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![]() | Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples |
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![]() | The effects of the RNA editing to the stability of the RNA structures |
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Editing gene: ZNF177 (CAeditome ID:7730) |
Gene summary for ZNF177 |
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Gene information | Gene symbol | ZNF177 | Gene ID | 7730 |
Gene name | zinc finger protein 177 | |
Synonyms | PIGX | |
Cytomap | 19p13.2 | |
Type of gene | protein-coding | |
Description | zinc finger protein 177 | |
Modification date | 20210518 | |
UniProtAcc | Q13360 | |
Context |
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Gene | GO ID | GO term | PubMed ID |
ZNF177 | GO:1990837 | Zinc finger protein 177 | 28473536 |
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RNA A-to-I events for ZNF177 |
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CAediting_1288250(9366038, +), CAediting_1288251(9367226, +), CAediting_1288252(9376225, +), CAediting_1288253(9376340, +), CAediting_1288254(9376351, +), CAediting_1288255(9381456, +), CAediting_1288256(9381481, +), |
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RNA editing positional annotations for ZNF177 using Annovar |
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CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
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CAeditome ID | Position | Variant type |
CAediting_1288250 | chr19_9366038_+ | ncRNA_intronic |
CAediting_1288251 | chr19_9367226_+ | ncRNA_intronic |
CAediting_1288252 | chr19_9376225_+ | ncRNA_intronic |
CAediting_1288253 | chr19_9376340_+ | exonic |
CAediting_1288254 | chr19_9376351_+ | exonic |
CAediting_1288255 | chr19_9381456_+ | exonic |
CAediting_1288256 | chr19_9381481_+ | exonic |
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CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_1288250 | chr19_9366038_+ | SINE | Alu | AluSc |
CAediting_1288251 | chr19_9367226_+ | SINE | Alu | AluSc8 |
CAediting_1288252 | chr19_9376225_+ | SINE | Alu | AluJr |
CAediting_1288253 | chr19_9376340_+ | SINE | Alu | AluJr |
CAediting_1288254 | chr19_9376351_+ | SINE | Alu | AluJr |
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RNA A-to-I editing events in the alternative splicing sites for ZNF177 |
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AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF177 |
![]() * The grey color means N/A. |
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Protein coding region RNA A-to-I editings for ZNF177 |
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The effects of the RNA editing to the miRNA binding sites for ZNF177 |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1229414 | chr17_67471546_+ | ENSG00000188629.10 | ENST00000343499 | hsa-miR-548aa | 9382040 | 9382046 | 7mer-m8 | 9382024 | 9382047 | 153 | -11.87 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000188629.10 | ENST00000589262 | hsa-miR-548aa | 9382040 | 9382046 | 7mer-m8 | 9382024 | 9382047 | 153 | -11.87 |
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CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
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The effects of the RNA editing to the stability of the RNA structures for ZNF177 |
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ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
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CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
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Relation with ADAR for ZNF177 |
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Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
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Relation with cancer stages for ZNF177 |
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Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
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Relation with survival for ZNF177 |
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Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for ZNF177 |
![]() (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for ZNF177 |
![]() (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
ZNF177 | C0024623 | Malignant neoplasm of stomach | 1 | CTD_human |
ZNF177 | C0038356 | Stomach Neoplasms | 1 | CTD_human |
ZNF177 | C1708349 | Hereditary Diffuse Gastric Cancer | 1 | CTD_human |