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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: CACNB1 (CAeditome ID:782)

Gene summary for CACNB1

check button Gene summary
Gene informationGene symbol

CACNB1

Gene ID

782

Gene namecalcium voltage-gated channel auxiliary subunit beta 1
SynonymsCAB1|CACNLB1|CCHLB1
Cytomap

17q12

Type of geneprotein-coding
Descriptionvoltage-dependent L-type calcium channel subunit beta-1calcium channel voltage-dependent subunit beta 1calcium channel, L type, beta 1 polypeptidecalcium channel, voltage-dependent, beta 1 subunitdihydropyridine-sensitive L-type, calcium channel beta-
Modification date20210518
UniProtAcc

Q02641

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for CACNB1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000067191.14

check button RNA A-to-I editing events in Cancer.
CAediting_1188701(39178449, -), CAediting_1188702(39178451, -), CAediting_1188703(39178460, -), CAediting_1188704(39178468, -), CAediting_1188705(39178473, -), CAediting_1188706(39178496, -), CAediting_1188707(39178501, -), CAediting_1188708(39178504, -), CAediting_1188709(39178508, -), CAediting_1188710(39178528, -), CAediting_1188711(39178533, -), CAediting_1188712(39178536, -), CAediting_1188713(39178544, -), CAediting_1188714(39178548, -), CAediting_1188715(39178559, -), CAediting_1188716(39178560, -), CAediting_1188717(39178562, -), CAediting_1188718(39178578, -), CAediting_1188719(39178579, -), CAediting_1188720(39178582, -), CAediting_1188721(39178584, -), CAediting_1188722(39178586, -), CAediting_1188723(39178610, -), CAediting_1188724(39178628, -), CAediting_1188725(39178629, -), CAediting_1188726(39178633, -), CAediting_1188727(39178639, -), CAediting_1188728(39178641, -), CAediting_1188729(39178647, -), CAediting_1188730(39178655, -), CAediting_1188731(39178656, -), CAediting_1188732(39178664, -), CAediting_1188733(39178668, -), CAediting_1188734(39178672, -), CAediting_1188735(39179037, -), CAediting_1188736(39179049, -), CAediting_1188737(39179050, -), CAediting_1188738(39179051, -), CAediting_1188739(39179109, -), CAediting_1188740(39179112, -), CAediting_1188741(39179126, -), CAediting_1188742(39179129, -), CAediting_1188743(39179144, -), CAediting_1188744(39179145, -), CAediting_1188745(39179169, -), CAediting_1188746(39179171, -), CAediting_1188747(39179181, -), CAediting_1188748(39179184, -), CAediting_1188749(39179193, -), CAediting_1188750(39179344, -), CAediting_1188751(39179421, -), CAediting_1188752(39179453, -), CAediting_1188753(39179459, -), CAediting_1188754(39179469, -), CAediting_1188755(39179472, -), CAediting_1188756(39179505, -), CAediting_1188757(39179529, -), CAediting_1188758(39179565, -), CAediting_1188759(39179651, -), CAediting_1188760(39179655, -), CAediting_1188761(39179664, -), CAediting_1188762(39179682, -), CAediting_1188763(39179732, -), CAediting_1188764(39179781, -), CAediting_1188765(39179785, -), CAediting_1188766(39179787, -), CAediting_1188767(39179797, -), CAediting_1188768(39179832, -), CAediting_1188769(39179833, -), CAediting_1188770(39179857, -), CAediting_1188771(39179903, -), CAediting_1188772(39179907, -), CAediting_1188773(39180004, -), CAediting_1188774(39180006, -), CAediting_1188775(39180018, -), CAediting_1188776(39180019, -), CAediting_1188777(39180020, -), CAediting_1188778(39180033, -), CAediting_1188779(39180048, -), CAediting_1188780(39180060, -), CAediting_1188781(39180082, -), CAediting_1188782(39180099, -), CAediting_1188783(39180102, -), CAediting_1188784(39180117, -), CAediting_1188785(39180121, -), CAediting_1188786(39180125, -), CAediting_1188787(39180141, -), CAediting_1188788(39180143, -), CAediting_1188789(39180153, -), CAediting_1188790(39180165, -), CAediting_1188791(39180176, -), CAediting_1188792(39180179, -), CAediting_1188793(39180185, -), CAediting_1188794(39180200, -), CAediting_1188795(39180205, -), CAediting_1188796(39180215, -), CAediting_1188797(39180249, -), CAediting_1188798(39180398, -), CAediting_1188799(39180411, -), CAediting_1188800(39180420, -), CAediting_1188801(39180433, -), CAediting_1188802(39180435, -), CAediting_1188803(39180436, -), CAediting_1188804(39180437, -), CAediting_1188805(39180438, -), CAediting_1188806(39180472, -), CAediting_1188807(39180483, -), CAediting_1188808(39180489, -), CAediting_1188809(39180492, -), CAediting_1188810(39180533, -), CAediting_1188811(39180546, -), CAediting_1188812(39180572, -), CAediting_1188813(39180573, -), CAediting_1188814(39180579, -), CAediting_1188815(39180608, -), CAediting_1188816(39180773, -), CAediting_1188817(39180774, -), CAediting_1188818(39180805, -), CAediting_1188819(39180828, -), CAediting_1188820(39180845, -), CAediting_1188821(39180850, -), CAediting_1188822(39180851, -), CAediting_1188823(39180857, -), CAediting_1188824(39180859, -), CAediting_1188825(39180877, -), CAediting_1188826(39180878, -), CAediting_1188827(39181123, -), CAediting_1188828(39181166, -), CAediting_1188829(39181170, -), CAediting_1188830(39181190, -), CAediting_1188831(39181226, -), CAediting_1188832(39181231, -), CAediting_1188833(39181232, -), CAediting_1188834(39181238, -), CAediting_1188835(39181258, -), CAediting_1188836(39181261, -), CAediting_1188837(39181262, -), CAediting_1188838(39181263, -), CAediting_1188839(39181265, -), CAediting_1188840(39181271, -), CAediting_1188841(39181287, -), CAediting_1188842(39181292, -), CAediting_1188843(39181310, -), CAediting_1188844(39181312, -), CAediting_1188845(39181313, -), CAediting_1188846(39181320, -), CAediting_1188847(39181358, -), CAediting_1188848(39181361, -), CAediting_1188849(39181367, -), CAediting_1188850(39181373, -), CAediting_1188851(39181375, -), CAediting_1188852(39181385, -), CAediting_1188853(39181389, -), CAediting_1188854(39181760, -), CAediting_1188855(39181772, -), CAediting_1188856(39181773, -), CAediting_1188857(39181782, -), CAediting_1188858(39181813, -), CAediting_1188859(39181815, -), CAediting_1188860(39181826, -), CAediting_1188861(39181849, -), CAediting_1188862(39181852, -), CAediting_1188863(39181855, -), CAediting_1188864(39181912, -), CAediting_1188865(39181918, -), CAediting_1188866(39181978, -), CAediting_1188867(39181995, -), CAediting_1188868(39181998, -), CAediting_1188869(39182039, -), CAediting_1188870(39182049, -), CAediting_1188871(39182190, -), CAediting_1188872(39182245, -), CAediting_1188873(39182252, -), CAediting_1188874(39182266, -), CAediting_1188875(39182275, -), CAediting_1188876(39182435, -), CAediting_1188877(39182442, -), CAediting_1188878(39182444, -), CAediting_1188879(39182456, -), CAediting_1188880(39182457, -), CAediting_1188881(39182533, -), CAediting_1188882(39182536, -), CAediting_1188883(39182552, -), CAediting_1188884(39182578, -), CAediting_1188885(39182580, -), CAediting_1188886(39182593, -), CAediting_1188887(39182602, -), CAediting_1188888(39182619, -), CAediting_1188889(39182620, -), CAediting_1188890(39182626, -), CAediting_1188891(39182633, -), CAediting_1188892(39182645, -), CAediting_1188893(39182699, -), CAediting_1188894(39182716, -), CAediting_1188895(39183210, -), CAediting_1188896(39183286, -), CAediting_1188897(39188894, -), CAediting_1188898(39189005, -),

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RNA editing positional annotations for CACNB1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1188701chr17_39178449_-ncRNA_intronic
CAediting_1188702chr17_39178451_-ncRNA_intronic
CAediting_1188703chr17_39178460_-ncRNA_intronic
CAediting_1188704chr17_39178468_-ncRNA_intronic
CAediting_1188705chr17_39178473_-ncRNA_intronic
CAediting_1188706chr17_39178496_-ncRNA_intronic
CAediting_1188707chr17_39178501_-ncRNA_intronic
CAediting_1188708chr17_39178504_-ncRNA_intronic
CAediting_1188709chr17_39178508_-ncRNA_intronic
CAediting_1188710chr17_39178528_-ncRNA_intronic
CAediting_1188711chr17_39178533_-ncRNA_intronic
CAediting_1188712chr17_39178536_-ncRNA_intronic
CAediting_1188713chr17_39178544_-ncRNA_intronic
CAediting_1188714chr17_39178548_-ncRNA_intronic
CAediting_1188715chr17_39178559_-ncRNA_intronic
CAediting_1188716chr17_39178560_-ncRNA_intronic
CAediting_1188717chr17_39178562_-ncRNA_intronic
CAediting_1188718chr17_39178578_-ncRNA_intronic
CAediting_1188719chr17_39178579_-ncRNA_intronic
CAediting_1188720chr17_39178582_-ncRNA_intronic
CAediting_1188721chr17_39178584_-ncRNA_intronic
CAediting_1188722chr17_39178586_-ncRNA_intronic
CAediting_1188723chr17_39178610_-ncRNA_intronic
CAediting_1188724chr17_39178628_-ncRNA_intronic
CAediting_1188725chr17_39178629_-ncRNA_intronic
CAediting_1188726chr17_39178633_-ncRNA_intronic
CAediting_1188727chr17_39178639_-ncRNA_intronic
CAediting_1188728chr17_39178641_-ncRNA_intronic
CAediting_1188729chr17_39178647_-ncRNA_intronic
CAediting_1188730chr17_39178655_-ncRNA_intronic
CAediting_1188731chr17_39178656_-ncRNA_intronic
CAediting_1188732chr17_39178664_-ncRNA_intronic
CAediting_1188733chr17_39178668_-ncRNA_intronic
CAediting_1188734chr17_39178672_-ncRNA_intronic
CAediting_1188735chr17_39179037_-ncRNA_intronic
CAediting_1188736chr17_39179049_-ncRNA_intronic
CAediting_1188737chr17_39179050_-ncRNA_intronic
CAediting_1188738chr17_39179051_-ncRNA_intronic
CAediting_1188739chr17_39179109_-ncRNA_intronic
CAediting_1188740chr17_39179112_-ncRNA_intronic
CAediting_1188741chr17_39179126_-ncRNA_intronic
CAediting_1188742chr17_39179129_-ncRNA_intronic
CAediting_1188743chr17_39179144_-ncRNA_intronic
CAediting_1188744chr17_39179145_-ncRNA_intronic
CAediting_1188745chr17_39179169_-ncRNA_intronic
CAediting_1188746chr17_39179171_-ncRNA_intronic
CAediting_1188747chr17_39179181_-ncRNA_intronic
CAediting_1188748chr17_39179184_-ncRNA_intronic
CAediting_1188749chr17_39179193_-ncRNA_intronic
CAediting_1188750chr17_39179344_-ncRNA_intronic
CAediting_1188751chr17_39179421_-ncRNA_intronic
CAediting_1188752chr17_39179453_-ncRNA_intronic
CAediting_1188753chr17_39179459_-ncRNA_intronic
CAediting_1188754chr17_39179469_-ncRNA_intronic
CAediting_1188755chr17_39179472_-ncRNA_intronic
CAediting_1188756chr17_39179505_-ncRNA_intronic
CAediting_1188757chr17_39179529_-ncRNA_intronic
CAediting_1188758chr17_39179565_-ncRNA_intronic
CAediting_1188759chr17_39179651_-ncRNA_intronic
CAediting_1188760chr17_39179655_-ncRNA_intronic
CAediting_1188761chr17_39179664_-ncRNA_intronic
CAediting_1188762chr17_39179682_-ncRNA_intronic
CAediting_1188763chr17_39179732_-ncRNA_intronic
CAediting_1188764chr17_39179781_-ncRNA_intronic
CAediting_1188765chr17_39179785_-ncRNA_intronic
CAediting_1188766chr17_39179787_-ncRNA_intronic
CAediting_1188767chr17_39179797_-ncRNA_intronic
CAediting_1188768chr17_39179832_-ncRNA_intronic
CAediting_1188769chr17_39179833_-ncRNA_intronic
CAediting_1188770chr17_39179857_-ncRNA_intronic
CAediting_1188771chr17_39179903_-ncRNA_intronic
CAediting_1188772chr17_39179907_-ncRNA_intronic
CAediting_1188773chr17_39180004_-ncRNA_intronic
CAediting_1188774chr17_39180006_-ncRNA_intronic
CAediting_1188775chr17_39180018_-ncRNA_intronic
CAediting_1188776chr17_39180019_-ncRNA_intronic
CAediting_1188777chr17_39180020_-ncRNA_intronic
CAediting_1188778chr17_39180033_-ncRNA_intronic
CAediting_1188779chr17_39180048_-ncRNA_intronic
CAediting_1188780chr17_39180060_-ncRNA_intronic
CAediting_1188781chr17_39180082_-ncRNA_intronic
CAediting_1188782chr17_39180099_-ncRNA_intronic
CAediting_1188783chr17_39180102_-ncRNA_intronic
CAediting_1188784chr17_39180117_-ncRNA_intronic
CAediting_1188785chr17_39180121_-ncRNA_intronic
CAediting_1188786chr17_39180125_-ncRNA_intronic
CAediting_1188787chr17_39180141_-ncRNA_intronic
CAediting_1188788chr17_39180143_-ncRNA_intronic
CAediting_1188789chr17_39180153_-ncRNA_intronic
CAediting_1188790chr17_39180165_-ncRNA_intronic
CAediting_1188791chr17_39180176_-ncRNA_intronic
CAediting_1188792chr17_39180179_-ncRNA_intronic
CAediting_1188793chr17_39180185_-ncRNA_intronic
CAediting_1188794chr17_39180200_-ncRNA_intronic
CAediting_1188795chr17_39180205_-ncRNA_intronic
CAediting_1188796chr17_39180215_-ncRNA_intronic
CAediting_1188797chr17_39180249_-ncRNA_intronic
CAediting_1188798chr17_39180398_-ncRNA_intronic
CAediting_1188799chr17_39180411_-ncRNA_intronic
CAediting_1188800chr17_39180420_-ncRNA_intronic
CAediting_1188801chr17_39180433_-ncRNA_intronic
CAediting_1188802chr17_39180435_-ncRNA_intronic
CAediting_1188803chr17_39180436_-ncRNA_intronic
CAediting_1188804chr17_39180437_-ncRNA_intronic
CAediting_1188805chr17_39180438_-ncRNA_intronic
CAediting_1188806chr17_39180472_-ncRNA_intronic
CAediting_1188807chr17_39180483_-ncRNA_intronic
CAediting_1188808chr17_39180489_-ncRNA_intronic
CAediting_1188809chr17_39180492_-ncRNA_intronic
CAediting_1188810chr17_39180533_-ncRNA_intronic
CAediting_1188811chr17_39180546_-ncRNA_intronic
CAediting_1188812chr17_39180572_-ncRNA_intronic
CAediting_1188813chr17_39180573_-ncRNA_intronic
CAediting_1188814chr17_39180579_-ncRNA_intronic
CAediting_1188815chr17_39180608_-ncRNA_intronic
CAediting_1188816chr17_39180773_-ncRNA_intronic
CAediting_1188817chr17_39180774_-ncRNA_intronic
CAediting_1188818chr17_39180805_-ncRNA_intronic
CAediting_1188819chr17_39180828_-ncRNA_intronic
CAediting_1188820chr17_39180845_-ncRNA_intronic
CAediting_1188821chr17_39180850_-ncRNA_intronic
CAediting_1188822chr17_39180851_-ncRNA_intronic
CAediting_1188823chr17_39180857_-ncRNA_intronic
CAediting_1188824chr17_39180859_-ncRNA_intronic
CAediting_1188825chr17_39180877_-ncRNA_intronic
CAediting_1188826chr17_39180878_-ncRNA_intronic
CAediting_1188827chr17_39181123_-ncRNA_intronic
CAediting_1188828chr17_39181166_-ncRNA_intronic
CAediting_1188829chr17_39181170_-ncRNA_intronic
CAediting_1188830chr17_39181190_-ncRNA_intronic
CAediting_1188831chr17_39181226_-ncRNA_intronic
CAediting_1188832chr17_39181231_-ncRNA_intronic
CAediting_1188833chr17_39181232_-ncRNA_intronic
CAediting_1188834chr17_39181238_-ncRNA_intronic
CAediting_1188835chr17_39181258_-ncRNA_intronic
CAediting_1188836chr17_39181261_-ncRNA_intronic
CAediting_1188837chr17_39181262_-ncRNA_intronic
CAediting_1188838chr17_39181263_-ncRNA_intronic
CAediting_1188839chr17_39181265_-ncRNA_intronic
CAediting_1188840chr17_39181271_-ncRNA_intronic
CAediting_1188841chr17_39181287_-ncRNA_intronic
CAediting_1188842chr17_39181292_-ncRNA_intronic
CAediting_1188843chr17_39181310_-ncRNA_intronic
CAediting_1188844chr17_39181312_-ncRNA_intronic
CAediting_1188845chr17_39181313_-ncRNA_intronic
CAediting_1188846chr17_39181320_-ncRNA_intronic
CAediting_1188847chr17_39181358_-ncRNA_intronic
CAediting_1188848chr17_39181361_-ncRNA_intronic
CAediting_1188849chr17_39181367_-ncRNA_intronic
CAediting_1188850chr17_39181373_-ncRNA_intronic
CAediting_1188851chr17_39181375_-ncRNA_intronic
CAediting_1188852chr17_39181385_-ncRNA_intronic
CAediting_1188853chr17_39181389_-ncRNA_intronic
CAediting_1188854chr17_39181760_-ncRNA_intronic
CAediting_1188855chr17_39181772_-ncRNA_intronic
CAediting_1188856chr17_39181773_-ncRNA_intronic
CAediting_1188857chr17_39181782_-ncRNA_intronic
CAediting_1188858chr17_39181813_-ncRNA_intronic
CAediting_1188859chr17_39181815_-ncRNA_intronic
CAediting_1188860chr17_39181826_-ncRNA_intronic
CAediting_1188861chr17_39181849_-ncRNA_intronic
CAediting_1188862chr17_39181852_-ncRNA_intronic
CAediting_1188863chr17_39181855_-ncRNA_intronic
CAediting_1188864chr17_39181912_-ncRNA_intronic
CAediting_1188865chr17_39181918_-ncRNA_intronic
CAediting_1188866chr17_39181978_-ncRNA_intronic
CAediting_1188867chr17_39181995_-ncRNA_intronic
CAediting_1188868chr17_39181998_-ncRNA_intronic
CAediting_1188869chr17_39182039_-ncRNA_intronic
CAediting_1188870chr17_39182049_-ncRNA_intronic
CAediting_1188871chr17_39182190_-ncRNA_intronic
CAediting_1188872chr17_39182245_-ncRNA_intronic
CAediting_1188873chr17_39182252_-ncRNA_intronic
CAediting_1188874chr17_39182266_-ncRNA_intronic
CAediting_1188875chr17_39182275_-ncRNA_intronic
CAediting_1188876chr17_39182435_-ncRNA_intronic
CAediting_1188877chr17_39182442_-ncRNA_intronic
CAediting_1188878chr17_39182444_-ncRNA_intronic
CAediting_1188879chr17_39182456_-ncRNA_intronic
CAediting_1188880chr17_39182457_-ncRNA_intronic
CAediting_1188881chr17_39182533_-ncRNA_intronic
CAediting_1188882chr17_39182536_-ncRNA_intronic
CAediting_1188883chr17_39182552_-ncRNA_intronic
CAediting_1188884chr17_39182578_-ncRNA_intronic
CAediting_1188885chr17_39182580_-ncRNA_intronic
CAediting_1188886chr17_39182593_-ncRNA_intronic
CAediting_1188887chr17_39182602_-ncRNA_intronic
CAediting_1188888chr17_39182619_-ncRNA_intronic
CAediting_1188889chr17_39182620_-ncRNA_intronic
CAediting_1188890chr17_39182626_-ncRNA_intronic
CAediting_1188891chr17_39182633_-ncRNA_intronic
CAediting_1188892chr17_39182645_-ncRNA_intronic
CAediting_1188893chr17_39182699_-ncRNA_intronic
CAediting_1188894chr17_39182716_-ncRNA_intronic
CAediting_1188895chr17_39183210_-ncRNA_intronic
CAediting_1188896chr17_39183286_-ncRNA_intronic
CAediting_1188897chr17_39188894_-ncRNA_intronic
CAediting_1188898chr17_39189005_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1188701chr17_39178449_-SINEAluAluJr4
CAediting_1188702chr17_39178451_-SINEAluAluJr4
CAediting_1188703chr17_39178460_-SINEAluAluJr4
CAediting_1188704chr17_39178468_-SINEAluAluJr4
CAediting_1188705chr17_39178473_-SINEAluAluJr4
CAediting_1188706chr17_39178496_-SINEAluAluJr4
CAediting_1188707chr17_39178501_-SINEAluAluJr4
CAediting_1188708chr17_39178504_-SINEAluAluJr4
CAediting_1188709chr17_39178508_-SINEAluAluJr4
CAediting_1188710chr17_39178528_-SINEAluAluJr4
CAediting_1188711chr17_39178533_-SINEAluAluJr4
CAediting_1188712chr17_39178536_-SINEAluAluJr4
CAediting_1188713chr17_39178544_-SINEAluAluJr4
CAediting_1188714chr17_39178548_-SINEAluAluJr4
CAediting_1188715chr17_39178559_-SINEAluAluJr4
CAediting_1188716chr17_39178560_-SINEAluAluJr4
CAediting_1188717chr17_39178562_-SINEAluAluJr4
CAediting_1188718chr17_39178578_-SINEAluAluJr4
CAediting_1188719chr17_39178579_-SINEAluAluJr4
CAediting_1188720chr17_39178582_-SINEAluAluJr4
CAediting_1188721chr17_39178584_-SINEAluAluJr4
CAediting_1188722chr17_39178586_-SINEAluAluJr4
CAediting_1188723chr17_39178610_-SINEAluAluJr4
CAediting_1188724chr17_39178628_-SINEAluAluJr4
CAediting_1188725chr17_39178629_-SINEAluAluJr4
CAediting_1188726chr17_39178633_-SINEAluAluJr4
CAediting_1188727chr17_39178639_-SINEAluAluJr4
CAediting_1188728chr17_39178641_-SINEAluAluJr4
CAediting_1188729chr17_39178647_-SINEAluAluJr4
CAediting_1188730chr17_39178655_-SINEAluAluJr4
CAediting_1188731chr17_39178656_-SINEAluAluJr4
CAediting_1188732chr17_39178664_-SINEAluAluJr4
CAediting_1188733chr17_39178668_-SINEAluAluJr4
CAediting_1188734chr17_39178672_-SINEAluAluJr4
CAediting_1188735chr17_39179037_-SINEAluAluY
CAediting_1188736chr17_39179049_-SINEAluAluY
CAediting_1188737chr17_39179050_-SINEAluAluY
CAediting_1188738chr17_39179051_-SINEAluAluY
CAediting_1188739chr17_39179109_-SINEAluAluY
CAediting_1188740chr17_39179112_-SINEAluAluY
CAediting_1188741chr17_39179126_-SINEAluAluY
CAediting_1188742chr17_39179129_-SINEAluAluY
CAediting_1188743chr17_39179144_-SINEAluAluY
CAediting_1188744chr17_39179145_-SINEAluAluY
CAediting_1188745chr17_39179169_-SINEAluAluY
CAediting_1188746chr17_39179171_-SINEAluAluY
CAediting_1188747chr17_39179181_-SINEAluAluY
CAediting_1188748chr17_39179184_-SINEAluAluY
CAediting_1188749chr17_39179193_-SINEAluAluY
CAediting_1188750chr17_39179344_-SINEAluAluY
CAediting_1188751chr17_39179421_-SINEAluAluY
CAediting_1188752chr17_39179453_-SINEAluAluY
CAediting_1188753chr17_39179459_-SINEAluAluY
CAediting_1188754chr17_39179469_-SINEAluAluY
CAediting_1188755chr17_39179472_-SINEAluAluY
CAediting_1188756chr17_39179505_-SINEAluAluY
CAediting_1188757chr17_39179529_-SINEAluAluY
CAediting_1188758chr17_39179565_-SINEAluAluY
CAediting_1188759chr17_39179651_-SINEAluAluSx
CAediting_1188760chr17_39179655_-SINEAluAluSx
CAediting_1188761chr17_39179664_-SINEAluAluSx
CAediting_1188762chr17_39179682_-SINEAluAluSx
CAediting_1188763chr17_39179732_-SINEAluAluSx
CAediting_1188764chr17_39179781_-SINEAluAluSx
CAediting_1188765chr17_39179785_-SINEAluAluSx
CAediting_1188766chr17_39179787_-SINEAluAluSx
CAediting_1188767chr17_39179797_-SINEAluAluSx
CAediting_1188768chr17_39179832_-SINEAluAluSx
CAediting_1188769chr17_39179833_-SINEAluAluSx
CAediting_1188770chr17_39179857_-SINEAluAluSx
CAediting_1188771chr17_39179903_-SINEAluAluSx
CAediting_1188772chr17_39179907_-SINEAluAluSx
CAediting_1188773chr17_39180004_-SINEAluAluSq
CAediting_1188774chr17_39180006_-SINEAluAluSq
CAediting_1188775chr17_39180018_-SINEAluAluSq
CAediting_1188776chr17_39180019_-SINEAluAluSq
CAediting_1188777chr17_39180020_-SINEAluAluSq
CAediting_1188778chr17_39180033_-SINEAluAluSq
CAediting_1188779chr17_39180048_-SINEAluAluSq
CAediting_1188780chr17_39180060_-SINEAluAluSq
CAediting_1188781chr17_39180082_-SINEAluAluSq
CAediting_1188782chr17_39180099_-SINEAluAluSq
CAediting_1188783chr17_39180102_-SINEAluAluSq
CAediting_1188784chr17_39180117_-SINEAluAluSq
CAediting_1188785chr17_39180121_-SINEAluAluSq
CAediting_1188786chr17_39180125_-SINEAluAluSq
CAediting_1188787chr17_39180141_-SINEAluAluSq
CAediting_1188788chr17_39180143_-SINEAluAluSq
CAediting_1188789chr17_39180153_-SINEAluAluSq
CAediting_1188790chr17_39180165_-SINEAluAluSq
CAediting_1188791chr17_39180176_-SINEAluAluSq
CAediting_1188792chr17_39180179_-SINEAluAluSq
CAediting_1188793chr17_39180185_-SINEAluAluSq
CAediting_1188794chr17_39180200_-SINEAluAluSq
CAediting_1188795chr17_39180205_-SINEAluAluSq
CAediting_1188796chr17_39180215_-SINEAluAluSq
CAediting_1188797chr17_39180249_-SINEAluAluSq
CAediting_1188798chr17_39180398_-SINEAluAluSx1
CAediting_1188799chr17_39180411_-SINEAluAluSx1
CAediting_1188800chr17_39180420_-SINEAluAluSx1
CAediting_1188801chr17_39180433_-SINEAluAluSx1
CAediting_1188802chr17_39180435_-SINEAluAluSx1
CAediting_1188803chr17_39180436_-SINEAluAluSx1
CAediting_1188804chr17_39180437_-SINEAluAluSx1
CAediting_1188805chr17_39180438_-SINEAluAluSx1
CAediting_1188806chr17_39180472_-SINEAluAluSx1
CAediting_1188807chr17_39180483_-SINEAluAluSx1
CAediting_1188808chr17_39180489_-SINEAluAluSx1
CAediting_1188809chr17_39180492_-SINEAluAluSx1
CAediting_1188810chr17_39180533_-SINEAluAluSx1
CAediting_1188811chr17_39180546_-SINEAluAluSx1
CAediting_1188812chr17_39180572_-SINEAluAluSx1
CAediting_1188813chr17_39180573_-SINEAluAluSx1
CAediting_1188814chr17_39180579_-SINEAluAluSx1
CAediting_1188815chr17_39180608_-SINEAluAluSx1
CAediting_1188816chr17_39180773_-SINEAluAluSz6
CAediting_1188817chr17_39180774_-SINEAluAluSz6
CAediting_1188818chr17_39180805_-SINEAluAluSz6
CAediting_1188819chr17_39180828_-SINEAluAluSz6
CAediting_1188820chr17_39180845_-SINEAluAluSz6
CAediting_1188821chr17_39180850_-SINEAluAluSz6
CAediting_1188822chr17_39180851_-SINEAluAluSz6
CAediting_1188823chr17_39180857_-SINEAluAluSz6
CAediting_1188824chr17_39180859_-SINEAluAluSz6
CAediting_1188825chr17_39180877_-LINEL1L1MC4
CAediting_1188826chr17_39180878_-LINEL1L1MC4
CAediting_1188827chr17_39181123_-SINEAluAluSx1
CAediting_1188828chr17_39181166_-SINEAluAluSx1
CAediting_1188829chr17_39181170_-SINEAluAluSx1
CAediting_1188830chr17_39181190_-SINEAluAluSx1
CAediting_1188831chr17_39181226_-SINEAluAluSx1
CAediting_1188832chr17_39181231_-SINEAluAluSx1
CAediting_1188833chr17_39181232_-SINEAluAluSx1
CAediting_1188834chr17_39181238_-SINEAluAluSx1
CAediting_1188835chr17_39181258_-SINEAluAluSx1
CAediting_1188836chr17_39181261_-SINEAluAluSx1
CAediting_1188837chr17_39181262_-SINEAluAluSx1
CAediting_1188838chr17_39181263_-SINEAluAluSx1
CAediting_1188839chr17_39181265_-SINEAluAluSx1
CAediting_1188840chr17_39181271_-SINEAluAluSx1
CAediting_1188841chr17_39181287_-SINEAluAluSx1
CAediting_1188842chr17_39181292_-SINEAluAluSx1
CAediting_1188843chr17_39181310_-SINEAluAluSx1
CAediting_1188844chr17_39181312_-SINEAluAluSx1
CAediting_1188845chr17_39181313_-SINEAluAluSx1
CAediting_1188846chr17_39181320_-SINEAluAluSx1
CAediting_1188847chr17_39181358_-SINEAluAluSx1
CAediting_1188848chr17_39181361_-SINEAluAluSx1
CAediting_1188849chr17_39181367_-SINEAluAluSx1
CAediting_1188850chr17_39181373_-SINEAluAluSx1
CAediting_1188851chr17_39181375_-SINEAluAluSx1
CAediting_1188852chr17_39181385_-SINEAluAluSx1
CAediting_1188853chr17_39181389_-SINEAluAluSx1
CAediting_1188854chr17_39181760_-SINEAluAluSz
CAediting_1188855chr17_39181772_-SINEAluAluSz
CAediting_1188856chr17_39181773_-SINEAluAluSz
CAediting_1188857chr17_39181782_-SINEAluAluSz
CAediting_1188858chr17_39181813_-SINEAluAluSz
CAediting_1188859chr17_39181815_-SINEAluAluSz
CAediting_1188860chr17_39181826_-SINEAluAluSz
CAediting_1188861chr17_39181849_-SINEAluAluSz
CAediting_1188862chr17_39181852_-SINEAluAluSz
CAediting_1188863chr17_39181855_-SINEAluAluSz
CAediting_1188864chr17_39181912_-SINEAluAluSx4
CAediting_1188865chr17_39181918_-SINEAluAluSx4
CAediting_1188866chr17_39181978_-SINEAluAluSx4
CAediting_1188867chr17_39181995_-SINEAluAluSx4
CAediting_1188868chr17_39181998_-SINEAluAluSx4
CAediting_1188869chr17_39182039_-SINEAluAluSx4
CAediting_1188870chr17_39182049_-SINEAluAluSx4
CAediting_1188871chr17_39182190_-SINEAluAluSz
CAediting_1188872chr17_39182245_-SINEAluAluSz
CAediting_1188873chr17_39182252_-SINEAluAluSz
CAediting_1188874chr17_39182266_-SINEAluAluSz
CAediting_1188875chr17_39182275_-SINEAluAluSz
CAediting_1188876chr17_39182435_-SINEAluAluSc8
CAediting_1188877chr17_39182442_-SINEAluAluSc8
CAediting_1188878chr17_39182444_-SINEAluAluSc8
CAediting_1188879chr17_39182456_-SINEAluAluSc8
CAediting_1188880chr17_39182457_-SINEAluAluSc8
CAediting_1188881chr17_39182533_-SINEAluAluSc8
CAediting_1188882chr17_39182536_-SINEAluAluSc8
CAediting_1188883chr17_39182552_-SINEAluAluSc8
CAediting_1188884chr17_39182578_-SINEAluAluSc8
CAediting_1188885chr17_39182580_-SINEAluAluSc8
CAediting_1188886chr17_39182593_-SINEAluAluSc8
CAediting_1188887chr17_39182602_-SINEAluAluSc8
CAediting_1188888chr17_39182619_-SINEAluAluSc8
CAediting_1188889chr17_39182620_-SINEAluAluSc8
CAediting_1188890chr17_39182626_-SINEAluAluSc8
CAediting_1188891chr17_39182633_-SINEAluAluSc8
CAediting_1188892chr17_39182645_-SINEAluAluSc8
CAediting_1188893chr17_39182699_-SINEAluAluSc8
CAediting_1188894chr17_39182716_-Simple_repeatSimple_repeat(AAAT)n
CAediting_1188895chr17_39183210_-SINEAluAluJr
CAediting_1188896chr17_39183286_-SINEAluAluJr
CAediting_1188897chr17_39188894_-SINEAluAluSq
CAediting_1188898chr17_39189005_-SINEAluAluSq

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RNA A-to-I editing events in the alternative splicing sites for CACNB1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000067191.14.CACNB1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000067191.14.CACNB1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for CACNB1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for CACNB1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for CACNB1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000067191.14ENST00000622445hsa-miR-605-3p39173913391739197mer-m83917391239173934147-14.32
CAediting_442554chr5_154685830_+ENSG00000067191.14ENST00000622445hsa-miR-130339177357391773637mer-m83917735639177377163-25.19
CAediting_1054808chr15_66496985_-ENSG00000067191.14ENST00000622445hsa-miR-451239174310391743178mer-1a3917431039174331154-20.87
CAediting_1368054chr19_46709310_-ENSG00000067191.14ENST00000622445hsa-miR-320e39173591391735977mer-m83917359039173608147-19.73
CAediting_1368054chr19_46709310_-ENSG00000067191.14ENST00000622445hsa-miR-320e39175029391750357mer-m83917502839175045156-18.18
CAediting_86358chr1_109598906_+ENSG00000067191.14ENST00000622445hsa-miR-197-5p39173970391739756mer3917396239173987144-30.05
CAediting_77128chr1_85133844_+ENSG00000067191.14ENST00000622445hsa-miR-4423-3p39174282391742887mer-m83917428139174301150-20.62
CAediting_77128chr1_85133844_+ENSG00000067191.14ENST00000622445hsa-miR-4423-3p39173620391736278mer-1a3917362039173640153-12.03
CAediting_228905chr2_188297554_+ENSG00000067191.14ENST00000622445hsa-miR-561-3p39175460391754667mer-m83917545939175480146-13.99
CAediting_580943chr7_100356700_+ENSG00000067191.14ENST00000622445hsa-miR-6840-3p39175023391750308mer-1a3917502339175044150-27.6
CAediting_524911chr7_5495852_-ENSG00000067191.14ENST00000622445hsa-miR-589-3p39174221391742277mer-m83917422039174245157-20.96
CAediting_524911chr7_5495852_-ENSG00000067191.14ENST00000394310hsa-miR-589-3p39177213391772197mer-m83917721239177235140-14.9
CAediting_524911chr7_5495852_-ENSG00000067191.14ENST00000344140hsa-miR-589-3p39177213391772197mer-m83917721239177235140-14.9

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1524209chrX_134546392_-ENSG00000067191.14ENST00000622445hsa-miR-503-5p39177411391774177mer-m83917741039177432146-20.87
CAediting_1368054chr19_46709310_-ENSG00000067191.14ENST00000622445hsa-miR-320e39174693391746997mer-m83917469239174709150-21.94
CAediting_688081chr9_63819627_+ENSG00000067191.14ENST00000622445hsa-miR-4477b39174882391748887mer-m83917488139174902143-8.99
CAediting_1054808chr15_66496985_-ENSG00000067191.14ENST00000622445hsa-miR-451239175017391750237mer-m83917501639175037153-20.46
CAediting_1524209chrX_134546392_-ENSG00000067191.14ENST00000622445hsa-miR-503-5p39174521391745277mer-m83917452039174542140-18.42
CAediting_1524209chrX_134546392_-ENSG00000067191.14ENST00000622445hsa-miR-503-5p39174236391742416mer3917422339174245140-22.01
CAediting_1524209chrX_134546392_-ENSG00000067191.14ENST00000622445hsa-miR-503-5p39174233391742386mer3917422339174245140-22.01
CAediting_1524209chrX_134546392_-ENSG00000067191.14ENST00000622445hsa-miR-503-5p39174224391742296mer3917422339174245140-22.01
CAediting_1351755chr19_40282625_-ENSG00000067191.14ENST00000622445hsa-miR-64139173476391734838mer-1a3917347639173498148-12.27

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for CACNB1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for CACNB1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
LUADCAediting_1188706chr17_39178496_-0.01412773076212090.275130916592295....

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Relation with cancer stages for CACNB1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for CACNB1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for CACNB1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status
CACNB1Q02641DB00273TopiramateVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB00308IbutilideVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB00381AmlodipineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB00421SpironolactoneVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB00825LevomentholVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB00898EthanolVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB04855DronedaroneVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB09089TrimebutineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved
CACNB1Q02641DB13746BioallethrinVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|experimental
CACNB1Q02641DB00243RanolazineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational
CACNB1Q02641DB00393NimodipineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational
CACNB1Q02641DB01118AmiodaroneVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational
CACNB1Q02641DB09236LacidipineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational
CACNB1Q02641DB09238ManidipineVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational
CACNB1Q02641DB00228EnfluraneVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational|vet_approved
CACNB1Q02641DB00653Magnesium sulfateVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational|vet_approved
CACNB1Q02641DB01110MiconazoleVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|investigational|vet_approved
CACNB1Q02641DB00153ErgocalciferolVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|nutraceutical
CACNB1Q02641DB13961Fish oilVoltage-dependent L-type calcium channel subunit beta-1 BiotechDrugapproved|nutraceutical
CACNB1Q02641DB00252PhenytoinVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|vet_approved
CACNB1Q02641DB11148ButambenVoltage-dependent L-type calcium channel subunit beta-1 SmallMoleculeDrugapproved|withdrawn

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RelatedDiseases for CACNB1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource