_1204003(45140599, +), CAediting_1204004(45140634, +), CAediting_1204005(45140798, +), CAediting_1204006(45140803, +), CAediting_1204007(45140826, +), CAediting_1204008(45140827, +), CAediting_1204009(45140829, +), CAediting_1204010(45140834, +), CAediting_1204011(45140835, +), CAediting_1204012(45140837, +), CAediting_1204013(45140848, +), CAediting_1204014(45140852, +), CAediting_1204015(45140853, +), CAediting_1204016(45140854, +), CAediting_1204017(45140855, +), CAediting_1204018(45140857, +), CAediting_1204019(45140861, +), CAediting_1204020(45140875, +), CAediting_1204021(45140882, +), CAediting_1204022(45140893, +), CAediting_1204023(45140898, +), CAediting_1204024(45140906, +), CAediting_1204025(45140915, +), CAediting_1204026(45140919, +), CAediting_1204027(45140925, +), CAediting_1204028(45140933, +), CAediting_1204029(45140934, +), CAediting_1204030(45140935, +), CAediting_1204031(45140941, +), CAediting_1204032(45140945, +), CAediting_1204033(45140947, +), CAediting_1204034(45140954, +), CAediting_1204035(45140958, +), CAediting_1204036(45140963, +), CAediting_1204037(45140973, +), CAediting_1204038(45140978, +), CAediting_1204039(45140983, +), CAediting_1204040(45140993, +), CAediting_1204041(45140995, +), CAediting_1204042(45140997, +), CAediting_1204043(45141000, +), CAediting_1204044(45141001, +), CAediting_1204045(45141003, +), CAediting_1204046(45141008, +), CAediting_1204047(45141424, +), CAediting_1204048(45141432, +), CAediting_1204049(45141433, +), CAediting_1204050(45141455, +), CAediting_1204051(45141459, +), CAediting_1204052(45141473, +), CAediting_1204053(45141525, +), CAediting_1204054(45141526, +), CAediting_1204055(45141562, +), CAediting_1204056(45141574, +), CAediting_1204057(45141579, +), CAediting_1204058(45141584, +), CAediting_1204059(45141604, +), CAediting_1204060(45141605, +), CAediting_1204061(45141608, +), CAediting_1204062(45141624, +), CAediting_1204063(45141641, +), CAediting_1204064(45141643, +), CAediting_1204065(45142119, +), CAediting_1204066(45142129, +), CAediting_1204067(45142138, +), CAediting_1204068(45142143, +), CAediting_1204069(45142146, +), CAediting_1204070(45142183, +), CAediting_1204071(45142192, +), CAediting_1204072(45142194, +), CAediting_1204073(45142197, +), CAediting_1204074(45142203, +), CAediting_1204075(45142206, +), CAediting_1204076(45142207, +), CAediting_1204077(45142209, +), CAediting_1204078(45142215, +), CAediting_1204079(45142216, +), CAediting_1204080(45142217, +), CAediting_1204081(45142231, +), CAediting_1204082(45142232, +), CAediting_1204083(45142233, +), CAediting_1204084(45142234, +), CAediting_1204085(45142235, +), CAediting_1204086(45142237, +), CAediting_1204087(45142241, +), CAediting_1204088(45142242, +), CAediting_1204089(45142243, +), CAediting_1204090(45142246, +), CAediting_1204091(45142262, +), CAediting_1204092(45142272, +), CAediting_1204093(45142278, +), CAediting_1204094(45142282, +), CAediting_1204095(45142286, +), CAediting_1204096(45142302, +), CAediting_1204097(45142304, +), CAediting_1204098(45142305, +), CAediting_1204099(45142313, +), CAediting_1204100(45142314, +), CAediting_1204101(45142318, +), CAediting_1204102(45142321, +), CAediting_1204103(45142327, +), CAediting_1204104(45142334, +), CAediting_1204105(45142338, +), CAediting_1204106(45142343, +), CAediting_1204107(45142345, +), CAediting_1204108(45142348, +), CAediting_1204109(45142358, +), CAediting_1204110(45142375, +), CAediting_1204111(45142380, +), CAediting_1204112(45142381, +), CAediting_1204113(45142587, +), CAediting_1204114(45142601, +), CAediting_1204115(45142606, +), CAediting_1204116(45142610, +), CAediting_1204117(45142620, +), CAediting_1204118(45142621, +), CAediting_1204119(45142625, +), CAediting_1204120(45142630, +), CAediting_1204121(45142636, +), CAediting_1204122(45142656, +), CAediting_1204123(45142657, +), CAediting_1204124(45142660, +), CAediting_1204125(45142673, +), CAediting_1204126(45142685, +), CAediting_1204127(45142692, +), CAediting_1204128(45142695, +), CAediting_1204129(45142697, +), CAediting_1204130(45142705, +), CAediting_1204131(45142711, +), CAediting_1204132(45142721, +), CAediting_1204133(45142722, +), CAediting_1204134(45142733, +), CAediting_1204135(45142739, +), CAediting_1204136(45142742, +), CAediting_1204137(45142756, +), CAediting_1204138(45142759, +), CAediting_1204139(45142788, +), CAediting_1204140(45142796, +), CAediting_1204141(45142799, +), CAediting_1204142(45142817, +), CAediting_1204143(45142818, +), CAediting_1204144(45142827, +), CAediting_1204145(45142830, +), CAediting_1204146(45142832, +), CAediting_1204147(45142843, +),

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RNA editing positional annotations for ACBD4 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1204113	chr17_45142587_+	nonsynonymous SNV	ENST00000376955.7	c.A784G	p.T262A	D	B	N
CAediting_1204113	chr17_45142587_+	nonsynonymous SNV	ENST00000619916.3	c.A784G	p.T262A	D	B	N
CAediting_1204115	chr17_45142606_+	nonsynonymous SNV	ENST00000376955.7	c.A803G	p.E268G	D	B	N
CAediting_1204115	chr17_45142606_+	nonsynonymous SNV	ENST00000619916.3	c.A803G	p.E268G	D	B	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1203951	chr17_45133440_+	ncRNA_intronic
CAediting_1203952	chr17_45134154_+	ncRNA_intronic
CAediting_1203953	chr17_45134265_+	ncRNA_intronic
CAediting_1203954	chr17_45134277_+	ncRNA_intronic
CAediting_1203955	chr17_45135246_+	ncRNA_intronic
CAediting_1203956	chr17_45138527_+	ncRNA_exonic
CAediting_1203957	chr17_45138535_+	ncRNA_exonic
CAediting_1203958	chr17_45138536_+	ncRNA_exonic
CAediting_1203959	chr17_45138614_+	ncRNA_intronic
CAediting_1203960	chr17_45138615_+	ncRNA_intronic
CAediting_1203961	chr17_45138631_+	ncRNA_intronic
CAediting_1203962	chr17_45138661_+	ncRNA_intronic
CAediting_1203963	chr17_45138665_+	ncRNA_intronic
CAediting_1203964	chr17_45138667_+	ncRNA_intronic
CAediting_1203965	chr17_45138668_+	ncRNA_intronic
CAediting_1203966	chr17_45138673_+	ncRNA_intronic
CAediting_1203967	chr17_45138697_+	ncRNA_intronic
CAediting_1203968	chr17_45138708_+	ncRNA_intronic
CAediting_1203969	chr17_45138713_+	ncRNA_intronic
CAediting_1203970	chr17_45138738_+	ncRNA_intronic
CAediting_1203971	chr17_45138778_+	ncRNA_intronic
CAediting_1203972	chr17_45138929_+	ncRNA_intronic
CAediting_1203973	chr17_45140203_+	ncRNA_intronic
CAediting_1203974	chr17_45140207_+	ncRNA_intronic
CAediting_1203975	chr17_45140209_+	ncRNA_intronic
CAediting_1203976	chr17_45140237_+	ncRNA_intronic
CAediting_1203977	chr17_45140239_+	ncRNA_intronic
CAediting_1203978	chr17_45140245_+	ncRNA_intronic
CAediting_1203979	chr17_45140248_+	ncRNA_intronic
CAediting_1203980	chr17_45140283_+	ncRNA_intronic
CAediting_1203981	chr17_45140284_+	ncRNA_intronic
CAediting_1203982	chr17_45140313_+	ncRNA_intronic
CAediting_1203983	chr17_45140323_+	ncRNA_intronic
CAediting_1203984	chr17_45140344_+	ncRNA_intronic
CAediting_1203985	chr17_45140357_+	ncRNA_intronic
CAediting_1203986	chr17_45140363_+	ncRNA_intronic
CAediting_1203987	chr17_45140366_+	ncRNA_intronic
CAediting_1203988	chr17_45140380_+	ncRNA_intronic
CAediting_1203989	chr17_45140392_+	ncRNA_intronic
CAediting_1203990	chr17_45140400_+	ncRNA_intronic
CAediting_1203991	chr17_45140403_+	ncRNA_intronic
CAediting_1203992	chr17_45140419_+	ncRNA_intronic
CAediting_1203993	chr17_45140433_+	ncRNA_intronic
CAediting_1203994	chr17_45140442_+	ncRNA_intronic
CAediting_1203995	chr17_45140443_+	ncRNA_intronic
CAediting_1203996	chr17_45140455_+	ncRNA_intronic
CAediting_1203997	chr17_45140464_+	ncRNA_intronic
CAediting_1203998	chr17_45140516_+	ncRNA_intronic
CAediting_1203999	chr17_45140533_+	ncRNA_intronic
CAediting_1204000	chr17_45140561_+	ncRNA_intronic
CAediting_1204001	chr17_45140570_+	ncRNA_intronic
CAediting_1204002	chr17_45140575_+	ncRNA_intronic
CAediting_1204003	chr17_45140599_+	ncRNA_intronic
CAediting_1204004	chr17_45140634_+	ncRNA_intronic
CAediting_1204005	chr17_45140798_+	ncRNA_intronic
CAediting_1204006	chr17_45140803_+	ncRNA_intronic
CAediting_1204007	chr17_45140826_+	ncRNA_intronic
CAediting_1204008	chr17_45140827_+	ncRNA_intronic
CAediting_1204009	chr17_45140829_+	ncRNA_intronic
CAediting_1204010	chr17_45140834_+	ncRNA_intronic
CAediting_1204011	chr17_45140835_+	ncRNA_intronic
CAediting_1204012	chr17_45140837_+	ncRNA_intronic
CAediting_1204013	chr17_45140848_+	ncRNA_intronic
CAediting_1204014	chr17_45140852_+	ncRNA_intronic
CAediting_1204015	chr17_45140853_+	ncRNA_intronic
CAediting_1204016	chr17_45140854_+	ncRNA_intronic
CAediting_1204017	chr17_45140855_+	ncRNA_intronic
CAediting_1204018	chr17_45140857_+	ncRNA_intronic
CAediting_1204019	chr17_45140861_+	ncRNA_intronic
CAediting_1204020	chr17_45140875_+	ncRNA_intronic
CAediting_1204021	chr17_45140882_+	ncRNA_intronic
CAediting_1204022	chr17_45140893_+	ncRNA_intronic
CAediting_1204023	chr17_45140898_+	ncRNA_intronic
CAediting_1204024	chr17_45140906_+	ncRNA_intronic
CAediting_1204025	chr17_45140915_+	ncRNA_intronic
CAediting_1204026	chr17_45140919_+	ncRNA_intronic
CAediting_1204027	chr17_45140925_+	ncRNA_intronic
CAediting_1204028	chr17_45140933_+	ncRNA_intronic
CAediting_1204029	chr17_45140934_+	ncRNA_intronic
CAediting_1204030	chr17_45140935_+	ncRNA_intronic
CAediting_1204031	chr17_45140941_+	ncRNA_intronic
CAediting_1204032	chr17_45140945_+	ncRNA_intronic
CAediting_1204033	chr17_45140947_+	ncRNA_intronic
CAediting_1204034	chr17_45140954_+	ncRNA_intronic
CAediting_1204035	chr17_45140958_+	ncRNA_intronic
CAediting_1204036	chr17_45140963_+	ncRNA_intronic
CAediting_1204037	chr17_45140973_+	ncRNA_intronic
CAediting_1204038	chr17_45140978_+	ncRNA_intronic
CAediting_1204039	chr17_45140983_+	ncRNA_intronic
CAediting_1204040	chr17_45140993_+	ncRNA_intronic
CAediting_1204041	chr17_45140995_+	ncRNA_intronic
CAediting_1204042	chr17_45140997_+	ncRNA_intronic
CAediting_1204043	chr17_45141000_+	ncRNA_intronic
CAediting_1204044	chr17_45141001_+	ncRNA_intronic
CAediting_1204045	chr17_45141003_+	ncRNA_intronic
CAediting_1204046	chr17_45141008_+	ncRNA_intronic
CAediting_1204047	chr17_45141424_+	ncRNA_intronic
CAediting_1204048	chr17_45141432_+	ncRNA_intronic
CAediting_1204049	chr17_45141433_+	ncRNA_intronic
CAediting_1204050	chr17_45141455_+	ncRNA_intronic
CAediting_1204051	chr17_45141459_+	ncRNA_intronic
CAediting_1204052	chr17_45141473_+	ncRNA_intronic
CAediting_1204053	chr17_45141525_+	ncRNA_intronic
CAediting_1204054	chr17_45141526_+	ncRNA_intronic
CAediting_1204055	chr17_45141562_+	ncRNA_intronic
CAediting_1204056	chr17_45141574_+	ncRNA_intronic
CAediting_1204057	chr17_45141579_+	ncRNA_intronic
CAediting_1204058	chr17_45141584_+	ncRNA_intronic
CAediting_1204059	chr17_45141604_+	ncRNA_intronic
CAediting_1204060	chr17_45141605_+	ncRNA_intronic
CAediting_1204061	chr17_45141608_+	ncRNA_intronic
CAediting_1204062	chr17_45141624_+	ncRNA_intronic
CAediting_1204063	chr17_45141641_+	ncRNA_intronic
CAediting_1204064	chr17_45141643_+	ncRNA_intronic
CAediting_1204065	chr17_45142119_+	ncRNA_intronic
CAediting_1204066	chr17_45142129_+	ncRNA_intronic
CAediting_1204067	chr17_45142138_+	ncRNA_intronic
CAediting_1204068	chr17_45142143_+	ncRNA_intronic
CAediting_1204069	chr17_45142146_+	ncRNA_intronic
CAediting_1204070	chr17_45142183_+	ncRNA_intronic
CAediting_1204071	chr17_45142192_+	ncRNA_intronic
CAediting_1204072	chr17_45142194_+	ncRNA_intronic
CAediting_1204073	chr17_45142197_+	ncRNA_intronic
CAediting_1204074	chr17_45142203_+	ncRNA_intronic
CAediting_1204075	chr17_45142206_+	ncRNA_intronic
CAediting_1204076	chr17_45142207_+	ncRNA_intronic
CAediting_1204077	chr17_45142209_+	ncRNA_intronic
CAediting_1204078	chr17_45142215_+	ncRNA_intronic
CAediting_1204079	chr17_45142216_+	ncRNA_intronic
CAediting_1204080	chr17_45142217_+	ncRNA_intronic
CAediting_1204081	chr17_45142231_+	ncRNA_intronic
CAediting_1204082	chr17_45142232_+	ncRNA_intronic
CAediting_1204083	chr17_45142233_+	ncRNA_intronic
CAediting_1204084	chr17_45142234_+	ncRNA_intronic
CAediting_1204085	chr17_45142235_+	ncRNA_intronic
CAediting_1204086	chr17_45142237_+	ncRNA_intronic
CAediting_1204087	chr17_45142241_+	ncRNA_intronic
CAediting_1204088	chr17_45142242_+	ncRNA_intronic
CAediting_1204089	chr17_45142243_+	ncRNA_intronic
CAediting_1204090	chr17_45142246_+	ncRNA_intronic
CAediting_1204091	chr17_45142262_+	ncRNA_intronic
CAediting_1204092	chr17_45142272_+	ncRNA_intronic
CAediting_1204093	chr17_45142278_+	ncRNA_intronic
CAediting_1204094	chr17_45142282_+	ncRNA_intronic
CAediting_1204095	chr17_45142286_+	ncRNA_intronic
CAediting_1204096	chr17_45142302_+	ncRNA_intronic
CAediting_1204097	chr17_45142304_+	ncRNA_intronic
CAediting_1204098	chr17_45142305_+	ncRNA_intronic
CAediting_1204099	chr17_45142313_+	ncRNA_intronic
CAediting_1204100	chr17_45142314_+	ncRNA_intronic
CAediting_1204101	chr17_45142318_+	ncRNA_intronic
CAediting_1204102	chr17_45142321_+	ncRNA_intronic
CAediting_1204103	chr17_45142327_+	ncRNA_intronic
CAediting_1204104	chr17_45142334_+	ncRNA_intronic
CAediting_1204105	chr17_45142338_+	ncRNA_intronic
CAediting_1204106	chr17_45142343_+	ncRNA_intronic
CAediting_1204107	chr17_45142345_+	ncRNA_intronic
CAediting_1204108	chr17_45142348_+	ncRNA_intronic
CAediting_1204109	chr17_45142358_+	ncRNA_intronic
CAediting_1204110	chr17_45142375_+	ncRNA_intronic
CAediting_1204111	chr17_45142380_+	ncRNA_intronic
CAediting_1204112	chr17_45142381_+	ncRNA_intronic
CAediting_1204113	chr17_45142587_+	exonic
CAediting_1204114	chr17_45142601_+	exonic
CAediting_1204115	chr17_45142606_+	exonic
CAediting_1204116	chr17_45142610_+	exonic
CAediting_1204117	chr17_45142620_+	ncRNA_intronic
CAediting_1204118	chr17_45142621_+	ncRNA_intronic
CAediting_1204119	chr17_45142625_+	ncRNA_intronic
CAediting_1204120	chr17_45142630_+	ncRNA_intronic
CAediting_1204121	chr17_45142636_+	ncRNA_intronic
CAediting_1204122	chr17_45142656_+	ncRNA_intronic
CAediting_1204123	chr17_45142657_+	ncRNA_intronic
CAediting_1204124	chr17_45142660_+	ncRNA_intronic
CAediting_1204125	chr17_45142673_+	ncRNA_intronic
CAediting_1204126	chr17_45142685_+	ncRNA_intronic
CAediting_1204127	chr17_45142692_+	ncRNA_intronic
CAediting_1204128	chr17_45142695_+	ncRNA_intronic
CAediting_1204129	chr17_45142697_+	ncRNA_intronic
CAediting_1204130	chr17_45142705_+	ncRNA_intronic
CAediting_1204131	chr17_45142711_+	ncRNA_intronic
CAediting_1204132	chr17_45142721_+	ncRNA_intronic
CAediting_1204133	chr17_45142722_+	ncRNA_intronic
CAediting_1204134	chr17_45142733_+	ncRNA_intronic
CAediting_1204135	chr17_45142739_+	ncRNA_intronic
CAediting_1204136	chr17_45142742_+	ncRNA_intronic
CAediting_1204137	chr17_45142756_+	ncRNA_intronic
CAediting_1204138	chr17_45142759_+	ncRNA_intronic
CAediting_1204139	chr17_45142788_+	ncRNA_intronic
CAediting_1204140	chr17_45142796_+	ncRNA_intronic
CAediting_1204141	chr17_45142799_+	ncRNA_intronic
CAediting_1204142	chr17_45142817_+	ncRNA_intronic
CAediting_1204143	chr17_45142818_+	ncRNA_intronic
CAediting_1204144	chr17_45142827_+	ncRNA_intronic
CAediting_1204145	chr17_45142830_+	ncRNA_intronic
CAediting_1204146	chr17_45142832_+	ncRNA_intronic
CAediting_1204147	chr17_45142843_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1203952	chr17_45134154_+	SINE	Alu	AluJo
CAediting_1203953	chr17_45134265_+	SINE	Alu	AluJo
CAediting_1203954	chr17_45134277_+	SINE	Alu	AluJo
CAediting_1203955	chr17_45135246_+	SINE	Alu	AluSx
CAediting_1203956	chr17_45138527_+	SINE	Alu	AluSx
CAediting_1203957	chr17_45138535_+	SINE	Alu	AluSx
CAediting_1203958	chr17_45138536_+	SINE	Alu	AluSx
CAediting_1203959	chr17_45138614_+	SINE	Alu	AluSx
CAediting_1203960	chr17_45138615_+	SINE	Alu	AluSx
CAediting_1203961	chr17_45138631_+	SINE	Alu	AluSx
CAediting_1203962	chr17_45138661_+	SINE	Alu	AluSx
CAediting_1203963	chr17_45138665_+	SINE	Alu	AluSx
CAediting_1203964	chr17_45138667_+	SINE	Alu	AluSx
CAediting_1203965	chr17_45138668_+	SINE	Alu	AluSx
CAediting_1203966	chr17_45138673_+	SINE	Alu	AluSx
CAediting_1203967	chr17_45138697_+	SINE	Alu	AluSx
CAediting_1203968	chr17_45138708_+	SINE	Alu	AluSx
CAediting_1203969	chr17_45138713_+	SINE	Alu	AluSx
CAediting_1203970	chr17_45138738_+	SINE	Alu	AluSx
CAediting_1203971	chr17_45138778_+	SINE	Alu	AluSx
CAediting_1203973	chr17_45140203_+	SINE	Alu	AluSc
CAediting_1203974	chr17_45140207_+	SINE	Alu	AluSc
CAediting_1203975	chr17_45140209_+	SINE	Alu	AluSc
CAediting_1203976	chr17_45140237_+	SINE	Alu	AluSc
CAediting_1203977	chr17_45140239_+	SINE	Alu	AluSc
CAediting_1203978	chr17_45140245_+	SINE	Alu	AluSc
CAediting_1203979	chr17_45140248_+	SINE	Alu	AluSc
CAediting_1203980	chr17_45140283_+	SINE	Alu	AluSc
CAediting_1203981	chr17_45140284_+	SINE	Alu	AluSc
CAediting_1203982	chr17_45140313_+	SINE	Alu	AluSc
CAediting_1203983	chr17_45140323_+	SINE	Alu	AluSc
CAediting_1203984	chr17_45140344_+	SINE	Alu	AluSc
CAediting_1203985	chr17_45140357_+	SINE	Alu	AluSc
CAediting_1203986	chr17_45140363_+	SINE	Alu	AluSc
CAediting_1203987	chr17_45140366_+	SINE	Alu	AluSc
CAediting_1203988	chr17_45140380_+	SINE	Alu	AluSc
CAediting_1203989	chr17_45140392_+	SINE	Alu	AluSc
CAediting_1203990	chr17_45140400_+	SINE	Alu	AluSc
CAediting_1203991	chr17_45140403_+	SINE	Alu	AluSc
CAediting_1203992	chr17_45140419_+	SINE	Alu	AluSc
CAediting_1203993	chr17_45140433_+	SINE	Alu	AluSc
CAediting_1203994	chr17_45140442_+	SINE	Alu	AluSc
CAediting_1203995	chr17_45140443_+	SINE	Alu	AluSc
CAediting_1203996	chr17_45140455_+	SINE	Alu	AluSc
CAediting_1203997	chr17_45140464_+	SINE	Alu	AluSc
CAediting_1204000	chr17_45140561_+	SINE	Alu	FLAM_C
CAediting_1204001	chr17_45140570_+	SINE	Alu	FLAM_C
CAediting_1204002	chr17_45140575_+	SINE	Alu	FLAM_C
CAediting_1204003	chr17_45140599_+	SINE	Alu	FLAM_C
CAediting_1204004	chr17_45140634_+	SINE	Alu	FLAM_C
CAediting_1204005	chr17_45140798_+	SINE	Alu	AluSx1
CAediting_1204006	chr17_45140803_+	SINE	Alu	AluSx1
CAediting_1204007	chr17_45140826_+	SINE	Alu	AluSx1
CAediting_1204008	chr17_45140827_+	SINE	Alu	AluSx1
CAediting_1204009	chr17_45140829_+	SINE	Alu	AluSx1
CAediting_1204010	chr17_45140834_+	SINE	Alu	AluSx1
CAediting_1204011	chr17_45140835_+	SINE	Alu	AluSx1
CAediting_1204012	chr17_45140837_+	SINE	Alu	AluSx1
CAediting_1204013	chr17_45140848_+	SINE	Alu	AluSx1
CAediting_1204014	chr17_45140852_+	SINE	Alu	AluSx1
CAediting_1204015	chr17_45140853_+	SINE	Alu	AluSx1
CAediting_1204016	chr17_45140854_+	SINE	Alu	AluSx1
CAediting_1204017	chr17_45140855_+	SINE	Alu	AluSx1
CAediting_1204018	chr17_45140857_+	SINE	Alu	AluSx1
CAediting_1204019	chr17_45140861_+	SINE	Alu	AluSx1
CAediting_1204020	chr17_45140875_+	SINE	Alu	AluSx1
CAediting_1204021	chr17_45140882_+	SINE	Alu	AluSx1
CAediting_1204022	chr17_45140893_+	SINE	Alu	AluSx1
CAediting_1204023	chr17_45140898_+	SINE	Alu	AluSx1
CAediting_1204024	chr17_45140906_+	SINE	Alu	AluSx1
CAediting_1204025	chr17_45140915_+	SINE	Alu	AluSx1
CAediting_1204026	chr17_45140919_+	SINE	Alu	AluSx1
CAediting_1204027	chr17_45140925_+	SINE	Alu	AluSx1
CAediting_1204028	chr17_45140933_+	SINE	Alu	AluSx1
CAediting_1204029	chr17_45140934_+	SINE	Alu	AluSx1
CAediting_1204030	chr17_45140935_+	SINE	Alu	AluSx1
CAediting_1204031	chr17_45140941_+	SINE	Alu	AluSx1
CAediting_1204032	chr17_45140945_+	SINE	Alu	AluSx1
CAediting_1204033	chr17_45140947_+	SINE	Alu	AluSx1
CAediting_1204034	chr17_45140954_+	SINE	Alu	AluSx1
CAediting_1204035	chr17_45140958_+	SINE	Alu	AluSx1
CAediting_1204036	chr17_45140963_+	SINE	Alu	AluSx1
CAediting_1204037	chr17_45140973_+	SINE	Alu	AluSx1
CAediting_1204038	chr17_45140978_+	SINE	Alu	AluSx1
CAediting_1204039	chr17_45140983_+	SINE	Alu	AluSx1
CAediting_1204040	chr17_45140993_+	SINE	Alu	AluSx1
CAediting_1204041	chr17_45140995_+	SINE	Alu	AluSx1
CAediting_1204042	chr17_45140997_+	SINE	Alu	AluSx1
CAediting_1204043	chr17_45141000_+	SINE	Alu	AluSx1
CAediting_1204044	chr17_45141001_+	SINE	Alu	AluSx1
CAediting_1204045	chr17_45141003_+	SINE	Alu	AluSx1
CAediting_1204046	chr17_45141008_+	SINE	Alu	AluSx1
CAediting_1204047	chr17_45141424_+	SINE	Alu	AluJo
CAediting_1204048	chr17_45141432_+	SINE	Alu	AluJo
CAediting_1204049	chr17_45141433_+	SINE	Alu	AluJo
CAediting_1204050	chr17_45141455_+	SINE	Alu	AluJo
CAediting_1204051	chr17_45141459_+	SINE	Alu	AluJo
CAediting_1204052	chr17_45141473_+	SINE	Alu	AluJo
CAediting_1204053	chr17_45141525_+	SINE	Alu	AluJo
CAediting_1204054	chr17_45141526_+	SINE	Alu	AluJo
CAediting_1204055	chr17_45141562_+	SINE	Alu	AluJo
CAediting_1204056	chr17_45141574_+	SINE	Alu	AluJo
CAediting_1204057	chr17_45141579_+	SINE	Alu	AluJo
CAediting_1204058	chr17_45141584_+	SINE	Alu	AluJo
CAediting_1204059	chr17_45141604_+	SINE	Alu	AluJo
CAediting_1204060	chr17_45141605_+	SINE	Alu	AluJo
CAediting_1204061	chr17_45141608_+	SINE	Alu	AluJo
CAediting_1204062	chr17_45141624_+	SINE	Alu	AluJo
CAediting_1204063	chr17_45141641_+	SINE	Alu	AluJo
CAediting_1204064	chr17_45141643_+	SINE	Alu	AluJo
CAediting_1204065	chr17_45142119_+	SINE	Alu	AluSx1
CAediting_1204066	chr17_45142129_+	SINE	Alu	AluSx1
CAediting_1204067	chr17_45142138_+	SINE	Alu	AluSx1
CAediting_1204068	chr17_45142143_+	SINE	Alu	AluSx1
CAediting_1204069	chr17_45142146_+	SINE	Alu	AluSx1
CAediting_1204070	chr17_45142183_+	SINE	Alu	AluSx1
CAediting_1204071	chr17_45142192_+	SINE	Alu	AluSx1
CAediting_1204072	chr17_45142194_+	SINE	Alu	AluSx1
CAediting_1204073	chr17_45142197_+	SINE	Alu	AluSx1
CAediting_1204074	chr17_45142203_+	SINE	Alu	AluSx1
CAediting_1204075	chr17_45142206_+	SINE	Alu	AluSx1
CAediting_1204076	chr17_45142207_+	SINE	Alu	AluSx1
CAediting_1204077	chr17_45142209_+	SINE	Alu	AluSx1
CAediting_1204078	chr17_45142215_+	SINE	Alu	AluSx1
CAediting_1204079	chr17_45142216_+	SINE	Alu	AluSx1
CAediting_1204080	chr17_45142217_+	SINE	Alu	AluSx1
CAediting_1204081	chr17_45142231_+	SINE	Alu	AluSx1
CAediting_1204082	chr17_45142232_+	SINE	Alu	AluSx1
CAediting_1204083	chr17_45142233_+	SINE	Alu	AluSx1
CAediting_1204084	chr17_45142234_+	SINE	Alu	AluSx1
CAediting_1204085	chr17_45142235_+	SINE	Alu	AluSx1
CAediting_1204086	chr17_45142237_+	SINE	Alu	AluSx1
CAediting_1204087	chr17_45142241_+	SINE	Alu	AluSx1
CAediting_1204088	chr17_45142242_+	SINE	Alu	AluSx1
CAediting_1204089	chr17_45142243_+	SINE	Alu	AluSx1
CAediting_1204090	chr17_45142246_+	SINE	Alu	AluSx1
CAediting_1204091	chr17_45142262_+	SINE	Alu	AluSx1
CAediting_1204092	chr17_45142272_+	SINE	Alu	AluSx1
CAediting_1204093	chr17_45142278_+	SINE	Alu	AluSx1
CAediting_1204094	chr17_45142282_+	SINE	Alu	AluSx1
CAediting_1204095	chr17_45142286_+	SINE	Alu	AluSx1
CAediting_1204096	chr17_45142302_+	SINE	Alu	AluSx1
CAediting_1204097	chr17_45142304_+	SINE	Alu	AluSx1
CAediting_1204098	chr17_45142305_+	SINE	Alu	AluSx1
CAediting_1204099	chr17_45142313_+	SINE	Alu	AluSx1
CAediting_1204100	chr17_45142314_+	SINE	Alu	AluSx1
CAediting_1204101	chr17_45142318_+	SINE	Alu	AluSx1
CAediting_1204102	chr17_45142321_+	SINE	Alu	AluSx1
CAediting_1204103	chr17_45142327_+	SINE	Alu	AluSx1
CAediting_1204104	chr17_45142334_+	SINE	Alu	AluSx1
CAediting_1204105	chr17_45142338_+	SINE	Alu	AluSx1
CAediting_1204106	chr17_45142343_+	SINE	Alu	AluSx1
CAediting_1204107	chr17_45142345_+	SINE	Alu	AluSx1
CAediting_1204108	chr17_45142348_+	SINE	Alu	AluSx1
CAediting_1204109	chr17_45142358_+	SINE	Alu	AluSx1
CAediting_1204110	chr17_45142375_+	SINE	Alu	AluSx1
CAediting_1204111	chr17_45142380_+	SINE	Alu	AluSx1
CAediting_1204112	chr17_45142381_+	SINE	Alu	AluSx1
CAediting_1204113	chr17_45142587_+	SINE	Alu	AluSg7
CAediting_1204114	chr17_45142601_+	SINE	Alu	AluSg7
CAediting_1204115	chr17_45142606_+	SINE	Alu	AluSg7
CAediting_1204116	chr17_45142610_+	SINE	Alu	AluSg7
CAediting_1204117	chr17_45142620_+	SINE	Alu	AluSg7
CAediting_1204118	chr17_45142621_+	SINE	Alu	AluSg7
CAediting_1204119	chr17_45142625_+	SINE	Alu	AluSg7
CAediting_1204120	chr17_45142630_+	SINE	Alu	AluSg7
CAediting_1204121	chr17_45142636_+	SINE	Alu	AluSg7
CAediting_1204122	chr17_45142656_+	SINE	Alu	AluSg7
CAediting_1204123	chr17_45142657_+	SINE	Alu	AluSg7
CAediting_1204124	chr17_45142660_+	SINE	Alu	AluSg7
CAediting_1204125	chr17_45142673_+	SINE	Alu	AluSg7
CAediting_1204126	chr17_45142685_+	SINE	Alu	AluSg7
CAediting_1204127	chr17_45142692_+	SINE	Alu	AluSg7
CAediting_1204128	chr17_45142695_+	SINE	Alu	AluSg7
CAediting_1204129	chr17_45142697_+	SINE	Alu	AluSg7
CAediting_1204130	chr17_45142705_+	SINE	Alu	AluSg7
CAediting_1204131	chr17_45142711_+	SINE	Alu	AluSg7
CAediting_1204132	chr17_45142721_+	SINE	Alu	AluSg7
CAediting_1204133	chr17_45142722_+	SINE	Alu	AluSg7
CAediting_1204134	chr17_45142733_+	SINE	Alu	AluSg7
CAediting_1204135	chr17_45142739_+	SINE	Alu	AluSg7
CAediting_1204136	chr17_45142742_+	SINE	Alu	AluSg7
CAediting_1204137	chr17_45142756_+	SINE	Alu	AluSg7
CAediting_1204138	chr17_45142759_+	SINE	Alu	AluSg7
CAediting_1204139	chr17_45142788_+	SINE	Alu	AluSg7
CAediting_1204140	chr17_45142796_+	SINE	Alu	AluSg7
CAediting_1204141	chr17_45142799_+	SINE	Alu	AluSg7
CAediting_1204142	chr17_45142817_+	SINE	Alu	AluSg7
CAediting_1204143	chr17_45142818_+	SINE	Alu	AluSg7
CAediting_1204144	chr17_45142827_+	SINE	Alu	AluSg7
CAediting_1204145	chr17_45142830_+	SINE	Alu	AluSg7
CAediting_1204146	chr17_45142832_+	SINE	Alu	AluSg7
CAediting_1204147	chr17_45142843_+	SINE	Alu	AluSg7

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RNA A-to-I editing events in the alternative splicing sites for ACBD4

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000181513.13.ACBD4.

Correlation between RNA A-to-I editing and PSI for ENSG00000181513.13.ACBD4.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ACBD4

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

BLCA.CAediting_1204119.ENSG00000181513.ACBD4.png
Soverview

OV.CAediting_1204092.ENSG00000181513.ACBD4.png
Soverview

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Protein coding region RNA A-to-I editings for ACBD4

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ACBD4

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-17-3p	45142629	45142635	7mer-m8	45142615	45142636	150.00	-17.16
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-485-5p	45142633	45142639	7mer-m8	45142618	45142640	157.00	-19.47
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6884-5p	45142633	45142639	7mer-m8	45142618	45142640	152.00	-24.34
CAediting_1204123	chr17_45142657_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4539	45142651	45142656	6mer	45142637	45142657	142.00	-23.38
CAediting_1204126	chr17_45142685_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4691-3p	45142682	45142688	7mer-m8	45142662	45142689	150.00	-26.62
CAediting_1204134	chr17_45142733_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4801	45142728	45142733	6mer	45142713	45142734	147.00	-12.59
CAediting_1204138	chr17_45142759_+	ENSG00000181513.13	ENST00000376955	hsa-miR-433-5p	45142753	45142759	7mer-m8	45142737	45142760	163.00	-25.86
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-326	45142812	45142818	7mer-m8	45142800	45142819	140.00	-14.60
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-330-5p	45142812	45142818	7mer-m8	45142798	45142819	140.00	-21.93
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4314	45142811	45142817	7mer-m8	45142801	45142818	140.00	-21.61
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-514a-5p	45142813	45142819	7mer-m8	45142797	45142820	146.00	-18.62
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-514a-5p	45142813	45142819	7mer-m8	45142797	45142820	146.00	-18.62
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-514a-5p	45142813	45142819	7mer-m8	45142797	45142820	146.00	-18.62
CAediting_1204143	chr17_45142818_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3189-3p	45142812	45142818	7mer-m8	45142796	45142819	149.00	-26.69
CAediting_1204143	chr17_45142818_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6813-3p	45142813	45142819	7mer-m8	45142800	45142820	140.00	-12.15
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4722-3p	45142827	45142833	7mer-m8	45142813	45142834	150.00	-23.23
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4763-5p	45142828	45142834	7mer-m8	45142816	45142835	148.00	-26.91
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4769-3p	45142826	45142832	7mer-m8	45142812	45142833	152.00	-19.83
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6727-3p	45142827	45142833	7mer-m8	45142815	45142834	148.00	-21.60
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6817-5p	45142826	45142832	7mer-m8	45142807	45142833	148.00	-24.37
CAediting_1204130	chr17_45142705_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4767	45142699	45142705	7mer-m8	45142684	45142706	153.00	-26.31
CAediting_1204130	chr17_45142705_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6499-5p	45142698	45142704	7mer-m8	45142682	45142705	142.00	-20.92
CAediting_1204132	chr17_45142721_+	ENSG00000181513.13	ENST00000376955	hsa-miR-34a-3p	45142717	45142723	7mer-m8	45142702	45142724	145.00	-11.29
CAediting_1204140	chr17_45142796_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3187-3p	45142793	45142798	6mer	45142780	45142799	141.00	-24.02
CAediting_1204140	chr17_45142796_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4701-5p	45142792	45142798	7mer-m8	45142778	45142799	142.00	-11.23
CAediting_1204140	chr17_45142796_+	ENSG00000181513.13	ENST00000376955	hsa-miR-588	45142792	45142798	7mer-m8	45142781	45142799	155.00	-20.89
CAediting_1204141	chr17_45142799_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3937	45142796	45142802	7mer-m8	45142781	45142803	141.00	-22.65
CAediting_1204144	chr17_45142827_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6879-3p	45142824	45142831	8mer-1a	45142809	45142831	151.00	-17.55
CAediting_1204147	chr17_45142843_+	ENSG00000181513.13	ENST00000376955	hsa-miR-92b-5p	45142840	45142847	8mer-1a	45142826	45142847	150.00	-24.27
CAediting_1204131	chr17_45142711_+	ENSG00000181513.13	ENST00000376955	hsa-miR-564	45142708	45142714	7mer-m8	45142697	45142715	150.00	-21.15
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548ae-3p	45142720	45142726	7mer-m8	45142707	45142727	141.00	-6.23
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548ae-3p	45142720	45142726	7mer-m8	45142707	45142727	141.00	-6.23
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548ah-3p	45142720	45142726	7mer-m8	45142705	45142727	143.00	-6.87
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548aj-3p	45142720	45142726	7mer-m8	45142707	45142727	141.00	-7.13
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548aj-3p	45142720	45142726	7mer-m8	45142707	45142727	141.00	-7.13
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548am-3p	45142720	45142726	7mer-m8	45142705	45142727	143.00	-6.23
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548aq-3p	45142720	45142726	7mer-m8	45142706	45142727	141.00	-6.30
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548j-3p	45142720	45142726	7mer-m8	45142707	45142727	141.00	-6.23
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548x-3p	45142720	45142726	7mer-m8	45142708	45142727	141.00	-7.13
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548x-3p	45142720	45142726	7mer-m8	45142708	45142727	141.00	-7.13
CAediting_1204133	chr17_45142722_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7844-5p	45142718	45142724	7mer-m8	45142704	45142725	160.00	-17.71
CAediting_1204139	chr17_45142788_+	ENSG00000181513.13	ENST00000376955	hsa-miR-665	45142781	45142787	7mer-m8	45142769	45142788	157.00	-22.68

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-214-5p	45142828	45142834	7mer-m8	45142813	45142835	143	-18.34
CAediting_1204146	chr17_45142832_+	ENSG00000181513.13	ENST00000376955	hsa-miR-214-5p	45142828	45142834	7mer-m8	45142813	45142835	143	-18.34
CAediting_1204145	chr17_45142830_+	ENSG00000181513.13	ENST00000376955	hsa-miR-215-3p	45142826	45142832	7mer-m8	45142811	45142833	147	-16.4
CAediting_1204146	chr17_45142832_+	ENSG00000181513.13	ENST00000376955	hsa-miR-215-3p	45142826	45142832	7mer-m8	45142811	45142833	147	-16.4
CAediting_1204124	chr17_45142660_+	ENSG00000181513.13	ENST00000376955	hsa-miR-219b-3p	45142657	45142663	7mer-m8	45142644	45142664	153	-15.53
CAediting_1204124	chr17_45142660_+	ENSG00000181513.13	ENST00000376955	hsa-miR-302f	45142656	45142662	7mer-m8	45142647	45142663	145	-8.09
CAediting_1204140	chr17_45142796_+	ENSG00000181513.13	ENST00000376955	hsa-miR-323a-5p	45142794	45142800	7mer-m8	45142776	45142801	153	-27.49
CAediting_1204141	chr17_45142799_+	ENSG00000181513.13	ENST00000376955	hsa-miR-323a-5p	45142794	45142800	7mer-m8	45142776	45142801	153	-27.49
CAediting_1204131	chr17_45142711_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3622b-5p	45142708	45142714	7mer-m8	45142697	45142715	143	-23.49
CAediting_1204141	chr17_45142799_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3665	45142797	45142803	7mer-m8	45142782	45142804	142	-23.23
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-377-5p	45142633	45142639	7mer-m8	45142618	45142640	155	-17.52
CAediting_1204125	chr17_45142673_+	ENSG00000181513.13	ENST00000376955	hsa-miR-3929	45142670	45142676	7mer-m8	45142654	45142677	151	-19.71
CAediting_1204131	chr17_45142711_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4253	45142709	45142715	7mer-m8	45142698	45142716	142	-20.57
CAediting_1204138	chr17_45142759_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4426	45142756	45142762	7mer-m8	45142747	45142763	143	-10.94
CAediting_1204125	chr17_45142673_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4478	45142670	45142676	7mer-m8	45142660	45142677	154	-24.76
CAediting_1204138	chr17_45142759_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4647	45142756	45142762	7mer-m8	45142741	45142763	154	-18.69
CAediting_1204125	chr17_45142673_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4649-3p	45142667	45142673	7mer-m8	45142654	45142674	140	-12.17
CAediting_1204138	chr17_45142759_+	ENSG00000181513.13	ENST00000376955	hsa-miR-4662b	45142756	45142762	7mer-m8	45142742	45142763	144	-10.75
CAediting_1204125	chr17_45142673_+	ENSG00000181513.13	ENST00000376955	hsa-miR-485-5p	45142671	45142677	7mer-m8	45142658	45142678	151	-18.72
CAediting_1204130	chr17_45142705_+	ENSG00000181513.13	ENST00000376955	hsa-miR-541-3p	45142700	45142707	8mer-1a	45142684	45142707	147	-22.35
CAediting_1204140	chr17_45142796_+	ENSG00000181513.13	ENST00000376955	hsa-miR-5587-5p	45142792	45142798	7mer-m8	45142782	45142799	140	-16.22
CAediting_1204141	chr17_45142799_+	ENSG00000181513.13	ENST00000376955	hsa-miR-5587-5p	45142792	45142798	7mer-m8	45142782	45142799	140	-16.22
CAediting_1204126	chr17_45142685_+	ENSG00000181513.13	ENST00000376955	hsa-miR-5690	45142682	45142688	7mer-m8	45142669	45142689	145	-16.75
CAediting_1204136	chr17_45142742_+	ENSG00000181513.13	ENST00000376955	hsa-miR-593-3p	45142741	45142746	6mer	45142729	45142747	140	-18.96
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6086	45142633	45142639	7mer-m8	45142621	45142640	150	-23.6
CAediting_1204121	chr17_45142636_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6516-5p	45142629	45142635	7mer-m8	45142615	45142636	145	-13.24
CAediting_1204130	chr17_45142705_+	ENSG00000181513.13	ENST00000376955	hsa-miR-654-5p	45142700	45142707	8mer-1a	45142687	45142707	144	-21.31
CAediting_1204129	chr17_45142697_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6720-3p	45142695	45142701	7mer-m8	45142681	45142702	148	-18.9
CAediting_1204147	chr17_45142843_+	ENSG00000181513.13	ENST00000376955	hsa-miR-6728-5p	45142841	45142847	7mer-m8	45142826	45142848	146	-18.1
CAediting_1204125	chr17_45142673_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7160-5p	45142668	45142674	7mer-m8	45142656	45142675	145	-18.66
CAediting_1204137	chr17_45142756_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7855-5p	45142753	45142758	6mer	45142739	45142759	140	-24.29
CAediting_1204138	chr17_45142759_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7855-5p	45142753	45142758	6mer	45142739	45142759	140	-24.29
CAediting_1204144	chr17_45142827_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7977	45142820	45142826	7mer-m8	45142810	45142827	140	-13.07
CAediting_1204127	chr17_45142692_+	ENSG00000181513.13	ENST00000376955	hsa-miR-7977	45142685	45142691	7mer-m8	45142675	45142692	142	-14.06
CAediting_1204142	chr17_45142817_+	ENSG00000181513.13	ENST00000376955	hsa-miR-887-5p	45142810	45142817	8mer-1a	45142796	45142817	148	-16.01

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000181513.13	ENST00000321854	hsa-miR-200b-3p	45143646	45143652	7mer-m8	45143631	45143653	147	-9.27
CAediting_393	chr1_1167164_+	ENSG00000181513.13	ENST00000398322	hsa-miR-200b-3p	45143646	45143652	7mer-m8	45143631	45143653	147	-9.27
CAediting_393	chr1_1167164_+	ENSG00000181513.13	ENST00000592162	hsa-miR-200b-3p	45143646	45143652	7mer-m8	45143631	45143653	147	-9.27
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000431281	hsa-miR-4512	45144036	45144042	7mer-m8	45144022	45144043	144	-29.85
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000591859	hsa-miR-4512	45144036	45144042	7mer-m8	45144022	45144043	144	-29.85
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000321854	hsa-miR-4512	45144036	45144042	7mer-m8	45144022	45144043	144	-29.85
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000398322	hsa-miR-4512	45144036	45144042	7mer-m8	45144022	45144043	144	-29.85
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000592162	hsa-miR-4512	45144036	45144042	7mer-m8	45144022	45144043	144	-29.85
CAediting_1229414	chr17_67471546_+	ENSG00000181513.13	ENST00000376955	hsa-miR-548aa	45142771	45142777	7mer-m8	45142754	45142778	140	-10.86
CAediting_1054808	chr15_66496985_-	ENSG00000181513.13	ENST00000589798	hsa-miR-4512	45137105	45137111	7mer-m8	45137091	45137112	154	-19.07
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000431281	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000591859	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000586346	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000321854	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000398322	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62
CAediting_468389	chr6_31355314_-	ENSG00000181513.13	ENST00000592162	hsa-miR-6891-5p	45143688	45143694	7mer-m8	45143679	45143695	146	-25.62

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000321854	hsa-miR-605-3p	45143678	45143684	7mer-m8	45143662	45143685	143	-11.76
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000321854	hsa-miR-605-3p	45143870	45143876	7mer-m8	45143854	45143877	146	-20.56
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000398322	hsa-miR-605-3p	45143678	45143684	7mer-m8	45143662	45143685	143	-11.76
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000398322	hsa-miR-605-3p	45143870	45143876	7mer-m8	45143854	45143877	146	-20.56
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000592162	hsa-miR-605-3p	45143870	45143876	7mer-m8	45143854	45143877	146	-20.56
CAediting_748296	chr10_51299626_+	ENSG00000181513.13	ENST00000592162	hsa-miR-605-3p	45143678	45143684	7mer-m8	45143662	45143685	143	-11.76

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ACBD4

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ACBD4

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_1204038	chr17_45140978_+	0.0408886292121553	0.241611086387975	.	.	.	.
KIRC	CAediting_1204038	chr17_45140978_+	.	.	0.0277250468818309	0.305337341185573	0.000196547393913032	0.494179892027793
STAD	CAediting_1204081	chr17_45142231_+	.	.	.	.	0.0113053210221851	0.301124492154623
ESCA	CAediting_1204082	chr17_45142232_+	.	.	.	.	0.00361085314118267	0.404088175560946
ESCA	CAediting_1204092	chr17_45142272_+	.	.	.	.	0.00097537500800152	0.452285162789631
KIRC	CAediting_1204113	chr17_45142587_+	0.0476893176760684	0.246582187083998	.	.	.	.
BLCA	CAediting_1204119	chr17_45142625_+	.	.	0.0147461297112088	0.286352192672889	.	.
LIHC	CAediting_1204119	chr17_45142625_+	0.000559272008181213	0.244291384381003	.	.	.	.
KIRC	CAediting_1204119	chr17_45142625_+	0.00337948626007238	0.164405893312504	.	.	.	.
KIRP	CAediting_1204119	chr17_45142625_+	0.0132014852976277	0.199969598489488	0.0213834065497313	0.185936079451718	.	.
LIHC	CAediting_1204128	chr17_45142695_+	.	.	0.0357435744876267	0.269436108939776	.	.
OV	CAediting_1204128	chr17_45142695_+	0.0083339370094541	0.176274209212043	.	.	.	.
BRCA	CAediting_1204142	chr17_45142817_+	0.000535152817667858	0.357819864445214	.	.	.	.
BLCA	CAediting_1204143	chr17_45142818_+	0.000146179346098118	0.35742360029222	.	.	.	.
BRCA	CAediting_1204143	chr17_45142818_+	0.000204612872203859	0.190126342072392	.	.	.	.
LIHC	CAediting_1204143	chr17_45142818_+	4.01556530760372e-05	0.256645801327869	.	.	.	.
CESC	CAediting_1204143	chr17_45142818_+	0.000792113357474474	0.405999388558837	.	.	.	.
LUAD	CAediting_1204143	chr17_45142818_+	0.000232243822427905	0.274092311882452	.	.	.	.
LUSC	CAediting_1204143	chr17_45142818_+	.	.	.	.	0.0402590174203308	0.282703181574577
PRAD	CAediting_1204143	chr17_45142818_+	0.045603457174663	0.181348362691891	.	.	.	.
STAD	CAediting_1204143	chr17_45142818_+	0.0293341409205306	0.180400980621803	.	.	.	.
THCA	CAediting_1204143	chr17_45142818_+	0.0053055798620447	0.159007521120871	.	.	.	.
KIRC	CAediting_1204143	chr17_45142818_+	0.0200313933974394	0.12237239855413	.	.	.	.
UCEC	CAediting_1204143	chr17_45142818_+	0.0147179196175251	0.247019286082957	.	.	.	.
OV	CAediting_1204143	chr17_45142818_+	2.51766446242357e-05	0.246360772344213	.	.	.	.
PCPG	CAediting_1204143	chr17_45142818_+	.	.	0.0182287901048229	0.272024071855866	.	.

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Relation with cancer stages for ACBD4

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
ESCA	pathologic_stage	CAediting_1204091	chr17_45142262_+	0.0265413338800594	0.334342325673017
ESCA	pathologic_stage	CAediting_1204092	chr17_45142272_+	0.0100037988953954	0.384325113767098
KIRC	pathologic_stage	CAediting_1204143	chr17_45142818_+	0.00118078093943108	0.170523699855594
LIHC	pathologic_stage	CAediting_1204119	chr17_45142625_+	0.0488974150716083	0.146209832643949
STAD	pathologic_stage	CAediting_1204081	chr17_45142231_+	0.0336807993755024	0.25796346751301
THCA	pathologic_stage	CAediting_1204128	chr17_45142695_+	0.0373085787053991	0.224952930999269

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Relation with survival for ACBD4

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ACBD4

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ACBD4

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
ACBD4	C0023893	Liver Cirrhosis, Experimental	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene