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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: TRPM8 (CAeditome ID:79054) |
Gene summary for TRPM8 |
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Gene information | Gene symbol | TRPM8 | Gene ID | 79054 |
Gene name | transient receptor potential cation channel subfamily M member 8 | |
Synonyms | LTRPC6|LTrpC-6|TRPP8|trp-p8 | |
Cytomap | 2q37.1 | |
Type of gene | protein-coding | |
Description | transient receptor potential cation channel subfamily M member 8TRPM8 cationic channeltransient receptor potential p8transient receptor potential subfamily M member 8 | |
Modification date | 20210518 | |
UniProtAcc | Q7Z2W7 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
TRPM8 | GO:0005886 | Transient receptor potential cation channel subfamily M member 8 | 25559186 |
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RNA A-to-I events for TRPM8 |
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CAediting_249947(233980558, +), CAediting_249948(233980630, +), CAediting_249949(233980954, +), CAediting_249950(233997009, +), CAediting_249951(233997016, +), CAediting_249952(233997032, +), CAediting_249953(233997079, +), CAediting_249954(233997103, +), CAediting_249955(233997104, +), CAediting_249956(233997108, +), CAediting_249957(233997111, +), CAediting_249958(233997113, +), CAediting_249959(233997114, +), CAediting_249960(233997115, +), CAediting_249961(233997116, +), CAediting_249962(233997119, +), CAediting_249963(233997159, +), CAediting_249964(233997163, +), CAediting_249965(233997199, +), CAediting_249966(234000371, +), CAediting_249967(234000383, +), CAediting_249968(234000699, +), CAediting_249969(234000722, +), CAediting_249970(234000773, +), CAediting_249971(234000779, +), CAediting_249972(234000782, +), CAediting_249973(234000796, +), CAediting_249974(234000820, +), CAediting_249975(234000853, +), CAediting_249976(234000913, +), CAediting_249977(234000925, +), CAediting_249978(234011663, +), CAediting_249979(234011699, +), CAediting_249980(234011702, +), CAediting_249981(234011752, +), CAediting_249982(234011755, +), CAediting_249983(234011756, +), CAediting_249984(234011757, +), CAediting_249985(234011758, +), CAediting_249986(234011759, +), CAediting_249987(234011761, +), CAediting_249988(234011767, +), CAediting_249989(234011818, +), CAediting_249990(234012313, +), CAediting_249991(234012314, +), CAediting_249992(234012407, +), CAediting_249993(234012408, +), CAediting_249994(234012414, +), CAediting_249995(234012420, +), |
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RNA editing positional annotations for TRPM8 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_249947 | chr2_233980558_+ | ncRNA_intronic |
CAediting_249948 | chr2_233980630_+ | ncRNA_intronic |
CAediting_249949 | chr2_233980954_+ | ncRNA_intronic |
CAediting_249950 | chr2_233997009_+ | intronic |
CAediting_249951 | chr2_233997016_+ | intronic |
CAediting_249952 | chr2_233997032_+ | intronic |
CAediting_249953 | chr2_233997079_+ | intronic |
CAediting_249954 | chr2_233997103_+ | intronic |
CAediting_249955 | chr2_233997104_+ | intronic |
CAediting_249956 | chr2_233997108_+ | intronic |
CAediting_249957 | chr2_233997111_+ | intronic |
CAediting_249958 | chr2_233997113_+ | intronic |
CAediting_249959 | chr2_233997114_+ | intronic |
CAediting_249960 | chr2_233997115_+ | intronic |
CAediting_249961 | chr2_233997116_+ | intronic |
CAediting_249962 | chr2_233997119_+ | intronic |
CAediting_249963 | chr2_233997159_+ | intronic |
CAediting_249964 | chr2_233997163_+ | intronic |
CAediting_249965 | chr2_233997199_+ | intronic |
CAediting_249966 | chr2_234000371_+ | intronic |
CAediting_249967 | chr2_234000383_+ | intronic |
CAediting_249968 | chr2_234000699_+ | intronic |
CAediting_249969 | chr2_234000722_+ | intronic |
CAediting_249970 | chr2_234000773_+ | intronic |
CAediting_249971 | chr2_234000779_+ | intronic |
CAediting_249972 | chr2_234000782_+ | intronic |
CAediting_249973 | chr2_234000796_+ | intronic |
CAediting_249974 | chr2_234000820_+ | intronic |
CAediting_249975 | chr2_234000853_+ | intronic |
CAediting_249976 | chr2_234000913_+ | intronic |
CAediting_249977 | chr2_234000925_+ | intronic |
CAediting_249978 | chr2_234011663_+ | intronic |
CAediting_249979 | chr2_234011699_+ | intronic |
CAediting_249980 | chr2_234011702_+ | intronic |
CAediting_249981 | chr2_234011752_+ | intronic |
CAediting_249982 | chr2_234011755_+ | intronic |
CAediting_249983 | chr2_234011756_+ | intronic |
CAediting_249984 | chr2_234011757_+ | intronic |
CAediting_249985 | chr2_234011758_+ | intronic |
CAediting_249986 | chr2_234011759_+ | intronic |
CAediting_249987 | chr2_234011761_+ | intronic |
CAediting_249988 | chr2_234011767_+ | intronic |
CAediting_249989 | chr2_234011818_+ | intronic |
CAediting_249990 | chr2_234012313_+ | intronic |
CAediting_249991 | chr2_234012314_+ | intronic |
CAediting_249992 | chr2_234012407_+ | intronic |
CAediting_249993 | chr2_234012408_+ | intronic |
CAediting_249994 | chr2_234012414_+ | intronic |
CAediting_249995 | chr2_234012420_+ | intronic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_249947 | chr2_233980558_+ | SINE | Alu | AluJb |
CAediting_249948 | chr2_233980630_+ | SINE | Alu | AluJb |
CAediting_249949 | chr2_233980954_+ | SINE | Alu | AluJo |
CAediting_249950 | chr2_233997009_+ | SINE | Alu | AluSx |
CAediting_249951 | chr2_233997016_+ | SINE | Alu | AluSx |
CAediting_249952 | chr2_233997032_+ | SINE | Alu | AluSx |
CAediting_249953 | chr2_233997079_+ | SINE | Alu | AluSx |
CAediting_249954 | chr2_233997103_+ | SINE | Alu | AluSx |
CAediting_249955 | chr2_233997104_+ | SINE | Alu | AluSx |
CAediting_249956 | chr2_233997108_+ | SINE | Alu | AluSx |
CAediting_249957 | chr2_233997111_+ | SINE | Alu | AluSx |
CAediting_249958 | chr2_233997113_+ | SINE | Alu | AluSx |
CAediting_249959 | chr2_233997114_+ | SINE | Alu | AluSx |
CAediting_249960 | chr2_233997115_+ | SINE | Alu | AluSx |
CAediting_249961 | chr2_233997116_+ | SINE | Alu | AluSx |
CAediting_249962 | chr2_233997119_+ | SINE | Alu | AluSx |
CAediting_249963 | chr2_233997159_+ | SINE | Alu | AluSx |
CAediting_249964 | chr2_233997163_+ | SINE | Alu | AluSx |
CAediting_249965 | chr2_233997199_+ | SINE | Alu | AluSx |
CAediting_249966 | chr2_234000371_+ | SINE | Alu | AluSg |
CAediting_249967 | chr2_234000383_+ | SINE | Alu | AluSg |
CAediting_249968 | chr2_234000699_+ | SINE | Alu | AluSz |
CAediting_249969 | chr2_234000722_+ | SINE | Alu | AluSz |
CAediting_249970 | chr2_234000773_+ | SINE | Alu | AluSz |
CAediting_249971 | chr2_234000779_+ | SINE | Alu | AluSz |
CAediting_249972 | chr2_234000782_+ | SINE | Alu | AluSz |
CAediting_249973 | chr2_234000796_+ | SINE | Alu | AluSz |
CAediting_249974 | chr2_234000820_+ | SINE | Alu | AluSz |
CAediting_249975 | chr2_234000853_+ | SINE | Alu | AluSz |
CAediting_249976 | chr2_234000913_+ | SINE | Alu | AluSz |
CAediting_249977 | chr2_234000925_+ | SINE | Alu | AluSz |
CAediting_249978 | chr2_234011663_+ | SINE | Alu | AluY |
CAediting_249979 | chr2_234011699_+ | SINE | Alu | AluY |
CAediting_249980 | chr2_234011702_+ | SINE | Alu | AluY |
CAediting_249981 | chr2_234011752_+ | SINE | Alu | AluY |
CAediting_249982 | chr2_234011755_+ | SINE | Alu | AluY |
CAediting_249983 | chr2_234011756_+ | SINE | Alu | AluY |
CAediting_249984 | chr2_234011757_+ | SINE | Alu | AluY |
CAediting_249985 | chr2_234011758_+ | SINE | Alu | AluY |
CAediting_249986 | chr2_234011759_+ | SINE | Alu | AluY |
CAediting_249987 | chr2_234011761_+ | SINE | Alu | AluY |
CAediting_249988 | chr2_234011767_+ | SINE | Alu | AluY |
CAediting_249989 | chr2_234011818_+ | SINE | Alu | AluY |
CAediting_249990 | chr2_234012313_+ | SINE | Alu | AluSg |
CAediting_249991 | chr2_234012314_+ | SINE | Alu | AluSg |
CAediting_249992 | chr2_234012407_+ | SINE | Alu | AluSg |
CAediting_249993 | chr2_234012408_+ | SINE | Alu | AluSg |
CAediting_249994 | chr2_234012414_+ | SINE | Alu | AluSg |
CAediting_249995 | chr2_234012420_+ | SINE | Alu | AluSg |
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RNA A-to-I editing events in the alternative splicing sites for TRPM8 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRPM8 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for TRPM8 |
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The effects of the RNA editing to the miRNA binding sites for TRPM8 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_748296 | chr10_51299626_+ | ENSG00000144481.15 | ENST00000444298 | hsa-miR-605-3p | 233960966 | 233960972 | 7mer-m8 | 233960949 | 233960973 | 153 | -15.78 |
CAediting_393 | chr1_1167164_+ | ENSG00000144481.15 | ENST00000444298 | hsa-miR-200b-3p | 233966725 | 233966731 | 7mer-m8 | 233966710 | 233966732 | 143 | -12.41 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000324695 | hsa-miR-548aa | 234017430 | 234017437 | 8mer-1a | 234017411 | 234017437 | 157 | -13.6 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000324695 | hsa-miR-641 | 234017510 | 234017516 | 7mer-1a | 234017490 | 234017516 | 153 | -22.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000324695 | hsa-miR-641 | 234018134 | 234018141 | 8mer-1a | 234018119 | 234018141 | 159 | -15.47 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000433712 | hsa-miR-548aa | 234017430 | 234017437 | 8mer-1a | 234017411 | 234017437 | 157 | -13.6 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000433712 | hsa-miR-641 | 234017510 | 234017516 | 7mer-1a | 234017490 | 234017516 | 153 | -22.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000433712 | hsa-miR-641 | 234018134 | 234018141 | 8mer-1a | 234018119 | 234018141 | 159 | -15.47 |
CAediting_442554 | chr5_154685830_+ | ENSG00000144481.15 | ENST00000444298 | hsa-miR-1303 | 233960902 | 233960908 | 7mer-m8 | 233960888 | 233960909 | 155 | -14.19 |
CAediting_442554 | chr5_154685830_+ | ENSG00000144481.15 | ENST00000444298 | hsa-miR-1303 | 233963354 | 233963361 | 8mer-1a | 233963343 | 233963361 | 148 | -16.34 |
CAediting_77128 | chr1_85133844_+ | ENSG00000144481.15 | ENST00000444298 | hsa-miR-4423-3p | 233983205 | 233983211 | 7mer-m8 | 233983192 | 233983212 | 145 | -18.46 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000456930 | hsa-miR-548aa | 234017430 | 234017437 | 8mer-1a | 234017411 | 234017437 | 157 | -13.6 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000456930 | hsa-miR-641 | 234017510 | 234017516 | 7mer-1a | 234017490 | 234017516 | 153 | -22.61 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000439148 | hsa-miR-548aa | 234017430 | 234017437 | 8mer-1a | 234017411 | 234017437 | 157 | -13.6 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000439148 | hsa-miR-641 | 234017510 | 234017516 | 7mer-1a | 234017490 | 234017516 | 153 | -22.61 |
CAediting_1351755 | chr19_40282625_- | ENSG00000144481.15 | ENST00000439148 | hsa-miR-641 | 234018134 | 234018141 | 8mer-1a | 234018119 | 234018141 | 159 | -15.47 |
CAediting_468389 | chr6_31355314_- | ENSG00000144481.15 | ENST00000444298 | hsa-miR-6891-5p | 233960969 | 233960976 | 8mer-1a | 233960958 | 233960976 | 145 | -19.83 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000144481.15 | ENST00000324695 | hsa-miR-200b-3p | 234018211 | 234018216 | 6mer | 234018196 | 234018217 | 140 | -8.03 |
CAediting_1368054 | chr19_46709310_- | ENSG00000144481.15 | ENST00000324695 | hsa-miR-320e | 234018944 | 234018950 | 7mer-m8 | 234018934 | 234018951 | 147 | -21.23 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000324695 | hsa-miR-548aa | 234018104 | 234018110 | 7mer-m8 | 234018084 | 234018111 | 151 | -9.4 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000144481.15 | ENST00000324695 | hsa-miR-548aa | 234018104 | 234018110 | 7mer-m8 | 234018084 | 234018111 | 151 | -9.4 |
CAediting_468389 | chr6_31355314_- | ENSG00000144481.15 | ENST00000324695 | hsa-miR-6891-5p | 234017560 | 234017566 | 7mer-m8 | 234017550 | 234017567 | 155 | -22.88 |
CAediting_393 | chr1_1167164_+ | ENSG00000144481.15 | ENST00000433712 | hsa-miR-200b-3p | 234018211 | 234018216 | 6mer | 234018196 | 234018217 | 140 | -8.03 |
CAediting_1368054 | chr19_46709310_- | ENSG00000144481.15 | ENST00000433712 | hsa-miR-320e | 234018944 | 234018950 | 7mer-m8 | 234018934 | 234018951 | 147 | -21.23 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000433712 | hsa-miR-548aa | 234018104 | 234018110 | 7mer-m8 | 234018084 | 234018111 | 151 | -9.4 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000144481.15 | ENST00000433712 | hsa-miR-548aa | 234018104 | 234018110 | 7mer-m8 | 234018084 | 234018111 | 151 | -9.4 |
CAediting_468389 | chr6_31355314_- | ENSG00000144481.15 | ENST00000433712 | hsa-miR-6891-5p | 234017560 | 234017566 | 7mer-m8 | 234017550 | 234017567 | 155 | -22.88 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000144481.15 | ENST00000439148 | hsa-miR-548aa | 234018104 | 234018110 | 7mer-m8 | 234018084 | 234018111 | 151 | -9.4 |
CAediting_468389 | chr6_31355314_- | ENSG00000144481.15 | ENST00000439148 | hsa-miR-6891-5p | 234017560 | 234017566 | 7mer-m8 | 234017550 | 234017567 | 155 | -22.88 |
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The effects of the RNA editing to the stability of the RNA structures for TRPM8 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for TRPM8 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for TRPM8 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for TRPM8 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for TRPM8 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
TRPM8 | Q7Z2W7 | DB00825 | Levomenthol | Transient receptor potential cation channel subfamily M member 8 | SmallMoleculeDrug | approved |
TRPM8 | Q7Z2W7 | DB01744 | Camphor | Transient receptor potential cation channel subfamily M member 8 | SmallMoleculeDrug | approved |
TRPM8 | Q7Z2W7 | DB09061 | Cannabidiol | Transient receptor potential cation channel subfamily M member 8 | SmallMoleculeDrug | approved|investigational |
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RelatedDiseases for TRPM8 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
TRPM8 | C0007852 | Cervical Migraine Syndrome | 1 | CTD_human |
TRPM8 | C0018984 | Hemicrania migraine | 1 | CTD_human |
TRPM8 | C0149931 | Migraine Disorders | 1 | CTD_human |
TRPM8 | C0270858 | Abdominal Migraine | 1 | CTD_human |
TRPM8 | C0338480 | Common Migraine | 1 | CTD_human |
TRPM8 | C0338489 | Status Migrainosus | 1 | CTD_human |
TRPM8 | C0521664 | Acute Confusional Migraine | 1 | CTD_human |
TRPM8 | C0700438 | Sick Headaches | 1 | CTD_human |