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Editing gene: ZNF180 (CAeditome ID:7733)

Gene summary for ZNF180

Gene summary

Gene information	Gene symbol	ZNF180
	Gene ID	7733
	Gene name	zinc finger protein 180
	Synonyms	HHZ168
	Cytomap	19q13.31
	Type of gene	protein-coding
	Description	zinc finger protein 180
	Modification date	20210518
	UniProtAcc	Q9UJW8
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF180

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000167384.9

RNA A-to-I editing events in Cancer.

CAediting_1360111(44476646, -), CAediting_1360112(44476673, -), CAediting_1360113(44476674, -), CAediting_1360114(44476722, -), CAediting_1360115(44476742, -), CAediting_1360116(44476743, -), CAediting_1360117(44476756, -), CAediting_1360118(44476757, -), CAediting_1360119(44476773, -), CAediting_1360120(44476851, -), CAediting_1360121(44476974, -), CAediting_1360122(44476995, -), CAediting_1360123(44477011, -), CAediting_1360124(44477025, -), CAediting_1360125(44477028, -), CAediting_1360126(44477029, -), CAediting_1360127(44477112, -), CAediting_1360128(44477113, -), CAediting_1360129(44477196, -), CAediting_1360130(44477246, -), CAediting_1360131(44477247, -), CAediting_1360132(44477253, -), CAediting_1360133(44480313, -), CAediting_1360134(44482123, -), CAediting_1360135(44482126, -), CAediting_1360136(44482134, -), CAediting_1360137(44482140, -), CAediting_1360138(44482195, -), CAediting_1360139(44482207, -), CAediting_1360140(44482232, -), CAediting_1360141(44484091, -), CAediting_1360142(44484133, -), CAediting_1360143(44484159, -), CAediting_1360144(44484165, -), CAediting_1360145(44484203, -), CAediting_1360146(44486796, -), CAediting_1360147(44486797, -), CAediting_1360148(44487005, -), CAediting_1360149(44487109, -), CAediting_1360150(44487112, -), CAediting_1360151(44491644, -), CAediting_1360152(44491805, -), CAediting_1360153(44491845, -), CAediting_1360154(44494550, -), CAediting_1360155(44494615, -), CAediting_1360156(44494637, -), CAediting_1360157(44496092, -), CAediting_1360158(44496134, -), CAediting_1360159(44496159, -), CAediting_1360160(44496418, -), CAediting_1360161(44496461, -), CAediting_1360162(44496484, -), CAediting_1360163(44496500, -),

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RNA editing positional annotations for ZNF180 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1360111	chr19_44476646_-	nonsynonymous SNV	ENST00000221327.7	c.A1835G	p.K612R	T	P	D
CAediting_1360111	chr19_44476646_-	nonsynonymous SNV	ENST00000391956.7	c.A1760G	p.K587R	T	P	D
CAediting_1360111	chr19_44476646_-	nonsynonymous SNV	ENST00000592529.4	c.A1754G	p.K585R	T	P	D
CAediting_1360112	chr19_44476673_-	nonsynonymous SNV	ENST00000221327.7	c.A1808G	p.K603R	D	B	D
CAediting_1360112	chr19_44476673_-	nonsynonymous SNV	ENST00000391956.7	c.A1733G	p.K578R	D	B	D
CAediting_1360112	chr19_44476673_-	nonsynonymous SNV	ENST00000592529.4	c.A1727G	p.K576R	D	B	D
CAediting_1360113	chr19_44476674_-	nonsynonymous SNV	ENST00000221327.7	c.A1807G	p.K603E	D	D	D
CAediting_1360113	chr19_44476674_-	nonsynonymous SNV	ENST00000391956.7	c.A1732G	p.K578E	D	D	D
CAediting_1360113	chr19_44476674_-	nonsynonymous SNV	ENST00000592529.4	c.A1726G	p.K576E	D	D	D
CAediting_1360114	chr19_44476722_-	nonsynonymous SNV	ENST00000221327.7	c.A1759G	p.S587G	D	P	D
CAediting_1360114	chr19_44476722_-	nonsynonymous SNV	ENST00000391956.7	c.A1684G	p.S562G	D	P	D
CAediting_1360114	chr19_44476722_-	nonsynonymous SNV	ENST00000592529.4	c.A1678G	p.S560G	D	P	D
CAediting_1360115	chr19_44476742_-	nonsynonymous SNV	ENST00000221327.7	c.A1739G	p.N580S	T	B	D
CAediting_1360115	chr19_44476742_-	nonsynonymous SNV	ENST00000391956.7	c.A1664G	p.N555S	T	B	D
CAediting_1360115	chr19_44476742_-	nonsynonymous SNV	ENST00000592529.4	c.A1658G	p.N553S	T	B	D
CAediting_1360116	chr19_44476743_-	nonsynonymous SNV	ENST00000221327.7	c.A1738G	p.N580D	T	B	D
CAediting_1360116	chr19_44476743_-	nonsynonymous SNV	ENST00000391956.7	c.A1663G	p.N555D	T	B	D
CAediting_1360116	chr19_44476743_-	nonsynonymous SNV	ENST00000592529.4	c.A1657G	p.N553D	T	B	D
CAediting_1360118	chr19_44476757_-	nonsynonymous SNV	ENST00000221327.7	c.A1724G	p.K575R	D	P	D
CAediting_1360118	chr19_44476757_-	nonsynonymous SNV	ENST00000391956.7	c.A1649G	p.K550R	D	P	D
CAediting_1360118	chr19_44476757_-	nonsynonymous SNV	ENST00000592529.4	c.A1643G	p.K548R	D	P	D
CAediting_1360119	chr19_44476773_-	nonsynonymous SNV	ENST00000221327.7	c.A1708G	p.I570V	D	B	N
CAediting_1360119	chr19_44476773_-	nonsynonymous SNV	ENST00000391956.7	c.A1633G	p.I545V	D	B	N
CAediting_1360119	chr19_44476773_-	nonsynonymous SNV	ENST00000592529.4	c.A1627G	p.I543V	D	B	N
CAediting_1360120	chr19_44476851_-	nonsynonymous SNV	ENST00000221327.7	c.A1630G	p.T544A	D	B	D
CAediting_1360120	chr19_44476851_-	nonsynonymous SNV	ENST00000391956.7	c.A1555G	p.T519A	D	B	D
CAediting_1360120	chr19_44476851_-	nonsynonymous SNV	ENST00000592529.4	c.A1549G	p.T517A	D	B	D
CAediting_1360121	chr19_44476974_-	nonsynonymous SNV	ENST00000221327.7	c.A1507G	p.S503G	D	B	D
CAediting_1360121	chr19_44476974_-	nonsynonymous SNV	ENST00000391956.7	c.A1432G	p.S478G	D	B	D
CAediting_1360121	chr19_44476974_-	nonsynonymous SNV	ENST00000592529.4	c.A1426G	p.S476G	D	B	D
CAediting_1360125	chr19_44477028_-	nonsynonymous SNV	ENST00000221327.7	c.A1453G	p.R485G	D	D	D
CAediting_1360125	chr19_44477028_-	nonsynonymous SNV	ENST00000391956.7	c.A1378G	p.R460G	D	D	D
CAediting_1360125	chr19_44477028_-	nonsynonymous SNV	ENST00000592529.4	c.A1372G	p.R458G	D	D	D
CAediting_1360127	chr19_44477112_-	nonsynonymous SNV	ENST00000221327.7	c.A1369G	p.R457G	D	D	D
CAediting_1360127	chr19_44477112_-	nonsynonymous SNV	ENST00000391956.7	c.A1294G	p.R432G	D	D	D
CAediting_1360127	chr19_44477112_-	nonsynonymous SNV	ENST00000592529.4	c.A1288G	p.R430G	D	D	D
CAediting_1360129	chr19_44477196_-	nonsynonymous SNV	ENST00000221327.7	c.A1285G	p.R429G	D	D	D
CAediting_1360129	chr19_44477196_-	nonsynonymous SNV	ENST00000391956.7	c.A1210G	p.R404G	D	D	D
CAediting_1360129	chr19_44477196_-	nonsynonymous SNV	ENST00000592529.4	c.A1204G	p.R402G	D	D	D
CAediting_1360130	chr19_44477246_-	nonsynonymous SNV	ENST00000221327.7	c.A1235G	p.N412S	D	B	D
CAediting_1360130	chr19_44477246_-	nonsynonymous SNV	ENST00000391956.7	c.A1160G	p.N387S	D	B	D
CAediting_1360130	chr19_44477246_-	nonsynonymous SNV	ENST00000592529.4	c.A1154G	p.N385S	D	B	D
CAediting_1360131	chr19_44477247_-	nonsynonymous SNV	ENST00000221327.7	c.A1234G	p.N412D	T	B	D
CAediting_1360131	chr19_44477247_-	nonsynonymous SNV	ENST00000391956.7	c.A1159G	p.N387D	T	B	D
CAediting_1360131	chr19_44477247_-	nonsynonymous SNV	ENST00000592529.4	c.A1153G	p.N385D	T	B	D
CAediting_1360132	chr19_44477253_-	nonsynonymous SNV	ENST00000221327.7	c.A1228G	p.R410G	T	P	D
CAediting_1360132	chr19_44477253_-	nonsynonymous SNV	ENST00000391956.7	c.A1153G	p.R385G	T	P	D
CAediting_1360132	chr19_44477253_-	nonsynonymous SNV	ENST00000592529.4	c.A1147G	p.R383G	T	P	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1360111	chr19_44476646_-	exonic
CAediting_1360112	chr19_44476673_-	exonic
CAediting_1360113	chr19_44476674_-	exonic
CAediting_1360114	chr19_44476722_-	exonic
CAediting_1360115	chr19_44476742_-	exonic
CAediting_1360116	chr19_44476743_-	exonic
CAediting_1360117	chr19_44476756_-	exonic
CAediting_1360118	chr19_44476757_-	exonic
CAediting_1360119	chr19_44476773_-	exonic
CAediting_1360120	chr19_44476851_-	exonic
CAediting_1360121	chr19_44476974_-	exonic
CAediting_1360122	chr19_44476995_-	exonic
CAediting_1360123	chr19_44477011_-	exonic
CAediting_1360124	chr19_44477025_-	exonic
CAediting_1360125	chr19_44477028_-	exonic
CAediting_1360126	chr19_44477029_-	exonic
CAediting_1360127	chr19_44477112_-	exonic
CAediting_1360128	chr19_44477113_-	exonic
CAediting_1360129	chr19_44477196_-	exonic
CAediting_1360130	chr19_44477246_-	exonic
CAediting_1360131	chr19_44477247_-	exonic
CAediting_1360132	chr19_44477253_-	exonic
CAediting_1360133	chr19_44480313_-	ncRNA_intronic
CAediting_1360134	chr19_44482123_-	ncRNA_intronic
CAediting_1360135	chr19_44482126_-	ncRNA_intronic
CAediting_1360136	chr19_44482134_-	ncRNA_intronic
CAediting_1360137	chr19_44482140_-	ncRNA_intronic
CAediting_1360138	chr19_44482195_-	ncRNA_intronic
CAediting_1360139	chr19_44482207_-	ncRNA_intronic
CAediting_1360140	chr19_44482232_-	ncRNA_intronic
CAediting_1360141	chr19_44484091_-	ncRNA_intronic
CAediting_1360142	chr19_44484133_-	ncRNA_intronic
CAediting_1360143	chr19_44484159_-	ncRNA_intronic
CAediting_1360144	chr19_44484165_-	ncRNA_intronic
CAediting_1360145	chr19_44484203_-	ncRNA_intronic
CAediting_1360146	chr19_44486796_-	ncRNA_intronic
CAediting_1360147	chr19_44486797_-	ncRNA_intronic
CAediting_1360148	chr19_44487005_-	ncRNA_intronic
CAediting_1360149	chr19_44487109_-	ncRNA_intronic
CAediting_1360150	chr19_44487112_-	ncRNA_intronic
CAediting_1360151	chr19_44491644_-	ncRNA_intronic
CAediting_1360152	chr19_44491805_-	ncRNA_intronic
CAediting_1360153	chr19_44491845_-	ncRNA_intronic
CAediting_1360154	chr19_44494550_-	ncRNA_intronic
CAediting_1360155	chr19_44494615_-	ncRNA_intronic
CAediting_1360156	chr19_44494637_-	ncRNA_intronic
CAediting_1360157	chr19_44496092_-	ncRNA_intronic
CAediting_1360158	chr19_44496134_-	ncRNA_intronic
CAediting_1360159	chr19_44496159_-	ncRNA_intronic
CAediting_1360160	chr19_44496418_-	ncRNA_intronic
CAediting_1360161	chr19_44496461_-	ncRNA_intronic
CAediting_1360162	chr19_44496484_-	ncRNA_intronic
CAediting_1360163	chr19_44496500_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1360133	chr19_44480313_-	SINE	Alu	AluJr
CAediting_1360134	chr19_44482123_-	SINE	Alu	AluJb
CAediting_1360135	chr19_44482126_-	SINE	Alu	AluJb
CAediting_1360136	chr19_44482134_-	SINE	Alu	AluJb
CAediting_1360137	chr19_44482140_-	SINE	Alu	AluJb
CAediting_1360138	chr19_44482195_-	SINE	Alu	AluJb
CAediting_1360139	chr19_44482207_-	SINE	Alu	AluJb
CAediting_1360140	chr19_44482232_-	SINE	Alu	AluJb
CAediting_1360141	chr19_44484091_-	SINE	Alu	AluY
CAediting_1360142	chr19_44484133_-	SINE	Alu	AluY
CAediting_1360143	chr19_44484159_-	SINE	Alu	AluY
CAediting_1360144	chr19_44484165_-	SINE	Alu	AluY
CAediting_1360145	chr19_44484203_-	SINE	Alu	AluY
CAediting_1360146	chr19_44486796_-	SINE	Alu	AluSx
CAediting_1360147	chr19_44486797_-	SINE	Alu	AluSx
CAediting_1360148	chr19_44487005_-	SINE	Alu	AluSx
CAediting_1360149	chr19_44487109_-	SINE	Alu	AluJb
CAediting_1360150	chr19_44487112_-	SINE	Alu	AluJb
CAediting_1360151	chr19_44491644_-	SINE	Alu	AluJr
CAediting_1360152	chr19_44491805_-	SINE	Alu	AluJr
CAediting_1360153	chr19_44491845_-	SINE	Alu	AluJr
CAediting_1360154	chr19_44494550_-	SINE	Alu	AluJo
CAediting_1360155	chr19_44494615_-	SINE	Alu	AluJo
CAediting_1360156	chr19_44494637_-	SINE	Alu	AluJo
CAediting_1360157	chr19_44496092_-	SINE	Alu	AluJr
CAediting_1360158	chr19_44496134_-	SINE	Alu	AluJr
CAediting_1360159	chr19_44496159_-	SINE	Alu	AluJr
CAediting_1360160	chr19_44496418_-	SINE	Alu	AluJo
CAediting_1360161	chr19_44496461_-	SINE	Alu	AluJo
CAediting_1360162	chr19_44496484_-	SINE	Alu	AluJo
CAediting_1360163	chr19_44496500_-	SINE	Alu	AluJo

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RNA A-to-I editing events in the alternative splicing sites for ZNF180

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000167384.9.ZNF180.

Correlation between RNA A-to-I editing and PSI for ENSG00000167384.9.ZNF180.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF180

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF180

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF180

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000592095	hsa-miR-23a-3p	44476742	44476748	7mer-m8	44476741	44476761	155.00	-13.14
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000592095	hsa-miR-23b-3p	44476742	44476748	7mer-m8	44476741	44476763	150.00	-14.02
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000592095	hsa-miR-23c	44476742	44476748	7mer-m8	44476741	44476761	144.00	-8.92
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000590088	hsa-miR-23a-3p	44476742	44476748	7mer-m8	44476741	44476761	155.00	-13.14
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000590088	hsa-miR-23b-3p	44476742	44476748	7mer-m8	44476741	44476763	150.00	-14.02
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000590088	hsa-miR-23c	44476742	44476748	7mer-m8	44476741	44476761	144.00	-8.92
CAediting_1360131	chr19_44477247_-	ENSG00000167384.9	ENST00000592095	hsa-miR-1228-3p	44477246	44477253	8mer-1a	44477246	44477265	145.00	-17.43
CAediting_1360131	chr19_44477247_-	ENSG00000167384.9	ENST00000590088	hsa-miR-1228-3p	44477246	44477253	8mer-1a	44477246	44477265	145.00	-17.43
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000592095	hsa-miR-532-3p	44476646	44476652	7mer-m8	44476645	44476666	147.00	-24.94
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000592095	hsa-miR-6861-3p	44476642	44476648	7mer-m8	44476641	44476658	146.00	-16.68
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000590088	hsa-miR-532-3p	44476646	44476652	7mer-m8	44476645	44476666	147.00	-24.94
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000590088	hsa-miR-6861-3p	44476642	44476648	7mer-m8	44476641	44476658	146.00	-16.68
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4512	44476667	44476674	8mer-1a	44476667	44476688	147.00	-15.43
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4512	44476667	44476674	8mer-1a	44476667	44476688	147.00	-15.43
CAediting_1360117	chr19_44476756_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476754	44476760	7mer-m8	44476753	44476770	143.00	-14.04
CAediting_1360117	chr19_44476756_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476754	44476760	7mer-m8	44476753	44476770	143.00	-14.04
CAediting_1360117	chr19_44476756_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476754	44476760	7mer-m8	44476753	44476770	143.00	-14.04
CAediting_1360117	chr19_44476756_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476754	44476760	7mer-m8	44476753	44476770	143.00	-14.04
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4680-5p	44476769	44476776	8mer-1a	44476769	44476791	147.00	-11.99
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000592095	hsa-miR-6817-3p	44476773	44476779	7mer-m8	44476772	44476789	155.00	-19.90
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4680-5p	44476769	44476776	8mer-1a	44476769	44476791	147.00	-11.99
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000590088	hsa-miR-6817-3p	44476773	44476779	7mer-m8	44476772	44476789	155.00	-19.90
CAediting_1360123	chr19_44477011_-	ENSG00000167384.9	ENST00000592095	hsa-miR-629-3p	44477008	44477015	8mer-1a	44477008	44477028	150.00	-13.65
CAediting_1360123	chr19_44477011_-	ENSG00000167384.9	ENST00000590088	hsa-miR-629-3p	44477008	44477015	8mer-1a	44477008	44477028	150.00	-13.65
CAediting_1360128	chr19_44477113_-	ENSG00000167384.9	ENST00000592095	hsa-miR-2117	44477107	44477114	8mer-1a	44477107	44477129	144.00	-13.73
CAediting_1360128	chr19_44477113_-	ENSG00000167384.9	ENST00000590088	hsa-miR-2117	44477107	44477114	8mer-1a	44477107	44477129	144.00	-13.73
CAediting_1360118	chr19_44476757_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3124-3p	44476756	44476762	7mer-1a	44476756	44476774	144.00	-16.97
CAediting_1360118	chr19_44476757_-	ENSG00000167384.9	ENST00000592095	hsa-miR-6830-3p	44476755	44476761	7mer-m8	44476754	44476776	147.00	-11.90
CAediting_1360118	chr19_44476757_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3124-3p	44476756	44476762	7mer-1a	44476756	44476774	144.00	-16.97
CAediting_1360118	chr19_44476757_-	ENSG00000167384.9	ENST00000590088	hsa-miR-6830-3p	44476755	44476761	7mer-m8	44476754	44476776	147.00	-11.90
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4680-5p	44477021	44477028	8mer-1a	44477021	44477044	147.00	-14.37
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4680-5p	44477021	44477028	8mer-1a	44477021	44477044	147.00	-14.37
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000592095	hsa-miR-100-5p	44477250	44477256	7mer-m8	44477249	44477270	141.00	-15.35
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000592095	hsa-miR-99a-5p	44477250	44477256	7mer-m8	44477249	44477272	143.00	-15.97
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000592095	hsa-miR-99b-5p	44477250	44477256	7mer-m8	44477249	44477270	141.00	-18.00
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000590088	hsa-miR-100-5p	44477250	44477256	7mer-m8	44477249	44477270	141.00	-15.35
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000590088	hsa-miR-99a-5p	44477250	44477256	7mer-m8	44477249	44477272	143.00	-15.97
CAediting_1360132	chr19_44477253_-	ENSG00000167384.9	ENST00000590088	hsa-miR-99b-5p	44477250	44477256	7mer-m8	44477249	44477270	141.00	-18.00

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000592095	hsa-miR-10393-5p	44477021	44477028	8mer-1a	44477021	44477047	150	-6.01
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000592095	hsa-miR-199a-5p	44476846	44476853	8mer-1a	44476846	44476868	140	-12.32
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000592095	hsa-miR-199a-5p	44476846	44476853	8mer-1a	44476846	44476868	140	-12.32
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000592095	hsa-miR-199b-5p	44476846	44476853	8mer-1a	44476846	44476864	143	-12.12
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3064-5p	44476716	44476723	8mer-1a	44476716	44476735	145	-18.06
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3085-3p	44476716	44476723	8mer-1a	44476716	44476738	142	-20.47
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3158-3p	44476667	44476674	8mer-1a	44476667	44476687	150	-18.57
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3158-3p	44476667	44476674	8mer-1a	44476667	44476687	150	-18.57
CAediting_1360115	chr19_44476742_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3920	44476738	44476744	7mer-m8	44476737	44476758	150	-9.18
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000592095	hsa-miR-3920	44476738	44476744	7mer-m8	44476737	44476758	150	-9.18
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4302	44476848	44476854	7mer-m8	44476847	44476864	143	-16.88
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4452	44477021	44477027	7mer-m8	44477020	44477047	154	-16.39
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4452	44476769	44476775	7mer-m8	44476768	44476792	152	-12.1
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000592095	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000592095	hsa-miR-5571-5p	44476771	44476777	7mer-m8	44476770	44476790	141	-7.79
CAediting_1360129	chr19_44477196_-	ENSG00000167384.9	ENST00000592095	hsa-miR-5584-3p	44477191	44477197	7mer-m8	44477190	44477209	145	-11.62
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000592095	hsa-miR-627-3p	44476672	44476678	7mer-m8	44476671	44476689	144	-11.03
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000592095	hsa-miR-627-3p	44476672	44476678	7mer-m8	44476671	44476689	144	-11.03
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000592095	hsa-miR-6504-5p	44476716	44476723	8mer-1a	44476716	44476736	140	-19.23
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000592095	hsa-miR-8083	44476641	44476647	7mer-m8	44476640	44476665	148	-18.9
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000590088	hsa-miR-10393-5p	44477021	44477028	8mer-1a	44477021	44477047	150	-6.01
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000590088	hsa-miR-199a-5p	44476846	44476853	8mer-1a	44476846	44476868	140	-12.32
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000590088	hsa-miR-199a-5p	44476846	44476853	8mer-1a	44476846	44476868	140	-12.32
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000590088	hsa-miR-199b-5p	44476846	44476853	8mer-1a	44476846	44476864	143	-12.12
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3064-5p	44476716	44476723	8mer-1a	44476716	44476735	145	-18.06
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3085-3p	44476716	44476723	8mer-1a	44476716	44476738	142	-20.47
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3119	44476670	44476676	7mer-m8	44476669	44476688	146	-12.46
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3158-3p	44476667	44476674	8mer-1a	44476667	44476687	150	-18.57
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3158-3p	44476667	44476674	8mer-1a	44476667	44476687	150	-18.57
CAediting_1360115	chr19_44476742_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3920	44476738	44476744	7mer-m8	44476737	44476758	150	-9.18
CAediting_1360116	chr19_44476743_-	ENSG00000167384.9	ENST00000590088	hsa-miR-3920	44476738	44476744	7mer-m8	44476737	44476758	150	-9.18
CAediting_1360120	chr19_44476851_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4302	44476848	44476854	7mer-m8	44476847	44476864	143	-16.88
CAediting_1360124	chr19_44477025_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4452	44477021	44477027	7mer-m8	44477020	44477047	154	-16.39
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4452	44476769	44476775	7mer-m8	44476768	44476792	152	-12.1
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360121	chr19_44476974_-	ENSG00000167384.9	ENST00000590088	hsa-miR-4509	44476973	44476979	7mer-m8	44476972	44476993	152	-13.93
CAediting_1360119	chr19_44476773_-	ENSG00000167384.9	ENST00000590088	hsa-miR-5571-5p	44476771	44476777	7mer-m8	44476770	44476790	141	-7.79
CAediting_1360129	chr19_44477196_-	ENSG00000167384.9	ENST00000590088	hsa-miR-5584-3p	44477191	44477197	7mer-m8	44477190	44477209	145	-11.62
CAediting_1360112	chr19_44476673_-	ENSG00000167384.9	ENST00000590088	hsa-miR-627-3p	44476672	44476678	7mer-m8	44476671	44476689	144	-11.03
CAediting_1360113	chr19_44476674_-	ENSG00000167384.9	ENST00000590088	hsa-miR-627-3p	44476672	44476678	7mer-m8	44476671	44476689	144	-11.03
CAediting_1360114	chr19_44476722_-	ENSG00000167384.9	ENST00000590088	hsa-miR-6504-5p	44476716	44476723	8mer-1a	44476716	44476736	140	-19.23
CAediting_1360111	chr19_44476646_-	ENSG00000167384.9	ENST00000590088	hsa-miR-8083	44476641	44476647	7mer-m8	44476640	44476665	148	-18.9

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000167384.9	ENST00000221327	hsa-miR-548aa	44475434	44475441	8mer-1a	44475434	44475458	140	-10.6
CAediting_1229414	chr17_67471546_+	ENSG00000167384.9	ENST00000221327	hsa-miR-548aa	44474688	44474694	7mer-m8	44474687	44474708	143	-12.9
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000221327	hsa-miR-641	44476260	44476266	7mer-1a	44476260	44476283	140	-17.82
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000391956	hsa-miR-641	44476260	44476266	7mer-1a	44476260	44476283	140	-17.82
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000592095	hsa-miR-641	44476260	44476266	7mer-1a	44476260	44476283	140	-17.82
CAediting_228905	chr2_188297554_+	ENSG00000167384.9	ENST00000592095	hsa-miR-561-3p	44476415	44476422	8mer-1a	44476415	44476436	140	-8.92
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000590088	hsa-miR-641	44476260	44476266	7mer-1a	44476260	44476283	140	-17.82
CAediting_228905	chr2_188297554_+	ENSG00000167384.9	ENST00000590088	hsa-miR-561-3p	44476415	44476422	8mer-1a	44476415	44476436	140	-8.92
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000592529	hsa-miR-641	44476260	44476266	7mer-1a	44476260	44476283	140	-17.82

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_117844	chr1_162342605_+	ENSG00000167384.9	ENST00000221327	hsa-miR-556-3p	44475075	44475082	8mer-1a	44475075	44475096	147	-9.6
CAediting_1351755	chr19_40282625_-	ENSG00000167384.9	ENST00000221327	hsa-miR-641	44475155	44475161	7mer-m8	44475154	44475178	150	-13.1

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF180

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF180

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for ZNF180

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for ZNF180

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF180

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF180

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene