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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: ZNF195 (CAeditome ID:7748)

Gene summary for ZNF195

check button Gene summary
Gene informationGene symbol

ZNF195

Gene ID

7748

Gene namezinc finger protein 195
SynonymsHRF1|ZNFP104
Cytomap

11p15.4

Type of geneprotein-coding
Descriptionzinc finger protein 195hypoxia-regulated factor-1krueppel family zinc finger protein (znfp104)
Modification date20210518
UniProtAcc

O14628

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for ZNF195

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000005801.15

check button RNA A-to-I editing events in Cancer.
CAediting_793278(3346920, -), CAediting_793279(3351468, -), CAediting_793280(3351474, -), CAediting_793281(3351530, -), CAediting_793282(3351533, -), CAediting_793283(3361822, -), CAediting_793284(3361835, -), CAediting_793285(3361839, -), CAediting_793286(3361852, -), CAediting_793287(3361853, -), CAediting_793288(3362002, -), CAediting_793289(3364199, -), CAediting_793290(3364205, -), CAediting_793291(3364221, -), CAediting_793292(3366847, -), CAediting_793293(3366873, -), CAediting_793294(3366946, -), CAediting_793295(3367815, -), CAediting_793296(3367855, -), CAediting_793297(3367909, -), CAediting_793298(3367925, -), CAediting_793299(3367941, -), CAediting_793300(3367991, -), CAediting_793301(3367992, -), CAediting_793302(3368037, -), CAediting_793303(3368372, -),

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RNA editing positional annotations for ZNF195 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000005082.12c.A281Gp.D94GDBN
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000399602.7c.A281Gp.D94GDBN
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000526601.4c.A293Gp.D98GDBN
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000533036.4c.A338Gp.D113GDBN
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000534569.4c.A293Gp.D98GDBN
CAediting_793284chr11_3361835_-nonsynonymous SNVENST00000620374.3c.A293Gp.D98GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000005082.12c.A263Gp.E88GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000399602.7c.A263Gp.E88GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000526601.4c.A275Gp.E92GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000533036.4c.A320Gp.E107GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000534569.4c.A275Gp.E92GDBN
CAediting_793287chr11_3361853_-nonsynonymous SNVENST00000620374.3c.A275Gp.E92GDBN
CAediting_793292chr11_3366847_-nonsynonymous SNVENST00000525502.4c.A437Gp.K146RD.N

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_793278chr11_3346920_-intronic
CAediting_793279chr11_3351468_-intronic
CAediting_793280chr11_3351474_-intronic
CAediting_793281chr11_3351530_-intronic
CAediting_793282chr11_3351533_-intronic
CAediting_793283chr11_3361822_-exonic
CAediting_793284chr11_3361835_-exonic
CAediting_793285chr11_3361839_-exonic
CAediting_793286chr11_3361852_-exonic
CAediting_793287chr11_3361853_-exonic
CAediting_793288chr11_3362002_-exonic
CAediting_793289chr11_3364199_-ncRNA_intronic
CAediting_793290chr11_3364205_-ncRNA_intronic
CAediting_793291chr11_3364221_-ncRNA_intronic
CAediting_793292chr11_3366847_-exonic
CAediting_793293chr11_3366873_-exonic
CAediting_793294chr11_3366946_-exonic
CAediting_793295chr11_3367815_-ncRNA_intronic
CAediting_793296chr11_3367855_-ncRNA_intronic
CAediting_793297chr11_3367909_-ncRNA_intronic
CAediting_793298chr11_3367925_-ncRNA_intronic
CAediting_793299chr11_3367941_-ncRNA_intronic
CAediting_793300chr11_3367991_-ncRNA_intronic
CAediting_793301chr11_3367992_-ncRNA_intronic
CAediting_793302chr11_3368037_-ncRNA_intronic
CAediting_793303chr11_3368372_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_793278chr11_3346920_-SINEAluAluJr
CAediting_793279chr11_3351468_-SINEAluAluJr
CAediting_793280chr11_3351474_-SINEAluAluJr
CAediting_793281chr11_3351530_-SINEAluAluJr
CAediting_793282chr11_3351533_-SINEAluAluJr
CAediting_793283chr11_3361822_-SINEAluAluJb
CAediting_793284chr11_3361835_-SINEAluAluJb
CAediting_793285chr11_3361839_-SINEAluAluJb
CAediting_793286chr11_3361852_-SINEAluAluJb
CAediting_793287chr11_3361853_-SINEAluAluJb
CAediting_793288chr11_3362002_-SINEAluAluJb
CAediting_793289chr11_3364199_-SINEAluFLAM_C
CAediting_793290chr11_3364205_-SINEAluFLAM_C
CAediting_793291chr11_3364221_-SINEAluFLAM_C
CAediting_793292chr11_3366847_-SINEAluAluSz6
CAediting_793293chr11_3366873_-SINEAluAluSz6
CAediting_793294chr11_3366946_-SINEAluAluSz6
CAediting_793295chr11_3367815_-SINEAluAluSp
CAediting_793296chr11_3367855_-SINEAluAluSp
CAediting_793297chr11_3367909_-SINEAluAluSp
CAediting_793298chr11_3367925_-SINEAluAluSp
CAediting_793299chr11_3367941_-SINEAluAluSp
CAediting_793300chr11_3367991_-SINEAluAluSp
CAediting_793301chr11_3367992_-SINEAluAluSp
CAediting_793302chr11_3368037_-SINEAluAluSp
CAediting_793303chr11_3368372_-SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for ZNF195

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000005801.15.ZNF195.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000005801.15.ZNF195.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF195

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

check button Correlation between RNA A-to-I editing and gene expression.

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF195

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.
all structure


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The effects of the RNA editing to the miRNA binding sites for ZNF195

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000528218hsa-miR-1199-5p336183933618457mer-m833618383361857156.00-29.18
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000528218hsa-miR-6078336183533618428mer-1a33618353361854156.00-22.40
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000528218hsa-miR-6751-3p336183933618457mer-m833618383361858141.00-13.95
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000525313hsa-miR-1199-5p336183933618457mer-m833618383361857156.00-29.18
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000525313hsa-miR-6078336183533618428mer-1a33618353361854156.00-22.40
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000525313hsa-miR-6751-3p336183933618457mer-m833618383361858141.00-13.95
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000529228hsa-miR-1199-5p336183933618457mer-m833618383361857156.00-29.18
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000529228hsa-miR-6078336183533618428mer-1a33618353361854156.00-22.40
CAediting_793285chr11_3361839_-ENSG00000005801.15ENST00000529228hsa-miR-6751-3p336183933618457mer-m833618383361858141.00-13.95
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-28-5p336184733618537mer-m833618463361866155.00-19.51
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000528218hsa-miR-708-5p336184733618537mer-m833618463361867154.00-18.05
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-28-5p336184733618537mer-m833618463361866155.00-19.51
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000525313hsa-miR-708-5p336184733618537mer-m833618463361867154.00-18.05
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-28-5p336184733618537mer-m833618463361866155.00-19.51
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-3670336184933618557mer-m833618483361871150.00-14.67
CAediting_793286chr11_3361852_-ENSG00000005801.15ENST00000529228hsa-miR-708-5p336184733618537mer-m833618463361867154.00-18.05
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000528218hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000528218hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000525313hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000525313hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000529228hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45
CAediting_793287chr11_3361853_-ENSG00000005801.15ENST00000529228hsa-miR-1289336184833618547mer-m833618473361869156.00-25.45

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000528218hsa-miR-4478336181833618247mer-m833618173361832149-22.23
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000528218hsa-miR-4649-3p336182133618277mer-m833618203361840147-16.14
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000528218hsa-miR-485-5p336181733618237mer-m833618163361838145-15.24
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000528218hsa-miR-7160-5p336182033618267mer-m833618193361837150-20.62
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000525313hsa-miR-4478336181833618247mer-m833618173361832149-22.23
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000525313hsa-miR-4649-3p336182133618277mer-m833618203361840147-16.14
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000525313hsa-miR-485-5p336181733618237mer-m833618163361838145-15.24
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000525313hsa-miR-7160-5p336182033618267mer-m833618193361837150-20.62
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000529228hsa-miR-4478336181833618247mer-m833618173361832149-22.23
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000529228hsa-miR-4649-3p336182133618277mer-m833618203361840147-16.14
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000529228hsa-miR-485-5p336181733618237mer-m833618163361838145-15.24
CAediting_793283chr11_3361822_-ENSG00000005801.15ENST00000529228hsa-miR-7160-5p336182033618267mer-m833618193361837150-20.62

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000005801.15ENST00000528796hsa-miR-605-3p333927433392807mer-m833392733339293161-26.35
CAediting_86358chr1_109598906_+ENSG00000005801.15ENST00000528796hsa-miR-197-5p333972133397266mer33397113339733148-30.32
CAediting_1368054chr19_46709310_-ENSG00000005801.15ENST00000354599hsa-miR-320e335804133580466mer33580403358057146-20.85
CAediting_1368054chr19_46709310_-ENSG00000005801.15ENST00000343338hsa-miR-320e335804133580466mer33580403358057146-20.85
CAediting_1368054chr19_46709310_-ENSG00000005801.15ENST00000620374hsa-miR-320e335804133580466mer33580403358057146-20.85
CAediting_1160181chr17_7017644_-ENSG00000005801.15ENST00000438262hsa-miR-195-3p336012733601348mer-1a33601273360148141-8.18
CAediting_1399425chr20_1392958_-ENSG00000005801.15ENST00000438262hsa-miR-6869-5p336037333603797mer-m833603723360394148-22.69
CAediting_77128chr1_85133844_+ENSG00000005801.15ENST00000528218hsa-miR-4423-3p336177833617847mer-m833617773361797140-15.1
CAediting_1399425chr20_1392958_-ENSG00000005801.15ENST00000528218hsa-miR-6869-5p336037333603797mer-m833603723360394148-22.69
CAediting_77128chr1_85133844_+ENSG00000005801.15ENST00000525313hsa-miR-4423-3p336177833617847mer-m833617773361797140-15.1
CAediting_1399425chr20_1392958_-ENSG00000005801.15ENST00000525313hsa-miR-6869-5p336037333603797mer-m833603723360394148-22.69
CAediting_77128chr1_85133844_+ENSG00000005801.15ENST00000529228hsa-miR-4423-3p336177833617847mer-m833617773361797140-15.1
CAediting_1399425chr20_1392958_-ENSG00000005801.15ENST00000529228hsa-miR-6869-5p336037333603797mer-m833603723360394148-22.69
CAediting_468389chr6_31355314_-ENSG00000005801.15ENST00000528796hsa-miR-6891-5p333957333395797mer-m833395723339590152-21.36
CAediting_468389chr6_31355314_-ENSG00000005801.15ENST00000528796hsa-miR-6891-5p333950133395066mer33395003339518145-20.56
CAediting_468389chr6_31355314_-ENSG00000005801.15ENST00000354599hsa-miR-6891-5p335797533579817mer-m833579743357992143-18.53
CAediting_468389chr6_31355314_-ENSG00000005801.15ENST00000343338hsa-miR-6891-5p335797533579817mer-m833579743357992143-18.53
CAediting_468389chr6_31355314_-ENSG00000005801.15ENST00000620374hsa-miR-6891-5p335797533579817mer-m833579743357992143-18.53

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF195

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for ZNF195

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for ZNF195

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for ZNF195

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for ZNF195

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for ZNF195

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource