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Editing gene: CEP97 (CAeditome ID:79598)

Gene summary for CEP97

Gene summary

Gene information	Gene symbol	CEP97
	Gene ID	79598
	Gene name	centrosomal protein 97
	Synonyms	2810403B08Rik\|LRRIQ2
	Cytomap	3q12.3
	Type of gene	protein-coding
	Description	centrosomal protein of 97 kDaleucine-rich repeat and IQ domain-containing protein 2leucine-rich repeats and IQ motif containing 2
	Modification date	20210518
	UniProtAcc	Q8IW35
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
CEP97	GO:0005813	Centrosomal protein of 97 kDa	21399614
CEP97	GO:0005829	Centrosomal protein of 97 kDa	0000052
CEP97	GO:0034451	Centrosomal protein of 97 kDa	0000052
CEP97	GO:0032991	Centrosomal protein of 97 kDa	24421332

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RNA A-to-I events for CEP97

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000182504.9

RNA A-to-I editing events in Cancer.

CAediting_298600(101729244, +), CAediting_298601(101729263, +), CAediting_298602(101729599, +), CAediting_298603(101729603, +), CAediting_298604(101729661, +), CAediting_298605(101729701, +), CAediting_298606(101731421, +), CAediting_298607(101731463, +), CAediting_298608(101743419, +), CAediting_298609(101745360, +), CAediting_298610(101745361, +), CAediting_298611(101748011, +), CAediting_298612(101748052, +), CAediting_298613(101766955, +), CAediting_298614(101766956, +), CAediting_298615(101766997, +), CAediting_298616(101767027, +), CAediting_298617(101767038, +), CAediting_298618(101768572, +), CAediting_298619(101768574, +), CAediting_298620(101768580, +), CAediting_298621(101768581, +), CAediting_298622(101768586, +), CAediting_298623(101768597, +), CAediting_298624(101768603, +), CAediting_298625(101768608, +), CAediting_298626(101768616, +), CAediting_298627(101768621, +), CAediting_298628(101768626, +), CAediting_298629(101768634, +), CAediting_298630(101768635, +), CAediting_298631(101768637, +), CAediting_298632(101768654, +), CAediting_298633(101768657, +), CAediting_298634(101769382, +), CAediting_298635(101769410, +), CAediting_298636(101769413, +), CAediting_298637(101769430, +), CAediting_298638(101769462, +), CAediting_298639(101769469, +), CAediting_298640(101769499, +), CAediting_298641(101769525, +), CAediting_298642(101769537, +), CAediting_298643(101769538, +), CAediting_298644(101769577, +), CAediting_298645(101769578, +), CAediting_298646(101769590, +), CAediting_298647(101769592, +), CAediting_298648(101769612, +), CAediting_298649(101770047, +), CAediting_298650(101770049, +), CAediting_298651(101770051, +), CAediting_298652(101770065, +), CAediting_298653(101770068, +), CAediting_298654(101770124, +), CAediting_298655(101770125, +), CAediting_298656(101770154, +), CAediting_298657(101770158, +), CAediting_298658(101770159, +), CAediting_298659(101770164, +), CAediting_298660(101770172, +), CAediting_298661(101770177, +), CAediting_298662(101770190, +), CAediting_298663(101770205, +), CAediting_298664(101770208, +), CAediting_298665(101770210, +), CAediting_298666(101770222, +), CAediting_298667(101770234, +), CAediting_298668(101770245, +), CAediting_298669(101770266, +), CAediting_298670(101770270, +), CAediting_298671(101770283, +), CAediting_298672(101770284, +), CAediting_298673(101770297, +), CAediting_298674(101770299, +), CAediting_298675(101770306, +), CAediting_298676(101770310, +), CAediting_298677(101770315, +),

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RNA editing positional annotations for CEP97 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_298600	chr3_101729244_+	ncRNA_intronic
CAediting_298601	chr3_101729263_+	ncRNA_intronic
CAediting_298602	chr3_101729599_+	ncRNA_intronic
CAediting_298603	chr3_101729603_+	ncRNA_intronic
CAediting_298604	chr3_101729661_+	ncRNA_intronic
CAediting_298605	chr3_101729701_+	ncRNA_intronic
CAediting_298606	chr3_101731421_+	ncRNA_intronic
CAediting_298607	chr3_101731463_+	ncRNA_intronic
CAediting_298608	chr3_101743419_+	ncRNA_intronic
CAediting_298609	chr3_101745360_+	ncRNA_intronic
CAediting_298610	chr3_101745361_+	ncRNA_intronic
CAediting_298611	chr3_101748011_+	ncRNA_intronic
CAediting_298612	chr3_101748052_+	ncRNA_intronic
CAediting_298613	chr3_101766955_+	UTR3
CAediting_298614	chr3_101766956_+	UTR3
CAediting_298615	chr3_101766997_+	UTR3
CAediting_298616	chr3_101767027_+	UTR3
CAediting_298617	chr3_101767038_+	UTR3
CAediting_298618	chr3_101768572_+	UTR3
CAediting_298619	chr3_101768574_+	UTR3
CAediting_298620	chr3_101768580_+	UTR3
CAediting_298621	chr3_101768581_+	UTR3
CAediting_298622	chr3_101768586_+	UTR3
CAediting_298623	chr3_101768597_+	UTR3
CAediting_298624	chr3_101768603_+	UTR3
CAediting_298625	chr3_101768608_+	UTR3
CAediting_298626	chr3_101768616_+	UTR3
CAediting_298627	chr3_101768621_+	UTR3
CAediting_298628	chr3_101768626_+	UTR3
CAediting_298629	chr3_101768634_+	UTR3
CAediting_298630	chr3_101768635_+	UTR3
CAediting_298631	chr3_101768637_+	UTR3
CAediting_298632	chr3_101768654_+	UTR3
CAediting_298633	chr3_101768657_+	UTR3
CAediting_298634	chr3_101769382_+	UTR3
CAediting_298635	chr3_101769410_+	UTR3
CAediting_298636	chr3_101769413_+	UTR3
CAediting_298637	chr3_101769430_+	UTR3
CAediting_298638	chr3_101769462_+	UTR3
CAediting_298639	chr3_101769469_+	UTR3
CAediting_298640	chr3_101769499_+	UTR3
CAediting_298641	chr3_101769525_+	UTR3
CAediting_298642	chr3_101769537_+	UTR3
CAediting_298643	chr3_101769538_+	UTR3
CAediting_298644	chr3_101769577_+	UTR3
CAediting_298645	chr3_101769578_+	UTR3
CAediting_298646	chr3_101769590_+	UTR3
CAediting_298647	chr3_101769592_+	UTR3
CAediting_298648	chr3_101769612_+	UTR3
CAediting_298649	chr3_101770047_+	UTR3
CAediting_298650	chr3_101770049_+	UTR3
CAediting_298651	chr3_101770051_+	UTR3
CAediting_298652	chr3_101770065_+	UTR3
CAediting_298653	chr3_101770068_+	UTR3
CAediting_298654	chr3_101770124_+	UTR3
CAediting_298655	chr3_101770125_+	UTR3
CAediting_298656	chr3_101770154_+	UTR3
CAediting_298657	chr3_101770158_+	UTR3
CAediting_298658	chr3_101770159_+	UTR3
CAediting_298659	chr3_101770164_+	UTR3
CAediting_298660	chr3_101770172_+	UTR3
CAediting_298661	chr3_101770177_+	UTR3
CAediting_298662	chr3_101770190_+	UTR3
CAediting_298663	chr3_101770205_+	UTR3
CAediting_298664	chr3_101770208_+	UTR3
CAediting_298665	chr3_101770210_+	UTR3
CAediting_298666	chr3_101770222_+	UTR3
CAediting_298667	chr3_101770234_+	UTR3
CAediting_298668	chr3_101770245_+	UTR3
CAediting_298669	chr3_101770266_+	UTR3
CAediting_298670	chr3_101770270_+	UTR3
CAediting_298671	chr3_101770283_+	UTR3
CAediting_298672	chr3_101770284_+	UTR3
CAediting_298673	chr3_101770297_+	UTR3
CAediting_298674	chr3_101770299_+	UTR3
CAediting_298675	chr3_101770306_+	UTR3
CAediting_298676	chr3_101770310_+	UTR3
CAediting_298677	chr3_101770315_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_298600	chr3_101729244_+	SINE	Alu	AluSz6
CAediting_298601	chr3_101729263_+	SINE	Alu	AluSz6
CAediting_298602	chr3_101729599_+	SINE	Alu	AluJr4
CAediting_298603	chr3_101729603_+	SINE	Alu	AluJr4
CAediting_298604	chr3_101729661_+	SINE	Alu	AluJr4
CAediting_298605	chr3_101729701_+	SINE	Alu	AluJr4
CAediting_298606	chr3_101731421_+	SINE	Alu	AluJo
CAediting_298607	chr3_101731463_+	SINE	Alu	AluJo
CAediting_298608	chr3_101743419_+	SINE	Alu	AluJr4
CAediting_298609	chr3_101745360_+	SINE	Alu	AluJb
CAediting_298610	chr3_101745361_+	SINE	Alu	AluJb
CAediting_298611	chr3_101748011_+	SINE	Alu	AluJr
CAediting_298612	chr3_101748052_+	SINE	Alu	AluJr
CAediting_298613	chr3_101766955_+	SINE	Alu	FRAM
CAediting_298614	chr3_101766956_+	SINE	Alu	FRAM
CAediting_298615	chr3_101766997_+	SINE	Alu	FRAM
CAediting_298616	chr3_101767027_+	SINE	Alu	FRAM
CAediting_298617	chr3_101767038_+	SINE	Alu	FRAM
CAediting_298618	chr3_101768572_+	SINE	Alu	AluJr
CAediting_298619	chr3_101768574_+	SINE	Alu	AluJr
CAediting_298620	chr3_101768580_+	SINE	Alu	AluJr
CAediting_298621	chr3_101768581_+	SINE	Alu	AluJr
CAediting_298622	chr3_101768586_+	SINE	Alu	AluJr
CAediting_298623	chr3_101768597_+	SINE	Alu	AluJr
CAediting_298624	chr3_101768603_+	SINE	Alu	AluJr
CAediting_298625	chr3_101768608_+	SINE	Alu	AluJr
CAediting_298626	chr3_101768616_+	SINE	Alu	AluJr
CAediting_298627	chr3_101768621_+	SINE	Alu	AluJr
CAediting_298628	chr3_101768626_+	SINE	Alu	AluJr
CAediting_298629	chr3_101768634_+	SINE	Alu	AluJr
CAediting_298630	chr3_101768635_+	SINE	Alu	AluJr
CAediting_298631	chr3_101768637_+	SINE	Alu	AluJr
CAediting_298632	chr3_101768654_+	SINE	Alu	AluJr
CAediting_298633	chr3_101768657_+	SINE	Alu	AluJr
CAediting_298634	chr3_101769382_+	SINE	Alu	AluSq2
CAediting_298635	chr3_101769410_+	SINE	Alu	AluSq2
CAediting_298636	chr3_101769413_+	SINE	Alu	AluSq2
CAediting_298637	chr3_101769430_+	SINE	Alu	AluSq2
CAediting_298638	chr3_101769462_+	SINE	Alu	AluSq2
CAediting_298639	chr3_101769469_+	SINE	Alu	AluSq2
CAediting_298640	chr3_101769499_+	SINE	Alu	AluSq2
CAediting_298641	chr3_101769525_+	SINE	Alu	AluSq2
CAediting_298642	chr3_101769537_+	SINE	Alu	AluSq2
CAediting_298643	chr3_101769538_+	SINE	Alu	AluSq2
CAediting_298644	chr3_101769577_+	SINE	Alu	AluSq2
CAediting_298645	chr3_101769578_+	SINE	Alu	AluSq2
CAediting_298646	chr3_101769590_+	SINE	Alu	AluSq2
CAediting_298647	chr3_101769592_+	SINE	Alu	AluSq2
CAediting_298648	chr3_101769612_+	SINE	Alu	AluSq2
CAediting_298649	chr3_101770047_+	SINE	Alu	AluSc
CAediting_298650	chr3_101770049_+	SINE	Alu	AluSc
CAediting_298651	chr3_101770051_+	SINE	Alu	AluSc
CAediting_298652	chr3_101770065_+	SINE	Alu	AluSc
CAediting_298653	chr3_101770068_+	SINE	Alu	AluSc
CAediting_298654	chr3_101770124_+	SINE	Alu	AluSc
CAediting_298655	chr3_101770125_+	SINE	Alu	AluSc
CAediting_298656	chr3_101770154_+	SINE	Alu	AluSc
CAediting_298657	chr3_101770158_+	SINE	Alu	AluSc
CAediting_298658	chr3_101770159_+	SINE	Alu	AluSc
CAediting_298659	chr3_101770164_+	SINE	Alu	AluSc
CAediting_298660	chr3_101770172_+	SINE	Alu	AluSc
CAediting_298661	chr3_101770177_+	SINE	Alu	AluSc
CAediting_298662	chr3_101770190_+	SINE	Alu	AluSc
CAediting_298663	chr3_101770205_+	SINE	Alu	AluSc
CAediting_298664	chr3_101770208_+	SINE	Alu	AluSc
CAediting_298665	chr3_101770210_+	SINE	Alu	AluSc
CAediting_298666	chr3_101770222_+	SINE	Alu	AluSc
CAediting_298667	chr3_101770234_+	SINE	Alu	AluSc
CAediting_298668	chr3_101770245_+	SINE	Alu	AluSc
CAediting_298669	chr3_101770266_+	SINE	Alu	AluSc
CAediting_298670	chr3_101770270_+	SINE	Alu	AluSc
CAediting_298671	chr3_101770283_+	SINE	Alu	AluSc
CAediting_298672	chr3_101770284_+	SINE	Alu	AluSc
CAediting_298673	chr3_101770297_+	SINE	Alu	AluSc
CAediting_298674	chr3_101770299_+	SINE	Alu	AluSc
CAediting_298675	chr3_101770306_+	SINE	Alu	AluSc
CAediting_298676	chr3_101770310_+	SINE	Alu	AluSc
CAediting_298677	chr3_101770315_+	SINE	Alu	AluSc

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RNA A-to-I editing events in the alternative splicing sites for CEP97

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000182504.9.CEP97.

Correlation between RNA A-to-I editing and PSI for ENSG00000182504.9.CEP97.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CEP97

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CEP97

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for CEP97

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_298613	chr3_101766955_+	ENSG00000182504.9	ENST00000341893	hsa-miR-520f-5p	101766950	101766957	8mer-1a	101766936	101766957	146.00	-11.29
CAediting_298613	chr3_101766955_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6873-3p	101766953	101766959	7mer-m8	101766938	101766960	141.00	-12.02
CAediting_298620	chr3_101768580_+	ENSG00000182504.9	ENST00000341893	hsa-miR-27a-3p	101768574	101768580	7mer-m8	101768561	101768581	155.00	-16.46
CAediting_298620	chr3_101768580_+	ENSG00000182504.9	ENST00000341893	hsa-miR-27b-3p	101768574	101768580	7mer-m8	101768561	101768581	151.00	-11.77
CAediting_298620	chr3_101768580_+	ENSG00000182504.9	ENST00000341893	hsa-miR-9985	101768574	101768580	7mer-m8	101768563	101768581	152.00	-14.82
CAediting_298621	chr3_101768581_+	ENSG00000182504.9	ENST00000341893	hsa-miR-139-5p	101768574	101768580	7mer-m8	101768560	101768581	147.00	-17.18
CAediting_298621	chr3_101768581_+	ENSG00000182504.9	ENST00000341893	hsa-miR-8052	101768579	101768585	7mer-1a	101768564	101768585	141.00	-17.64
CAediting_298627	chr3_101768621_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5699-5p	101768617	101768623	7mer-m8	101768603	101768624	140.00	-12.22
CAediting_298627	chr3_101768621_+	ENSG00000182504.9	ENST00000341893	hsa-miR-874-5p	101768618	101768625	8mer-1a	101768603	101768625	142.00	-18.86
CAediting_298632	chr3_101768654_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4659a-5p	101768650	101768657	8mer-1a	101768636	101768657	145.00	-13.55
CAediting_298632	chr3_101768654_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4659b-5p	101768650	101768657	8mer-1a	101768639	101768657	145.00	-14.11
CAediting_298632	chr3_101768654_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4716-5p	101768648	101768654	7mer-m8	101768633	101768655	146.00	-13.57
CAediting_298632	chr3_101768654_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4776-3p	101768651	101768657	7mer-m8	101768635	101768658	157.00	-23.38
CAediting_298632	chr3_101768654_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4776-3p	101768651	101768657	7mer-m8	101768635	101768658	157.00	-23.38
CAediting_298652	chr3_101770065_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1273c	101770060	101770065	6mer	101770045	101770066	147.00	-28.24
CAediting_298653	chr3_101770068_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3940-3p	101770065	101770071	7mer-m8	101770052	101770072	145.00	-22.20
CAediting_298653	chr3_101770068_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4783-3p	101770063	101770069	7mer-m8	101770048	101770070	169.00	-27.99
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1228-5p	101770263	101770269	7mer-m8	101770248	101770270	146.00	-23.47
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4486	101770264	101770270	7mer-m8	101770255	101770271	140.00	-17.83
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6771-5p	101770277	101770284	8mer-1a	101770260	101770284	155.00	-27.34
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3192-5p	101770277	101770284	8mer-1a	101770263	101770284	154.00	-25.84
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-326	101770279	101770285	7mer-m8	101770267	101770286	140.00	-14.43
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-330-5p	101770279	101770285	7mer-m8	101770265	101770286	140.00	-19.02
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4314	101770278	101770284	7mer-m8	101770268	101770285	144.00	-19.17
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-514a-5p	101770280	101770286	7mer-m8	101770267	101770287	156.00	-21.24
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-514a-5p	101770280	101770286	7mer-m8	101770267	101770287	156.00	-21.24
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-514a-5p	101770280	101770286	7mer-m8	101770267	101770287	156.00	-21.24
CAediting_298673	chr3_101770297_+	ENSG00000182504.9	ENST00000341893	hsa-miR-106a-3p	101770293	101770298	6mer	101770278	101770299	141.00	-21.13
CAediting_298675	chr3_101770306_+	ENSG00000182504.9	ENST00000341893	hsa-miR-662	101770301	101770306	6mer	101770285	101770307	153.00	-32.51
CAediting_298675	chr3_101770306_+	ENSG00000182504.9	ENST00000341893	hsa-miR-663b	101770304	101770310	7mer-m8	101770288	101770311	149.00	-28.29
CAediting_298616	chr3_101767027_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1199-5p	101767020	101767026	7mer-m8	101767008	101767027	149.00	-25.47
CAediting_298616	chr3_101767027_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3622a-3p	101767023	101767030	8mer-1a	101767009	101767030	143.00	-16.02
CAediting_298616	chr3_101767027_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3622b-3p	101767023	101767030	8mer-1a	101767010	101767030	151.00	-20.91
CAediting_298616	chr3_101767027_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6751-3p	101767020	101767026	7mer-m8	101767007	101767027	140.00	-12.55
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6746-5p	101767031	101767037	7mer-m8	101767017	101767038	140.00	-22.08
CAediting_298618	chr3_101768572_+	ENSG00000182504.9	ENST00000341893	hsa-miR-192-3p	101768568	101768574	7mer-1a	101768549	101768574	142.00	-22.34
CAediting_298618	chr3_101768572_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5189-3p	101768566	101768573	8mer-1a	101768554	101768573	155.00	-27.49
CAediting_298618	chr3_101768572_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6501-5p	101768569	101768575	7mer-m8	101768557	101768576	145.00	-19.23
CAediting_298622	chr3_101768586_+	ENSG00000182504.9	ENST00000341893	hsa-miR-181d-3p	101768582	101768588	7mer-m8	101768568	101768589	150.00	-22.00
CAediting_298623	chr3_101768597_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3943	101768594	101768600	7mer-m8	101768580	101768601	151.00	-25.31
CAediting_298624	chr3_101768603_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6849-3p	101768596	101768602	7mer-m8	101768582	101768603	140.00	-18.69
CAediting_298624	chr3_101768603_+	ENSG00000182504.9	ENST00000341893	hsa-miR-874-5p	101768600	101768607	8mer-1a	101768584	101768607	155.00	-28.96
CAediting_298630	chr3_101768635_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1200	101768631	101768636	6mer	101768619	101768637	143.00	-25.67
CAediting_298630	chr3_101768635_+	ENSG00000182504.9	ENST00000341893	hsa-miR-12113	101768628	101768634	7mer-m8	101768615	101768635	147.00	-19.16
CAediting_298630	chr3_101768635_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4539	101768628	101768634	7mer-m8	101768611	101768635	151.00	-18.60
CAediting_298634	chr3_101769382_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4537	101769379	101769386	8mer-1a	101769365	101769386	163.00	-25.09
CAediting_298636	chr3_101769413_+	ENSG00000182504.9	ENST00000341893	hsa-miR-486-5p	101769407	101769413	7mer-m8	101769393	101769414	148.00	-17.06
CAediting_298636	chr3_101769413_+	ENSG00000182504.9	ENST00000341893	hsa-miR-486-5p	101769407	101769413	7mer-m8	101769393	101769414	148.00	-17.06
CAediting_298639	chr3_101769469_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1233-3p	101769467	101769473	7mer-m8	101769455	101769474	154.00	-23.60
CAediting_298639	chr3_101769469_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1233-3p	101769467	101769473	7mer-m8	101769455	101769474	154.00	-23.60
CAediting_298639	chr3_101769469_+	ENSG00000182504.9	ENST00000341893	hsa-miR-146b-3p	101769464	101769470	7mer-m8	101769450	101769471	156.00	-26.76
CAediting_298639	chr3_101769469_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6779-3p	101769466	101769472	7mer-m8	101769453	101769473	145.00	-18.61
CAediting_298641	chr3_101769525_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3940-3p	101769522	101769528	7mer-m8	101769511	101769529	144.00	-24.53
CAediting_298642	chr3_101769537_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1289	101769535	101769541	7mer-m8	101769521	101769542	154.00	-21.53
CAediting_298642	chr3_101769537_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1289	101769535	101769541	7mer-m8	101769521	101769542	154.00	-21.53
CAediting_298643	chr3_101769538_+	ENSG00000182504.9	ENST00000341893	hsa-miR-28-5p	101769536	101769542	7mer-m8	101769523	101769543	151.00	-22.03
CAediting_298643	chr3_101769538_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3139	101769536	101769542	7mer-m8	101769521	101769543	165.00	-26.52
CAediting_298643	chr3_101769538_+	ENSG00000182504.9	ENST00000341893	hsa-miR-708-5p	101769536	101769542	7mer-m8	101769522	101769543	150.00	-22.21
CAediting_298645	chr3_101769578_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3200-3p	101769573	101769579	7mer-m8	101769559	101769580	159.00	-23.45
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4665-3p	101769610	101769616	7mer-m8	101769592	101769617	165.00	-38.64
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-150-5p	101770043	101770050	8mer-1a	101770029	101770050	140.00	-12.65
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4713-5p	101770044	101770050	7mer-m8	101770030	101770051	144.00	-14.00
CAediting_298650	chr3_101770049_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4469	101770045	101770051	7mer-m8	101770031	101770052	145.00	-15.35
CAediting_298651	chr3_101770051_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6892-3p	101770045	101770051	7mer-m8	101770032	101770052	140.00	-13.60
CAediting_298655	chr3_101770125_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3622a-3p	101770121	101770128	8mer-1a	101770107	101770128	148.00	-20.48
CAediting_298655	chr3_101770125_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3622b-3p	101770121	101770128	8mer-1a	101770108	101770128	153.00	-21.99
CAediting_298655	chr3_101770125_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4539	101770119	101770124	6mer	101770106	101770125	141.00	-19.05
CAediting_298657	chr3_101770158_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5690	101770151	101770158	8mer-1a	101770138	101770158	145.00	-17.09
CAediting_298657	chr3_101770158_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6787-3p	101770153	101770160	8mer-1a	101770139	101770160	151.00	-18.79
CAediting_298658	chr3_101770159_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4540	101770157	101770163	7mer-m8	101770143	101770164	152.00	-16.00
CAediting_298659	chr3_101770164_+	ENSG00000182504.9	ENST00000341893	hsa-miR-17-3p	101770160	101770166	7mer-m8	101770145	101770167	154.00	-19.26
CAediting_298661	chr3_101770177_+	ENSG00000182504.9	ENST00000341893	hsa-miR-10400-5p	101770172	101770179	8mer-1a	101770158	101770179	153.00	-24.86
CAediting_298661	chr3_101770177_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4467	101770172	101770179	8mer-1a	101770157	101770179	151.00	-23.44
CAediting_298661	chr3_101770177_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6770-3p	101770173	101770179	7mer-m8	101770159	101770180	162.00	-24.78
CAediting_298661	chr3_101770177_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6770-3p	101770173	101770179	7mer-m8	101770159	101770180	162.00	-24.78
CAediting_298661	chr3_101770177_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6770-3p	101770173	101770179	7mer-m8	101770159	101770180	162.00	-24.78
CAediting_298662	chr3_101770190_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1207-3p	101770183	101770190	8mer-1a	101770173	101770190	144.00	-14.68
CAediting_298662	chr3_101770190_+	ENSG00000182504.9	ENST00000341893	hsa-miR-34a-3p	101770186	101770192	7mer-m8	101770171	101770193	147.00	-10.17
CAediting_298635	chr3_101769410_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4327	101769408	101769414	7mer-m8	101769397	101769415	151.00	-16.74
CAediting_298635	chr3_101769410_+	ENSG00000182504.9	ENST00000341893	hsa-miR-500a-3p	101769406	101769412	7mer-1a	101769392	101769412	141.00	-19.90
CAediting_298635	chr3_101769410_+	ENSG00000182504.9	ENST00000341893	hsa-miR-500b-3p	101769403	101769409	7mer-m8	101769392	101769410	151.00	-22.76
CAediting_298644	chr3_101769577_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6068	101769570	101769577	8mer-1a	101769557	101769577	154.00	-28.70
CAediting_298646	chr3_101769590_+	ENSG00000182504.9	ENST00000341893	hsa-miR-106a-3p	101769586	101769591	6mer	101769571	101769592	145.00	-21.13
CAediting_298647	chr3_101769592_+	ENSG00000182504.9	ENST00000341893	hsa-miR-100-5p	101769588	101769594	7mer-m8	101769573	101769595	158.00	-19.20
CAediting_298647	chr3_101769592_+	ENSG00000182504.9	ENST00000341893	hsa-miR-99a-5p	101769588	101769594	7mer-m8	101769573	101769595	150.00	-17.77
CAediting_298647	chr3_101769592_+	ENSG00000182504.9	ENST00000341893	hsa-miR-99b-5p	101769588	101769594	7mer-m8	101769572	101769595	147.00	-24.16

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1233-5p	101767032	101767038	7mer-m8	101767015	101767039	151	-27.35
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1233-5p	101767032	101767038	7mer-m8	101767015	101767039	151	-27.35
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1285-3p	101769606	101769612	7mer-m8	101769595	101769613	143	-19.31
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1285-3p	101769606	101769612	7mer-m8	101769595	101769613	143	-19.31
CAediting_298623	chr3_101768597_+	ENSG00000182504.9	ENST00000341893	hsa-miR-150-5p	101768591	101768597	7mer-m8	101768575	101768598	143	-15.5
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-30b-3p	101770276	101770283	8mer-1a	101770262	101770283	144	-15.61
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-30c-1-3p	101767031	101767037	7mer-m8	101767017	101767038	141	-13.85
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-30c-2-3p	101767031	101767037	7mer-m8	101767017	101767038	145	-13.48
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3165	101770261	101770267	7mer-m8	101770246	101770268	148	-14.52
CAediting_298641	chr3_101769525_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3190-5p	101769519	101769525	7mer-m8	101769507	101769526	147	-18.34
CAediting_298667	chr3_101770234_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3190-5p	101770228	101770234	7mer-m8	101770216	101770235	147	-18.34
CAediting_298654	chr3_101770124_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3614-5p	101770122	101770128	7mer-1a	101770106	101770128	144	-17.8
CAediting_298655	chr3_101770125_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3614-5p	101770122	101770128	7mer-1a	101770106	101770128	144	-17.8
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3616-5p	101767036	101767042	7mer-m8	101767022	101767043	140	-11.22
CAediting_298640	chr3_101769499_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3675-3p	101769497	101769503	7mer-m8	101769483	101769504	145	-12.58
CAediting_298664	chr3_101770208_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3675-3p	101770206	101770212	7mer-m8	101770192	101770213	145	-12.58
CAediting_298665	chr3_101770210_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3675-3p	101770206	101770212	7mer-m8	101770192	101770213	145	-12.58
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3689a-3p	101770276	101770283	8mer-1a	101770262	101770283	148	-20.52
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3689b-3p	101770276	101770283	8mer-1a	101770262	101770283	148	-20.57
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-3689c	101770276	101770283	8mer-1a	101770262	101770283	148	-20.57
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-371b-5p	101770041	101770048	8mer-1a	101770027	101770048	149	-9.63
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-373-5p	101770041	101770048	8mer-1a	101770027	101770048	146	-10.14
CAediting_298675	chr3_101770306_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4284	101770302	101770309	8mer-1a	101770292	101770309	143	-15.61
CAediting_298633	chr3_101768657_+	ENSG00000182504.9	ENST00000341893	hsa-miR-431-5p	101768654	101768660	7mer-m8	101768640	101768661	147	-12.85
CAediting_298639	chr3_101769469_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4312	101769465	101769471	7mer-m8	101769454	101769472	144	-14.29
CAediting_298634	chr3_101769382_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4329	101769376	101769382	7mer-m8	101769365	101769383	145	-14.79
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4505	101769608	101769614	7mer-m8	101769598	101769615	145	-20.61
CAediting_298644	chr3_101769577_+	ENSG00000182504.9	ENST00000341893	hsa-miR-450a-5p	101769571	101769577	7mer-m8	101769557	101769578	143	-10.27
CAediting_298645	chr3_101769578_+	ENSG00000182504.9	ENST00000341893	hsa-miR-450a-5p	101769571	101769577	7mer-m8	101769557	101769578	143	-10.27
CAediting_298644	chr3_101769577_+	ENSG00000182504.9	ENST00000341893	hsa-miR-450a-5p	101769571	101769577	7mer-m8	101769557	101769578	143	-10.27
CAediting_298645	chr3_101769578_+	ENSG00000182504.9	ENST00000341893	hsa-miR-450a-5p	101769571	101769577	7mer-m8	101769557	101769578	143	-10.27
CAediting_298637	chr3_101769430_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4649-3p	101769424	101769430	7mer-m8	101769411	101769431	140	-14.11
CAediting_298664	chr3_101770208_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4684-5p	101770205	101770211	7mer-m8	101770191	101770212	151	-11.86
CAediting_298665	chr3_101770210_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4684-5p	101770205	101770211	7mer-m8	101770191	101770212	151	-11.86
CAediting_298613	chr3_101766955_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4753-3p	101766953	101766959	7mer-m8	101766939	101766960	140	-8.21
CAediting_298614	chr3_101766956_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4753-3p	101766953	101766959	7mer-m8	101766939	101766960	140	-8.21
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4795-5p	101767035	101767042	8mer-1a	101767022	101767042	146	-11.86
CAediting_298621	chr3_101768581_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5089-5p	101768579	101768585	7mer-m8	101768567	101768586	147	-11.42
CAediting_298622	chr3_101768586_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5089-5p	101768579	101768585	7mer-m8	101768567	101768586	147	-11.42
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-514b-5p	101770043	101770048	6mer	101770028	101770049	150	-17.76
CAediting_298650	chr3_101770049_+	ENSG00000182504.9	ENST00000341893	hsa-miR-514b-5p	101770043	101770048	6mer	101770028	101770049	150	-17.76
CAediting_298668	chr3_101770245_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5186	101770243	101770249	7mer-m8	101770230	101770250	147	-17.69
CAediting_298641	chr3_101769525_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548s	101769518	101769524	7mer-m8	101769504	101769525	143	-12.53
CAediting_298667	chr3_101770234_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548s	101770227	101770233	7mer-m8	101770213	101770234	143	-12.53
CAediting_298660	chr3_101770172_+	ENSG00000182504.9	ENST00000341893	hsa-miR-550b-2-5p	101770165	101770171	7mer-m8	101770151	101770172	149	-17.24
CAediting_298660	chr3_101770172_+	ENSG00000182504.9	ENST00000341893	hsa-miR-550b-2-5p	101770165	101770171	7mer-m8	101770151	101770172	149	-17.24
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-573	101767036	101767042	7mer-m8	101767019	101767043	153	-17.36
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-5787	101769608	101769614	7mer-m8	101769597	101769615	150	-26.27
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-612	101769606	101769612	7mer-m8	101769590	101769613	149	-25.9
CAediting_298631	chr3_101768637_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6131	101768635	101768641	7mer-m8	101768624	101768642	140	-17.94
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-616-5p	101770041	101770048	8mer-1a	101770027	101770048	140	-5.71
CAediting_298620	chr3_101768580_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6504-3p	101768575	101768581	7mer-m8	101768561	101768582	149	-15.98
CAediting_298621	chr3_101768581_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6504-3p	101768575	101768581	7mer-m8	101768561	101768582	149	-15.98
CAediting_298622	chr3_101768586_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6506-5p	101768580	101768586	7mer-m8	101768565	101768587	146	-15.63
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6745	101770262	101770269	8mer-1a	101770247	101770269	154	-23.85
CAediting_298618	chr3_101768572_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6755-3p	101768569	101768575	7mer-m8	101768555	101768576	140	-12.78
CAediting_298619	chr3_101768574_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6755-3p	101768569	101768575	7mer-m8	101768555	101768576	140	-12.78
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6756-5p	101770263	101770269	7mer-1a	101770247	101770269	149	-26.13
CAediting_298625	chr3_101768608_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6764-3p	101768605	101768610	6mer	101768591	101768611	140	-24.45
CAediting_298669	chr3_101770266_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6776-5p	101770264	101770270	7mer-m8	101770253	101770271	149	-22.43
CAediting_298670	chr3_101770270_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6776-5p	101770264	101770270	7mer-m8	101770253	101770271	149	-22.43
CAediting_298623	chr3_101768597_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6778-3p	101768593	101768599	7mer-m8	101768579	101768600	150	-16.85
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6779-5p	101770276	101770283	8mer-1a	101770260	101770283	155	-26.92
CAediting_298625	chr3_101768608_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6780a-3p	101768606	101768612	7mer-m8	101768591	101768613	154	-22.57
CAediting_298617	chr3_101767038_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6788-5p	101767031	101767037	7mer-m8	101767018	101767038	145	-13.21
CAediting_298625	chr3_101768608_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6824-3p	101768605	101768610	6mer	101768590	101768611	153	-31.57
CAediting_298648	chr3_101769612_+	ENSG00000182504.9	ENST00000341893	hsa-miR-6860	101769606	101769612	7mer-m8	101769595	101769613	146	-19.8
CAediting_298649	chr3_101770047_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7110-3p	101770045	101770051	7mer-m8	101770031	101770052	140	-11.46
CAediting_298650	chr3_101770049_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7110-3p	101770045	101770051	7mer-m8	101770031	101770052	140	-11.46
CAediting_298651	chr3_101770051_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7110-3p	101770045	101770051	7mer-m8	101770031	101770052	140	-11.46
CAediting_298615	chr3_101766997_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7158-3p	101766995	101767001	7mer-m8	101766982	101767002	151	-16.01
CAediting_298634	chr3_101769382_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7160-5p	101769378	101769383	6mer	101769365	101769384	145	-23.86
CAediting_298637	chr3_101769430_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7160-5p	101769425	101769431	7mer-m8	101769412	101769432	146	-20.9
CAediting_298666	chr3_101770222_+	ENSG00000182504.9	ENST00000341893	hsa-miR-7855-5p	101770219	101770224	6mer	101770206	101770225	148	-26.03
CAediting_298626	chr3_101768616_+	ENSG00000182504.9	ENST00000341893	hsa-miR-8079	101768611	101768617	7mer-m8	101768599	101768618	153	-17.5
CAediting_298671	chr3_101770283_+	ENSG00000182504.9	ENST00000341893	hsa-miR-887-5p	101770277	101770284	8mer-1a	101770264	101770284	147	-16.84
CAediting_298672	chr3_101770284_+	ENSG00000182504.9	ENST00000341893	hsa-miR-887-5p	101770277	101770284	8mer-1a	101770264	101770284	147	-16.84

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000182504.9	ENST00000467655	hsa-miR-4477b	101765019	101765025	7mer-m8	101765005	101765026	145	-9.97
CAediting_1229413	chr17_67471544_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548aa	101766750	101766756	7mer-m8	101766734	101766757	155	-11.47
CAediting_1229413	chr17_67471544_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548aa	101768509	101768516	8mer-1a	101768492	101768516	148	-10.4
CAediting_1229414	chr17_67471546_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548aa	101768025	101768031	7mer-m8	101768001	101768032	152	-14.34
CAediting_1160181	chr17_7017644_-	ENSG00000182504.9	ENST00000341893	hsa-miR-195-3p	101767295	101767302	8mer-1a	101767281	101767302	151	-10.98
CAediting_1160181	chr17_7017644_-	ENSG00000182504.9	ENST00000341893	hsa-miR-195-3p	101769204	101769211	8mer-1a	101769190	101769211	141	-9.81
CAediting_1368054	chr19_46709310_-	ENSG00000182504.9	ENST00000341893	hsa-miR-320e	101767084	101767091	8mer-1a	101767074	101767091	146	-18.98
CAediting_1368054	chr19_46709310_-	ENSG00000182504.9	ENST00000341893	hsa-miR-320e	101769657	101769663	7mer-m8	101769646	101769664	155	-19.18
CAediting_86358	chr1_109598906_+	ENSG00000182504.9	ENST00000341893	hsa-miR-197-5p	101769555	101769562	8mer-1a	101769534	101769562	146	-26.62
CAediting_86358	chr1_109598906_+	ENSG00000182504.9	ENST00000341893	hsa-miR-197-5p	101770262	101770269	8mer-1a	101770244	101770269	154	-26.39
CAediting_117844	chr1_162342605_+	ENSG00000182504.9	ENST00000341893	hsa-miR-556-3p	101766792	101766798	7mer-m8	101766779	101766799	153	-12.59
CAediting_77128	chr1_85133844_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4423-3p	101769605	101769611	7mer-m8	101769592	101769612	140	-13.86
CAediting_396018	chr5_1062918_-	ENSG00000182504.9	ENST00000341893	hsa-miR-4635	101769545	101769551	7mer-m8	101769532	101769552	162	-22.6
CAediting_1399425	chr20_1392958_-	ENSG00000182504.9	ENST00000465011	hsa-miR-6869-5p	101731893	101731899	7mer-m8	101731878	101731900	146	-19.75
CAediting_396018	chr5_1062918_-	ENSG00000182504.9	ENST00000467655	hsa-miR-4635	101758340	101758346	7mer-m8	101758327	101758347	140	-12.48
CAediting_396018	chr5_1062918_-	ENSG00000182504.9	ENST00000467655	hsa-miR-4635	101765020	101765027	8mer-1a	101765007	101765027	140	-17.24
CAediting_468389	chr6_31355314_-	ENSG00000182504.9	ENST00000467655	hsa-miR-6891-5p	101763168	101763175	8mer-1a	101763156	101763175	148	-22.9

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_442554	chr5_154685830_+	ENSG00000182504.9	ENST00000341893	hsa-miR-1303	101766807	101766814	8mer-1a	101766790	101766814	155	-15.44
CAediting_1160181	chr17_7017644_-	ENSG00000182504.9	ENST00000341893	hsa-miR-195-3p	101766693	101766699	7mer-m8	101766679	101766700	140	-4.68
CAediting_393	chr1_1167164_+	ENSG00000182504.9	ENST00000341893	hsa-miR-200b-3p	101767532	101767539	8mer-1a	101767518	101767539	148	-11.94
CAediting_688080	chr9_63819626_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4477b	101767804	101767810	7mer-m8	101767791	101767811	145	-6.34
CAediting_688081	chr9_63819627_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4477b	101767804	101767810	7mer-m8	101767791	101767811	145	-6.34
CAediting_396018	chr5_1062918_-	ENSG00000182504.9	ENST00000341893	hsa-miR-4635	101766896	101766902	7mer-m8	101766881	101766903	152	-16.13
CAediting_414656	chr5_72878640_+	ENSG00000182504.9	ENST00000341893	hsa-miR-4804-3p	101768010	101768016	7mer-m8	101767997	101768017	149	-10.5
CAediting_1229413	chr17_67471544_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548aa	101767943	101767950	8mer-1a	101767928	101767950	154	-6.62
CAediting_1229414	chr17_67471546_+	ENSG00000182504.9	ENST00000341893	hsa-miR-548aa	101767943	101767950	8mer-1a	101767928	101767950	154	-6.62
CAediting_1351755	chr19_40282625_-	ENSG00000182504.9	ENST00000341893	hsa-miR-641	101767376	101767382	7mer-m8	101767359	101767383	149	-13.8
CAediting_468389	chr6_31355314_-	ENSG00000182504.9	ENST00000341893	hsa-miR-6891-5p	101766063	101766069	7mer-m8	101766053	101766070	155	-21.61

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CEP97

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000341893.6	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_298613	ENST00000341893.6	chr3_101766955_+	-2190.50	-2189.60	-2239.30
CAediting_298614	ENST00000341893.6	chr3_101766956_+	-2194.60	-2189.60	-2239.30
CAediting_298615	ENST00000341893.6	chr3_101766997_+	-2190.90	-2189.60	-2239.30
CAediting_298616	ENST00000341893.6	chr3_101767027_+	-2189.30	-2189.60	-2239.30
CAediting_298617	ENST00000341893.6	chr3_101767038_+	-2189.20	-2189.60	-2239.30
CAediting_298618	ENST00000341893.6	chr3_101768572_+	-2189.90	-2189.60	-2239.30
CAediting_298619	ENST00000341893.6	chr3_101768574_+	-2189.00	-2189.60	-2239.30
CAediting_298620	ENST00000341893.6	chr3_101768580_+	-2189.70	-2189.60	-2239.30
CAediting_298621	ENST00000341893.6	chr3_101768581_+	-2189.60	-2189.60	-2239.30
CAediting_298622	ENST00000341893.6	chr3_101768586_+	-2188.90	-2189.60	-2239.30
CAediting_298623	ENST00000341893.6	chr3_101768597_+	-2188.70	-2189.60	-2239.30
CAediting_298624	ENST00000341893.6	chr3_101768603_+	-2188.70	-2189.60	-2239.30
CAediting_298625	ENST00000341893.6	chr3_101768608_+	-2193.20	-2189.60	-2239.30
CAediting_298626	ENST00000341893.6	chr3_101768616_+	-2189.20	-2189.60	-2239.30
CAediting_298627	ENST00000341893.6	chr3_101768621_+	-2188.70	-2189.60	-2239.30
CAediting_298628	ENST00000341893.6	chr3_101768626_+	-2188.90	-2189.60	-2239.30
CAediting_298629	ENST00000341893.6	chr3_101768634_+	-2195.60	-2189.60	-2239.30
CAediting_298630	ENST00000341893.6	chr3_101768635_+	-2189.50	-2189.60	-2239.30
CAediting_298631	ENST00000341893.6	chr3_101768637_+	-2189.00	-2189.60	-2239.30
CAediting_298632	ENST00000341893.6	chr3_101768654_+	-2196.20	-2189.60	-2239.30
CAediting_298633	ENST00000341893.6	chr3_101768657_+	-2193.80	-2189.60	-2239.30
CAediting_298634	ENST00000341893.6	chr3_101769382_+	-2190.40	-2189.60	-2239.30
CAediting_298635	ENST00000341893.6	chr3_101769410_+	-2191.60	-2189.60	-2239.30
CAediting_298636	ENST00000341893.6	chr3_101769413_+	-2189.80	-2189.60	-2239.30
CAediting_298637	ENST00000341893.6	chr3_101769430_+	-2188.90	-2189.60	-2239.30
CAediting_298638	ENST00000341893.6	chr3_101769462_+	-2189.60	-2189.60	-2239.30
CAediting_298639	ENST00000341893.6	chr3_101769469_+	-2189.60	-2189.60	-2239.30
CAediting_298640	ENST00000341893.6	chr3_101769499_+	-2189.30	-2189.60	-2239.30
CAediting_298641	ENST00000341893.6	chr3_101769525_+	-2188.90	-2189.60	-2239.30
CAediting_298642	ENST00000341893.6	chr3_101769537_+	-2189.10	-2189.60	-2239.30
CAediting_298643	ENST00000341893.6	chr3_101769538_+	-2189.60	-2189.60	-2239.30
CAediting_298644	ENST00000341893.6	chr3_101769577_+	-2189.70	-2189.60	-2239.30
CAediting_298645	ENST00000341893.6	chr3_101769578_+	-2189.30	-2189.60	-2239.30
CAediting_298646	ENST00000341893.6	chr3_101769590_+	-2189.60	-2189.60	-2239.30
CAediting_298647	ENST00000341893.6	chr3_101769592_+	-2188.90	-2189.60	-2239.30
CAediting_298648	ENST00000341893.6	chr3_101769612_+	-2191.20	-2189.60	-2239.30
CAediting_298649	ENST00000341893.6	chr3_101770047_+	-2192.70	-2189.60	-2239.30
CAediting_298650	ENST00000341893.6	chr3_101770049_+	-2191.80	-2189.60	-2239.30
CAediting_298651	ENST00000341893.6	chr3_101770051_+	-2188.70	-2189.60	-2239.30
CAediting_298652	ENST00000341893.6	chr3_101770065_+	-2188.90	-2189.60	-2239.30
CAediting_298653	ENST00000341893.6	chr3_101770068_+	-2188.80	-2189.60	-2239.30
CAediting_298654	ENST00000341893.6	chr3_101770124_+	-2190.50	-2189.60	-2239.30
CAediting_298655	ENST00000341893.6	chr3_101770125_+	-2193.00	-2189.60	-2239.30
CAediting_298656	ENST00000341893.6	chr3_101770154_+	-2189.30	-2189.60	-2239.30
CAediting_298657	ENST00000341893.6	chr3_101770158_+	-2192.90	-2189.60	-2239.30
CAediting_298658	ENST00000341893.6	chr3_101770159_+	-2193.20	-2189.60	-2239.30
CAediting_298659	ENST00000341893.6	chr3_101770164_+	-2191.00	-2189.60	-2239.30
CAediting_298660	ENST00000341893.6	chr3_101770172_+	-2190.70	-2189.60	-2239.30
CAediting_298661	ENST00000341893.6	chr3_101770177_+	-2190.20	-2189.60	-2239.30
CAediting_298662	ENST00000341893.6	chr3_101770190_+	-2189.70	-2189.60	-2239.30
CAediting_298663	ENST00000341893.6	chr3_101770205_+	-2192.60	-2189.60	-2239.30
CAediting_298664	ENST00000341893.6	chr3_101770208_+	-2192.20	-2189.60	-2239.30
CAediting_298665	ENST00000341893.6	chr3_101770210_+	-2193.20	-2189.60	-2239.30
CAediting_298666	ENST00000341893.6	chr3_101770222_+	-2189.60	-2189.60	-2239.30
CAediting_298667	ENST00000341893.6	chr3_101770234_+	-2188.90	-2189.60	-2239.30
CAediting_298668	ENST00000341893.6	chr3_101770245_+	-2189.70	-2189.60	-2239.30
CAediting_298669	ENST00000341893.6	chr3_101770266_+	-2189.80	-2189.60	-2239.30
CAediting_298670	ENST00000341893.6	chr3_101770270_+	-2188.90	-2189.60	-2239.30
CAediting_298671	ENST00000341893.6	chr3_101770283_+	-2189.30	-2189.60	-2239.30
CAediting_298672	ENST00000341893.6	chr3_101770284_+	-2189.70	-2189.60	-2239.30
CAediting_298673	ENST00000341893.6	chr3_101770297_+	-2188.60	-2189.60	-2239.30
CAediting_298674	ENST00000341893.6	chr3_101770299_+	-2191.90	-2189.60	-2239.30
CAediting_298675	ENST00000341893.6	chr3_101770306_+	-2189.60	-2189.60	-2239.30
CAediting_298676	ENST00000341893.6	chr3_101770310_+	-2188.90	-2189.60	-2239.30
CAediting_298677	ENST00000341893.6	chr3_101770315_+	-2189.90	-2189.60	-2239.30

