Home

Download

Statistics

Examples

Help

Contact

Editing gene: ZNF90 (CAeditome ID:7643)

Gene summary for ZNF90

Gene summary

Gene information	Gene symbol	ZNF90
	Gene ID	7643
	Gene name	zinc finger protein 90
	Synonyms	HTF9
	Cytomap	19p12
	Type of gene	protein-coding
	Description	zinc finger protein 90zinc finger protein HTF9
	Modification date	20210518
	UniProtAcc	Q03938
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

Top

RNA A-to-I events for ZNF90

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000213988.8

RNA A-to-I editing events in Cancer.

CAediting_1323684(20078954, +), CAediting_1323685(20078958, +), CAediting_1323686(20078998, +), CAediting_1323687(20079004, +), CAediting_1323688(20079039, +), CAediting_1323689(20079051, +), CAediting_1323690(20108409, +), CAediting_1323691(20108436, +), CAediting_1323692(20108449, +), CAediting_1323693(20108455, +), CAediting_1323694(20108475, +), CAediting_1323695(20108592, +), CAediting_1323696(20108780, +), CAediting_1323697(20108856, +), CAediting_1323698(20108866, +), CAediting_1323699(20109618, +), CAediting_1323700(20109619, +), CAediting_1323701(20109665, +), CAediting_1323702(20109666, +), CAediting_1323703(20109739, +), CAediting_1323704(20109751, +), CAediting_1323705(20111346, +), CAediting_1323706(20111361, +), CAediting_1323707(20111364, +), CAediting_1323708(20111473, +), CAediting_1323709(20112479, +), CAediting_1323710(20112565, +), CAediting_1323711(20113209, +), CAediting_1323712(20113232, +), CAediting_1323713(20113242, +), CAediting_1323714(20113245, +), CAediting_1323715(20113250, +), CAediting_1323716(20113258, +), CAediting_1323717(20113317, +), CAediting_1323718(20113320, +), CAediting_1323719(20113376, +), CAediting_1323720(20113378, +), CAediting_1323721(20113440, +), CAediting_1323722(20113455, +), CAediting_1323723(20113466, +), CAediting_1323724(20113580, +), CAediting_1323725(20113622, +), CAediting_1323726(20113662, +), CAediting_1323727(20113668, +), CAediting_1323728(20113707, +), CAediting_1323729(20113713, +), CAediting_1323730(20113720, +), CAediting_1323731(20113734, +), CAediting_1323732(20114010, +), CAediting_1323733(20114052, +), CAediting_1323734(20114068, +), CAediting_1323735(20114075, +), CAediting_1323736(20114076, +), CAediting_1323737(20114084, +), CAediting_1323738(20114134, +), CAediting_1323739(20114137, +), CAediting_1323740(20114140, +), CAediting_1323741(20114144, +), CAediting_1323742(20114148, +), CAediting_1323743(20114149, +), CAediting_1323744(20114164, +), CAediting_1323745(20114170, +), CAediting_1323746(20114171, +), CAediting_1323747(20114184, +), CAediting_1323748(20114193, +), CAediting_1323749(20114210, +), CAediting_1323750(20114211, +), CAediting_1323751(20114212, +), CAediting_1323752(20114220, +), CAediting_1323753(20114232, +), CAediting_1323754(20114237, +), CAediting_1323755(20114256, +), CAediting_1323756(20115973, +), CAediting_1323757(20115974, +), CAediting_1323758(20115991, +), CAediting_1323759(20116003, +), CAediting_1323760(20116263, +), CAediting_1323761(20116269, +), CAediting_1323762(20116270, +), CAediting_1323763(20116273, +), CAediting_1323764(20116295, +), CAediting_1323765(20116296, +), CAediting_1323766(20116299, +), CAediting_1323767(20116309, +), CAediting_1323768(20116353, +), CAediting_1323769(20117120, +), CAediting_1323770(20117142, +), CAediting_1323771(20117147, +), CAediting_1323772(20117160, +), CAediting_1323773(20117169, +), CAediting_1323774(20117172, +), CAediting_1323775(20117176, +), CAediting_1323776(20117182, +), CAediting_1323777(20117188, +), CAediting_1323778(20117208, +), CAediting_1323779(20117229, +), CAediting_1323780(20117287, +), CAediting_1323781(20117320, +), CAediting_1323782(20117537, +), CAediting_1323783(20117538, +), CAediting_1323784(20119720, +), CAediting_1323785(20119724, +), CAediting_1323786(20119797, +), CAediting_1323787(20121258, +), CAediting_1323788(20121264, +), CAediting_1323789(20121283, +), CAediting_1323790(20121297, +), CAediting_1323791(20121298, +), CAediting_1323792(20121303, +), CAediting_1323793(20121304, +), CAediting_1323794(20121308, +), CAediting_1323795(20121345, +), CAediting_1323796(20121386, +), CAediting_1323797(20121395, +), CAediting_1323798(20121416, +), CAediting_1323799(20121974, +), CAediting_1323800(20122020, +), CAediting_1323801(20122021, +), CAediting_1323802(20122028, +), CAediting_1323803(20122034, +), CAediting_1323804(20122043, +), CAediting_1323805(20122046, +), CAediting_1323806(20122080, +), CAediting_1323807(20122084, +), CAediting_1323808(20122090, +), CAediting_1323809(20122113, +), CAediting_1323810(20122124, +), CAediting_1323811(20122130, +), CAediting_1323812(20122131, +), CAediting_1323813(20122149, +), CAediting_1323814(20122167, +), CAediting_1323815(20122170, +),

Top

RNA editing positional annotations for ZNF90 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1323684	chr19_20078954_+	ncRNA_intronic
CAediting_1323685	chr19_20078958_+	ncRNA_intronic
CAediting_1323686	chr19_20078998_+	ncRNA_intronic
CAediting_1323687	chr19_20079004_+	ncRNA_intronic
CAediting_1323688	chr19_20079039_+	ncRNA_intronic
CAediting_1323689	chr19_20079051_+	ncRNA_intronic
CAediting_1323690	chr19_20108409_+	ncRNA_intronic
CAediting_1323691	chr19_20108436_+	ncRNA_intronic
CAediting_1323692	chr19_20108449_+	ncRNA_intronic
CAediting_1323693	chr19_20108455_+	ncRNA_intronic
CAediting_1323694	chr19_20108475_+	ncRNA_intronic
CAediting_1323695	chr19_20108592_+	ncRNA_intronic
CAediting_1323696	chr19_20108780_+	ncRNA_intronic
CAediting_1323697	chr19_20108856_+	ncRNA_intronic
CAediting_1323698	chr19_20108866_+	ncRNA_intronic
CAediting_1323699	chr19_20109618_+	ncRNA_intronic
CAediting_1323700	chr19_20109619_+	ncRNA_intronic
CAediting_1323701	chr19_20109665_+	ncRNA_intronic
CAediting_1323702	chr19_20109666_+	ncRNA_intronic
CAediting_1323703	chr19_20109739_+	ncRNA_intronic
CAediting_1323704	chr19_20109751_+	ncRNA_intronic
CAediting_1323705	chr19_20111346_+	ncRNA_intronic
CAediting_1323706	chr19_20111361_+	ncRNA_intronic
CAediting_1323707	chr19_20111364_+	ncRNA_intronic
CAediting_1323708	chr19_20111473_+	ncRNA_intronic
CAediting_1323709	chr19_20112479_+	ncRNA_intronic
CAediting_1323710	chr19_20112565_+	ncRNA_intronic
CAediting_1323711	chr19_20113209_+	ncRNA_intronic
CAediting_1323712	chr19_20113232_+	ncRNA_intronic
CAediting_1323713	chr19_20113242_+	ncRNA_intronic
CAediting_1323714	chr19_20113245_+	ncRNA_intronic
CAediting_1323715	chr19_20113250_+	ncRNA_intronic
CAediting_1323716	chr19_20113258_+	ncRNA_intronic
CAediting_1323717	chr19_20113317_+	ncRNA_intronic
CAediting_1323718	chr19_20113320_+	ncRNA_intronic
CAediting_1323719	chr19_20113376_+	ncRNA_intronic
CAediting_1323720	chr19_20113378_+	ncRNA_intronic
CAediting_1323721	chr19_20113440_+	ncRNA_intronic
CAediting_1323722	chr19_20113455_+	ncRNA_intronic
CAediting_1323723	chr19_20113466_+	ncRNA_intronic
CAediting_1323724	chr19_20113580_+	ncRNA_intronic
CAediting_1323725	chr19_20113622_+	ncRNA_intronic
CAediting_1323726	chr19_20113662_+	ncRNA_intronic
CAediting_1323727	chr19_20113668_+	ncRNA_intronic
CAediting_1323728	chr19_20113707_+	ncRNA_intronic
CAediting_1323729	chr19_20113713_+	ncRNA_intronic
CAediting_1323730	chr19_20113720_+	ncRNA_intronic
CAediting_1323731	chr19_20113734_+	ncRNA_intronic
CAediting_1323732	chr19_20114010_+	ncRNA_intronic
CAediting_1323733	chr19_20114052_+	ncRNA_intronic
CAediting_1323734	chr19_20114068_+	ncRNA_intronic
CAediting_1323735	chr19_20114075_+	ncRNA_intronic
CAediting_1323736	chr19_20114076_+	ncRNA_intronic
CAediting_1323737	chr19_20114084_+	ncRNA_intronic
CAediting_1323738	chr19_20114134_+	ncRNA_intronic
CAediting_1323739	chr19_20114137_+	ncRNA_intronic
CAediting_1323740	chr19_20114140_+	ncRNA_intronic
CAediting_1323741	chr19_20114144_+	ncRNA_intronic
CAediting_1323742	chr19_20114148_+	ncRNA_intronic
CAediting_1323743	chr19_20114149_+	ncRNA_intronic
CAediting_1323744	chr19_20114164_+	ncRNA_intronic
CAediting_1323745	chr19_20114170_+	ncRNA_intronic
CAediting_1323746	chr19_20114171_+	ncRNA_intronic
CAediting_1323747	chr19_20114184_+	ncRNA_intronic
CAediting_1323748	chr19_20114193_+	ncRNA_intronic
CAediting_1323749	chr19_20114210_+	ncRNA_intronic
CAediting_1323750	chr19_20114211_+	ncRNA_intronic
CAediting_1323751	chr19_20114212_+	ncRNA_intronic
CAediting_1323752	chr19_20114220_+	ncRNA_intronic
CAediting_1323753	chr19_20114232_+	ncRNA_intronic
CAediting_1323754	chr19_20114237_+	ncRNA_intronic
CAediting_1323755	chr19_20114256_+	ncRNA_intronic
CAediting_1323756	chr19_20115973_+	ncRNA_intronic
CAediting_1323757	chr19_20115974_+	ncRNA_intronic
CAediting_1323758	chr19_20115991_+	ncRNA_intronic
CAediting_1323759	chr19_20116003_+	ncRNA_intronic
CAediting_1323760	chr19_20116263_+	ncRNA_intronic
CAediting_1323761	chr19_20116269_+	ncRNA_intronic
CAediting_1323762	chr19_20116270_+	ncRNA_intronic
CAediting_1323763	chr19_20116273_+	ncRNA_intronic
CAediting_1323764	chr19_20116295_+	ncRNA_intronic
CAediting_1323765	chr19_20116296_+	ncRNA_intronic
CAediting_1323766	chr19_20116299_+	ncRNA_intronic
CAediting_1323767	chr19_20116309_+	ncRNA_intronic
CAediting_1323768	chr19_20116353_+	ncRNA_intronic
CAediting_1323769	chr19_20117120_+	ncRNA_intronic
CAediting_1323770	chr19_20117142_+	ncRNA_intronic
CAediting_1323771	chr19_20117147_+	ncRNA_intronic
CAediting_1323772	chr19_20117160_+	ncRNA_intronic
CAediting_1323773	chr19_20117169_+	ncRNA_intronic
CAediting_1323774	chr19_20117172_+	ncRNA_intronic
CAediting_1323775	chr19_20117176_+	ncRNA_intronic
CAediting_1323776	chr19_20117182_+	ncRNA_intronic
CAediting_1323777	chr19_20117188_+	ncRNA_intronic
CAediting_1323778	chr19_20117208_+	ncRNA_intronic
CAediting_1323779	chr19_20117229_+	ncRNA_intronic
CAediting_1323780	chr19_20117287_+	ncRNA_intronic
CAediting_1323781	chr19_20117320_+	ncRNA_intronic
CAediting_1323782	chr19_20117537_+	ncRNA_intronic
CAediting_1323783	chr19_20117538_+	ncRNA_intronic
CAediting_1323784	chr19_20119720_+	ncRNA_intronic
CAediting_1323785	chr19_20119724_+	ncRNA_intronic
CAediting_1323786	chr19_20119797_+	ncRNA_intronic
CAediting_1323787	chr19_20121258_+	exonic
CAediting_1323788	chr19_20121264_+	exonic
CAediting_1323789	chr19_20121283_+	exonic
CAediting_1323790	chr19_20121297_+	exonic
CAediting_1323791	chr19_20121298_+	exonic
CAediting_1323792	chr19_20121303_+	exonic
CAediting_1323793	chr19_20121304_+	exonic
CAediting_1323794	chr19_20121308_+	exonic
CAediting_1323795	chr19_20121345_+	ncRNA_exonic
CAediting_1323796	chr19_20121386_+	ncRNA_intronic
CAediting_1323797	chr19_20121395_+	ncRNA_intronic
CAediting_1323798	chr19_20121416_+	ncRNA_intronic
CAediting_1323799	chr19_20121974_+	ncRNA_intronic
CAediting_1323800	chr19_20122020_+	ncRNA_intronic
CAediting_1323801	chr19_20122021_+	ncRNA_intronic
CAediting_1323802	chr19_20122028_+	ncRNA_intronic
CAediting_1323803	chr19_20122034_+	ncRNA_intronic
CAediting_1323804	chr19_20122043_+	ncRNA_intronic
CAediting_1323805	chr19_20122046_+	ncRNA_intronic
CAediting_1323806	chr19_20122080_+	ncRNA_intronic
CAediting_1323807	chr19_20122084_+	ncRNA_intronic
CAediting_1323808	chr19_20122090_+	ncRNA_intronic
CAediting_1323809	chr19_20122113_+	ncRNA_intronic
CAediting_1323810	chr19_20122124_+	ncRNA_intronic
CAediting_1323811	chr19_20122130_+	ncRNA_intronic
CAediting_1323812	chr19_20122131_+	ncRNA_intronic
CAediting_1323813	chr19_20122149_+	ncRNA_intronic
CAediting_1323814	chr19_20122167_+	ncRNA_intronic
CAediting_1323815	chr19_20122170_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1323684	chr19_20078954_+	SINE	Alu	AluSg
CAediting_1323685	chr19_20078958_+	SINE	Alu	AluSg
CAediting_1323686	chr19_20078998_+	SINE	Alu	AluSg
CAediting_1323687	chr19_20079004_+	SINE	Alu	AluSg
CAediting_1323688	chr19_20079039_+	SINE	Alu	AluSg
CAediting_1323689	chr19_20079051_+	SINE	Alu	AluSg
CAediting_1323690	chr19_20108409_+	SINE	Alu	AluSx1
CAediting_1323691	chr19_20108436_+	SINE	Alu	AluSx1
CAediting_1323692	chr19_20108449_+	SINE	Alu	AluSx1
CAediting_1323693	chr19_20108455_+	SINE	Alu	AluSx1
CAediting_1323694	chr19_20108475_+	SINE	Alu	AluSx1
CAediting_1323695	chr19_20108592_+	SINE	Alu	AluSx1
CAediting_1323696	chr19_20108780_+	SINE	Alu	AluSx4
CAediting_1323697	chr19_20108856_+	SINE	Alu	AluSx4
CAediting_1323698	chr19_20108866_+	SINE	Alu	AluSx4
CAediting_1323699	chr19_20109618_+	SINE	Alu	AluJr
CAediting_1323700	chr19_20109619_+	SINE	Alu	AluJr
CAediting_1323701	chr19_20109665_+	SINE	Alu	AluJr
CAediting_1323702	chr19_20109666_+	SINE	Alu	AluJr
CAediting_1323703	chr19_20109739_+	SINE	Alu	AluJr
CAediting_1323704	chr19_20109751_+	SINE	Alu	AluJr
CAediting_1323705	chr19_20111346_+	SINE	Alu	AluJb
CAediting_1323706	chr19_20111361_+	SINE	Alu	AluJb
CAediting_1323707	chr19_20111364_+	SINE	Alu	AluJb
CAediting_1323708	chr19_20111473_+	SINE	Alu	AluJb
CAediting_1323709	chr19_20112479_+	SINE	Alu	AluSx
CAediting_1323710	chr19_20112565_+	SINE	Alu	AluSx
CAediting_1323711	chr19_20113209_+	SINE	Alu	AluSq2
CAediting_1323712	chr19_20113232_+	SINE	Alu	AluSq2
CAediting_1323713	chr19_20113242_+	SINE	Alu	AluSq2
CAediting_1323714	chr19_20113245_+	SINE	Alu	AluSq2
CAediting_1323715	chr19_20113250_+	SINE	Alu	AluSq2
CAediting_1323716	chr19_20113258_+	SINE	Alu	AluSq2
CAediting_1323717	chr19_20113317_+	SINE	Alu	AluSq2
CAediting_1323718	chr19_20113320_+	SINE	Alu	AluSq2
CAediting_1323719	chr19_20113376_+	SINE	Alu	AluSq2
CAediting_1323720	chr19_20113378_+	SINE	Alu	AluSq2
CAediting_1323721	chr19_20113440_+	SINE	Alu	AluSq2
CAediting_1323722	chr19_20113455_+	SINE	Alu	AluSq2
CAediting_1323723	chr19_20113466_+	SINE	Alu	AluSq2
CAediting_1323724	chr19_20113580_+	SINE	Alu	AluY
CAediting_1323725	chr19_20113622_+	SINE	Alu	AluY
CAediting_1323726	chr19_20113662_+	SINE	Alu	AluY
CAediting_1323727	chr19_20113668_+	SINE	Alu	AluY
CAediting_1323728	chr19_20113707_+	SINE	Alu	AluY
CAediting_1323729	chr19_20113713_+	SINE	Alu	AluY
CAediting_1323730	chr19_20113720_+	SINE	Alu	AluY
CAediting_1323731	chr19_20113734_+	SINE	Alu	AluY
CAediting_1323733	chr19_20114052_+	SINE	Alu	AluSc8
CAediting_1323734	chr19_20114068_+	SINE	Alu	AluSc8
CAediting_1323735	chr19_20114075_+	SINE	Alu	AluSc8
CAediting_1323736	chr19_20114076_+	SINE	Alu	AluSc8
CAediting_1323737	chr19_20114084_+	SINE	Alu	AluSc8
CAediting_1323738	chr19_20114134_+	SINE	Alu	AluSc8
CAediting_1323739	chr19_20114137_+	SINE	Alu	AluSc8
CAediting_1323740	chr19_20114140_+	SINE	Alu	AluSc8
CAediting_1323741	chr19_20114144_+	SINE	Alu	AluSc8
CAediting_1323742	chr19_20114148_+	SINE	Alu	AluSc8
CAediting_1323743	chr19_20114149_+	SINE	Alu	AluSc8
CAediting_1323744	chr19_20114164_+	SINE	Alu	AluSc8
CAediting_1323745	chr19_20114170_+	SINE	Alu	AluSc8
CAediting_1323746	chr19_20114171_+	SINE	Alu	AluSc8
CAediting_1323747	chr19_20114184_+	SINE	Alu	AluSc8
CAediting_1323748	chr19_20114193_+	SINE	Alu	AluSc8
CAediting_1323749	chr19_20114210_+	SINE	Alu	AluSc8
CAediting_1323750	chr19_20114211_+	SINE	Alu	AluSc8
CAediting_1323751	chr19_20114212_+	SINE	Alu	AluSc8
CAediting_1323752	chr19_20114220_+	SINE	Alu	AluSc8
CAediting_1323753	chr19_20114232_+	SINE	Alu	AluSc8
CAediting_1323754	chr19_20114237_+	SINE	Alu	AluSc8
CAediting_1323755	chr19_20114256_+	SINE	Alu	AluSc8
CAediting_1323756	chr19_20115973_+	SINE	Alu	AluSz
CAediting_1323757	chr19_20115974_+	SINE	Alu	AluSz
CAediting_1323758	chr19_20115991_+	SINE	Alu	AluSz
CAediting_1323759	chr19_20116003_+	SINE	Alu	AluSz
CAediting_1323760	chr19_20116263_+	SINE	Alu	AluSx
CAediting_1323761	chr19_20116269_+	SINE	Alu	AluSx
CAediting_1323762	chr19_20116270_+	SINE	Alu	AluSx
CAediting_1323763	chr19_20116273_+	SINE	Alu	AluSx
CAediting_1323764	chr19_20116295_+	SINE	Alu	AluSx
CAediting_1323765	chr19_20116296_+	SINE	Alu	AluSx
CAediting_1323766	chr19_20116299_+	SINE	Alu	AluSx
CAediting_1323767	chr19_20116309_+	SINE	Alu	AluSx
CAediting_1323768	chr19_20116353_+	SINE	Alu	AluSx
CAediting_1323769	chr19_20117120_+	SINE	Alu	AluSx1
CAediting_1323770	chr19_20117142_+	SINE	Alu	AluSx1
CAediting_1323771	chr19_20117147_+	SINE	Alu	AluSx1
CAediting_1323772	chr19_20117160_+	SINE	Alu	AluSx1
CAediting_1323773	chr19_20117169_+	SINE	Alu	AluSx1
CAediting_1323774	chr19_20117172_+	SINE	Alu	AluSx1
CAediting_1323775	chr19_20117176_+	SINE	Alu	AluSx1
CAediting_1323776	chr19_20117182_+	SINE	Alu	AluSx1
CAediting_1323777	chr19_20117188_+	SINE	Alu	AluSx1
CAediting_1323778	chr19_20117208_+	SINE	Alu	AluSx1
CAediting_1323779	chr19_20117229_+	SINE	Alu	AluSx1
CAediting_1323780	chr19_20117287_+	SINE	Alu	AluSx1
CAediting_1323781	chr19_20117320_+	SINE	Alu	AluSx1
CAediting_1323782	chr19_20117537_+	SINE	Alu	AluSg7
CAediting_1323783	chr19_20117538_+	SINE	Alu	AluSg7
CAediting_1323784	chr19_20119720_+	SINE	Alu	AluSq2
CAediting_1323785	chr19_20119724_+	SINE	Alu	AluSq2
CAediting_1323786	chr19_20119797_+	SINE	Alu	AluSq2
CAediting_1323787	chr19_20121258_+	SINE	Alu	AluSz
CAediting_1323788	chr19_20121264_+	SINE	Alu	AluSz
CAediting_1323789	chr19_20121283_+	SINE	Alu	AluSz
CAediting_1323790	chr19_20121297_+	SINE	Alu	AluSz
CAediting_1323791	chr19_20121298_+	SINE	Alu	AluSz
CAediting_1323792	chr19_20121303_+	SINE	Alu	AluSz
CAediting_1323793	chr19_20121304_+	SINE	Alu	AluSz
CAediting_1323794	chr19_20121308_+	SINE	Alu	AluSz
CAediting_1323795	chr19_20121345_+	SINE	Alu	AluSz
CAediting_1323796	chr19_20121386_+	SINE	Alu	AluSz
CAediting_1323797	chr19_20121395_+	SINE	Alu	AluSz
CAediting_1323798	chr19_20121416_+	SINE	Alu	AluSz
CAediting_1323799	chr19_20121974_+	SINE	Alu	AluSq
CAediting_1323800	chr19_20122020_+	SINE	Alu	AluSq
CAediting_1323801	chr19_20122021_+	SINE	Alu	AluSq
CAediting_1323802	chr19_20122028_+	SINE	Alu	AluSq
CAediting_1323803	chr19_20122034_+	SINE	Alu	AluSq
CAediting_1323804	chr19_20122043_+	SINE	Alu	AluSq
CAediting_1323805	chr19_20122046_+	SINE	Alu	AluSq
CAediting_1323806	chr19_20122080_+	SINE	Alu	AluSq
CAediting_1323807	chr19_20122084_+	SINE	Alu	AluSq
CAediting_1323808	chr19_20122090_+	SINE	Alu	AluSq
CAediting_1323809	chr19_20122113_+	SINE	Alu	AluSq
CAediting_1323810	chr19_20122124_+	SINE	Alu	AluSq
CAediting_1323811	chr19_20122130_+	SINE	Alu	AluSq
CAediting_1323812	chr19_20122131_+	SINE	Alu	AluSq
CAediting_1323813	chr19_20122149_+	SINE	Alu	AluSq
CAediting_1323814	chr19_20122167_+	SINE	Alu	AluSq
CAediting_1323815	chr19_20122170_+	SINE	Alu	AluSq

Top

RNA A-to-I editing events in the alternative splicing sites for ZNF90

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_1323795	chr19_20121345_+	20121344:20121352	5SS	2+0i	CAGGTGTGT	6.99	CGGGTGTGT	5.31
IR	CAediting_1323795	chr19_20121345_+	20121344:20121352	5SS	2+0i	CAGGTGTGT	6.99	CGGGTGTGT	5.31

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000213988.8.ZNF90.

Correlation between RNA A-to-I editing and PSI for ENSG00000213988.8.ZNF90.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF90

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for ZNF90

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for ZNF90

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000213988.8	ENST00000469078	hsa-miR-200b-3p	20126846	20126852	7mer-m8	20126828	20126853	146	-13.58
CAediting_393	chr1_1167164_+	ENSG00000213988.8	ENST00000473524	hsa-miR-200b-3p	20107071	20107077	7mer-m8	20107057	20107078	171	-19.63
CAediting_524911	chr7_5495852_-	ENSG00000213988.8	ENST00000473524	hsa-miR-589-3p	20106968	20106974	7mer-m8	20106952	20106975	156	-17.05
CAediting_1399425	chr20_1392958_-	ENSG00000213988.8	ENST00000473524	hsa-miR-6869-5p	20117969	20117975	7mer-m8	20117954	20117976	148	-21.83

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for ZNF90

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for ZNF90

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
THCA	CAediting_1323792	chr19_20121303_+	0.0280456565562019	0.239758876865898	.	.	.	.
TGCT	CAediting_1323792	chr19_20121303_+	0.0202033268911579	0.294386083592342	.	.	.	.
THCA	CAediting_1323793	chr19_20121304_+	4.6694971036937e-05	0.279042514955933	.	.	.	.
OV	CAediting_1323793	chr19_20121304_+	0.000857081633110231	0.31762097219333	.	.	.	.
TGCT	CAediting_1323793	chr19_20121304_+	0.0424902384961651	0.196511980185918	.	.	.	.
TGCT	CAediting_1323797	chr19_20121395_+	.	.	0.00769866490810479	0.305466478726494	.	.
TGCT	CAediting_1323807	chr19_20122084_+	0.0177869608209624	0.297750356031509	.	.	.	.
TGCT	CAediting_1323812	chr19_20122131_+	0.000960225243511355	0.429339324115987	.	.	.	.
TGCT	CAediting_1323814	chr19_20122167_+	0.0169398041668033	0.299905695416516	.	.	.	.

Top

Relation with cancer stages for ZNF90

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
TGCT	clinical_stage	CAediting_1323812	chr19_20122131_+	0.0452062688461864	-0.331254890943247
TGCT	pathologic_stage	CAediting_1323801	chr19_20122021_+	0.0300559809018589	0.383932452521646

Top

Relation with survival for ZNF90

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for ZNF90

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for ZNF90

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene