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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: AKIRIN1 (CAeditome ID:79647)

Gene summary for AKIRIN1

check button Gene summary
Gene informationGene symbol

AKIRIN1

Gene ID

79647

Gene nameakirin 1
SynonymsC1orf108|STRF2
Cytomap

1p34.3

Type of geneprotein-coding
Descriptionakirin-1
Modification date20210518
UniProtAcc

Q9H9L7

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
AKIRIN1

GO:0005634

Akirin-1

18066067

AKIRIN1

GO:0005654

Akirin-1

0000052

AKIRIN1

GO:0031965

Akirin-1

0000052


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RNA A-to-I events for AKIRIN1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000174574.14
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_47979(38993285, +), CAediting_47980(38993293, +), CAediting_47981(38993294, +), CAediting_47982(38993299, +), CAediting_47983(38993302, +), CAediting_47984(38993343, +), CAediting_47985(38993353, +), CAediting_47986(38993409, +), CAediting_47987(38993411, +), CAediting_47988(38993440, +), CAediting_47989(38993442, +), CAediting_47990(38993470, +), CAediting_47991(38993504, +), CAediting_47992(38993510, +), CAediting_47993(38993516, +), CAediting_47994(38993520, +), CAediting_47995(38993528, +), CAediting_47996(38993537, +), CAediting_47997(38993543, +), CAediting_47998(38993551, +), CAediting_47999(38993552, +), CAediting_48000(38993559, +), CAediting_48001(38993563, +), CAediting_48002(38993565, +), CAediting_48003(38993572, +), CAediting_48004(38993576, +), CAediting_48005(38993583, +), CAediting_48006(38993586, +), CAediting_48007(38993588, +), CAediting_48008(38993622, +), CAediting_48009(38993627, +), CAediting_48010(38993677, +), CAediting_48011(38993710, +), CAediting_48012(38993757, +), CAediting_48013(38993758, +), CAediting_48014(38993777, +), CAediting_48015(38993799, +), CAediting_48016(38993816, +), CAediting_48017(38993869, +), CAediting_48018(38993881, +), CAediting_48019(38993894, +), CAediting_48020(38993906, +), CAediting_48021(38993919, +), CAediting_48022(38993923, +), CAediting_48023(38993950, +), CAediting_48024(38993959, +), CAediting_48025(38993976, +), CAediting_48026(38993991, +), CAediting_48027(38994014, +), CAediting_48028(38994015, +), CAediting_48029(38994053, +), CAediting_48030(38994061, +), CAediting_48031(38994531, +), CAediting_48032(38994537, +), CAediting_48033(38994549, +), CAediting_48034(38994556, +), CAediting_48035(38994570, +), CAediting_48036(38994580, +), CAediting_48037(38994586, +), CAediting_48038(38994605, +), CAediting_48039(38994606, +), CAediting_48040(38994632, +), CAediting_48041(38994645, +), CAediting_48042(38994748, +), CAediting_48043(38994751, +), CAediting_48044(38994776, +), CAediting_48045(38994783, +), CAediting_48046(38994790, +), CAediting_48047(38994829, +), CAediting_48048(38994879, +), CAediting_48049(38994892, +), CAediting_48050(38994910, +), CAediting_48051(38994942, +), CAediting_48052(38994952, +), CAediting_48053(38994964, +), CAediting_48054(38994966, +), CAediting_48055(38995016, +), CAediting_48056(38995051, +), CAediting_48057(38995052, +), CAediting_48058(38995053, +), CAediting_48059(38995060, +), CAediting_48060(38995065, +), CAediting_48061(38995070, +), CAediting_48062(38995769, +), CAediting_48063(38995777, +), CAediting_48064(38995818, +), CAediting_48065(38995832, +), CAediting_48066(38995846, +), CAediting_48067(38995847, +), CAediting_48068(38995868, +), CAediting_48069(38995875, +), CAediting_48070(38995877, +), CAediting_48071(38995880, +), CAediting_48072(38995881, +), CAediting_48073(38995882, +), CAediting_48074(38995883, +), CAediting_48075(38995884, +), CAediting_48076(38995887, +), CAediting_48077(38995913, +), CAediting_48078(38995914, +), CAediting_48079(38995920, +), CAediting_48080(38995923, +), CAediting_48081(38995954, +), CAediting_48082(38995962, +), CAediting_48083(38995968, +), CAediting_48084(38995980, +), CAediting_48085(38995984, +), CAediting_48086(38996022, +), CAediting_48087(38996035, +), CAediting_48088(38996114, +), CAediting_48089(38996126, +), CAediting_48090(38996138, +), CAediting_48091(38996145, +), CAediting_48092(38996159, +), CAediting_48093(38996181, +), CAediting_48094(38996194, +), CAediting_48095(38996198, +), CAediting_48096(38996212, +), CAediting_48097(38996221, +), CAediting_48098(38996224, +), CAediting_48099(38996278, +), CAediting_48100(38996329, +), CAediting_48101(38996337, +), CAediting_48102(38996346, +), CAediting_48103(38996347, +), CAediting_48104(38996348, +), CAediting_48105(38996360, +), CAediting_48106(38996466, +), CAediting_48107(38996477, +), CAediting_48108(38996585, +), CAediting_48109(38996591, +), CAediting_48110(38996593, +), CAediting_48111(38996604, +), CAediting_48112(38996610, +), CAediting_48113(38996616, +), CAediting_48114(38996629, +), CAediting_48115(38996630, +), CAediting_48116(38996659, +), CAediting_48117(38996669, +), CAediting_48118(38996671, +), CAediting_48119(38996697, +), CAediting_48120(38996711, +), CAediting_48121(38996716, +), CAediting_48122(38996736, +), CAediting_48123(38996741, +), CAediting_48124(38996745, +), CAediting_48125(38996760, +), CAediting_48126(38996781, +), CAediting_48127(38996791, +), CAediting_48128(38996803, +), CAediting_48129(38996811, +), CAediting_48130(38996812, +), CAediting_48131(38997549, +), CAediting_48132(38997593, +), CAediting_48133(39000528, +), CAediting_48134(39000584, +), CAediting_48135(39000818, +), CAediting_48136(39000881, +), CAediting_48137(39000907, +), CAediting_48138(39000908, +), CAediting_48139(39000909, +), CAediting_48140(39001309, +), CAediting_48141(39001449, +), CAediting_48142(39001838, +), CAediting_48143(39002459, +), CAediting_48144(39002476, +), CAediting_48145(39002481, +), CAediting_48146(39002609, +), CAediting_48147(39002636, +), CAediting_48148(39002639, +), CAediting_48149(39002679, +), CAediting_48150(39005034, +), CAediting_48151(39005050, +), CAediting_48152(39005135, +), CAediting_48153(39005144, +), CAediting_48154(39005145, +), CAediting_48155(39005187, +), CAediting_48156(39005188, +), CAediting_48157(39005193, +), CAediting_48158(39005214, +), CAediting_48159(39005223, +), CAediting_48160(39005228, +), CAediting_48161(39005229, +), CAediting_48162(39005249, +), CAediting_48163(39005263, +),

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RNA editing positional annotations for AKIRIN1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_47979chr1_38993285_+intronic
CAediting_47980chr1_38993293_+intronic
CAediting_47981chr1_38993294_+intronic
CAediting_47982chr1_38993299_+intronic
CAediting_47983chr1_38993302_+intronic
CAediting_47984chr1_38993343_+intronic
CAediting_47985chr1_38993353_+intronic
CAediting_47986chr1_38993409_+intronic
CAediting_47987chr1_38993411_+intronic
CAediting_47988chr1_38993440_+intronic
CAediting_47989chr1_38993442_+intronic
CAediting_47990chr1_38993470_+intronic
CAediting_47991chr1_38993504_+intronic
CAediting_47992chr1_38993510_+intronic
CAediting_47993chr1_38993516_+intronic
CAediting_47994chr1_38993520_+intronic
CAediting_47995chr1_38993528_+intronic
CAediting_47996chr1_38993537_+intronic
CAediting_47997chr1_38993543_+intronic
CAediting_47998chr1_38993551_+intronic
CAediting_47999chr1_38993552_+intronic
CAediting_48000chr1_38993559_+intronic
CAediting_48001chr1_38993563_+intronic
CAediting_48002chr1_38993565_+intronic
CAediting_48003chr1_38993572_+intronic
CAediting_48004chr1_38993576_+intronic
CAediting_48005chr1_38993583_+intronic
CAediting_48006chr1_38993586_+intronic
CAediting_48007chr1_38993588_+intronic
CAediting_48008chr1_38993622_+intronic
CAediting_48009chr1_38993627_+intronic
CAediting_48010chr1_38993677_+intronic
CAediting_48011chr1_38993710_+intronic
CAediting_48012chr1_38993757_+intronic
CAediting_48013chr1_38993758_+intronic
CAediting_48014chr1_38993777_+intronic
CAediting_48015chr1_38993799_+intronic
CAediting_48016chr1_38993816_+intronic
CAediting_48017chr1_38993869_+intronic
CAediting_48018chr1_38993881_+intronic
CAediting_48019chr1_38993894_+intronic
CAediting_48020chr1_38993906_+intronic
CAediting_48021chr1_38993919_+intronic
CAediting_48022chr1_38993923_+intronic
CAediting_48023chr1_38993950_+intronic
CAediting_48024chr1_38993959_+intronic
CAediting_48025chr1_38993976_+intronic
CAediting_48026chr1_38993991_+intronic
CAediting_48027chr1_38994014_+intronic
CAediting_48028chr1_38994015_+intronic
CAediting_48029chr1_38994053_+intronic
CAediting_48030chr1_38994061_+intronic
CAediting_48031chr1_38994531_+intronic
CAediting_48032chr1_38994537_+intronic
CAediting_48033chr1_38994549_+intronic
CAediting_48034chr1_38994556_+intronic
CAediting_48035chr1_38994570_+intronic
CAediting_48036chr1_38994580_+intronic
CAediting_48037chr1_38994586_+intronic
CAediting_48038chr1_38994605_+intronic
CAediting_48039chr1_38994606_+intronic
CAediting_48040chr1_38994632_+intronic
CAediting_48041chr1_38994645_+intronic
CAediting_48042chr1_38994748_+intronic
CAediting_48043chr1_38994751_+intronic
CAediting_48044chr1_38994776_+intronic
CAediting_48045chr1_38994783_+intronic
CAediting_48046chr1_38994790_+intronic
CAediting_48047chr1_38994829_+intronic
CAediting_48048chr1_38994879_+intronic
CAediting_48049chr1_38994892_+intronic
CAediting_48050chr1_38994910_+intronic
CAediting_48051chr1_38994942_+intronic
CAediting_48052chr1_38994952_+intronic
CAediting_48053chr1_38994964_+intronic
CAediting_48054chr1_38994966_+intronic
CAediting_48055chr1_38995016_+intronic
CAediting_48056chr1_38995051_+intronic
CAediting_48057chr1_38995052_+intronic
CAediting_48058chr1_38995053_+intronic
CAediting_48059chr1_38995060_+intronic
CAediting_48060chr1_38995065_+intronic
CAediting_48061chr1_38995070_+intronic
CAediting_48062chr1_38995769_+intronic
CAediting_48063chr1_38995777_+intronic
CAediting_48064chr1_38995818_+intronic
CAediting_48065chr1_38995832_+intronic
CAediting_48066chr1_38995846_+intronic
CAediting_48067chr1_38995847_+intronic
CAediting_48068chr1_38995868_+intronic
CAediting_48069chr1_38995875_+intronic
CAediting_48070chr1_38995877_+intronic
CAediting_48071chr1_38995880_+intronic
CAediting_48072chr1_38995881_+intronic
CAediting_48073chr1_38995882_+intronic
CAediting_48074chr1_38995883_+intronic
CAediting_48075chr1_38995884_+intronic
CAediting_48076chr1_38995887_+intronic
CAediting_48077chr1_38995913_+intronic
CAediting_48078chr1_38995914_+intronic
CAediting_48079chr1_38995920_+intronic
CAediting_48080chr1_38995923_+intronic
CAediting_48081chr1_38995954_+intronic
CAediting_48082chr1_38995962_+intronic
CAediting_48083chr1_38995968_+intronic
CAediting_48084chr1_38995980_+intronic
CAediting_48085chr1_38995984_+intronic
CAediting_48086chr1_38996022_+intronic
CAediting_48087chr1_38996035_+intronic
CAediting_48088chr1_38996114_+intronic
CAediting_48089chr1_38996126_+intronic
CAediting_48090chr1_38996138_+intronic
CAediting_48091chr1_38996145_+intronic
CAediting_48092chr1_38996159_+intronic
CAediting_48093chr1_38996181_+intronic
CAediting_48094chr1_38996194_+intronic
CAediting_48095chr1_38996198_+intronic
CAediting_48096chr1_38996212_+intronic
CAediting_48097chr1_38996221_+intronic
CAediting_48098chr1_38996224_+intronic
CAediting_48099chr1_38996278_+intronic
CAediting_48100chr1_38996329_+intronic
CAediting_48101chr1_38996337_+intronic
CAediting_48102chr1_38996346_+intronic
CAediting_48103chr1_38996347_+intronic
CAediting_48104chr1_38996348_+intronic
CAediting_48105chr1_38996360_+intronic
CAediting_48106chr1_38996466_+intronic
CAediting_48107chr1_38996477_+intronic
CAediting_48108chr1_38996585_+intronic
CAediting_48109chr1_38996591_+intronic
CAediting_48110chr1_38996593_+intronic
CAediting_48111chr1_38996604_+intronic
CAediting_48112chr1_38996610_+intronic
CAediting_48113chr1_38996616_+intronic
CAediting_48114chr1_38996629_+intronic
CAediting_48115chr1_38996630_+intronic
CAediting_48116chr1_38996659_+intronic
CAediting_48117chr1_38996669_+intronic
CAediting_48118chr1_38996671_+intronic
CAediting_48119chr1_38996697_+intronic
CAediting_48120chr1_38996711_+intronic
CAediting_48121chr1_38996716_+intronic
CAediting_48122chr1_38996736_+intronic
CAediting_48123chr1_38996741_+intronic
CAediting_48124chr1_38996745_+intronic
CAediting_48125chr1_38996760_+intronic
CAediting_48126chr1_38996781_+intronic
CAediting_48127chr1_38996791_+intronic
CAediting_48128chr1_38996803_+intronic
CAediting_48129chr1_38996811_+intronic
CAediting_48130chr1_38996812_+intronic
CAediting_48131chr1_38997549_+intronic
CAediting_48132chr1_38997593_+intronic
CAediting_48133chr1_39000528_+intronic
CAediting_48134chr1_39000584_+intronic
CAediting_48135chr1_39000818_+intronic
CAediting_48136chr1_39000881_+intronic
CAediting_48137chr1_39000907_+intronic
CAediting_48138chr1_39000908_+intronic
CAediting_48139chr1_39000909_+intronic
CAediting_48140chr1_39001309_+intronic
CAediting_48141chr1_39001449_+intronic
CAediting_48142chr1_39001838_+intronic
CAediting_48143chr1_39002459_+intronic
CAediting_48144chr1_39002476_+intronic
CAediting_48145chr1_39002481_+intronic
CAediting_48146chr1_39002609_+intronic
CAediting_48147chr1_39002636_+intronic
CAediting_48148chr1_39002639_+intronic
CAediting_48149chr1_39002679_+intronic
CAediting_48150chr1_39005034_+UTR3
CAediting_48151chr1_39005050_+UTR3
CAediting_48152chr1_39005135_+UTR3
CAediting_48153chr1_39005144_+UTR3
CAediting_48154chr1_39005145_+UTR3
CAediting_48155chr1_39005187_+UTR3
CAediting_48156chr1_39005188_+UTR3
CAediting_48157chr1_39005193_+UTR3
CAediting_48158chr1_39005214_+UTR3
CAediting_48159chr1_39005223_+UTR3
CAediting_48160chr1_39005228_+UTR3
CAediting_48161chr1_39005229_+UTR3
CAediting_48162chr1_39005249_+UTR3
CAediting_48163chr1_39005263_+UTR3

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_47979chr1_38993285_+SINEAluAluSc8
CAediting_47980chr1_38993293_+SINEAluAluSc8
CAediting_47981chr1_38993294_+SINEAluAluSc8
CAediting_47982chr1_38993299_+SINEAluAluSc8
CAediting_47983chr1_38993302_+SINEAluAluSc8
CAediting_47984chr1_38993343_+SINEAluAluSc8
CAediting_47985chr1_38993353_+SINEAluAluSc8
CAediting_47986chr1_38993409_+SINEAluAluSc8
CAediting_47987chr1_38993411_+SINEAluAluSc8
CAediting_47988chr1_38993440_+SINEAluAluSc8
CAediting_47989chr1_38993442_+SINEAluAluSc8
CAediting_47990chr1_38993470_+SINEAluAluSc8
CAediting_47991chr1_38993504_+SINEAluAluSc8
CAediting_47992chr1_38993510_+SINEAluAluSc8
CAediting_47993chr1_38993516_+SINEAluAluSc8
CAediting_47994chr1_38993520_+SINEAluAluSc8
CAediting_47995chr1_38993528_+SINEAluAluSc8
CAediting_47996chr1_38993537_+SINEAluAluSc8
CAediting_47997chr1_38993543_+SINEAluAluSc8
CAediting_47998chr1_38993551_+SINEAluAluSc8
CAediting_47999chr1_38993552_+SINEAluAluSc8
CAediting_48000chr1_38993559_+SINEAluAluSc8
CAediting_48001chr1_38993563_+SINEAluAluSc8
CAediting_48002chr1_38993565_+SINEAluAluSc8
CAediting_48003chr1_38993572_+SINEAluAluSc8
CAediting_48004chr1_38993576_+SINEAluAluSc8
CAediting_48005chr1_38993583_+SINEAluAluSc8
CAediting_48006chr1_38993586_+SINEAluAluSc8
CAediting_48007chr1_38993588_+SINEAluAluSc8
CAediting_48008chr1_38993622_+SINEAluAluSc8
CAediting_48009chr1_38993627_+SINEAluAluSc8
CAediting_48010chr1_38993677_+SINEAluAluJo
CAediting_48011chr1_38993710_+SINEAluAluJo
CAediting_48012chr1_38993757_+SINEAluAluJo
CAediting_48013chr1_38993758_+SINEAluAluJo
CAediting_48014chr1_38993777_+SINEAluAluJo
CAediting_48015chr1_38993799_+SINEAluAluSp
CAediting_48016chr1_38993816_+SINEAluAluSp
CAediting_48017chr1_38993869_+SINEAluAluSp
CAediting_48018chr1_38993881_+SINEAluAluSp
CAediting_48019chr1_38993894_+SINEAluAluSp
CAediting_48020chr1_38993906_+SINEAluAluSp
CAediting_48021chr1_38993919_+SINEAluAluSp
CAediting_48022chr1_38993923_+SINEAluAluSp
CAediting_48023chr1_38993950_+SINEAluAluSp
CAediting_48024chr1_38993959_+SINEAluAluSp
CAediting_48025chr1_38993976_+SINEAluAluSp
CAediting_48026chr1_38993991_+SINEAluAluSp
CAediting_48027chr1_38994014_+SINEAluAluSp
CAediting_48028chr1_38994015_+SINEAluAluSp
CAediting_48029chr1_38994053_+SINEAluAluSp
CAediting_48030chr1_38994061_+SINEAluAluSp
CAediting_48031chr1_38994531_+SINEAluAluSx
CAediting_48032chr1_38994537_+SINEAluAluSx
CAediting_48033chr1_38994549_+SINEAluAluSx
CAediting_48034chr1_38994556_+SINEAluAluSx
CAediting_48035chr1_38994570_+SINEAluAluSx
CAediting_48036chr1_38994580_+SINEAluAluSx
CAediting_48037chr1_38994586_+SINEAluAluSx
CAediting_48038chr1_38994605_+SINEAluAluSx
CAediting_48039chr1_38994606_+SINEAluAluSx
CAediting_48040chr1_38994632_+SINEAluAluSx
CAediting_48041chr1_38994645_+SINEAluAluSx
CAediting_48042chr1_38994748_+SINEAluAluSq
CAediting_48043chr1_38994751_+SINEAluAluSq
CAediting_48044chr1_38994776_+SINEAluAluSq
CAediting_48045chr1_38994783_+SINEAluAluSq
CAediting_48046chr1_38994790_+SINEAluAluSq
CAediting_48047chr1_38994829_+SINEAluAluSq
CAediting_48048chr1_38994879_+SINEAluAluSq
CAediting_48049chr1_38994892_+SINEAluAluSq
CAediting_48050chr1_38994910_+SINEAluAluSq
CAediting_48051chr1_38994942_+SINEAluAluSq
CAediting_48052chr1_38994952_+SINEAluAluSq
CAediting_48053chr1_38994964_+SINEAluAluSq
CAediting_48054chr1_38994966_+SINEAluAluSq
CAediting_48055chr1_38995016_+SINEAluAluSx
CAediting_48056chr1_38995051_+SINEAluAluSx
CAediting_48057chr1_38995052_+SINEAluAluSx
CAediting_48058chr1_38995053_+SINEAluAluSx
CAediting_48059chr1_38995060_+SINEAluAluSx
CAediting_48060chr1_38995065_+SINEAluAluSx
CAediting_48061chr1_38995070_+SINEAluAluSx
CAediting_48062chr1_38995769_+SINEAluAluSx1
CAediting_48063chr1_38995777_+SINEAluAluSx1
CAediting_48064chr1_38995818_+SINEAluAluSx1
CAediting_48065chr1_38995832_+SINEAluAluSx1
CAediting_48066chr1_38995846_+SINEAluAluSx1
CAediting_48067chr1_38995847_+SINEAluAluSx1
CAediting_48068chr1_38995868_+SINEAluAluSx1
CAediting_48069chr1_38995875_+SINEAluAluSx1
CAediting_48070chr1_38995877_+SINEAluAluSx1
CAediting_48071chr1_38995880_+SINEAluAluSx1
CAediting_48072chr1_38995881_+SINEAluAluSx1
CAediting_48073chr1_38995882_+SINEAluAluSx1
CAediting_48074chr1_38995883_+SINEAluAluSx1
CAediting_48075chr1_38995884_+SINEAluAluSx1
CAediting_48076chr1_38995887_+SINEAluAluSx1
CAediting_48077chr1_38995913_+SINEAluAluSx1
CAediting_48078chr1_38995914_+SINEAluAluSx1
CAediting_48079chr1_38995920_+SINEAluAluSx1
CAediting_48080chr1_38995923_+SINEAluAluSx1
CAediting_48081chr1_38995954_+SINEAluAluSx1
CAediting_48082chr1_38995962_+SINEAluAluSx1
CAediting_48083chr1_38995968_+SINEAluAluSx1
CAediting_48084chr1_38995980_+SINEAluAluSx1
CAediting_48085chr1_38995984_+SINEAluAluSx1
CAediting_48086chr1_38996022_+SINEAluAluSx1
CAediting_48087chr1_38996035_+SINEAluAluSx1
CAediting_48088chr1_38996114_+SINEAluAluSx
CAediting_48089chr1_38996126_+SINEAluAluSx
CAediting_48090chr1_38996138_+SINEAluAluSx
CAediting_48091chr1_38996145_+SINEAluAluSx
CAediting_48092chr1_38996159_+SINEAluAluSx
CAediting_48093chr1_38996181_+SINEAluAluSx
CAediting_48094chr1_38996194_+SINEAluAluSx
CAediting_48095chr1_38996198_+SINEAluAluSx
CAediting_48096chr1_38996212_+SINEAluAluSx
CAediting_48097chr1_38996221_+SINEAluAluSx
CAediting_48098chr1_38996224_+SINEAluAluSx
CAediting_48099chr1_38996278_+SINEAluAluSx
CAediting_48100chr1_38996329_+SINEAluAluSx
CAediting_48101chr1_38996337_+SINEAluAluSx
CAediting_48102chr1_38996346_+SINEAluAluSx
CAediting_48103chr1_38996347_+SINEAluAluSx
CAediting_48104chr1_38996348_+SINEAluAluSx
CAediting_48105chr1_38996360_+SINEAluAluSx
CAediting_48106chr1_38996466_+SINEAluFLAM_C
CAediting_48107chr1_38996477_+SINEAluFLAM_C
CAediting_48108chr1_38996585_+SINEAluAluSc8
CAediting_48109chr1_38996591_+SINEAluAluSc8
CAediting_48110chr1_38996593_+SINEAluAluSc8
CAediting_48111chr1_38996604_+SINEAluAluSc8
CAediting_48112chr1_38996610_+SINEAluAluSc8
CAediting_48113chr1_38996616_+SINEAluAluSc8
CAediting_48114chr1_38996629_+SINEAluAluSc8
CAediting_48115chr1_38996630_+SINEAluAluSc8
CAediting_48116chr1_38996659_+SINEAluAluSc8
CAediting_48117chr1_38996669_+SINEAluAluSc8
CAediting_48118chr1_38996671_+SINEAluAluSc8
CAediting_48119chr1_38996697_+SINEAluAluSc8
CAediting_48120chr1_38996711_+SINEAluAluSc8
CAediting_48121chr1_38996716_+SINEAluAluSc8
CAediting_48122chr1_38996736_+SINEAluAluSc8
CAediting_48123chr1_38996741_+SINEAluAluSc8
CAediting_48124chr1_38996745_+SINEAluAluSc8
CAediting_48125chr1_38996760_+SINEAluAluSc8
CAediting_48126chr1_38996781_+SINEAluAluSc8
CAediting_48127chr1_38996791_+SINEAluAluSc8
CAediting_48128chr1_38996803_+SINEAluAluSc8
CAediting_48129chr1_38996811_+SINEAluAluSc8
CAediting_48130chr1_38996812_+SINEAluAluSc8
CAediting_48131chr1_38997549_+SINEAluFLAM_C
CAediting_48132chr1_38997593_+SINEAluFLAM_C
CAediting_48133chr1_39000528_+SINEAluAluSp
CAediting_48134chr1_39000584_+SINEAluAluSp
CAediting_48135chr1_39000818_+SINEAluAluSp
CAediting_48136chr1_39000881_+SINEAluAluSp
CAediting_48137chr1_39000907_+SINEAluAluSp
CAediting_48138chr1_39000908_+SINEAluAluSp
CAediting_48139chr1_39000909_+SINEAluAluSp
CAediting_48140chr1_39001309_+SINEAluAluSp
CAediting_48141chr1_39001449_+SINEAluAluSp
CAediting_48143chr1_39002459_+SINEAluAluY
CAediting_48144chr1_39002476_+SINEAluAluY
CAediting_48145chr1_39002481_+SINEAluAluY
CAediting_48146chr1_39002609_+SINEAluAluY
CAediting_48147chr1_39002636_+SINEAluAluY
CAediting_48148chr1_39002639_+SINEAluAluY
CAediting_48149chr1_39002679_+SINEAluAluY
CAediting_48150chr1_39005034_+SINEAluAluSx1
CAediting_48151chr1_39005050_+SINEAluAluSx1
CAediting_48152chr1_39005135_+SINEAluAluSx1
CAediting_48153chr1_39005144_+SINEAluAluSx1
CAediting_48154chr1_39005145_+SINEAluAluSx1
CAediting_48155chr1_39005187_+SINEAluAluSx1
CAediting_48156chr1_39005188_+SINEAluAluSx1
CAediting_48157chr1_39005193_+SINEAluAluSx1
CAediting_48158chr1_39005214_+SINEAluAluSx1
CAediting_48159chr1_39005223_+SINEAluAluSx1
CAediting_48160chr1_39005228_+SINEAluAluSx1
CAediting_48161chr1_39005229_+SINEAluAluSx1
CAediting_48162chr1_39005249_+SINEAluAluSx1
CAediting_48163chr1_39005263_+SINEAluAluSx1

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RNA A-to-I editing events in the alternative splicing sites for AKIRIN1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000174574.14.AKIRIN1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000174574.14.AKIRIN1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for AKIRIN1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for AKIRIN1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for AKIRIN1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-513a-5p39005044390050507mer-m83900503439005051144.00-16.68
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-513a-5p39005044390050507mer-m83900503439005051144.00-16.68
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-63839005049390050557mer-1a3900503139005055157.00-32.92
CAediting_48152chr1_39005135_+ENSG00000174574.14ENST00000432648hsa-miR-483-5p39005131390051377mer-m83900511739005138140.00-14.01
CAediting_48153chr1_39005144_+ENSG00000174574.14ENST00000432648hsa-miR-222-5p39005138390051458mer-1a3900512539005145141.00-9.81
CAediting_48153chr1_39005144_+ENSG00000174574.14ENST00000432648hsa-miR-30a-3p39005140390051478mer-1a3900512339005147154.00-11.94
CAediting_48153chr1_39005144_+ENSG00000174574.14ENST00000432648hsa-miR-30d-3p39005140390051478mer-1a3900512539005147153.00-12.10
CAediting_48153chr1_39005144_+ENSG00000174574.14ENST00000432648hsa-miR-30e-3p39005140390051478mer-1a3900512339005147154.00-14.00
CAediting_48153chr1_39005144_+ENSG00000174574.14ENST00000432648hsa-miR-93639005137390051448mer-1a3900512239005144159.00-22.75
CAediting_48155chr1_39005187_+ENSG00000174574.14ENST00000432648hsa-miR-63839005186390051927mer-1a3900516839005192155.00-32.17
CAediting_48161chr1_39005229_+ENSG00000174574.14ENST00000432648hsa-miR-443739005225390052317mer-m83900521239005232146.00-17.42
CAediting_48161chr1_39005229_+ENSG00000174574.14ENST00000432648hsa-miR-5088-5p39005226390052327mer-m83900520939005233162.00-27.50
CAediting_48150chr1_39005034_+ENSG00000174574.14ENST00000432648hsa-miR-1292-3p39005027390050337mer-m83900501639005034148.00-25.65
CAediting_48154chr1_39005145_+ENSG00000174574.14ENST00000432648hsa-miR-32539005138390051458mer-1a3900512339005145145.00-11.15
CAediting_48156chr1_39005188_+ENSG00000174574.14ENST00000432648hsa-miR-805239005186390051927mer-1a3900517239005192145.00-22.86

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_48155chr1_39005187_+ENSG00000174574.14ENST00000432648hsa-miR-10399-5p39005182390051887mer-m83900517039005189153-14.79
CAediting_48156chr1_39005188_+ENSG00000174574.14ENST00000432648hsa-miR-10399-5p39005182390051887mer-m83900517039005189153-14.79
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-10399-5p39005045390050517mer-m83900503139005052144-10.39
CAediting_48157chr1_39005193_+ENSG00000174574.14ENST00000432648hsa-miR-1207-3p39005190390051967mer-m83900518039005197140-12.56
CAediting_48158chr1_39005214_+ENSG00000174574.14ENST00000432648hsa-miR-197639005211390052188mer-1a3900519839005218149-21.37
CAediting_48152chr1_39005135_+ENSG00000174574.14ENST00000432648hsa-miR-317039005128390051347mer-m83900511439005135140-13.8
CAediting_48162chr1_39005249_+ENSG00000174574.14ENST00000432648hsa-miR-4772-3p39005243390052497mer-m83900522839005250150-19.68
CAediting_48156chr1_39005188_+ENSG00000174574.14ENST00000432648hsa-miR-5089-5p39005186390051927mer-m83900517339005193149-14.08
CAediting_48157chr1_39005193_+ENSG00000174574.14ENST00000432648hsa-miR-5089-5p39005186390051927mer-m83900517339005193149-14.08
CAediting_48162chr1_39005249_+ENSG00000174574.14ENST00000432648hsa-miR-509-3-5p39005245390052506mer3900523039005251140-20.8
CAediting_48155chr1_39005187_+ENSG00000174574.14ENST00000432648hsa-miR-6504-3p39005182390051887mer-m83900516839005189148-14.15
CAediting_48156chr1_39005188_+ENSG00000174574.14ENST00000432648hsa-miR-6504-3p39005182390051887mer-m83900516839005189148-14.15
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-6504-3p39005045390050517mer-m83900503139005052152-15.11
CAediting_48157chr1_39005193_+ENSG00000174574.14ENST00000432648hsa-miR-6506-5p39005187390051937mer-m83900517239005194144-16.51
CAediting_48158chr1_39005214_+ENSG00000174574.14ENST00000432648hsa-miR-6747-3p39005209390052168mer-1a3900519439005216150-25.68
CAediting_48161chr1_39005229_+ENSG00000174574.14ENST00000432648hsa-miR-6823-5p39005227390052337mer-m83900521539005234152-19.41
CAediting_48152chr1_39005135_+ENSG00000174574.14ENST00000432648hsa-miR-6855-5p39005128390051347mer-m83900511139005135145-17.8
CAediting_48152chr1_39005135_+ENSG00000174574.14ENST00000432648hsa-miR-6890-5p39005129390051357mer-m83900511639005136140-13.41
CAediting_48151chr1_39005050_+ENSG00000174574.14ENST00000432648hsa-miR-7151-3p39005043390050508mer-1a3900502639005050145-21.31
CAediting_48159chr1_39005223_+ENSG00000174574.14ENST00000432648hsa-miR-806239005218390052247mer-m83900520539005225141-10.43

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000174574.14ENST00000432648hsa-miR-451239004952390049587mer-m83900493539004959143-30.79
CAediting_1160181chr17_7017644_-ENSG00000174574.14ENST00000432648hsa-miR-195-3p39005971390059777mer-m83900595639005978154-13.78
CAediting_396018chr5_1062918_-ENSG00000174574.14ENST00000432648hsa-miR-463539004087390040948mer-1a3900407539004094168-24.57
CAediting_396018chr5_1062918_-ENSG00000174574.14ENST00000446189hsa-miR-463539004087390040948mer-1a3900407539004094168-24.57
CAediting_396018chr5_1062918_-ENSG00000174574.14ENST00000372984hsa-miR-463539004087390040948mer-1a3900407539004094168-24.57
CAediting_396018chr5_1062918_-ENSG00000174574.14ENST00000531822hsa-miR-463539004087390040948mer-1a3900407539004094168-24.57

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1160181chr17_7017644_-ENSG00000174574.14ENST00000432648hsa-miR-195-3p39005592390055987mer-m83900557839005599149-12.18
CAediting_86358chr1_109598906_+ENSG00000174574.14ENST00000432648hsa-miR-197-5p39004880390048867mer-m83900486539004887140-11.67

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for AKIRIN1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.
ENST00000432648.6protein_codingSoverviewSoverview

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI
CAediting_48150ENST00000432648.6chr1_39005034_+-857.00-857.00-872.80
CAediting_48151ENST00000432648.6chr1_39005050_+-859.20-857.00-872.80
CAediting_48152ENST00000432648.6chr1_39005135_+-858.70-857.00-872.80
CAediting_48153ENST00000432648.6chr1_39005144_+-857.70-857.00-872.80
CAediting_48154ENST00000432648.6chr1_39005145_+-857.00-857.00-872.80
CAediting_48155ENST00000432648.6chr1_39005187_+-857.00-857.00-872.80
CAediting_48156ENST00000432648.6chr1_39005188_+-857.00-857.00-872.80
CAediting_48157ENST00000432648.6chr1_39005193_+-856.20-857.00-872.80
CAediting_48158ENST00000432648.6chr1_39005214_+-857.10-857.00-872.80
CAediting_48159ENST00000432648.6chr1_39005223_+-858.90-857.00-872.80
CAediting_48160ENST00000432648.6chr1_39005228_+-859.60-857.00-872.80
CAediting_48161ENST00000432648.6chr1_39005229_+-862.20-857.00-872.80
CAediting_48162ENST00000432648.6chr1_39005249_+-856.30-857.00-872.80
CAediting_48163ENST00000432648.6chr1_39005263_+-860.90-857.00-872.80

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Relation with ADAR for AKIRIN1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
ESCACAediting_48122chr1_38996736_+..0.04998071371442350.250055279314236..
ESCACAediting_48127chr1_38996791_+..0.03408218852263740.297356539322303..

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Relation with cancer stages for AKIRIN1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_48122chr1_38996736_+0.0242581414141086-0.5281477280392

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Relation with survival for AKIRIN1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for AKIRIN1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for AKIRIN1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource