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| Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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| The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: NEIL1 (CAeditome ID:79661) |
Gene summary for NEIL1 |
 Gene summary |
| Gene information | Gene symbol | NEIL1 | Gene ID | 79661 |
| Gene name | nei like DNA glycosylase 1 | |
| Synonyms | FPG1|NEI1|hFPG1 | |
| Cytomap | 15q24.2 | |
| Type of gene | protein-coding | |
| Description | endonuclease 8-like 1DNA endonuclease eight-like glycosylase 1DNA glycosylase/AP lyase Neil1DNA-(apurinic or apyrimidinic site) lyase Neil1NEH1endonuclease VIIIendonuclease VIII-like 1nei endonuclease VIII-like 1nei homolog 1nei-like protein 1 | |
| Modification date | 20210518 | |
| UniProtAcc | Q96FI4 | |
| Context |
| Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
| Gene | GO ID | GO term | PubMed ID |
| NEIL1 | GO:0016798 | Endonuclease 8-like 1 | 17611195 |
| NEIL1 | GO:0006284 | Endonuclease 8-like 1 | 17611195 |
| NEIL1 | GO:0006979 | Endonuclease 8-like 1 | 17611195 |
| NEIL1 | GO:0032074 | Endonuclease 8-like 1 | 17611195 |
| NEIL1 | GO:0005634 | Endonuclease 8-like 1 | 17611195 |
| NEIL1 | GO:0005654 | Endonuclease 8-like 1 | 0000052 |
| NEIL1 | GO:0005737 | Endonuclease 8-like 1 | 17611195 |
Top |
RNA A-to-I events for NEIL1 |
| RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
 |
| RNA editing frequencies across 33 cancers of gene: ENSG00000140398.12 |
 |
| RNA A-to-I editing events in Cancer. |
| CAediting_1061882(75349552, +), CAediting_1061883(75349560, +), CAediting_1061884(75349561, +), CAediting_1061885(75349566, +), CAediting_1061886(75349577, +), CAediting_1061887(75349578, +), CAediting_1061888(75349596, +), CAediting_1061889(75349604, +), CAediting_1061890(75349627, +), CAediting_1061891(75349649, +), CAediting_1061892(75349655, +), CAediting_1061893(75349658, +), CAediting_1061894(75349667, +), CAediting_1061895(75349693, +), CAediting_1061896(75349694, +), CAediting_1061897(75349720, +), CAediting_1061898(75349724, +), CAediting_1061899(75349734, +), CAediting_1061900(75349742, +), CAediting_1061901(75349755, +), CAediting_1061902(75349764, +), CAediting_1061903(75349768, +), CAediting_1061904(75349771, +), CAediting_1061905(75349784, +), CAediting_1061906(75349794, +), CAediting_1061907(75349796, +), CAediting_1061908(75349798, +), CAediting_1061909(75351295, +), CAediting_1061910(75351329, +), CAediting_1061911(75351331, +), CAediting_1061912(75351340, +), CAediting_1061913(75351343, +), CAediting_1061914(75351345, +), CAediting_1061915(75351350, +), CAediting_1061916(75351355, +), CAediting_1061917(75351362, +), CAediting_1061918(75351368, +), CAediting_1061919(75351388, +), CAediting_1061920(75351393, +), CAediting_1061921(75351394, +), CAediting_1061922(75351405, +), CAediting_1061923(75351415, +), CAediting_1061924(75351431, +), CAediting_1061925(75351443, +), CAediting_1061926(75351450, +), CAediting_1061927(75351461, +), CAediting_1061928(75351463, +), CAediting_1061929(75351523, +), CAediting_1061930(75351531, +), CAediting_1061931(75351534, +), CAediting_1061932(75351545, +), CAediting_1061933(75351647, +), CAediting_1061934(75351665, +), CAediting_1061935(75351678, +), CAediting_1061936(75351686, +), CAediting_1061937(75351691, +), CAediting_1061938(75351696, +), CAediting_1061939(75351708, +), CAediting_1061940(75351715, +), CAediting_1061941(75351722, +), CAediting_1061942(75351724, +), CAediting_1061943(75351739, +), CAediting_1061944(75351749, +), CAediting_1061945(75351752, +), CAediting_1061946(75351762, +), CAediting_1061947(75351764, +), CAediting_1061948(75351775, +), CAediting_1061949(75351788, +), CAediting_1061950(75351789, +), CAediting_1061951(75351795, +), CAediting_1061952(75351796, +), CAediting_1061953(75351805, +), CAediting_1061954(75351819, +), CAediting_1061955(75351831, +), CAediting_1061956(75351851, +), CAediting_1061957(75351883, +), CAediting_1061958(75351884, +), CAediting_1061959(75351891, +), CAediting_1061960(75352868, +), CAediting_1061961(75352876, +), CAediting_1061962(75352884, +), CAediting_1061963(75352885, +), CAediting_1061964(75352890, +), CAediting_1061965(75352907, +), CAediting_1061966(75352930, +), CAediting_1061967(75352933, +), CAediting_1061968(75352941, +), CAediting_1061969(75352953, +), CAediting_1061970(75352954, +), CAediting_1061971(75352963, +), CAediting_1061972(75352964, +), CAediting_1061973(75352969, +), CAediting_1061974(75352980, +), CAediting_1061975(75352994, +), CAediting_1061976(75353014, +), CAediting_1061977(75353020, +), CAediting_1061978(75353021, +), CAediting_1061979(75353026, +), CAediting_1061980(75353030, +), CAediting_1061981(75353043, +), CAediting_1061982(75353047, +), CAediting_1061983(75353051, +), CAediting_1061984(75353052, +), CAediting_1061985(75353060, +), CAediting_1061986(75353061, +), CAediting_1061987(75353062, +), CAediting_1061988(75353066, +), CAediting_1061989(75353082, +), CAediting_1061990(75353092, +), CAediting_1061991(75353094, +), CAediting_1061992(75353132, +), CAediting_1061993(75353274, +), CAediting_1061994(75353280, +), CAediting_1061995(75353291, +), CAediting_1061996(75353305, +), CAediting_1061997(75353311, +), CAediting_1061998(75353312, +), CAediting_1061999(75353322, +), CAediting_1062000(75353335, +), CAediting_1062001(75353347, +), CAediting_1062002(75353348, +), CAediting_1062003(75353351, +), CAediting_1062004(75353355, +), CAediting_1062005(75353358, +), CAediting_1062006(75353361, +), CAediting_1062007(75353363, +), CAediting_1062008(75353369, +), CAediting_1062009(75353371, +), CAediting_1062010(75353379, +), CAediting_1062011(75353388, +), CAediting_1062012(75353409, +), CAediting_1062013(75353411, +), CAediting_1062014(75353415, +), CAediting_1062015(75353435, +), CAediting_1062016(75353443, +), CAediting_1062017(75353448, +), CAediting_1062018(75353473, +), CAediting_1062019(75353478, +), CAediting_1062020(75353486, +), CAediting_1062021(75353487, +), CAediting_1062022(75353488, +), CAediting_1062023(75353500, +), CAediting_1062024(75353502, +), CAediting_1062025(75353517, +), CAediting_1062026(75353525, +), CAediting_1062027(75353744, +), CAediting_1062028(75353745, +), |
Top |
RNA editing positional annotations for NEIL1 using Annovar |
| Protein coding RNA editing(s). |
| CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
| Gene structure information of RNA editing(s). |
| CAeditome ID | Position | Variant type |
| CAediting_1061882 | chr15_75349552_+ | ncRNA_exonic |
| CAediting_1061883 | chr15_75349560_+ | ncRNA_exonic |
| CAediting_1061884 | chr15_75349561_+ | ncRNA_exonic |
| CAediting_1061885 | chr15_75349566_+ | ncRNA_exonic |
| CAediting_1061886 | chr15_75349577_+ | ncRNA_exonic |
| CAediting_1061887 | chr15_75349578_+ | ncRNA_exonic |
| CAediting_1061888 | chr15_75349596_+ | ncRNA_exonic |
| CAediting_1061889 | chr15_75349604_+ | ncRNA_exonic |
| CAediting_1061890 | chr15_75349627_+ | ncRNA_exonic |
| CAediting_1061891 | chr15_75349649_+ | ncRNA_exonic |
| CAediting_1061892 | chr15_75349655_+ | ncRNA_exonic |
| CAediting_1061893 | chr15_75349658_+ | ncRNA_exonic |
| CAediting_1061894 | chr15_75349667_+ | ncRNA_exonic |
| CAediting_1061895 | chr15_75349693_+ | ncRNA_intronic |
| CAediting_1061896 | chr15_75349694_+ | ncRNA_intronic |
| CAediting_1061897 | chr15_75349720_+ | ncRNA_intronic |
| CAediting_1061898 | chr15_75349724_+ | ncRNA_intronic |
| CAediting_1061899 | chr15_75349734_+ | ncRNA_intronic |
| CAediting_1061900 | chr15_75349742_+ | ncRNA_intronic |
| CAediting_1061901 | chr15_75349755_+ | ncRNA_intronic |
| CAediting_1061902 | chr15_75349764_+ | ncRNA_intronic |
| CAediting_1061903 | chr15_75349768_+ | ncRNA_intronic |
| CAediting_1061904 | chr15_75349771_+ | ncRNA_intronic |
| CAediting_1061905 | chr15_75349784_+ | ncRNA_intronic |
| CAediting_1061906 | chr15_75349794_+ | ncRNA_intronic |
| CAediting_1061907 | chr15_75349796_+ | ncRNA_intronic |
| CAediting_1061908 | chr15_75349798_+ | ncRNA_intronic |
| CAediting_1061909 | chr15_75351295_+ | ncRNA_intronic |
| CAediting_1061910 | chr15_75351329_+ | ncRNA_intronic |
| CAediting_1061911 | chr15_75351331_+ | ncRNA_intronic |
| CAediting_1061912 | chr15_75351340_+ | ncRNA_intronic |
| CAediting_1061913 | chr15_75351343_+ | ncRNA_intronic |
| CAediting_1061914 | chr15_75351345_+ | ncRNA_intronic |
| CAediting_1061915 | chr15_75351350_+ | ncRNA_intronic |
| CAediting_1061916 | chr15_75351355_+ | ncRNA_intronic |
| CAediting_1061917 | chr15_75351362_+ | ncRNA_intronic |
| CAediting_1061918 | chr15_75351368_+ | ncRNA_intronic |
| CAediting_1061919 | chr15_75351388_+ | ncRNA_intronic |
| CAediting_1061920 | chr15_75351393_+ | ncRNA_intronic |
| CAediting_1061921 | chr15_75351394_+ | ncRNA_intronic |
| CAediting_1061922 | chr15_75351405_+ | ncRNA_intronic |
| CAediting_1061923 | chr15_75351415_+ | ncRNA_intronic |
| CAediting_1061924 | chr15_75351431_+ | ncRNA_intronic |
| CAediting_1061925 | chr15_75351443_+ | ncRNA_intronic |
| CAediting_1061926 | chr15_75351450_+ | ncRNA_intronic |
| CAediting_1061927 | chr15_75351461_+ | ncRNA_intronic |
| CAediting_1061928 | chr15_75351463_+ | ncRNA_intronic |
| CAediting_1061929 | chr15_75351523_+ | ncRNA_intronic |
| CAediting_1061930 | chr15_75351531_+ | ncRNA_intronic |
| CAediting_1061931 | chr15_75351534_+ | ncRNA_intronic |
| CAediting_1061932 | chr15_75351545_+ | ncRNA_intronic |
| CAediting_1061933 | chr15_75351647_+ | ncRNA_intronic |
| CAediting_1061934 | chr15_75351665_+ | ncRNA_intronic |
| CAediting_1061935 | chr15_75351678_+ | ncRNA_intronic |
| CAediting_1061936 | chr15_75351686_+ | ncRNA_intronic |
| CAediting_1061937 | chr15_75351691_+ | ncRNA_intronic |
| CAediting_1061938 | chr15_75351696_+ | ncRNA_intronic |
| CAediting_1061939 | chr15_75351708_+ | ncRNA_intronic |
| CAediting_1061940 | chr15_75351715_+ | ncRNA_intronic |
| CAediting_1061941 | chr15_75351722_+ | ncRNA_intronic |
| CAediting_1061942 | chr15_75351724_+ | ncRNA_intronic |
| CAediting_1061943 | chr15_75351739_+ | ncRNA_intronic |
| CAediting_1061944 | chr15_75351749_+ | ncRNA_intronic |
| CAediting_1061945 | chr15_75351752_+ | ncRNA_intronic |
| CAediting_1061946 | chr15_75351762_+ | ncRNA_intronic |
| CAediting_1061947 | chr15_75351764_+ | ncRNA_intronic |
| CAediting_1061948 | chr15_75351775_+ | ncRNA_intronic |
| CAediting_1061949 | chr15_75351788_+ | ncRNA_intronic |
| CAediting_1061950 | chr15_75351789_+ | ncRNA_intronic |
| CAediting_1061951 | chr15_75351795_+ | ncRNA_intronic |
| CAediting_1061952 | chr15_75351796_+ | ncRNA_intronic |
| CAediting_1061953 | chr15_75351805_+ | ncRNA_intronic |
| CAediting_1061954 | chr15_75351819_+ | ncRNA_intronic |
| CAediting_1061955 | chr15_75351831_+ | ncRNA_intronic |
| CAediting_1061956 | chr15_75351851_+ | ncRNA_intronic |
| CAediting_1061957 | chr15_75351883_+ | ncRNA_intronic |
| CAediting_1061958 | chr15_75351884_+ | ncRNA_intronic |
| CAediting_1061959 | chr15_75351891_+ | ncRNA_intronic |
| CAediting_1061960 | chr15_75352868_+ | ncRNA_exonic |
| CAediting_1061961 | chr15_75352876_+ | ncRNA_exonic |
| CAediting_1061962 | chr15_75352884_+ | ncRNA_exonic |
| CAediting_1061963 | chr15_75352885_+ | ncRNA_exonic |
| CAediting_1061964 | chr15_75352890_+ | ncRNA_exonic |
| CAediting_1061965 | chr15_75352907_+ | ncRNA_exonic |
| CAediting_1061966 | chr15_75352930_+ | ncRNA_exonic |
| CAediting_1061967 | chr15_75352933_+ | ncRNA_exonic |
| CAediting_1061968 | chr15_75352941_+ | ncRNA_exonic |
| CAediting_1061969 | chr15_75352953_+ | ncRNA_exonic |
| CAediting_1061970 | chr15_75352954_+ | ncRNA_exonic |
| CAediting_1061971 | chr15_75352963_+ | ncRNA_exonic |
| CAediting_1061972 | chr15_75352964_+ | ncRNA_exonic |
| CAediting_1061973 | chr15_75352969_+ | ncRNA_exonic |
| CAediting_1061974 | chr15_75352980_+ | ncRNA_exonic |
| CAediting_1061975 | chr15_75352994_+ | ncRNA_exonic |
| CAediting_1061976 | chr15_75353014_+ | ncRNA_exonic |
| CAediting_1061977 | chr15_75353020_+ | ncRNA_exonic |
| CAediting_1061978 | chr15_75353021_+ | ncRNA_exonic |
| CAediting_1061979 | chr15_75353026_+ | ncRNA_exonic |
| CAediting_1061980 | chr15_75353030_+ | ncRNA_exonic |
| CAediting_1061981 | chr15_75353043_+ | ncRNA_exonic |
| CAediting_1061982 | chr15_75353047_+ | ncRNA_exonic |
| CAediting_1061983 | chr15_75353051_+ | ncRNA_exonic |
| CAediting_1061984 | chr15_75353052_+ | ncRNA_exonic |
| CAediting_1061985 | chr15_75353060_+ | ncRNA_exonic |
| CAediting_1061986 | chr15_75353061_+ | ncRNA_exonic |
| CAediting_1061987 | chr15_75353062_+ | ncRNA_exonic |
| CAediting_1061988 | chr15_75353066_+ | ncRNA_exonic |
| CAediting_1061989 | chr15_75353082_+ | ncRNA_exonic |
| CAediting_1061990 | chr15_75353092_+ | ncRNA_exonic |
| CAediting_1061991 | chr15_75353094_+ | ncRNA_exonic |
| CAediting_1061992 | chr15_75353132_+ | ncRNA_exonic |
| CAediting_1061993 | chr15_75353274_+ | ncRNA_exonic |
| CAediting_1061994 | chr15_75353280_+ | ncRNA_exonic |
| CAediting_1061995 | chr15_75353291_+ | ncRNA_exonic |
| CAediting_1061996 | chr15_75353305_+ | ncRNA_exonic |
| CAediting_1061997 | chr15_75353311_+ | ncRNA_exonic |
| CAediting_1061998 | chr15_75353312_+ | ncRNA_exonic |
| CAediting_1061999 | chr15_75353322_+ | ncRNA_exonic |
| CAediting_1062000 | chr15_75353335_+ | ncRNA_exonic |
| CAediting_1062001 | chr15_75353347_+ | ncRNA_exonic |
| CAediting_1062002 | chr15_75353348_+ | ncRNA_exonic |
| CAediting_1062003 | chr15_75353351_+ | ncRNA_exonic |
| CAediting_1062004 | chr15_75353355_+ | ncRNA_exonic |
| CAediting_1062005 | chr15_75353358_+ | ncRNA_exonic |
| CAediting_1062006 | chr15_75353361_+ | ncRNA_exonic |
| CAediting_1062007 | chr15_75353363_+ | ncRNA_exonic |
| CAediting_1062008 | chr15_75353369_+ | ncRNA_exonic |
| CAediting_1062009 | chr15_75353371_+ | ncRNA_exonic |
| CAediting_1062010 | chr15_75353379_+ | ncRNA_exonic |
| CAediting_1062011 | chr15_75353388_+ | ncRNA_exonic |
| CAediting_1062012 | chr15_75353409_+ | ncRNA_exonic |
| CAediting_1062013 | chr15_75353411_+ | ncRNA_exonic |
| CAediting_1062014 | chr15_75353415_+ | ncRNA_exonic |
| CAediting_1062015 | chr15_75353435_+ | ncRNA_exonic |
| CAediting_1062016 | chr15_75353443_+ | ncRNA_exonic |
| CAediting_1062017 | chr15_75353448_+ | ncRNA_exonic |
| CAediting_1062018 | chr15_75353473_+ | ncRNA_exonic |
| CAediting_1062019 | chr15_75353478_+ | ncRNA_exonic |
| CAediting_1062020 | chr15_75353486_+ | ncRNA_exonic |
| CAediting_1062021 | chr15_75353487_+ | ncRNA_exonic |
| CAediting_1062022 | chr15_75353488_+ | ncRNA_exonic |
| CAediting_1062023 | chr15_75353500_+ | ncRNA_exonic |
| CAediting_1062024 | chr15_75353502_+ | ncRNA_exonic |
| CAediting_1062025 | chr15_75353517_+ | ncRNA_exonic |
| CAediting_1062026 | chr15_75353525_+ | ncRNA_exonic |
| CAediting_1062027 | chr15_75353744_+ | exonic |
| CAediting_1062028 | chr15_75353745_+ | exonic |
| Repat-regional RNA editing(s). |
| CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
| CAediting_1061882 | chr15_75349552_+ | SINE | Alu | AluSg |
| CAediting_1061883 | chr15_75349560_+ | SINE | Alu | AluSg |
| CAediting_1061884 | chr15_75349561_+ | SINE | Alu | AluSg |
| CAediting_1061885 | chr15_75349566_+ | SINE | Alu | AluSg |
| CAediting_1061886 | chr15_75349577_+ | SINE | Alu | AluSg |
| CAediting_1061887 | chr15_75349578_+ | SINE | Alu | AluSg |
| CAediting_1061888 | chr15_75349596_+ | SINE | Alu | AluSg |
| CAediting_1061889 | chr15_75349604_+ | SINE | Alu | AluSg |
| CAediting_1061890 | chr15_75349627_+ | SINE | Alu | AluSg |
| CAediting_1061891 | chr15_75349649_+ | SINE | Alu | AluSg |
| CAediting_1061892 | chr15_75349655_+ | SINE | Alu | AluSg |
| CAediting_1061893 | chr15_75349658_+ | SINE | Alu | AluSg |
| CAediting_1061894 | chr15_75349667_+ | SINE | Alu | AluSg |
| CAediting_1061895 | chr15_75349693_+ | SINE | Alu | AluSg |
| CAediting_1061896 | chr15_75349694_+ | SINE | Alu | AluSg |
| CAediting_1061897 | chr15_75349720_+ | SINE | Alu | AluSg |
| CAediting_1061898 | chr15_75349724_+ | SINE | Alu | AluSg |
| CAediting_1061899 | chr15_75349734_+ | SINE | Alu | AluSg |
| CAediting_1061900 | chr15_75349742_+ | SINE | Alu | AluSg |
| CAediting_1061901 | chr15_75349755_+ | SINE | Alu | AluSg |
| CAediting_1061902 | chr15_75349764_+ | SINE | Alu | AluSg |
| CAediting_1061903 | chr15_75349768_+ | SINE | Alu | AluSg |
| CAediting_1061904 | chr15_75349771_+ | SINE | Alu | AluSg |
| CAediting_1061905 | chr15_75349784_+ | SINE | Alu | AluSg |
| CAediting_1061906 | chr15_75349794_+ | SINE | Alu | AluSg |
| CAediting_1061907 | chr15_75349796_+ | SINE | Alu | AluSg |
| CAediting_1061908 | chr15_75349798_+ | SINE | Alu | AluSg |
| CAediting_1061909 | chr15_75351295_+ | SINE | Alu | AluJb |
| CAediting_1061910 | chr15_75351329_+ | SINE | Alu | AluJb |
| CAediting_1061911 | chr15_75351331_+ | SINE | Alu | AluJb |
| CAediting_1061912 | chr15_75351340_+ | SINE | Alu | AluJb |
| CAediting_1061913 | chr15_75351343_+ | SINE | Alu | AluJb |
| CAediting_1061914 | chr15_75351345_+ | SINE | Alu | AluJb |
| CAediting_1061915 | chr15_75351350_+ | SINE | Alu | AluJb |
| CAediting_1061916 | chr15_75351355_+ | SINE | Alu | AluJb |
| CAediting_1061917 | chr15_75351362_+ | SINE | Alu | AluJb |
| CAediting_1061918 | chr15_75351368_+ | SINE | Alu | AluJb |
| CAediting_1061919 | chr15_75351388_+ | SINE | Alu | AluJb |
| CAediting_1061920 | chr15_75351393_+ | SINE | Alu | AluJb |
| CAediting_1061921 | chr15_75351394_+ | SINE | Alu | AluJb |
| CAediting_1061922 | chr15_75351405_+ | SINE | Alu | AluJb |
| CAediting_1061923 | chr15_75351415_+ | SINE | Alu | AluJb |
| CAediting_1061924 | chr15_75351431_+ | SINE | Alu | AluJb |
| CAediting_1061925 | chr15_75351443_+ | SINE | Alu | AluJb |
| CAediting_1061926 | chr15_75351450_+ | SINE | Alu | AluJb |
| CAediting_1061927 | chr15_75351461_+ | SINE | Alu | AluJb |
| CAediting_1061928 | chr15_75351463_+ | SINE | Alu | AluJb |
| CAediting_1061929 | chr15_75351523_+ | SINE | Alu | AluJb |
| CAediting_1061930 | chr15_75351531_+ | SINE | Alu | AluJb |
| CAediting_1061931 | chr15_75351534_+ | SINE | Alu | AluJb |
| CAediting_1061932 | chr15_75351545_+ | SINE | Alu | AluJb |
| CAediting_1061933 | chr15_75351647_+ | SINE | Alu | AluSx1 |
| CAediting_1061934 | chr15_75351665_+ | SINE | Alu | AluSx1 |
| CAediting_1061935 | chr15_75351678_+ | SINE | Alu | AluSx1 |
| CAediting_1061936 | chr15_75351686_+ | SINE | Alu | AluSx1 |
| CAediting_1061937 | chr15_75351691_+ | SINE | Alu | AluSx1 |
| CAediting_1061938 | chr15_75351696_+ | SINE | Alu | AluSx1 |
| CAediting_1061939 | chr15_75351708_+ | SINE | Alu | AluSx1 |
| CAediting_1061940 | chr15_75351715_+ | SINE | Alu | AluSx1 |
| CAediting_1061941 | chr15_75351722_+ | SINE | Alu | AluSx1 |
| CAediting_1061942 | chr15_75351724_+ | SINE | Alu | AluSx1 |
| CAediting_1061943 | chr15_75351739_+ | SINE | Alu | AluSx1 |
| CAediting_1061944 | chr15_75351749_+ | SINE | Alu | AluSx1 |
| CAediting_1061945 | chr15_75351752_+ | SINE | Alu | AluSx1 |
| CAediting_1061946 | chr15_75351762_+ | SINE | Alu | AluSx1 |
| CAediting_1061947 | chr15_75351764_+ | SINE | Alu | AluSx1 |
| CAediting_1061948 | chr15_75351775_+ | SINE | Alu | AluSx1 |
| CAediting_1061949 | chr15_75351788_+ | SINE | Alu | AluSx1 |
| CAediting_1061950 | chr15_75351789_+ | SINE | Alu | AluSx1 |
| CAediting_1061951 | chr15_75351795_+ | SINE | Alu | AluSx1 |
| CAediting_1061952 | chr15_75351796_+ | SINE | Alu | AluSx1 |
| CAediting_1061953 | chr15_75351805_+ | SINE | Alu | AluSx1 |
| CAediting_1061954 | chr15_75351819_+ | SINE | Alu | AluSx1 |
| CAediting_1061955 | chr15_75351831_+ | SINE | Alu | AluSx1 |
| CAediting_1061956 | chr15_75351851_+ | SINE | Alu | AluSx1 |
| CAediting_1061957 | chr15_75351883_+ | SINE | Alu | AluSx1 |
| CAediting_1061958 | chr15_75351884_+ | SINE | Alu | AluSx1 |
| CAediting_1061959 | chr15_75351891_+ | SINE | Alu | AluSx1 |
| CAediting_1061960 | chr15_75352868_+ | SINE | Alu | AluSq2 |
| CAediting_1061961 | chr15_75352876_+ | SINE | Alu | AluSq2 |
| CAediting_1061962 | chr15_75352884_+ | SINE | Alu | AluSq2 |
| CAediting_1061963 | chr15_75352885_+ | SINE | Alu | AluSq2 |
| CAediting_1061964 | chr15_75352890_+ | SINE | Alu | AluSq2 |
| CAediting_1061965 | chr15_75352907_+ | SINE | Alu | AluSq2 |
| CAediting_1061966 | chr15_75352930_+ | SINE | Alu | AluSq2 |
| CAediting_1061967 | chr15_75352933_+ | SINE | Alu | AluSq2 |
| CAediting_1061968 | chr15_75352941_+ | SINE | Alu | AluSq2 |
| CAediting_1061969 | chr15_75352953_+ | SINE | Alu | AluSq2 |
| CAediting_1061970 | chr15_75352954_+ | SINE | Alu | AluSq2 |
| CAediting_1061971 | chr15_75352963_+ | SINE | Alu | AluSq2 |
| CAediting_1061972 | chr15_75352964_+ | SINE | Alu | AluSq2 |
| CAediting_1061973 | chr15_75352969_+ | SINE | Alu | AluSq2 |
| CAediting_1061974 | chr15_75352980_+ | SINE | Alu | AluSq2 |
| CAediting_1061975 | chr15_75352994_+ | SINE | Alu | AluSq2 |
| CAediting_1061976 | chr15_75353014_+ | SINE | Alu | AluSq2 |
| CAediting_1061977 | chr15_75353020_+ | SINE | Alu | AluSq2 |
| CAediting_1061978 | chr15_75353021_+ | SINE | Alu | AluSq2 |
| CAediting_1061979 | chr15_75353026_+ | SINE | Alu | AluSq2 |
| CAediting_1061980 | chr15_75353030_+ | SINE | Alu | AluSq2 |
| CAediting_1061981 | chr15_75353043_+ | SINE | Alu | AluSq2 |
| CAediting_1061982 | chr15_75353047_+ | SINE | Alu | AluSq2 |
| CAediting_1061983 | chr15_75353051_+ | SINE | Alu | AluSq2 |
| CAediting_1061984 | chr15_75353052_+ | SINE | Alu | AluSq2 |
| CAediting_1061985 | chr15_75353060_+ | SINE | Alu | AluSq2 |
| CAediting_1061986 | chr15_75353061_+ | SINE | Alu | AluSq2 |
| CAediting_1061987 | chr15_75353062_+ | SINE | Alu | AluSq2 |
| CAediting_1061988 | chr15_75353066_+ | SINE | Alu | AluSq2 |
| CAediting_1061989 | chr15_75353082_+ | SINE | Alu | AluSq2 |
| CAediting_1061990 | chr15_75353092_+ | SINE | Alu | AluSq2 |
| CAediting_1061991 | chr15_75353094_+ | SINE | Alu | AluSq2 |
| CAediting_1061992 | chr15_75353132_+ | SINE | Alu | AluSq2 |
| CAediting_1061993 | chr15_75353274_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061994 | chr15_75353280_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061995 | chr15_75353291_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061996 | chr15_75353305_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061997 | chr15_75353311_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061998 | chr15_75353312_+ | SINE | Alu | AluYh3a3 |
| CAediting_1061999 | chr15_75353322_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062000 | chr15_75353335_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062001 | chr15_75353347_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062002 | chr15_75353348_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062003 | chr15_75353351_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062004 | chr15_75353355_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062005 | chr15_75353358_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062006 | chr15_75353361_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062007 | chr15_75353363_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062008 | chr15_75353369_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062009 | chr15_75353371_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062010 | chr15_75353379_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062011 | chr15_75353388_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062012 | chr15_75353409_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062013 | chr15_75353411_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062014 | chr15_75353415_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062015 | chr15_75353435_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062016 | chr15_75353443_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062017 | chr15_75353448_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062018 | chr15_75353473_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062019 | chr15_75353478_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062020 | chr15_75353486_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062021 | chr15_75353487_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062022 | chr15_75353488_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062023 | chr15_75353500_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062024 | chr15_75353502_+ | SINE | Alu | AluYh3a3 |
| CAediting_1062025 | chr15_75353517_+ | SINE | Alu | AluYh3a3 |
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RNA A-to-I editing events in the alternative splicing sites for NEIL1 |
| RNA A-to-I editing(s) in the alternative splicing sites. |
| AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
| ES | CAediting_1061909 | chr15_75351295_+ | 75351280:75351302 | 3SS | 0+5i | TTTTTTTTTTTTTTGAGACAGGG | -13.2 | TTTTTTTTTTTTTTGGGACAGGG | -12.35 |
| IR | CAediting_1061909 | chr15_75351295_+ | 75351280:75351302 | 3SS | 0+5i | TTTTTTTTTTTTTTGAGACAGGG | -13.2 | TTTTTTTTTTTTTTGGGACAGGG | -12.35 |
| Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000140398.12.NEIL1. |
| Correlation between RNA A-to-I editing and PSI for ENSG00000140398.12.NEIL1. |
Top |
Differntial gene expression between RNA A-to-I edited versus non-edited samples for NEIL1 |
| Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
 | |
| Correlation between RNA A-to-I editing and gene expression. |
 | |
| - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
BLCA.CAediting_1062006.ENSG00000140398.NEIL1.png  |
BLCA.CAediting_1062028.ENSG00000140398.NEIL1.png  |
BRCA.CAediting_1061912.ENSG00000140398.NEIL1.png  |
BRCA.CAediting_1062004.ENSG00000140398.NEIL1.png  |
BRCA.CAediting_1062028.ENSG00000140398.NEIL1.png  |
CESC.CAediting_1062004.ENSG00000140398.NEIL1.png  |
CESC.CAediting_1062028.ENSG00000140398.NEIL1.png  |
ESCA.CAediting_1062004.ENSG00000140398.NEIL1.png  |
ESCA.CAediting_1062006.ENSG00000140398.NEIL1.png  |
KIRC.CAediting_1061994.ENSG00000140398.NEIL1.png  |
KIRC.CAediting_1062004.ENSG00000140398.NEIL1.png  |
KIRC.CAediting_1062006.ENSG00000140398.NEIL1.png  |
KIRP.CAediting_1062028.ENSG00000140398.NEIL1.png  |
LAML.CAediting_1062004.ENSG00000140398.NEIL1.png  |
LAML.CAediting_1062006.ENSG00000140398.NEIL1.png  |
LAML.CAediting_1062028.ENSG00000140398.NEIL1.png  |
LUSC.CAediting_1062004.ENSG00000140398.NEIL1.png  |
OV.CAediting_1062004.ENSG00000140398.NEIL1.png  |
PCPG.CAediting_1061962.ENSG00000140398.NEIL1.png  |
PCPG.CAediting_1062004.ENSG00000140398.NEIL1.png  |
PCPG.CAediting_1062006.ENSG00000140398.NEIL1.png  |
PRAD.CAediting_1061994.ENSG00000140398.NEIL1.png  |
READ.CAediting_1062028.ENSG00000140398.NEIL1.png  |
SKCM.CAediting_1062004.ENSG00000140398.NEIL1.png  |
SKCM.CAediting_1062006.ENSG00000140398.NEIL1.png  |
STAD.CAediting_1062004.ENSG00000140398.NEIL1.png  |
THYM.CAediting_1062004.ENSG00000140398.NEIL1.png  |
THYM.CAediting_1062006.ENSG00000140398.NEIL1.png  |
UCEC.CAediting_1061912.ENSG00000140398.NEIL1.png  |
UCEC.CAediting_1062004.ENSG00000140398.NEIL1.png  |
UCEC.CAediting_1062006.ENSG00000140398.NEIL1.png  |
UCEC.CAediting_1062028.ENSG00000140398.NEIL1.png  |
Top |
Protein coding region RNA A-to-I editings for NEIL1 |
| - Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
 |
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The effects of the RNA editing to the miRNA binding sites for NEIL1 |
| **If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
| RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1061915 | chr15_75351350_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-891a-5p | 75351347 | 75351354 | 8mer-1a | 75351328 | 75351354 | 154.00 | -28.23 |
| CAediting_1061917 | chr15_75351362_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-3975 | 75351359 | 75351365 | 7mer-m8 | 75351345 | 75351366 | 154.00 | -14.06 |
| CAediting_1061917 | chr15_75351362_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-485-5p | 75351360 | 75351365 | 6mer | 75351343 | 75351366 | 145.00 | -19.47 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-10396a-3p | 75351365 | 75351371 | 7mer-m8 | 75351352 | 75351372 | 141.00 | -22.17 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-10396b-3p | 75351365 | 75351371 | 7mer-m8 | 75351351 | 75351372 | 141.00 | -19.76 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-10398-3p | 75351363 | 75351369 | 7mer-m8 | 75351352 | 75351370 | 146.00 | -21.21 |
| RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_1061915 | chr15_75351350_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-106a-3p | 75351348 | 75351354 | 7mer-m8 | 75351336 | 75351355 | 142 | -14.63 |
| CAediting_1061916 | chr15_75351355_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-106a-3p | 75351348 | 75351354 | 7mer-m8 | 75351336 | 75351355 | 142 | -14.63 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4254 | 75351363 | 75351369 | 7mer-m8 | 75351348 | 75351370 | 142 | -13.62 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4308 | 75351364 | 75351370 | 7mer-m8 | 75351354 | 75351371 | 152 | -16.63 |
| CAediting_1061913 | chr15_75351343_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4679 | 75351339 | 75351345 | 7mer-m8 | 75351325 | 75351346 | 152 | -14.05 |
| CAediting_1061914 | chr15_75351345_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4679 | 75351339 | 75351345 | 7mer-m8 | 75351325 | 75351346 | 152 | -14.05 |
| CAediting_1061913 | chr15_75351343_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4679 | 75351339 | 75351345 | 7mer-m8 | 75351325 | 75351346 | 152 | -14.05 |
| CAediting_1061914 | chr15_75351345_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-4679 | 75351339 | 75351345 | 7mer-m8 | 75351325 | 75351346 | 152 | -14.05 |
| CAediting_1061915 | chr15_75351350_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-556-5p | 75351344 | 75351350 | 7mer-m8 | 75351330 | 75351351 | 140 | -14.31 |
| CAediting_1061917 | chr15_75351362_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-655-5p | 75351359 | 75351365 | 7mer-m8 | 75351345 | 75351366 | 151 | -13.14 |
| CAediting_1061918 | chr15_75351368_+ | ENSG00000140398.12 | ENST00000568519 | hsa-miR-6779-3p | 75351366 | 75351372 | 7mer-m8 | 75351353 | 75351373 | 140 | -12.5 |
| RNA A-to-I editing in lncRNA gained miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in lncRNA lost miRNA binding sites. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs lost binding to lncRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| CAediting_117844 | chr1_162342605_+ | ENSG00000140398.12 | ENST00000564784 | hsa-miR-556-3p | 75355111 | 75355117 | 7mer-m8 | 75355098 | 75355118 | 143 | -14.74 |
| CAediting_117844 | chr1_162342605_+ | ENSG00000140398.12 | ENST00000569035 | hsa-miR-556-3p | 75355111 | 75355117 | 7mer-m8 | 75355098 | 75355118 | 143 | -14.74 |
| RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
| CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
| Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for NEIL1 |
| - RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
| ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
| RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
| CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for NEIL1 |
| Correlation between ADAR gene expression and RNA editing frequency |
| Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
| BRCA | CAediting_1061903 | chr15_75349768_+ | 0.02835802457337 | 0.210057066843788 | . | . | . | . |
| BRCA | CAediting_1061912 | chr15_75351340_+ | 0.0171423457721286 | 0.13530514137791 | . | . | . | . |
| OV | CAediting_1061912 | chr15_75351340_+ | 0.0403776957326076 | 0.277326112835502 | . | . | . | . |
| BLCA | CAediting_1061962 | chr15_75352884_+ | 0.0017899710094439 | 0.310041665583228 | . | . | . | . |
| BRCA | CAediting_1061962 | chr15_75352884_+ | 2.60106757983077e-14 | 0.345104040247984 | . | . | . | . |
| CESC | CAediting_1061962 | chr15_75352884_+ | 0.0253510003917761 | 0.279416004510075 | . | . | . | . |
| LUAD | CAediting_1061962 | chr15_75352884_+ | 1.07707175352798e-05 | 0.303454811276215 | . | . | . | . |
| COAD | CAediting_1061962 | chr15_75352884_+ | 0.00535964346814222 | 0.327130705469676 | . | . | . | . |
| PRAD | CAediting_1061962 | chr15_75352884_+ | 0.00170690532942755 | 0.195888186671211 | . | . | . | . |
| THCA | CAediting_1061962 | chr15_75352884_+ | 0.00893753083923316 | 0.191729936658383 | . | . | . | . |
| KIRC | CAediting_1061962 | chr15_75352884_+ | 0.0398973145966729 | 0.173896784737772 | . | . | . | . |
| UCEC | CAediting_1061962 | chr15_75352884_+ | 1.1504167506022e-05 | 0.442048599673877 | . | . | . | . |
| THYM | CAediting_1061962 | chr15_75352884_+ | 0.000394107527128997 | 0.469196926354231 | . | . | 0.00272044684921625 | 0.403707764590037 |
| LGG | CAediting_1061963 | chr15_75352885_+ | . | . | 0.0155910382116916 | 0.189162242293603 | . | . |
| BRCA | CAediting_1061963 | chr15_75352885_+ | 0.000314012272894509 | 0.205646300884125 | . | . | . | . |
| PRAD | CAediting_1061963 | chr15_75352885_+ | 0.00109992665153417 | 0.286343124486203 | . | . | . | . |
| LGG | CAediting_1061964 | chr15_75352890_+ | . | . | 0.00365418348328611 | 0.260203090107808 | . | . |
| LUAD | CAediting_1061964 | chr15_75352890_+ | 0.00470422130180005 | 0.354459201713697 | . | . | . | . |
| BRCA | CAediting_1061978 | chr15_75353021_+ | 0.000190700124858125 | 0.260875570035574 | . | . | 0.008786522187171 | 0.184838985880551 |
| BLCA | CAediting_1061985 | chr15_75353060_+ | 0.00294341208719616 | 0.363191468154857 | . | . | . | . |
| LGG | CAediting_1061985 | chr15_75353060_+ | . | . | 4.97372262066895e-06 | 0.343051003088732 | . | . |
| BRCA | CAediting_1061985 | chr15_75353060_+ | 2.26878300872843e-05 | 0.240020038162804 | . | . | . | . |
| LUAD | CAediting_1061985 | chr15_75353060_+ | 0.0157674014260796 | 0.205189764674848 | . | . | . | . |
| PRAD | CAediting_1061985 | chr15_75353060_+ | 0.00982324452372243 | 0.201093730325528 | . | . | . | . |
| STAD | CAediting_1061985 | chr15_75353060_+ | . | . | 0.0422842286742448 | 0.258756195015392 | . | . |
| THCA | CAediting_1061985 | chr15_75353060_+ | 0.031257684762284 | 0.184120423358834 | . | . | . | . |
| UCEC | CAediting_1061985 | chr15_75353060_+ | 0.000282572526722049 | 0.42117169329346 | . | . | . | . |
| BRCA | CAediting_1061993 | chr15_75353274_+ | 7.73997735963769e-07 | 0.275023225677824 | . | . | . | . |
| LUAD | CAediting_1061993 | chr15_75353274_+ | 0.0077846778783874 | 0.234241004974177 | . | . | . | . |
| PRAD | CAediting_1061993 | chr15_75353274_+ | 0.0150133943724412 | 0.250191685716316 | . | . | . | . |
| THCA | CAediting_1061993 | chr15_75353274_+ | 0.000130497789270487 | 0.386391217898436 | . | . | . | . |
| LGG | CAediting_1061994 | chr15_75353280_+ | . | . | . | . | 0.00651714493148812 | 0.163398026999042 |
| BRCA | CAediting_1061994 | chr15_75353280_+ | 1.00110561446018e-09 | 0.259701442872447 | . | . | . | . |
| COAD | CAediting_1061994 | chr15_75353280_+ | 0.0354765868145438 | 0.208491363335557 | . | . | . | . |
| UCEC | CAediting_1061994 | chr15_75353280_+ | 0.00158193593067781 | 0.299088192777036 | . | . | . | . |
| OV | CAediting_1061994 | chr15_75353280_+ | 0.00958729257650148 | 0.202967470297473 | . | . | . | . |
| THYM | CAediting_1061994 | chr15_75353280_+ | 0.0162681138006427 | 0.267931422303958 | . | . | . | . |
| LGG | CAediting_1061999 | chr15_75353322_+ | 0.00930272402904092 | 0.219869794424791 | 0.000745178171531996 | 0.282736468494126 | . | . |
| BRCA | CAediting_1061999 | chr15_75353322_+ | 0.0123269371357047 | 0.185685899100469 | . | . | . | . |
| LGG | CAediting_1062002 | chr15_75353348_+ | . | . | 2.00509118644393e-07 | 0.625195202454345 | . | . |
| LGG | CAediting_1062003 | chr15_75353351_+ | . | . | 0.00358796683996028 | 0.267196352166157 | . | . |
| BRCA | CAediting_1062006 | chr15_75353361_+ | 0.000825490058243255 | 0.138962903192389 | . | . | . | . |
| UCEC | CAediting_1062006 | chr15_75353361_+ | 0.0288962193951327 | 0.201216341590503 | . | . | . | . |
| LGG | CAediting_1062012 | chr15_75353409_+ | . | . | 4.86964324685042e-06 | 0.547900979187278 | . | . |
| BLCA | CAediting_1062014 | chr15_75353415_+ | 0.00144952287379588 | 0.378717184277027 | . | . | . | . |
| LGG | CAediting_1062014 | chr15_75353415_+ | . | . | 0.0179441229420101 | 0.172469113792864 | . | . |
| BRCA | CAediting_1062014 | chr15_75353415_+ | 0.000173944366832859 | 0.20554010167648 | . | . | . | . |
| LUAD | CAediting_1062014 | chr15_75353415_+ | 0.00840640746997938 | 0.23112409115272 | . | . | . | . |
| GBM | CAediting_1062014 | chr15_75353415_+ | . | . | 0.00841322021325389 | 0.348850353083727 | . | . |
| THCA | CAediting_1062014 | chr15_75353415_+ | 0.00453851729345771 | 0.256342758701652 | . | . | . | . |
| LGG | CAediting_1062019 | chr15_75353478_+ | 0.0332581302311525 | 0.225935761708266 | 0.035338525228741 | 0.223402613437316 | . | . |
| LGG | CAediting_1062020 | chr15_75353486_+ | . | . | 3.03321490757229e-06 | 0.363819293874469 | . | . |
| LGG | CAediting_1062023 | chr15_75353500_+ | . | . | 4.27241921231555e-06 | 0.405755576409367 | . | . |
| LGG | CAediting_1062028 | chr15_75353745_+ | . | . | . | . | 0.00982433169332795 | 0.117746226993344 |
| BRCA | CAediting_1062028 | chr15_75353745_+ | 0.000124268500718128 | 0.125375043247203 | . | . | . | . |
| UCEC | CAediting_1062028 | chr15_75353745_+ | 0.00163740777249504 | 0.16123441679031 | . | . | . | . |
| TGCT | CAediting_1062028 | chr15_75353745_+ | . | . | 0.0289641773110737 | 0.198622203705915 | . | . |
| THYM | CAediting_1062028 | chr15_75353745_+ | . | . | 0.0170239471481222 | 0.226105339699638 | . | . |
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Relation with cancer stages for NEIL1 |
| Correlation between Cancer stages and RNA editing frequency |
| Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
| BLCA | pathologic_stage | CAediting_1061985 | chr15_75353060_+ | 0.0281633432471848 | 0.272371570577229 |
| BRCA | pathologic_stage | CAediting_1061929 | chr15_75351523_+ | 0.0207249198012775 | -0.214568869778202 |
| BRCA | pathologic_stage | CAediting_1061964 | chr15_75352890_+ | 0.0279287966116701 | -0.152818198349246 |
| CESC | clinical_stage | CAediting_1062006 | chr15_75353361_+ | 0.026990128680945 | -0.221199744104263 |
| COAD | pathologic_stage | CAediting_1061962 | chr15_75352884_+ | 0.0103505290641536 | 0.306779541201007 |
| ESCA | clinical_stage | CAediting_1061962 | chr15_75352884_+ | 0.0148613519209421 | -0.656191446639578 |
| KIRC | pathologic_stage | CAediting_1061985 | chr15_75353060_+ | 0.00103183574501833 | 0.328181262605742 |
| KIRC | pathologic_stage | CAediting_1062028 | chr15_75353745_+ | 0.00161496991200323 | -0.158355043570532 |
| KIRP | clinical_stage | CAediting_1062014 | chr15_75353415_+ | 0.00873667332828453 | 0.442751128710102 |
| KIRP | pathologic_stage | CAediting_1062014 | chr15_75353415_+ | 0.0160750461478227 | 0.353123784159315 |
| LIHC | pathologic_stage | CAediting_1062028 | chr15_75353745_+ | 0.00147531197088324 | -0.18947492782197 |
| LUSC | pathologic_stage | CAediting_1061994 | chr15_75353280_+ | 0.0461943571169555 | 0.187128426826368 |
| LUSC | pathologic_stage | CAediting_1062004 | chr15_75353355_+ | 0.0216395141862598 | -0.203666356408775 |
| PAAD | pathologic_stage | CAediting_1061994 | chr15_75353280_+ | 0.0392620658525897 | 0.224059646837585 |
| PAAD | pathologic_stage | CAediting_1062028 | chr15_75353745_+ | 0.0499396029515906 | 0.162010916948187 |
| THCA | pathologic_stage | CAediting_1061912 | chr15_75351340_+ | 0.0270518270933669 | 0.217868645528105 |
| THCA | pathologic_stage | CAediting_1061964 | chr15_75352890_+ | 0.00149614518292569 | 0.351397905707879 |
| THCA | pathologic_stage | CAediting_1061985 | chr15_75353060_+ | 0.00127035054325751 | 0.273569224269627 |
| THCA | pathologic_stage | CAediting_1062028 | chr15_75353745_+ | 0.00515150466371884 | 0.127627039008613 |
| UCEC | clinical_stage | CAediting_1062004 | chr15_75353355_+ | 0.0493869805563307 | -0.183703248451683 |
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Relation with survival for NEIL1 |
| Correlation between RNA editing and survival |
| Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
| CESC | CAediting_1061962 | chr15_75352884_+ | 0.00862662178439355 | 0.015791 | 0.000629399 |
| STAD | CAediting_1061978 | chr15_75353021_+ | 0.0449375336500886 | 0.0203556 | 0.0818689 |
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RelatedDrugs for NEIL1 |
| Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
| Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
| NEIL1 | Q96FI4 | DB01592 | Iron | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB14488 | Ferrous gluconate | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB14489 | Ferrous succinate | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB14490 | Ferrous ascorbate | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB14491 | Ferrous fumarate | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB14501 | Ferrous glycine sulfate | Endonuclease 8-like 1 | SmallMoleculeDrug | approved |
| NEIL1 | Q96FI4 | DB09130 | Copper | Endonuclease 8-like 1 | SmallMoleculeDrug | approved|investigational |
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RelatedDiseases for NEIL1 |
| Diseases associated with this gene. (DisGeNet 7.0) |
| Gene | Disease ID | Disease name | # pubmeds | Source |
| NEIL1 | C0015695 | Fatty Liver | 2 | CTD_human |
| NEIL1 | C0028754 | Obesity | 2 | CTD_human |
| NEIL1 | C0524620 | Metabolic Syndrome X | 2 | CTD_human |
| NEIL1 | C2711227 | Steatohepatitis | 2 | CTD_human |
| NEIL1 | C0020459 | Hyperinsulinism | 1 | CTD_human |
| NEIL1 | C0020473 | Hyperlipidemia | 1 | CTD_human |
| NEIL1 | C0021655 | Insulin Resistance | 1 | CTD_human |
| NEIL1 | C0242339 | Dyslipidemias | 1 | CTD_human |
| NEIL1 | C0271650 | Impaired glucose tolerance | 1 | CTD_human |
| NEIL1 | C0598784 | Dyslipoproteinemias | 1 | CTD_human |
| NEIL1 | C0920563 | Insulin Sensitivity | 1 | CTD_human |
| NEIL1 | C1257963 | Endogenous Hyperinsulinism | 1 | CTD_human |
| NEIL1 | C1257964 | Exogenous Hyperinsulinism | 1 | CTD_human |
| NEIL1 | C1257965 | Compensatory Hyperinsulinemia | 1 | CTD_human |
| NEIL1 | C1706412 | Lipidemias | 1 | CTD_human |