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Relation with ADAR for CEP97

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_298613	chr3_101766955_+	.	.	0.000238322941209194	0.237524558882469	.	.
BRCA	CAediting_298613	chr3_101766955_+	0.00414981779775465	0.168436721382382	0.00400723544553851	0.169076578469632	.	.
LGG	CAediting_298614	chr3_101766956_+	.	.	0.029929489396962	0.21509137674666	.	.
BRCA	CAediting_298614	chr3_101766956_+	.	.	0.0126652936801818	0.200484674262936	.	.
BLCA	CAediting_298619	chr3_101768574_+	0.039666066695201	0.189677828459561	.	.	.	.
BRCA	CAediting_298619	chr3_101768574_+	0.0211998009296779	0.0876536901637893	.	.	.	.
CESC	CAediting_298619	chr3_101768574_+	.	.	0.0375039172088291	0.161615841122013	.	.
LUAD	CAediting_298619	chr3_101768574_+	0.00708829096879066	0.236014438902223	.	.	.	.
PCPG	CAediting_298619	chr3_101768574_+	.	.	0.0322593702822679	0.214318099813893	.	.
TGCT	CAediting_298619	chr3_101768574_+	0.00600001423162254	0.302812168606606	.	.	.	.
LGG	CAediting_298620	chr3_101768580_+	.	.	0.00331380021448947	0.14706636951154	.	.
BRCA	CAediting_298620	chr3_101768580_+	3.42055031318288e-06	0.209068977903249	.	.	.	.
LUSC	CAediting_298620	chr3_101768580_+	0.0382978574673998	0.177213553001117	.	.	.	.
SKCM	CAediting_298620	chr3_101768580_+	0.00226519230540821	0.25601174007356	.	.	.	.
SARC	CAediting_298620	chr3_101768580_+	.	.	0.0268806174744724	0.276683793285828	.	.
SKCM	CAediting_298621	chr3_101768581_+	.	.	.	.	0.0227685596540813	0.280032262195852
BRCA	CAediting_298632	chr3_101768654_+	0.0499987076209547	0.193653169868536	.	.	.	.
BLCA	CAediting_298673	chr3_101770297_+	0.00444482206555258	0.246122784918572	.	.	.	.
LGG	CAediting_298673	chr3_101770297_+	.	.	3.54000064733778e-07	0.293671338936789	.	.
BRCA	CAediting_298673	chr3_101770297_+	6.41925018130022e-12	0.274930375954088	.	.	.	.
GBM	CAediting_298673	chr3_101770297_+	0.00789207135794745	0.281474434804273	.	.	.	.
HNSC	CAediting_298673	chr3_101770297_+	0.00948652594573566	0.226728199210891	.	.	.	.
STAD	CAediting_298673	chr3_101770297_+	.	.	0.0237739019436834	0.212601116904868	.	.
THCA	CAediting_298673	chr3_101770297_+	0.0121738125873735	0.166524855444242	.	.	.	.
KIRC	CAediting_298673	chr3_101770297_+	0.00186124527596294	0.188534968536975	.	.	.	.
UCEC	CAediting_298673	chr3_101770297_+	.	.	0.000445803651052418	0.297014812345615	.	.
PCPG	CAediting_298673	chr3_101770297_+	9.65674711830755e-05	0.334025958237272	0.0172000320195686	0.207864864787599	.	.
SARC	CAediting_298673	chr3_101770297_+	.	.	0.00159721890524567	0.281694056616262	0.049976217584527	0.177150624646046
TGCT	CAediting_298673	chr3_101770297_+	0.00717185499881596	0.300279827325701	.	.	.	.

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Relation with cancer stages for CEP97

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
HNSC	pathologic_stage	CAediting_298619	chr3_101768574_+	9.19553730211075e-05	0.289684984610523
KIRP	clinical_stage	CAediting_298619	chr3_101768574_+	0.0101369410856956	0.367700697672704
KIRP	pathologic_stage	CAediting_298619	chr3_101768574_+	0.00576385189709425	0.331435759903426
LIHC	pathologic_stage	CAediting_298673	chr3_101770297_+	0.00494352876819988	-0.295428185315218
TGCT	pathologic_stage	CAediting_298619	chr3_101768574_+	0.0457523530651163	-0.30630158097561

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Relation with survival for CEP97

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
STAD	CAediting_298621	chr3_101768581_+	0.0100702275742919	0.000832512	1687.64
KIRC	CAediting_298619	chr3_101768574_+	0.0141490731508889	0.0219702	0.0700101
KIRP	CAediting_298619	chr3_101768574_+	0.00197215801225703	0.0124712	659638
KIRP	CAediting_298673	chr3_101770297_+	0.0216612559824971	0.0154722	6517.83
SKCM	CAediting_298620	chr3_101768580_+	0.0135257096272441	0.0290027	74.2811

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RelatedDrugs for CEP97

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for CEP97

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene