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Editing gene: RNASEH2B (CAeditome ID:79621)

Gene summary for RNASEH2B

Gene summary

Gene information	Gene symbol	RNASEH2B
	Gene ID	79621
	Gene name	ribonuclease H2 subunit B
	Synonyms	AGS2\|DLEU8
	Cytomap	13q14.3
	Type of gene	protein-coding
	Description	ribonuclease H2 subunit BAicardi-Goutieres syndrome 2 proteinRNase H2 subunit Bdeleted in lymphocytic leukemia 8ribonuclease HI subunit B
	Modification date	20210518
	UniProtAcc	Q5TBB1
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
RNASEH2B	GO:0006401	Ribonuclease H2 subunit B	21177858
RNASEH2B	GO:0005654	Ribonuclease H2 subunit B	0000052
RNASEH2B	GO:0032299	Ribonuclease H2 subunit B	21177858

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RNA A-to-I events for RNASEH2B

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000136104.17

RNA A-to-I editing events in Cancer.

CAediting_965431(50937246, +), CAediting_965432(50937322, +), CAediting_965433(50937355, +), CAediting_965434(50937356, +), CAediting_965435(50937361, +), CAediting_965436(50937363, +), CAediting_965437(50937367, +), CAediting_965438(50937370, +), CAediting_965439(50937437, +), CAediting_965440(50937489, +), CAediting_965441(50938977, +), CAediting_965442(50938980, +), CAediting_965443(50939236, +), CAediting_965444(50939242, +), CAediting_965445(50939263, +), CAediting_965446(50939278, +), CAediting_965447(50939367, +), CAediting_965448(50939369, +), CAediting_965449(50939373, +), CAediting_965450(50939399, +), CAediting_965451(50939405, +), CAediting_965452(50939430, +), CAediting_965453(50939435, +), CAediting_965454(50939440, +), CAediting_965455(50939459, +), CAediting_965456(50939466, +), CAediting_965457(50939475, +), CAediting_965458(50939477, +), CAediting_965459(50939491, +), CAediting_965460(50952061, +), CAediting_965461(50952062, +), CAediting_965462(50952427, +), CAediting_965463(50952463, +), CAediting_965464(50952585, +), CAediting_965465(50952648, +), CAediting_965466(50952663, +), CAediting_965467(50964184, +), CAediting_965468(50968196, +), CAediting_965469(50968209, +), CAediting_965470(50968216, +), CAediting_965471(50968273, +), CAediting_965472(50968279, +), CAediting_965473(50968280, +), CAediting_965474(50968285, +), CAediting_965475(50968289, +), CAediting_965476(50971420, +), CAediting_965477(50971427, +), CAediting_965478(50971430, +), CAediting_965479(50971440, +), CAediting_965480(50971475, +), CAediting_965481(50971476, +), CAediting_965482(50971480, +), CAediting_965483(50971493, +), CAediting_965484(50971502, +), CAediting_965485(50971505, +), CAediting_965486(50971515, +), CAediting_965487(50971517, +), CAediting_965488(50971557, +), CAediting_965489(50971563, +), CAediting_965490(50971580, +), CAediting_965491(50971588, +), CAediting_965492(50971618, +), CAediting_965493(50971630, +), CAediting_965494(50971635, +), CAediting_965495(50971643, +), CAediting_965496(50971645, +), CAediting_965497(50971657, +), CAediting_965498(50972217, +), CAediting_965499(50972218, +), CAediting_965500(50972223, +), CAediting_965501(50972226, +), CAediting_965502(50972234, +), CAediting_965503(50972239, +), CAediting_965504(50972245, +), CAediting_965505(50972253, +), CAediting_965506(50972255, +), CAediting_965507(50972263, +), CAediting_965508(50972266, +), CAediting_965509(50972272, +), CAediting_965510(50972274, +), CAediting_965511(50972277, +), CAediting_965512(50972287, +), CAediting_965513(50972289, +), CAediting_965514(50972291, +), CAediting_965515(50972295, +), CAediting_965516(50972303, +), CAediting_965517(50972309, +), CAediting_965518(50972311, +), CAediting_965519(50972314, +), CAediting_965520(50972315, +), CAediting_965521(50972316, +), CAediting_965522(50972325, +), CAediting_965523(50972326, +), CAediting_965524(50972332, +), CAediting_965525(50972334, +), CAediting_965526(50972337, +), CAediting_965527(50972353, +), CAediting_965528(50972361, +), CAediting_965529(50972363, +), CAediting_965530(50972369, +), CAediting_965531(50972373, +), CAediting_965532(50972386, +), CAediting_965533(50972392, +), CAediting_965534(50972393, +), CAediting_965535(50972404, +), CAediting_965536(50972426, +), CAediting_965537(50972429, +), CAediting_965538(50972440, +), CAediting_965539(50972442, +), CAediting_965540(50972445, +), CAediting_965541(50972450, +), CAediting_965542(50972455, +), CAediting_965543(50972460, +), CAediting_965544(50972467, +), CAediting_965545(50972486, +), CAediting_965546(50972487, +), CAediting_965547(50972488, +), CAediting_965548(50972489, +), CAediting_965549(50972490, +), CAediting_965550(50972491, +), CAediting_965551(50972492, +), CAediting_965552(50972493, +), CAediting_965553(50972494, +), CAediting_965554(50972496, +),

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RNA editing positional annotations for RNASEH2B using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_965431	chr13_50937246_+	ncRNA_intronic
CAediting_965432	chr13_50937322_+	ncRNA_intronic
CAediting_965433	chr13_50937355_+	ncRNA_intronic
CAediting_965434	chr13_50937356_+	ncRNA_intronic
CAediting_965435	chr13_50937361_+	ncRNA_intronic
CAediting_965436	chr13_50937363_+	ncRNA_intronic
CAediting_965437	chr13_50937367_+	ncRNA_intronic
CAediting_965438	chr13_50937370_+	ncRNA_intronic
CAediting_965439	chr13_50937437_+	ncRNA_intronic
CAediting_965440	chr13_50937489_+	ncRNA_intronic
CAediting_965441	chr13_50938977_+	ncRNA_intronic
CAediting_965442	chr13_50938980_+	ncRNA_intronic
CAediting_965443	chr13_50939236_+	ncRNA_intronic
CAediting_965444	chr13_50939242_+	ncRNA_intronic
CAediting_965445	chr13_50939263_+	ncRNA_intronic
CAediting_965446	chr13_50939278_+	ncRNA_intronic
CAediting_965447	chr13_50939367_+	ncRNA_intronic
CAediting_965448	chr13_50939369_+	ncRNA_intronic
CAediting_965449	chr13_50939373_+	ncRNA_intronic
CAediting_965450	chr13_50939399_+	ncRNA_intronic
CAediting_965451	chr13_50939405_+	ncRNA_intronic
CAediting_965452	chr13_50939430_+	ncRNA_intronic
CAediting_965453	chr13_50939435_+	ncRNA_intronic
CAediting_965454	chr13_50939440_+	ncRNA_intronic
CAediting_965455	chr13_50939459_+	ncRNA_intronic
CAediting_965456	chr13_50939466_+	ncRNA_intronic
CAediting_965457	chr13_50939475_+	ncRNA_intronic
CAediting_965458	chr13_50939477_+	ncRNA_intronic
CAediting_965459	chr13_50939491_+	ncRNA_intronic
CAediting_965460	chr13_50952061_+	ncRNA_intronic
CAediting_965461	chr13_50952062_+	ncRNA_intronic
CAediting_965462	chr13_50952427_+	ncRNA_intronic
CAediting_965463	chr13_50952463_+	ncRNA_intronic
CAediting_965464	chr13_50952585_+	ncRNA_intronic
CAediting_965465	chr13_50952648_+	ncRNA_intronic
CAediting_965466	chr13_50952663_+	ncRNA_intronic
CAediting_965467	chr13_50964184_+	ncRNA_intronic
CAediting_965468	chr13_50968196_+	ncRNA_intronic
CAediting_965469	chr13_50968209_+	ncRNA_intronic
CAediting_965470	chr13_50968216_+	ncRNA_intronic
CAediting_965471	chr13_50968273_+	ncRNA_intronic
CAediting_965472	chr13_50968279_+	ncRNA_intronic
CAediting_965473	chr13_50968280_+	ncRNA_intronic
CAediting_965474	chr13_50968285_+	ncRNA_intronic
CAediting_965475	chr13_50968289_+	ncRNA_intronic
CAediting_965476	chr13_50971420_+	UTR3
CAediting_965477	chr13_50971427_+	UTR3
CAediting_965478	chr13_50971430_+	UTR3
CAediting_965479	chr13_50971440_+	UTR3
CAediting_965480	chr13_50971475_+	UTR3
CAediting_965481	chr13_50971476_+	UTR3
CAediting_965482	chr13_50971480_+	UTR3
CAediting_965483	chr13_50971493_+	UTR3
CAediting_965484	chr13_50971502_+	UTR3
CAediting_965485	chr13_50971505_+	UTR3
CAediting_965486	chr13_50971515_+	UTR3
CAediting_965487	chr13_50971517_+	UTR3
CAediting_965488	chr13_50971557_+	UTR3
CAediting_965489	chr13_50971563_+	UTR3
CAediting_965490	chr13_50971580_+	UTR3
CAediting_965491	chr13_50971588_+	UTR3
CAediting_965492	chr13_50971618_+	UTR3
CAediting_965493	chr13_50971630_+	UTR3
CAediting_965494	chr13_50971635_+	UTR3
CAediting_965495	chr13_50971643_+	UTR3
CAediting_965496	chr13_50971645_+	UTR3
CAediting_965497	chr13_50971657_+	UTR3
CAediting_965498	chr13_50972217_+	UTR3
CAediting_965499	chr13_50972218_+	UTR3
CAediting_965500	chr13_50972223_+	UTR3
CAediting_965501	chr13_50972226_+	UTR3
CAediting_965502	chr13_50972234_+	UTR3
CAediting_965503	chr13_50972239_+	UTR3
CAediting_965504	chr13_50972245_+	UTR3
CAediting_965505	chr13_50972253_+	UTR3
CAediting_965506	chr13_50972255_+	UTR3
CAediting_965507	chr13_50972263_+	UTR3
CAediting_965508	chr13_50972266_+	UTR3
CAediting_965509	chr13_50972272_+	UTR3
CAediting_965510	chr13_50972274_+	UTR3
CAediting_965511	chr13_50972277_+	UTR3
CAediting_965512	chr13_50972287_+	UTR3
CAediting_965513	chr13_50972289_+	UTR3
CAediting_965514	chr13_50972291_+	UTR3
CAediting_965515	chr13_50972295_+	UTR3
CAediting_965516	chr13_50972303_+	UTR3
CAediting_965517	chr13_50972309_+	UTR3
CAediting_965518	chr13_50972311_+	UTR3
CAediting_965519	chr13_50972314_+	UTR3
CAediting_965520	chr13_50972315_+	UTR3
CAediting_965521	chr13_50972316_+	UTR3
CAediting_965522	chr13_50972325_+	UTR3
CAediting_965523	chr13_50972326_+	UTR3
CAediting_965524	chr13_50972332_+	UTR3
CAediting_965525	chr13_50972334_+	UTR3
CAediting_965526	chr13_50972337_+	UTR3
CAediting_965527	chr13_50972353_+	UTR3
CAediting_965528	chr13_50972361_+	UTR3
CAediting_965529	chr13_50972363_+	UTR3
CAediting_965530	chr13_50972369_+	UTR3
CAediting_965531	chr13_50972373_+	UTR3
CAediting_965532	chr13_50972386_+	UTR3
CAediting_965533	chr13_50972392_+	UTR3
CAediting_965534	chr13_50972393_+	UTR3
CAediting_965535	chr13_50972404_+	UTR3
CAediting_965536	chr13_50972426_+	UTR3
CAediting_965537	chr13_50972429_+	UTR3
CAediting_965538	chr13_50972440_+	UTR3
CAediting_965539	chr13_50972442_+	UTR3
CAediting_965540	chr13_50972445_+	UTR3
CAediting_965541	chr13_50972450_+	UTR3
CAediting_965542	chr13_50972455_+	UTR3
CAediting_965543	chr13_50972460_+	UTR3
CAediting_965544	chr13_50972467_+	UTR3
CAediting_965545	chr13_50972486_+	UTR3
CAediting_965546	chr13_50972487_+	UTR3
CAediting_965547	chr13_50972488_+	UTR3
CAediting_965548	chr13_50972489_+	UTR3
CAediting_965549	chr13_50972490_+	UTR3
CAediting_965550	chr13_50972491_+	UTR3
CAediting_965551	chr13_50972492_+	UTR3
CAediting_965552	chr13_50972493_+	UTR3
CAediting_965553	chr13_50972494_+	UTR3
CAediting_965554	chr13_50972496_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_965431	chr13_50937246_+	SINE	Alu	AluJb
CAediting_965432	chr13_50937322_+	SINE	Alu	AluJb
CAediting_965433	chr13_50937355_+	SINE	Alu	AluJb
CAediting_965434	chr13_50937356_+	SINE	Alu	AluJb
CAediting_965435	chr13_50937361_+	SINE	Alu	AluJb
CAediting_965436	chr13_50937363_+	SINE	Alu	AluJb
CAediting_965437	chr13_50937367_+	SINE	Alu	AluJb
CAediting_965438	chr13_50937370_+	SINE	Alu	AluJb
CAediting_965439	chr13_50937437_+	SINE	Alu	AluJb
CAediting_965440	chr13_50937489_+	SINE	Alu	AluJb
CAediting_965441	chr13_50938977_+	SINE	Alu	AluJr4
CAediting_965442	chr13_50938980_+	SINE	Alu	AluJr4
CAediting_965443	chr13_50939236_+	SINE	Alu	AluY
CAediting_965444	chr13_50939242_+	SINE	Alu	AluY
CAediting_965445	chr13_50939263_+	SINE	Alu	AluY
CAediting_965446	chr13_50939278_+	SINE	Alu	AluY
CAediting_965447	chr13_50939367_+	SINE	Alu	AluY
CAediting_965448	chr13_50939369_+	SINE	Alu	AluY
CAediting_965449	chr13_50939373_+	SINE	Alu	AluJr4
CAediting_965450	chr13_50939399_+	SINE	Alu	AluJr4
CAediting_965451	chr13_50939405_+	SINE	Alu	AluJr4
CAediting_965452	chr13_50939430_+	SINE	Alu	AluJr4
CAediting_965453	chr13_50939435_+	SINE	Alu	AluJr4
CAediting_965454	chr13_50939440_+	SINE	Alu	AluJr4
CAediting_965455	chr13_50939459_+	SINE	Alu	AluJr4
CAediting_965456	chr13_50939466_+	SINE	Alu	AluJr4
CAediting_965457	chr13_50939475_+	SINE	Alu	AluJr4
CAediting_965458	chr13_50939477_+	SINE	Alu	AluJr4
CAediting_965459	chr13_50939491_+	SINE	Alu	AluJr4
CAediting_965460	chr13_50952061_+	SINE	Alu	FAM
CAediting_965461	chr13_50952062_+	SINE	Alu	FAM
CAediting_965462	chr13_50952427_+	SINE	Alu	AluSz6
CAediting_965463	chr13_50952463_+	SINE	Alu	AluSz6
CAediting_965464	chr13_50952585_+	SINE	Alu	AluSz6
CAediting_965465	chr13_50952648_+	SINE	Alu	AluSz6
CAediting_965466	chr13_50952663_+	SINE	Alu	AluSz6
CAediting_965467	chr13_50964184_+	SINE	Alu	AluSp
CAediting_965468	chr13_50968196_+	SINE	Alu	AluJr4
CAediting_965469	chr13_50968209_+	SINE	Alu	AluJr4
CAediting_965470	chr13_50968216_+	SINE	Alu	AluJr4
CAediting_965471	chr13_50968273_+	SINE	Alu	AluJr4
CAediting_965472	chr13_50968279_+	SINE	Alu	AluJr4
CAediting_965473	chr13_50968280_+	SINE	Alu	AluJr4
CAediting_965474	chr13_50968285_+	SINE	Alu	AluJr4
CAediting_965475	chr13_50968289_+	SINE	Alu	AluJr4
CAediting_965476	chr13_50971420_+	SINE	Alu	AluSz
CAediting_965477	chr13_50971427_+	SINE	Alu	AluSz
CAediting_965478	chr13_50971430_+	SINE	Alu	AluSz
CAediting_965479	chr13_50971440_+	SINE	Alu	AluSz
CAediting_965480	chr13_50971475_+	SINE	Alu	AluSz
CAediting_965481	chr13_50971476_+	SINE	Alu	AluSz
CAediting_965482	chr13_50971480_+	SINE	Alu	AluSz
CAediting_965483	chr13_50971493_+	SINE	Alu	AluSz
CAediting_965484	chr13_50971502_+	SINE	Alu	AluSz
CAediting_965485	chr13_50971505_+	SINE	Alu	AluSz
CAediting_965486	chr13_50971515_+	SINE	Alu	AluSz
CAediting_965487	chr13_50971517_+	SINE	Alu	AluSz
CAediting_965488	chr13_50971557_+	SINE	Alu	AluSz
CAediting_965489	chr13_50971563_+	SINE	Alu	AluSz
CAediting_965490	chr13_50971580_+	SINE	Alu	AluSz
CAediting_965491	chr13_50971588_+	SINE	Alu	AluSz
CAediting_965492	chr13_50971618_+	SINE	Alu	AluSz
CAediting_965493	chr13_50971630_+	SINE	Alu	AluSz
CAediting_965494	chr13_50971635_+	SINE	Alu	AluSz
CAediting_965495	chr13_50971643_+	SINE	Alu	AluSz
CAediting_965496	chr13_50971645_+	SINE	Alu	AluSz
CAediting_965497	chr13_50971657_+	SINE	Alu	AluSz
CAediting_965498	chr13_50972217_+	SINE	Alu	AluJb
CAediting_965499	chr13_50972218_+	SINE	Alu	AluJb
CAediting_965500	chr13_50972223_+	SINE	Alu	AluJb
CAediting_965501	chr13_50972226_+	SINE	Alu	AluJb
CAediting_965502	chr13_50972234_+	SINE	Alu	AluJb
CAediting_965503	chr13_50972239_+	SINE	Alu	AluJb
CAediting_965504	chr13_50972245_+	SINE	Alu	AluJb
CAediting_965505	chr13_50972253_+	SINE	Alu	AluJb
CAediting_965506	chr13_50972255_+	SINE	Alu	AluJb
CAediting_965507	chr13_50972263_+	SINE	Alu	AluJb
CAediting_965508	chr13_50972266_+	SINE	Alu	AluJb
CAediting_965509	chr13_50972272_+	SINE	Alu	AluJb
CAediting_965510	chr13_50972274_+	SINE	Alu	AluJb
CAediting_965511	chr13_50972277_+	SINE	Alu	AluJb
CAediting_965512	chr13_50972287_+	SINE	Alu	AluJb
CAediting_965513	chr13_50972289_+	SINE	Alu	AluJb
CAediting_965514	chr13_50972291_+	SINE	Alu	AluJb
CAediting_965515	chr13_50972295_+	SINE	Alu	AluJb
CAediting_965516	chr13_50972303_+	SINE	Alu	AluJb
CAediting_965517	chr13_50972309_+	SINE	Alu	AluJb
CAediting_965518	chr13_50972311_+	SINE	Alu	AluJb
CAediting_965519	chr13_50972314_+	SINE	Alu	AluJb
CAediting_965520	chr13_50972315_+	SINE	Alu	AluJb
CAediting_965521	chr13_50972316_+	SINE	Alu	AluJb
CAediting_965522	chr13_50972325_+	SINE	Alu	AluJb
CAediting_965523	chr13_50972326_+	SINE	Alu	AluJb
CAediting_965524	chr13_50972332_+	SINE	Alu	AluJb
CAediting_965525	chr13_50972334_+	SINE	Alu	AluJb
CAediting_965526	chr13_50972337_+	SINE	Alu	AluJb
CAediting_965527	chr13_50972353_+	SINE	Alu	AluJb
CAediting_965528	chr13_50972361_+	SINE	Alu	AluJb
CAediting_965529	chr13_50972363_+	SINE	Alu	AluJb
CAediting_965530	chr13_50972369_+	SINE	Alu	AluJb
CAediting_965531	chr13_50972373_+	SINE	Alu	AluJb
CAediting_965532	chr13_50972386_+	SINE	Alu	AluJb
CAediting_965533	chr13_50972392_+	SINE	Alu	AluJb
CAediting_965534	chr13_50972393_+	SINE	Alu	AluJb
CAediting_965535	chr13_50972404_+	SINE	Alu	AluJb
CAediting_965536	chr13_50972426_+	SINE	Alu	AluJb
CAediting_965537	chr13_50972429_+	SINE	Alu	AluJb
CAediting_965538	chr13_50972440_+	SINE	Alu	AluJb
CAediting_965539	chr13_50972442_+	SINE	Alu	AluJb
CAediting_965540	chr13_50972445_+	SINE	Alu	AluJb
CAediting_965541	chr13_50972450_+	SINE	Alu	AluJb
CAediting_965542	chr13_50972455_+	SINE	Alu	AluJb
CAediting_965543	chr13_50972460_+	SINE	Alu	AluJb
CAediting_965544	chr13_50972467_+	SINE	Alu	AluJb
CAediting_965545	chr13_50972486_+	SINE	Alu	AluJb
CAediting_965546	chr13_50972487_+	SINE	Alu	AluJb
CAediting_965547	chr13_50972488_+	SINE	Alu	AluJb
CAediting_965548	chr13_50972489_+	SINE	Alu	AluJb
CAediting_965549	chr13_50972490_+	SINE	Alu	AluJb
CAediting_965550	chr13_50972491_+	SINE	Alu	AluJb
CAediting_965551	chr13_50972492_+	SINE	Alu	AluJb
CAediting_965552	chr13_50972493_+	SINE	Alu	AluJb
CAediting_965553	chr13_50972494_+	SINE	Alu	AluJb
CAediting_965554	chr13_50972496_+	SINE	Alu	AluJb

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RNA A-to-I editing events in the alternative splicing sites for RNASEH2B

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000136104.17.RNASEH2B.

Correlation between RNA A-to-I editing and PSI for ENSG00000136104.17.RNASEH2B.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RNASEH2B

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RNASEH2B

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RNASEH2B

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4716-5p	50972285	50972291	7mer-m8	50972271	50972292	148.00	-14.09
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511a-3p	50972289	50972296	8mer-1a	50972275	50972296	145.00	-18.84
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511a-3p	50972289	50972296	8mer-1a	50972275	50972296	145.00	-18.84
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511a-3p	50972289	50972296	8mer-1a	50972275	50972296	145.00	-18.84
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511a-3p	50972289	50972296	8mer-1a	50972275	50972296	145.00	-18.84
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511b-3p	50972289	50972296	8mer-1a	50972274	50972296	140.00	-17.97
CAediting_965514	chr13_50972291_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6511b-3p	50972289	50972296	8mer-1a	50972274	50972296	140.00	-17.97
CAediting_965534	chr13_50972393_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4691-5p	50972388	50972395	8mer-1a	50972375	50972395	150.00	-18.41
CAediting_965534	chr13_50972393_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6792-3p	50972388	50972395	8mer-1a	50972374	50972395	152.00	-23.93
CAediting_965481	chr13_50971476_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4539	50971470	50971475	6mer	50971451	50971476	141.00	-22.83
CAediting_965481	chr13_50971476_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6078	50971472	50971479	8mer-1a	50971461	50971479	149.00	-21.31
CAediting_965484	chr13_50971502_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6852-5p	50971497	50971502	6mer	50971484	50971503	149.00	-26.62
CAediting_965485	chr13_50971505_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3614-5p	50971498	50971504	7mer-m8	50971482	50971505	152.00	-25.74
CAediting_965485	chr13_50971505_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4691-3p	50971502	50971508	7mer-m8	50971482	50971509	150.00	-26.62
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3190-5p	50971586	50971592	7mer-m8	50971574	50971593	147.00	-18.34
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548s	50971585	50971591	7mer-m8	50971571	50971592	143.00	-12.53
CAediting_965495	chr13_50971643_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6771-5p	50971637	50971644	8mer-1a	50971620	50971644	146.00	-22.24
CAediting_965496	chr13_50971645_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3189-3p	50971639	50971645	7mer-m8	50971623	50971646	157.00	-29.96
CAediting_965496	chr13_50971645_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6813-3p	50971640	50971646	7mer-m8	50971627	50971647	140.00	-10.68
CAediting_965497	chr13_50971657_+	ENSG00000136104.17	ENST00000422660	hsa-miR-106a-3p	50971653	50971658	6mer	50971638	50971659	141.00	-21.13
CAediting_965498	chr13_50972217_+	ENSG00000136104.17	ENST00000422660	hsa-miR-513a-5p	50972211	50972217	7mer-m8	50972201	50972218	156.00	-21.36
CAediting_965498	chr13_50972217_+	ENSG00000136104.17	ENST00000422660	hsa-miR-513a-5p	50972211	50972217	7mer-m8	50972201	50972218	156.00	-21.36
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518a-3p	50972223	50972229	7mer-m8	50972209	50972230	145.00	-17.15
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518a-3p	50972223	50972229	7mer-m8	50972209	50972230	145.00	-17.15
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518b	50972223	50972229	7mer-m8	50972210	50972230	146.00	-21.79
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518c-3p	50972223	50972229	7mer-m8	50972209	50972230	146.00	-18.08
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518d-3p	50972223	50972229	7mer-m8	50972210	50972230	145.00	-17.84
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518e-3p	50972222	50972228	7mer-m8	50972208	50972229	144.00	-14.43
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518f-3p	50972223	50972229	7mer-m8	50972210	50972230	145.00	-17.48
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526a-3p	50972223	50972229	7mer-m8	50972210	50972230	146.00	-17.71
CAediting_965504	chr13_50972245_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1224-3p	50972239	50972246	8mer-1a	50972223	50972246	149.00	-23.80
CAediting_965504	chr13_50972245_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1260a	50972240	50972246	7mer-m8	50972230	50972247	156.00	-25.42
CAediting_965504	chr13_50972245_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1260b	50972240	50972246	7mer-m8	50972229	50972247	153.00	-21.50
CAediting_965504	chr13_50972245_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6749-3p	50972243	50972249	7mer-m8	50972231	50972250	156.00	-26.00
CAediting_965506	chr13_50972255_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6767-3p	50972251	50972256	6mer	50972236	50972257	142.00	-21.62
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4269	50972256	50972262	7mer-m8	50972241	50972263	148.00	-20.40
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4645-5p	50972257	50972263	7mer-m8	50972246	50972264	140.00	-12.95
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4673	50972257	50972263	7mer-m8	50972243	50972264	140.00	-17.74
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6715b-5p	50972256	50972262	7mer-m8	50972243	50972263	153.00	-19.08
CAediting_965508	chr13_50972266_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5195-5p	50972261	50972267	7mer-m8	50972247	50972268	161.00	-24.09
CAediting_965508	chr13_50972266_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6771-3p	50972263	50972269	7mer-m8	50972250	50972270	151.00	-21.51
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3176	50972271	50972277	7mer-m8	50972260	50972278	156.00	-22.92
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3922-3p	50972271	50972277	7mer-m8	50972257	50972278	150.00	-20.15
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6878-3p	50972270	50972276	7mer-m8	50972257	50972277	148.00	-29.26
CAediting_965515	chr13_50972295_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3156-3p	50972290	50972296	7mer-m8	50972277	50972297	140.00	-17.24
CAediting_965515	chr13_50972295_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3156-3p	50972290	50972296	7mer-m8	50972277	50972297	140.00	-17.24
CAediting_965515	chr13_50972295_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4301	50972289	50972296	8mer-1a	50972277	50972296	141.00	-15.44
CAediting_965515	chr13_50972295_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4433a-5p	50972291	50972297	7mer-m8	50972278	50972298	140.00	-15.62
CAediting_965516	chr13_50972303_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4787-5p	50972296	50972302	7mer-m8	50972282	50972303	140.00	-19.90
CAediting_965516	chr13_50972303_+	ENSG00000136104.17	ENST00000422660	hsa-miR-483-5p	50972299	50972305	7mer-m8	50972285	50972306	142.00	-17.66
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3180-5p	50972305	50972312	8mer-1a	50972288	50972312	140.00	-10.97
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3180-5p	50972305	50972312	8mer-1a	50972288	50972312	140.00	-10.97
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3180-5p	50972305	50972312	8mer-1a	50972288	50972312	140.00	-10.97
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520a-5p	50972304	50972311	8mer-1a	50972290	50972311	143.00	-15.06
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-525-5p	50972304	50972311	8mer-1a	50972286	50972311	142.00	-16.97
CAediting_965520	chr13_50972315_+	ENSG00000136104.17	ENST00000422660	hsa-miR-627-3p	50972308	50972315	8mer-1a	50972297	50972315	148.00	-13.99
CAediting_965523	chr13_50972326_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4659a-3p	50972324	50972331	8mer-1a	50972310	50972331	142.00	-8.34
CAediting_965523	chr13_50972326_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4659b-3p	50972324	50972331	8mer-1a	50972310	50972331	142.00	-8.34
CAediting_965523	chr13_50972326_+	ENSG00000136104.17	ENST00000422660	hsa-miR-576-5p	50972321	50972327	7mer-m8	50972307	50972328	152.00	-8.08
CAediting_965524	chr13_50972332_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4659a-3p	50972327	50972333	7mer-m8	50972313	50972334	145.00	-8.14
CAediting_965524	chr13_50972332_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4659b-3p	50972327	50972333	7mer-m8	50972313	50972334	145.00	-8.14
CAediting_965525	chr13_50972334_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5003-3p	50972328	50972334	7mer-m8	50972313	50972335	149.00	-9.00
CAediting_965525	chr13_50972334_+	ENSG00000136104.17	ENST00000422660	hsa-miR-627-3p	50972327	50972333	7mer-m8	50972315	50972334	153.00	-9.15
CAediting_965527	chr13_50972353_+	ENSG00000136104.17	ENST00000422660	hsa-miR-122-3p	50972348	50972353	6mer	50972331	50972354	149.00	-18.45
CAediting_965529	chr13_50972363_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4786-5p	50972361	50972368	8mer-1a	50972347	50972368	159.00	-19.57
CAediting_965529	chr13_50972363_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6502-3p	50972360	50972366	7mer-m8	50972347	50972367	140.00	-10.75
CAediting_965531	chr13_50972373_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3622b-3p	50972366	50972372	7mer-m8	50972347	50972373	149.00	-23.46
CAediting_965531	chr13_50972373_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6804-3p	50972367	50972373	7mer-m8	50972352	50972374	143.00	-16.26
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1224-3p	50972385	50972392	8mer-1a	50972373	50972392	156.00	-26.82
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1260a	50972386	50972392	7mer-m8	50972376	50972393	160.00	-25.97
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1260b	50972386	50972392	7mer-m8	50972375	50972393	157.00	-20.68
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3156-3p	50972387	50972392	6mer	50972373	50972393	142.00	-26.14
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3156-3p	50972387	50972392	6mer	50972373	50972393	142.00	-26.14
CAediting_965533	chr13_50972392_+	ENSG00000136104.17	ENST00000422660	hsa-miR-629-3p	50972389	50972395	7mer-m8	50972375	50972396	159.00	-22.69
CAediting_965537	chr13_50972429_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3651	50972427	50972433	7mer-m8	50972412	50972434	154.00	-22.77
CAediting_965542	chr13_50972455_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1295a	50972453	50972459	7mer-m8	50972439	50972460	154.00	-24.34
CAediting_965542	chr13_50972455_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4743-5p	50972451	50972457	7mer-m8	50972436	50972458	147.00	-22.55
CAediting_965543	chr13_50972460_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3130-5p	50972457	50972463	7mer-1a	50972443	50972463	143.00	-26.99
CAediting_965543	chr13_50972460_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3130-5p	50972457	50972463	7mer-1a	50972443	50972463	143.00	-26.99
CAediting_965545	chr13_50972486_+	ENSG00000136104.17	ENST00000422660	hsa-miR-12119	50972480	50972487	8mer-1a	50972462	50972487	153.00	-20.82
CAediting_965545	chr13_50972486_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4649-3p	50972479	50972486	8mer-1a	50972467	50972486	149.00	-18.67
CAediting_965546	chr13_50972487_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526b-5p	50972481	50972488	8mer-1a	50972464	50972488	159.00	-19.96
CAediting_965482	chr13_50971480_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4511	50971479	50971484	6mer	50971463	50971485	149.00	-19.57
CAediting_965482	chr13_50971480_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548b-3p	50971478	50971484	7mer-m8	50971466	50971485	145.00	-11.64
CAediting_965500	chr13_50972223_+	ENSG00000136104.17	ENST00000422660	hsa-miR-371a-3p	50972221	50972227	7mer-m8	50972206	50972228	144.00	-13.81
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-384	50972306	50972313	8mer-1a	50972294	50972313	154.00	-10.44
CAediting_965530	chr13_50972369_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4740-3p	50972364	50972370	7mer-m8	50972350	50972371	148.00	-17.81
CAediting_965532	chr13_50972386_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6793-3p	50972381	50972387	7mer-m8	50972369	50972388	148.00	-25.14

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_965498	chr13_50972217_+	ENSG00000136104.17	ENST00000422660	hsa-miR-10399-5p	50972212	50972218	7mer-m8	50972199	50972219	140	-10.81
CAediting_965499	chr13_50972218_+	ENSG00000136104.17	ENST00000422660	hsa-miR-10399-5p	50972212	50972218	7mer-m8	50972199	50972219	140	-10.81
CAediting_965484	chr13_50971502_+	ENSG00000136104.17	ENST00000422660	hsa-miR-12126	50971497	50971504	8mer-1a	50971481	50971504	147	-13.98
CAediting_965493	chr13_50971630_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1229-5p	50971623	50971629	7mer-m8	50971605	50971630	152	-27.35
CAediting_965487	chr13_50971517_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1271-3p	50971515	50971521	7mer-m8	50971503	50971522	155	-21.22
CAediting_965545	chr13_50972486_+	ENSG00000136104.17	ENST00000422660	hsa-miR-1304-5p	50972479	50972486	8mer-1a	50972466	50972486	148	-15.93
CAediting_965541	chr13_50972450_+	ENSG00000136104.17	ENST00000422660	hsa-miR-143-5p	50972444	50972450	7mer-m8	50972429	50972451	155	-20.13
CAediting_965502	chr13_50972234_+	ENSG00000136104.17	ENST00000422660	hsa-miR-150-5p	50972228	50972234	7mer-m8	50972214	50972235	140	-15.8
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-25-3p	50971435	50971441	7mer-m8	50971417	50971442	153	-21.84
CAediting_965541	chr13_50972450_+	ENSG00000136104.17	ENST00000422660	hsa-miR-301a-3p	50972446	50972451	6mer	50972430	50972452	140	-10.44
CAediting_965541	chr13_50972450_+	ENSG00000136104.17	ENST00000422660	hsa-miR-301b-3p	50972446	50972451	6mer	50972430	50972452	140	-11.48
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-302a-3p	50972222	50972228	7mer-m8	50972208	50972229	143	-11.02
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-302b-3p	50972222	50972228	7mer-m8	50972207	50972229	141	-10.21
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-302c-3p	50972222	50972228	7mer-m8	50972209	50972229	145	-12.53
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-302d-3p	50972222	50972228	7mer-m8	50972207	50972229	141	-9.38
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-302e	50972222	50972228	7mer-m8	50972213	50972229	141	-8.62
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3064-5p	50971587	50971592	6mer	50971573	50971593	148	-24.74
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3085-3p	50971587	50971592	6mer	50971573	50971593	142	-21.75
CAediting_965495	chr13_50971643_+	ENSG00000136104.17	ENST00000422660	hsa-miR-30c-1-3p	50971636	50971643	8mer-1a	50971615	50971643	147	-20.65
CAediting_965495	chr13_50971643_+	ENSG00000136104.17	ENST00000422660	hsa-miR-30c-2-3p	50971636	50971643	8mer-1a	50971622	50971643	143	-14.17
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3143	50971582	50971587	6mer	50971563	50971588	146	-14.96
CAediting_965477	chr13_50971427_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3145-5p	50971422	50971429	8mer-1a	50971408	50971429	142	-10.65
CAediting_965476	chr13_50971420_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3187-5p	50971414	50971421	8mer-1a	50971396	50971421	149	-21.5
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-32-5p	50971435	50971441	7mer-m8	50971416	50971442	149	-12.35
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3609	50972224	50972229	6mer	50972208	50972230	140	-19.28
CAediting_965493	chr13_50971630_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3616-5p	50971628	50971634	7mer-m8	50971614	50971635	140	-11.11
CAediting_965494	chr13_50971635_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3616-5p	50971628	50971634	7mer-m8	50971614	50971635	140	-11.11
CAediting_965542	chr13_50972455_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3652	50972451	50972457	7mer-m8	50972439	50972458	148	-21.9
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3663-5p	50972271	50972277	7mer-m8	50972259	50972278	144	-20.26
CAediting_965511	chr13_50972277_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3663-5p	50972271	50972277	7mer-m8	50972259	50972278	144	-20.26
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-367-3p	50971435	50971441	7mer-m8	50971421	50971442	145	-9.6
CAediting_965530	chr13_50972369_+	ENSG00000136104.17	ENST00000422660	hsa-miR-3672	50972362	50972368	7mer-m8	50972349	50972369	152	-13.77
CAediting_965535	chr13_50972404_+	ENSG00000136104.17	ENST00000422660	hsa-miR-371a-5p	50972398	50972404	7mer-m8	50972386	50972405	147	-15.48
CAediting_965530	chr13_50972369_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4329	50972363	50972369	7mer-m8	50972352	50972370	145	-17.87
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4423-3p	50972256	50972262	7mer-m8	50972243	50972263	140	-10.27
CAediting_965494	chr13_50971635_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4463	50971633	50971638	6mer	50971623	50971639	150	-28.66
CAediting_965483	chr13_50971493_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4478	50971490	50971496	7mer-m8	50971480	50971497	154	-25.02
CAediting_965494	chr13_50971635_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4499	50971632	50971638	7mer-m8	50971624	50971639	145	-17.2
CAediting_965483	chr13_50971493_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4649-3p	50971487	50971493	7mer-m8	50971474	50971494	140	-12.25
CAediting_965525	chr13_50972334_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4735-5p	50972331	50972337	7mer-m8	50972317	50972338	140	-4.28
CAediting_965526	chr13_50972337_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4735-5p	50972331	50972337	7mer-m8	50972317	50972338	140	-4.28
CAediting_965488	chr13_50971557_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4775	50971550	50971556	7mer-m8	50971536	50971557	145	-3.98
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4794	50971586	50971592	7mer-m8	50971571	50971593	151	-18.19
CAediting_965493	chr13_50971630_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4795-5p	50971627	50971634	8mer-1a	50971613	50971634	153	-12.22
CAediting_965541	chr13_50972450_+	ENSG00000136104.17	ENST00000422660	hsa-miR-504-3p	50972447	50972454	8mer-1a	50972434	50972454	155	-24.17
CAediting_965500	chr13_50972223_+	ENSG00000136104.17	ENST00000422660	hsa-miR-512-3p	50972221	50972227	7mer-m8	50972204	50972228	151	-16.62
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-512-3p	50972221	50972227	7mer-m8	50972204	50972228	151	-16.62
CAediting_965500	chr13_50972223_+	ENSG00000136104.17	ENST00000422660	hsa-miR-512-3p	50972221	50972227	7mer-m8	50972204	50972228	151	-16.62
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-512-3p	50972221	50972227	7mer-m8	50972204	50972228	151	-16.62
CAediting_965476	chr13_50971420_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5189-5p	50971414	50971421	8mer-1a	50971399	50971421	152	-27.01
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518d-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518d-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518e-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518e-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518f-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-518f-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519a-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519a-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519b-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519b-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519c-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519c-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-519d-3p	50972223	50972229	7mer-m8	50972210	50972230	146	-14.53
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520a-3p	50972222	50972228	7mer-m8	50972208	50972229	140	-11.03
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520b-3p	50972222	50972228	7mer-m8	50972210	50972229	141	-16.52
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520c-3p	50972222	50972228	7mer-m8	50972209	50972229	146	-16.52
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520c-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520c-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520d-3p	50972222	50972228	7mer-m8	50972208	50972229	140	-13.09
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520e-3p	50972222	50972228	7mer-m8	50972209	50972229	140	-13.32
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520g-3p	50972224	50972230	7mer-m8	50972209	50972231	151	-15.87
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-520h	50972224	50972230	7mer-m8	50972210	50972231	150	-15.08
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-522-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-522-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-523-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-523-5p	50972304	50972311	8mer-1a	50972291	50972311	146	-12.9
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526a-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526a-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965517	chr13_50972309_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526a-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965518	chr13_50972311_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526a-5p	50972304	50972311	8mer-1a	50972289	50972311	143	-14.95
CAediting_965501	chr13_50972226_+	ENSG00000136104.17	ENST00000422660	hsa-miR-526b-3p	50972223	50972229	7mer-m8	50972210	50972230	146	-16.66
CAediting_965530	chr13_50972369_+	ENSG00000136104.17	ENST00000422660	hsa-miR-544b	50972365	50972370	6mer	50972348	50972371	141	-20.63
CAediting_965536	chr13_50972426_+	ENSG00000136104.17	ENST00000422660	hsa-miR-549a-5p	50972424	50972430	7mer-m8	50972411	50972431	146	-17.91
CAediting_965537	chr13_50972429_+	ENSG00000136104.17	ENST00000422660	hsa-miR-549a-5p	50972424	50972430	7mer-m8	50972411	50972431	146	-17.91
CAediting_965487	chr13_50971517_+	ENSG00000136104.17	ENST00000422660	hsa-miR-550a-3-5p	50971515	50971521	7mer-m8	50971503	50971522	140	-14.18
CAediting_965487	chr13_50971517_+	ENSG00000136104.17	ENST00000422660	hsa-miR-550a-5p	50971515	50971521	7mer-m8	50971500	50971522	140	-17.97
CAediting_965487	chr13_50971517_+	ENSG00000136104.17	ENST00000422660	hsa-miR-550a-5p	50971515	50971521	7mer-m8	50971500	50971522	140	-17.97
CAediting_965507	chr13_50972263_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5571-3p	50972259	50972265	7mer-m8	50972243	50972266	142	-21.09
CAediting_965508	chr13_50972266_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5571-3p	50972259	50972265	7mer-m8	50972243	50972266	142	-21.09
CAediting_965527	chr13_50972353_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5589-3p	50972351	50972357	7mer-m8	50972336	50972358	155	-19.59
CAediting_965485	chr13_50971505_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5690	50971502	50971508	7mer-m8	50971489	50971509	145	-16.74
CAediting_965488	chr13_50971557_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5692a	50971553	50971559	7mer-m8	50971539	50971560	140	-7.52
CAediting_965488	chr13_50971557_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5692a	50971553	50971559	7mer-m8	50971539	50971560	140	-7.52
CAediting_965493	chr13_50971630_+	ENSG00000136104.17	ENST00000422660	hsa-miR-573	50971628	50971634	7mer-m8	50971611	50971635	149	-17.95
CAediting_965494	chr13_50971635_+	ENSG00000136104.17	ENST00000422660	hsa-miR-573	50971628	50971634	7mer-m8	50971611	50971635	149	-17.95
CAediting_965542	chr13_50972455_+	ENSG00000136104.17	ENST00000422660	hsa-miR-5787	50972452	50972457	6mer	50972438	50972458	145	-27.7
CAediting_965476	chr13_50971420_+	ENSG00000136104.17	ENST00000422660	hsa-miR-612	50971414	50971421	8mer-1a	50971391	50971421	147	-30.13
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6131	50972272	50972278	7mer-m8	50972261	50972279	140	-16.72
CAediting_965511	chr13_50972277_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6131	50972272	50972278	7mer-m8	50972261	50972279	140	-16.72
CAediting_965491	chr13_50971588_+	ENSG00000136104.17	ENST00000422660	hsa-miR-664a-5p	50971586	50971592	7mer-m8	50971570	50971593	141	-15.8
CAediting_965535	chr13_50972404_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6715b-3p	50972397	50972403	7mer-m8	50972381	50972404	144	-20.42
CAediting_965516	chr13_50972303_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6751-5p	50972296	50972302	7mer-m8	50972282	50972303	145	-18.14
CAediting_965502	chr13_50972234_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6778-3p	50972230	50972236	7mer-m8	50972217	50972237	143	-13.97
CAediting_965495	chr13_50971643_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6788-5p	50971636	50971643	8mer-1a	50971621	50971643	150	-23.39
CAediting_965516	chr13_50972303_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6803-5p	50972296	50972302	7mer-m8	50972282	50972303	140	-16.78
CAediting_965509	chr13_50972272_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6843-3p	50972270	50972276	7mer-m8	50972258	50972277	148	-17.92
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6843-3p	50972270	50972276	7mer-m8	50972258	50972277	148	-17.92
CAediting_965511	chr13_50972277_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6843-3p	50972270	50972276	7mer-m8	50972258	50972277	148	-17.92
CAediting_965509	chr13_50972272_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6848-3p	50972270	50972276	7mer-m8	50972260	50972277	142	-15.32
CAediting_965510	chr13_50972274_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6848-3p	50972270	50972276	7mer-m8	50972260	50972277	142	-15.32
CAediting_965511	chr13_50972277_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6848-3p	50972270	50972276	7mer-m8	50972260	50972277	142	-15.32
CAediting_965476	chr13_50971420_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6860	50971414	50971421	8mer-1a	50971401	50971421	142	-18.16
CAediting_965530	chr13_50972369_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6864-3p	50972362	50972368	7mer-m8	50972349	50972369	140	-10.04
CAediting_965502	chr13_50972234_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6878-3p	50972232	50972239	8mer-1a	50972219	50972239	142	-14.61
CAediting_965503	chr13_50972239_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6878-3p	50972232	50972239	8mer-1a	50972219	50972239	142	-14.61
CAediting_965504	chr13_50972245_+	ENSG00000136104.17	ENST00000422660	hsa-miR-6881-3p	50972244	50972249	6mer	50972227	50972250	143	-22.87
CAediting_965498	chr13_50972217_+	ENSG00000136104.17	ENST00000422660	hsa-miR-7151-3p	50972210	50972217	8mer-1a	50972197	50972217	148	-15.25
CAediting_965483	chr13_50971493_+	ENSG00000136104.17	ENST00000422660	hsa-miR-7160-5p	50971488	50971494	7mer-m8	50971475	50971495	142	-18.32
CAediting_965483	chr13_50971493_+	ENSG00000136104.17	ENST00000422660	hsa-miR-7162-3p	50971488	50971493	6mer	50971476	50971494	143	-17.17
CAediting_965512	chr13_50972287_+	ENSG00000136104.17	ENST00000422660	hsa-miR-744-3p	50972282	50972288	7mer-m8	50972265	50972289	149	-15.79
CAediting_965513	chr13_50972289_+	ENSG00000136104.17	ENST00000422660	hsa-miR-744-3p	50972282	50972288	7mer-m8	50972265	50972289	149	-15.79
CAediting_965537	chr13_50972429_+	ENSG00000136104.17	ENST00000422660	hsa-miR-7705	50972427	50972433	7mer-m8	50972412	50972434	145	-19.94
CAediting_965490	chr13_50971580_+	ENSG00000136104.17	ENST00000422660	hsa-miR-7855-5p	50971577	50971582	6mer	50971563	50971583	140	-24.29
CAediting_965538	chr13_50972440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-8070	50972436	50972441	6mer	50972422	50972442	146	-12.53
CAediting_965539	chr13_50972442_+	ENSG00000136104.17	ENST00000422660	hsa-miR-8070	50972436	50972441	6mer	50972422	50972442	146	-12.53
CAediting_965494	chr13_50971635_+	ENSG00000136104.17	ENST00000422660	hsa-miR-873-3p	50971633	50971639	7mer-m8	50971619	50971640	149	-22.31
CAediting_965484	chr13_50971502_+	ENSG00000136104.17	ENST00000422660	hsa-miR-887-5p	50971495	50971501	7mer-m8	50971481	50971502	145	-20.79
CAediting_965495	chr13_50971643_+	ENSG00000136104.17	ENST00000422660	hsa-miR-887-5p	50971637	50971644	8mer-1a	50971625	50971644	143	-15.63
CAediting_965535	chr13_50972404_+	ENSG00000136104.17	ENST00000422660	hsa-miR-888-5p	50972399	50972405	7mer-m8	50972384	50972406	144	-11.5
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-92a-3p	50971435	50971441	7mer-m8	50971417	50971442	145	-20.79
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-92a-3p	50971435	50971441	7mer-m8	50971417	50971442	145	-20.79
CAediting_965479	chr13_50971440_+	ENSG00000136104.17	ENST00000422660	hsa-miR-92b-3p	50971435	50971441	7mer-m8	50971417	50971442	149	-20.91

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000136104.17	ENST00000422660	hsa-miR-200b-3p	50973559	50973565	7mer-m8	50973536	50973566	145	-20.36
CAediting_1229415	chr17_67471547_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548aa	50973280	50973286	7mer-m8	50973265	50973287	152	-14.61
CAediting_1399425	chr20_1392958_-	ENSG00000136104.17	ENST00000422660	hsa-miR-6869-5p	50971623	50971629	7mer-m8	50971608	50971630	153	-29.85
CAediting_396018	chr5_1062918_-	ENSG00000136104.17	ENST00000422660	hsa-miR-4635	50970229	50970235	7mer-m8	50970216	50970236	150	-16.27
CAediting_524911	chr7_5495852_-	ENSG00000136104.17	ENST00000422660	hsa-miR-589-3p	50971406	50971412	7mer-m8	50971389	50971413	161	-19.67
CAediting_524911	chr7_5495852_-	ENSG00000136104.17	ENST00000422660	hsa-miR-589-3p	50973054	50973060	7mer-m8	50973039	50973061	152	-14.7

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_86358	chr1_109598906_+	ENSG00000136104.17	ENST00000422660	hsa-miR-197-5p	50971622	50971629	8mer-1a	50971604	50971629	143	-23.25
CAediting_604450	chr7_133034877_-	ENSG00000136104.17	ENST00000422660	hsa-miR-3654	50970465	50970472	8mer-1a	50970453	50970472	152	-17.5
CAediting_77128	chr1_85133844_+	ENSG00000136104.17	ENST00000422660	hsa-miR-4423-3p	50972256	50972262	7mer-m8	50972243	50972263	140	-10.27
CAediting_1229413	chr17_67471544_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548aa	50973333	50973340	8mer-1a	50973316	50973340	146	-5.98
CAediting_1229415	chr17_67471547_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548aa	50973333	50973340	8mer-1a	50973316	50973340	146	-5.98
CAediting_1229414	chr17_67471546_+	ENSG00000136104.17	ENST00000422660	hsa-miR-548aa	50973333	50973340	8mer-1a	50973316	50973340	146	-5.98
CAediting_1399425	chr20_1392958_-	ENSG00000136104.17	ENST00000422660	hsa-miR-6869-5p	50972686	50972692	7mer-m8	50972672	50972693	145	-13.59

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for RNASEH2B

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for RNASEH2B

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
ESCA	CAediting_965529	chr13_50972363_+	0.00196757128861292	0.385601216985929	.	.	.	.
OV	CAediting_965534	chr13_50972393_+	0.003793969404619	0.362427814439116	0.000898241398954825	0.411259122065988	.	.

Top

Relation with cancer stages for RNASEH2B

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for RNASEH2B

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
OV	CAediting_965514	chr13_50972291_+	0.00389063216769003	0.00888169	25.5788

Top

RelatedDrugs for RNASEH2B

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for RNASEH2B

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
RNASEH2B	C3489724	Aicardi-Goutieres Syndrome 2	8	CTD_human;GENOMICS_ENGLAND;UNIPROT
RNASEH2B	C0013421	Dystonia	1	GENOMICS_ENGLAND
RNASEH2B	C0037771	Paraparesis, Spastic	1	GENOMICS_ENGLAND
RNASEH2B	C0393591	AICARDI-GOUTIERES SYNDROME	1	CTD_human;GENOMICS_ENGLAND
RNASEH2B	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene