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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: CENPU (CAeditome ID:79682) |
Gene summary for CENPU |
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Gene information | Gene symbol | CENPU | Gene ID | 79682 |
Gene name | centromere protein U | |
Synonyms | CENP50|CENPU50|KLIP1|MLF1IP|PBIP1 | |
Cytomap | 4q35.1 | |
Type of gene | protein-coding | |
Description | centromere protein UKSHV latent nuclear antigen interacting protein 1MLF1 interacting proteincentromere protein of 50 kDainterphase centromere complex protein 24polo-box-interacting protein 1 | |
Modification date | 20210518 | |
UniProtAcc | Q71F23 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
CENPU | GO:0005654 | Centromere protein U | 0000052 |
CENPU | GO:0034451 | Centromere protein U | 0000052 |
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RNA A-to-I events for CENPU |
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CAediting_394577(184698479, -), CAediting_394578(184698480, -), CAediting_394579(184698485, -), CAediting_394580(184698497, -), CAediting_394581(184698516, -), CAediting_394582(184698527, -), CAediting_394583(184698547, -), CAediting_394584(184698574, -), CAediting_394585(184698579, -), CAediting_394586(184698583, -), CAediting_394587(184698589, -), CAediting_394588(184698595, -), CAediting_394589(184698626, -), CAediting_394590(184698643, -), CAediting_394591(184698653, -), CAediting_394592(184698654, -), CAediting_394593(184698677, -), CAediting_394594(184698705, -), CAediting_394595(184698716, -), CAediting_394596(184698722, -), CAediting_394597(184698730, -), CAediting_394598(184699071, -), CAediting_394599(184699083, -), CAediting_394600(184699138, -), CAediting_394601(184699163, -), CAediting_394602(184699169, -), CAediting_394603(184699208, -), CAediting_394604(184699218, -), CAediting_394605(184699220, -), CAediting_394606(184699267, -), CAediting_394607(184699283, -), CAediting_394608(184699328, -), CAediting_394609(184699696, -), CAediting_394610(184699733, -), CAediting_394611(184699757, -), CAediting_394612(184699766, -), CAediting_394613(184699793, -), CAediting_394614(184699798, -), CAediting_394615(184699799, -), CAediting_394616(184699856, -), CAediting_394617(184699875, -), CAediting_394618(184703005, -), CAediting_394619(184711991, -), |
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RNA editing positional annotations for CENPU using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_394577 | chr4_184698479_- | ncRNA_intronic |
CAediting_394578 | chr4_184698480_- | ncRNA_intronic |
CAediting_394579 | chr4_184698485_- | ncRNA_intronic |
CAediting_394580 | chr4_184698497_- | ncRNA_intronic |
CAediting_394581 | chr4_184698516_- | ncRNA_intronic |
CAediting_394582 | chr4_184698527_- | ncRNA_intronic |
CAediting_394583 | chr4_184698547_- | ncRNA_intronic |
CAediting_394584 | chr4_184698574_- | ncRNA_intronic |
CAediting_394585 | chr4_184698579_- | ncRNA_intronic |
CAediting_394586 | chr4_184698583_- | ncRNA_intronic |
CAediting_394587 | chr4_184698589_- | ncRNA_intronic |
CAediting_394588 | chr4_184698595_- | ncRNA_intronic |
CAediting_394589 | chr4_184698626_- | ncRNA_intronic |
CAediting_394590 | chr4_184698643_- | ncRNA_intronic |
CAediting_394591 | chr4_184698653_- | ncRNA_intronic |
CAediting_394592 | chr4_184698654_- | ncRNA_intronic |
CAediting_394593 | chr4_184698677_- | ncRNA_intronic |
CAediting_394594 | chr4_184698705_- | ncRNA_intronic |
CAediting_394595 | chr4_184698716_- | ncRNA_intronic |
CAediting_394596 | chr4_184698722_- | ncRNA_intronic |
CAediting_394597 | chr4_184698730_- | ncRNA_intronic |
CAediting_394598 | chr4_184699071_- | ncRNA_intronic |
CAediting_394599 | chr4_184699083_- | ncRNA_intronic |
CAediting_394600 | chr4_184699138_- | ncRNA_intronic |
CAediting_394601 | chr4_184699163_- | ncRNA_intronic |
CAediting_394602 | chr4_184699169_- | ncRNA_intronic |
CAediting_394603 | chr4_184699208_- | ncRNA_intronic |
CAediting_394604 | chr4_184699218_- | ncRNA_intronic |
CAediting_394605 | chr4_184699220_- | ncRNA_intronic |
CAediting_394606 | chr4_184699267_- | ncRNA_intronic |
CAediting_394607 | chr4_184699283_- | ncRNA_intronic |
CAediting_394608 | chr4_184699328_- | ncRNA_intronic |
CAediting_394609 | chr4_184699696_- | ncRNA_intronic |
CAediting_394610 | chr4_184699733_- | ncRNA_intronic |
CAediting_394611 | chr4_184699757_- | ncRNA_intronic |
CAediting_394612 | chr4_184699766_- | ncRNA_intronic |
CAediting_394613 | chr4_184699793_- | ncRNA_intronic |
CAediting_394614 | chr4_184699798_- | ncRNA_intronic |
CAediting_394615 | chr4_184699799_- | ncRNA_intronic |
CAediting_394616 | chr4_184699856_- | ncRNA_intronic |
CAediting_394617 | chr4_184699875_- | ncRNA_intronic |
CAediting_394618 | chr4_184703005_- | ncRNA_intronic |
CAediting_394619 | chr4_184711991_- | ncRNA_intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_394577 | chr4_184698479_- | SINE | Alu | AluSx1 |
CAediting_394578 | chr4_184698480_- | SINE | Alu | AluSx1 |
CAediting_394579 | chr4_184698485_- | SINE | Alu | AluSx1 |
CAediting_394580 | chr4_184698497_- | SINE | Alu | AluSx1 |
CAediting_394581 | chr4_184698516_- | SINE | Alu | AluSx1 |
CAediting_394582 | chr4_184698527_- | SINE | Alu | AluSx1 |
CAediting_394583 | chr4_184698547_- | SINE | Alu | AluSx1 |
CAediting_394584 | chr4_184698574_- | SINE | Alu | AluSx1 |
CAediting_394585 | chr4_184698579_- | SINE | Alu | AluSx1 |
CAediting_394586 | chr4_184698583_- | SINE | Alu | AluSx1 |
CAediting_394587 | chr4_184698589_- | SINE | Alu | AluSx1 |
CAediting_394588 | chr4_184698595_- | SINE | Alu | AluSx1 |
CAediting_394589 | chr4_184698626_- | SINE | Alu | AluSx1 |
CAediting_394590 | chr4_184698643_- | SINE | Alu | AluSx1 |
CAediting_394591 | chr4_184698653_- | SINE | Alu | AluSx1 |
CAediting_394592 | chr4_184698654_- | SINE | Alu | AluSx1 |
CAediting_394593 | chr4_184698677_- | SINE | Alu | AluSx1 |
CAediting_394594 | chr4_184698705_- | SINE | Alu | AluSx1 |
CAediting_394595 | chr4_184698716_- | SINE | Alu | AluSx1 |
CAediting_394596 | chr4_184698722_- | SINE | Alu | AluSx1 |
CAediting_394597 | chr4_184698730_- | SINE | Alu | AluSx1 |
CAediting_394598 | chr4_184699071_- | SINE | Alu | AluYk3 |
CAediting_394599 | chr4_184699083_- | SINE | Alu | AluYk3 |
CAediting_394600 | chr4_184699138_- | SINE | Alu | AluYk3 |
CAediting_394601 | chr4_184699163_- | SINE | Alu | AluYk3 |
CAediting_394602 | chr4_184699169_- | SINE | Alu | AluYk3 |
CAediting_394603 | chr4_184699208_- | SINE | Alu | AluYk3 |
CAediting_394604 | chr4_184699218_- | SINE | Alu | AluYk3 |
CAediting_394605 | chr4_184699220_- | SINE | Alu | AluYk3 |
CAediting_394606 | chr4_184699267_- | SINE | Alu | AluYk3 |
CAediting_394607 | chr4_184699283_- | SINE | Alu | AluYk3 |
CAediting_394608 | chr4_184699328_- | SINE | Alu | AluYk3 |
CAediting_394609 | chr4_184699696_- | SINE | Alu | AluSz |
CAediting_394610 | chr4_184699733_- | SINE | Alu | AluSz |
CAediting_394611 | chr4_184699757_- | SINE | Alu | AluSz |
CAediting_394612 | chr4_184699766_- | SINE | Alu | AluSz |
CAediting_394613 | chr4_184699793_- | SINE | Alu | AluSz |
CAediting_394614 | chr4_184699798_- | SINE | Alu | AluSz |
CAediting_394615 | chr4_184699799_- | SINE | Alu | AluSz |
CAediting_394616 | chr4_184699856_- | SINE | Alu | AluSz |
CAediting_394617 | chr4_184699875_- | SINE | Alu | AluSz |
CAediting_394618 | chr4_184703005_- | LINE | L1 | L1PA16 |
CAediting_394619 | chr4_184711991_- | SINE | Alu | AluSc |
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RNA A-to-I editing events in the alternative splicing sites for CENPU |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CENPU |
![]() * The grey color means N/A. |
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CESC.CAediting_394579.ENSG00000151725.CENPU.png ![]() |
CESC.CAediting_394614.ENSG00000151725.CENPU.png ![]() |
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Protein coding region RNA A-to-I editings for CENPU |
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The effects of the RNA editing to the miRNA binding sites for CENPU |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1368054 | chr19_46709310_- | ENSG00000151725.10 | ENST00000510146 | hsa-miR-320e | 184695377 | 184695383 | 7mer-m8 | 184695376 | 184695393 | 141 | -19.08 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for CENPU |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for CENPU |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
THCA | CAediting_394596 | chr4_184698722_- | 0.0348312129764017 | 0.133538942448263 | . | . | . | . |
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Relation with cancer stages for CENPU |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for CENPU |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for CENPU |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for CENPU |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
CENPU | C2239176 | Liver carcinoma | 1 | CTD_human |