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Editing gene: ZNF84 (CAeditome ID:7637)

Gene summary for ZNF84

Gene summary

Gene information	Gene symbol	ZNF84
	Gene ID	7637
	Gene name	zinc finger protein 84
	Synonyms	HPF2
	Cytomap	12q24.33\|map from Rosati ref via FISH [AFS]
	Type of gene	protein-coding
	Description	zinc finger protein 84zinc finger protein HPF2
	Modification date	20210518
	UniProtAcc	P51523
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for ZNF84

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000198040.9

RNA A-to-I editing events in Cancer.

CAediting_950016(133038440, +), CAediting_950017(133039937, +), CAediting_950018(133039943, +), CAediting_950019(133039944, +), CAediting_950020(133039947, +), CAediting_950021(133039961, +), CAediting_950022(133039996, +), CAediting_950023(133040027, +), CAediting_950024(133040029, +), CAediting_950025(133040116, +), CAediting_950026(133040284, +), CAediting_950027(133040298, +), CAediting_950028(133040306, +), CAediting_950029(133040307, +), CAediting_950030(133040315, +), CAediting_950031(133040323, +), CAediting_950032(133040329, +), CAediting_950033(133040339, +), CAediting_950034(133040352, +), CAediting_950035(133040380, +), CAediting_950036(133040410, +), CAediting_950037(133040412, +), CAediting_950038(133040414, +), CAediting_950039(133040415, +), CAediting_950040(133040416, +), CAediting_950041(133040417, +), CAediting_950042(133040424, +), CAediting_950043(133040432, +), CAediting_950044(133040445, +), CAediting_950045(133040452, +), CAediting_950046(133040462, +), CAediting_950047(133040469, +), CAediting_950048(133040475, +), CAediting_950049(133040479, +), CAediting_950050(133044246, +), CAediting_950051(133044357, +), CAediting_950052(133044893, +), CAediting_950053(133044901, +), CAediting_950054(133046736, +), CAediting_950055(133049573, +), CAediting_950056(133049579, +), CAediting_950057(133049619, +), CAediting_950058(133050941, +), CAediting_950059(133050991, +), CAediting_950060(133051001, +), CAediting_950061(133051007, +), CAediting_950062(133052409, +), CAediting_950063(133052416, +), CAediting_950064(133052421, +), CAediting_950065(133052427, +), CAediting_950066(133052455, +), CAediting_950067(133052468, +), CAediting_950068(133052486, +), CAediting_950069(133052518, +), CAediting_950070(133052520, +), CAediting_950071(133052556, +), CAediting_950072(133052569, +), CAediting_950073(133052570, +), CAediting_950074(133052574, +), CAediting_950075(133053484, +), CAediting_950076(133053485, +), CAediting_950077(133053502, +), CAediting_950078(133053508, +), CAediting_950079(133053540, +), CAediting_950080(133053554, +), CAediting_950081(133053569, +), CAediting_950082(133053580, +), CAediting_950083(133053595, +), CAediting_950084(133053612, +), CAediting_950085(133053616, +), CAediting_950086(133053622, +), CAediting_950087(133053636, +), CAediting_950088(133053676, +), CAediting_950089(133053677, +), CAediting_950090(133053694, +), CAediting_950091(133053695, +), CAediting_950092(133053700, +), CAediting_950093(133054078, +), CAediting_950094(133054180, +), CAediting_950095(133054183, +), CAediting_950096(133054200, +), CAediting_950097(133054211, +), CAediting_950098(133054217, +), CAediting_950099(133054237, +), CAediting_950100(133054241, +), CAediting_950101(133054255, +), CAediting_950102(133054257, +), CAediting_950103(133054265, +), CAediting_950104(133054353, +), CAediting_950105(133055844, +), CAediting_950106(133055882, +), CAediting_950107(133055884, +), CAediting_950108(133055888, +), CAediting_950109(133055896, +), CAediting_950110(133055916, +), CAediting_950111(133055927, +), CAediting_950112(133055951, +), CAediting_950113(133055972, +), CAediting_950114(133055987, +), CAediting_950115(133056371, +), CAediting_950116(133056383, +), CAediting_950117(133056393, +), CAediting_950118(133056395, +), CAediting_950119(133056455, +), CAediting_950120(133056460, +), CAediting_950121(133056514, +), CAediting_950122(133056515, +), CAediting_950123(133056527, +), CAediting_950124(133056529, +), CAediting_950125(133058245, +), CAediting_950126(133058248, +), CAediting_950127(133058272, +), CAediting_950128(133058572, +), CAediting_950129(133058581, +), CAediting_950130(133058587, +), CAediting_950131(133058590, +), CAediting_950132(133058598, +), CAediting_950133(133058615, +), CAediting_950134(133058617, +), CAediting_950135(133061195, +), CAediting_950136(133061211, +), CAediting_950137(133061212, +), CAediting_950138(133061228, +), CAediting_950139(133061248, +), CAediting_950140(133061264, +), CAediting_950141(133061274, +), CAediting_950142(133061282, +), CAediting_950143(133061311, +), CAediting_950144(133061312, +), CAediting_950145(133061324, +), CAediting_950146(133061329, +), CAediting_950147(133061355, +), CAediting_950148(133061356, +), CAediting_950149(133061361, +), CAediting_950150(133061365, +), CAediting_950151(133061369, +), CAediting_950152(133061391, +), CAediting_950153(133061396, +), CAediting_950154(133061397, +), CAediting_950155(133061402, +), CAediting_950156(133061404, +), CAediting_950157(133061408, +), CAediting_950158(133061417, +), CAediting_950159(133061426, +), CAediting_950160(133061472, +),

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RNA editing positional annotations for ZNF84 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_950133	chr12_133058615_+	nonsynonymous SNV	ENST00000327668.10	c.A1900G	p.K634E	D	P	D
CAediting_950133	chr12_133058615_+	nonsynonymous SNV	ENST00000392319.5	c.A1900G	p.K634E	D	P	D
CAediting_950133	chr12_133058615_+	nonsynonymous SNV	ENST00000539354.4	c.A1900G	p.K634E	D	P	D
CAediting_950133	chr12_133058615_+	nonsynonymous SNV	ENST00000543758.4	c.A1897G	p.K633E	D	P	D

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_950016	chr12_133038440_+	ncRNA_intronic
CAediting_950017	chr12_133039937_+	ncRNA_intronic
CAediting_950018	chr12_133039943_+	ncRNA_intronic
CAediting_950019	chr12_133039944_+	ncRNA_intronic
CAediting_950020	chr12_133039947_+	ncRNA_intronic
CAediting_950021	chr12_133039961_+	ncRNA_intronic
CAediting_950022	chr12_133039996_+	ncRNA_intronic
CAediting_950023	chr12_133040027_+	ncRNA_intronic
CAediting_950024	chr12_133040029_+	ncRNA_intronic
CAediting_950025	chr12_133040116_+	ncRNA_intronic
CAediting_950026	chr12_133040284_+	ncRNA_intronic
CAediting_950027	chr12_133040298_+	ncRNA_intronic
CAediting_950028	chr12_133040306_+	ncRNA_intronic
CAediting_950029	chr12_133040307_+	ncRNA_intronic
CAediting_950030	chr12_133040315_+	ncRNA_intronic
CAediting_950031	chr12_133040323_+	ncRNA_intronic
CAediting_950032	chr12_133040329_+	ncRNA_intronic
CAediting_950033	chr12_133040339_+	ncRNA_intronic
CAediting_950034	chr12_133040352_+	ncRNA_intronic
CAediting_950035	chr12_133040380_+	ncRNA_intronic
CAediting_950036	chr12_133040410_+	ncRNA_intronic
CAediting_950037	chr12_133040412_+	ncRNA_intronic
CAediting_950038	chr12_133040414_+	ncRNA_intronic
CAediting_950039	chr12_133040415_+	ncRNA_intronic
CAediting_950040	chr12_133040416_+	ncRNA_intronic
CAediting_950041	chr12_133040417_+	ncRNA_intronic
CAediting_950042	chr12_133040424_+	ncRNA_intronic
CAediting_950043	chr12_133040432_+	ncRNA_intronic
CAediting_950044	chr12_133040445_+	ncRNA_exonic
CAediting_950045	chr12_133040452_+	ncRNA_exonic
CAediting_950046	chr12_133040462_+	ncRNA_exonic
CAediting_950047	chr12_133040469_+	ncRNA_exonic
CAediting_950048	chr12_133040475_+	ncRNA_exonic
CAediting_950049	chr12_133040479_+	ncRNA_exonic
CAediting_950050	chr12_133044246_+	ncRNA_intronic
CAediting_950051	chr12_133044357_+	ncRNA_intronic
CAediting_950052	chr12_133044893_+	ncRNA_intronic
CAediting_950053	chr12_133044901_+	ncRNA_intronic
CAediting_950054	chr12_133046736_+	ncRNA_intronic
CAediting_950055	chr12_133049573_+	ncRNA_intronic
CAediting_950056	chr12_133049579_+	ncRNA_intronic
CAediting_950057	chr12_133049619_+	ncRNA_intronic
CAediting_950058	chr12_133050941_+	ncRNA_intronic
CAediting_950059	chr12_133050991_+	ncRNA_intronic
CAediting_950060	chr12_133051001_+	ncRNA_intronic
CAediting_950061	chr12_133051007_+	ncRNA_intronic
CAediting_950062	chr12_133052409_+	ncRNA_intronic
CAediting_950063	chr12_133052416_+	ncRNA_intronic
CAediting_950064	chr12_133052421_+	ncRNA_intronic
CAediting_950065	chr12_133052427_+	ncRNA_intronic
CAediting_950066	chr12_133052455_+	ncRNA_intronic
CAediting_950067	chr12_133052468_+	ncRNA_intronic
CAediting_950068	chr12_133052486_+	ncRNA_intronic
CAediting_950069	chr12_133052518_+	ncRNA_intronic
CAediting_950070	chr12_133052520_+	ncRNA_intronic
CAediting_950071	chr12_133052556_+	ncRNA_intronic
CAediting_950072	chr12_133052569_+	ncRNA_intronic
CAediting_950073	chr12_133052570_+	ncRNA_intronic
CAediting_950074	chr12_133052574_+	ncRNA_intronic
CAediting_950075	chr12_133053484_+	ncRNA_intronic
CAediting_950076	chr12_133053485_+	ncRNA_intronic
CAediting_950077	chr12_133053502_+	ncRNA_intronic
CAediting_950078	chr12_133053508_+	ncRNA_intronic
CAediting_950079	chr12_133053540_+	ncRNA_intronic
CAediting_950080	chr12_133053554_+	ncRNA_intronic
CAediting_950081	chr12_133053569_+	ncRNA_intronic
CAediting_950082	chr12_133053580_+	ncRNA_intronic
CAediting_950083	chr12_133053595_+	ncRNA_intronic
CAediting_950084	chr12_133053612_+	ncRNA_intronic
CAediting_950085	chr12_133053616_+	ncRNA_intronic
CAediting_950086	chr12_133053622_+	ncRNA_intronic
CAediting_950087	chr12_133053636_+	ncRNA_intronic
CAediting_950088	chr12_133053676_+	ncRNA_intronic
CAediting_950089	chr12_133053677_+	ncRNA_intronic
CAediting_950090	chr12_133053694_+	ncRNA_intronic
CAediting_950091	chr12_133053695_+	ncRNA_intronic
CAediting_950092	chr12_133053700_+	ncRNA_intronic
CAediting_950093	chr12_133054078_+	ncRNA_intronic
CAediting_950094	chr12_133054180_+	ncRNA_intronic
CAediting_950095	chr12_133054183_+	ncRNA_intronic
CAediting_950096	chr12_133054200_+	ncRNA_intronic
CAediting_950097	chr12_133054211_+	ncRNA_intronic
CAediting_950098	chr12_133054217_+	ncRNA_intronic
CAediting_950099	chr12_133054237_+	ncRNA_intronic
CAediting_950100	chr12_133054241_+	ncRNA_intronic
CAediting_950101	chr12_133054255_+	ncRNA_intronic
CAediting_950102	chr12_133054257_+	ncRNA_intronic
CAediting_950103	chr12_133054265_+	ncRNA_intronic
CAediting_950104	chr12_133054353_+	ncRNA_intronic
CAediting_950105	chr12_133055844_+	ncRNA_intronic
CAediting_950106	chr12_133055882_+	ncRNA_intronic
CAediting_950107	chr12_133055884_+	ncRNA_intronic
CAediting_950108	chr12_133055888_+	ncRNA_intronic
CAediting_950109	chr12_133055896_+	ncRNA_intronic
CAediting_950110	chr12_133055916_+	ncRNA_intronic
CAediting_950111	chr12_133055927_+	ncRNA_intronic
CAediting_950112	chr12_133055951_+	ncRNA_intronic
CAediting_950113	chr12_133055972_+	ncRNA_intronic
CAediting_950114	chr12_133055987_+	ncRNA_intronic
CAediting_950115	chr12_133056371_+	ncRNA_intronic
CAediting_950116	chr12_133056383_+	ncRNA_intronic
CAediting_950117	chr12_133056393_+	ncRNA_intronic
CAediting_950118	chr12_133056395_+	ncRNA_intronic
CAediting_950119	chr12_133056455_+	ncRNA_intronic
CAediting_950120	chr12_133056460_+	ncRNA_intronic
CAediting_950121	chr12_133056514_+	ncRNA_intronic
CAediting_950122	chr12_133056515_+	ncRNA_intronic
CAediting_950123	chr12_133056527_+	ncRNA_intronic
CAediting_950124	chr12_133056529_+	ncRNA_intronic
CAediting_950125	chr12_133058245_+	exonic
CAediting_950126	chr12_133058248_+	exonic
CAediting_950127	chr12_133058272_+	exonic
CAediting_950128	chr12_133058572_+	exonic
CAediting_950129	chr12_133058581_+	exonic
CAediting_950130	chr12_133058587_+	exonic
CAediting_950131	chr12_133058590_+	exonic
CAediting_950132	chr12_133058598_+	exonic
CAediting_950133	chr12_133058615_+	exonic
CAediting_950134	chr12_133058617_+	exonic
CAediting_950135	chr12_133061195_+	UTR3
CAediting_950136	chr12_133061211_+	UTR3
CAediting_950137	chr12_133061212_+	UTR3
CAediting_950138	chr12_133061228_+	UTR3
CAediting_950139	chr12_133061248_+	UTR3
CAediting_950140	chr12_133061264_+	UTR3
CAediting_950141	chr12_133061274_+	UTR3
CAediting_950142	chr12_133061282_+	UTR3
CAediting_950143	chr12_133061311_+	UTR3
CAediting_950144	chr12_133061312_+	UTR3
CAediting_950145	chr12_133061324_+	UTR3
CAediting_950146	chr12_133061329_+	UTR3
CAediting_950147	chr12_133061355_+	UTR3
CAediting_950148	chr12_133061356_+	UTR3
CAediting_950149	chr12_133061361_+	UTR3
CAediting_950150	chr12_133061365_+	UTR3
CAediting_950151	chr12_133061369_+	UTR3
CAediting_950152	chr12_133061391_+	UTR3
CAediting_950153	chr12_133061396_+	UTR3
CAediting_950154	chr12_133061397_+	UTR3
CAediting_950155	chr12_133061402_+	UTR3
CAediting_950156	chr12_133061404_+	UTR3
CAediting_950157	chr12_133061408_+	UTR3
CAediting_950158	chr12_133061417_+	UTR3
CAediting_950159	chr12_133061426_+	UTR3
CAediting_950160	chr12_133061472_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_950016	chr12_133038440_+	SINE	Alu	AluJo
CAediting_950017	chr12_133039937_+	SINE	Alu	AluSq2
CAediting_950018	chr12_133039943_+	SINE	Alu	AluSq2
CAediting_950019	chr12_133039944_+	SINE	Alu	AluSq2
CAediting_950020	chr12_133039947_+	SINE	Alu	AluSq2
CAediting_950021	chr12_133039961_+	SINE	Alu	AluSq2
CAediting_950022	chr12_133039996_+	SINE	Alu	AluSq2
CAediting_950023	chr12_133040027_+	SINE	Alu	AluSq2
CAediting_950024	chr12_133040029_+	SINE	Alu	AluSq2
CAediting_950025	chr12_133040116_+	SINE	Alu	AluSq2
CAediting_950026	chr12_133040284_+	SINE	Alu	AluJo
CAediting_950027	chr12_133040298_+	SINE	Alu	AluJo
CAediting_950028	chr12_133040306_+	SINE	Alu	AluJo
CAediting_950029	chr12_133040307_+	SINE	Alu	AluJo
CAediting_950030	chr12_133040315_+	SINE	Alu	AluJo
CAediting_950031	chr12_133040323_+	SINE	Alu	AluJo
CAediting_950032	chr12_133040329_+	SINE	Alu	AluJo
CAediting_950033	chr12_133040339_+	SINE	Alu	AluJo
CAediting_950034	chr12_133040352_+	SINE	Alu	AluJo
CAediting_950035	chr12_133040380_+	SINE	Alu	AluJo
CAediting_950036	chr12_133040410_+	SINE	Alu	AluJo
CAediting_950037	chr12_133040412_+	SINE	Alu	AluJo
CAediting_950038	chr12_133040414_+	SINE	Alu	AluJo
CAediting_950039	chr12_133040415_+	SINE	Alu	AluJo
CAediting_950040	chr12_133040416_+	SINE	Alu	AluJo
CAediting_950041	chr12_133040417_+	SINE	Alu	AluJo
CAediting_950042	chr12_133040424_+	SINE	Alu	AluJo
CAediting_950043	chr12_133040432_+	SINE	Alu	AluJo
CAediting_950044	chr12_133040445_+	SINE	Alu	AluJo
CAediting_950045	chr12_133040452_+	SINE	Alu	AluJo
CAediting_950046	chr12_133040462_+	SINE	Alu	AluJo
CAediting_950047	chr12_133040469_+	SINE	Alu	AluJo
CAediting_950048	chr12_133040475_+	SINE	Alu	AluJo
CAediting_950049	chr12_133040479_+	SINE	Alu	AluJo
CAediting_950050	chr12_133044246_+	SINE	Alu	AluJr
CAediting_950051	chr12_133044357_+	SINE	Alu	AluJr
CAediting_950052	chr12_133044893_+	SINE	Alu	AluSc8
CAediting_950053	chr12_133044901_+	SINE	Alu	AluSc8
CAediting_950054	chr12_133046736_+	SINE	Alu	AluJb
CAediting_950055	chr12_133049573_+	SINE	Alu	AluSx3
CAediting_950056	chr12_133049579_+	SINE	Alu	AluSx3
CAediting_950057	chr12_133049619_+	SINE	Alu	AluSx3
CAediting_950058	chr12_133050941_+	SINE	Alu	AluJo
CAediting_950059	chr12_133050991_+	SINE	Alu	AluJo
CAediting_950060	chr12_133051001_+	SINE	Alu	AluJo
CAediting_950061	chr12_133051007_+	SINE	Alu	AluJo
CAediting_950062	chr12_133052409_+	SINE	Alu	AluJb
CAediting_950063	chr12_133052416_+	SINE	Alu	AluJb
CAediting_950064	chr12_133052421_+	SINE	Alu	AluJb
CAediting_950065	chr12_133052427_+	SINE	Alu	AluJb
CAediting_950066	chr12_133052455_+	SINE	Alu	AluJb
CAediting_950067	chr12_133052468_+	SINE	Alu	AluJb
CAediting_950068	chr12_133052486_+	SINE	Alu	AluJb
CAediting_950069	chr12_133052518_+	SINE	Alu	AluJb
CAediting_950070	chr12_133052520_+	SINE	Alu	AluJb
CAediting_950071	chr12_133052556_+	SINE	Alu	AluJb
CAediting_950072	chr12_133052569_+	SINE	Alu	AluJb
CAediting_950073	chr12_133052570_+	SINE	Alu	AluJb
CAediting_950074	chr12_133052574_+	SINE	Alu	AluJb
CAediting_950075	chr12_133053484_+	SINE	Alu	AluJo
CAediting_950076	chr12_133053485_+	SINE	Alu	AluJo
CAediting_950077	chr12_133053502_+	SINE	Alu	AluJo
CAediting_950078	chr12_133053508_+	SINE	Alu	AluJo
CAediting_950079	chr12_133053540_+	SINE	Alu	AluJo
CAediting_950080	chr12_133053554_+	SINE	Alu	AluJo
CAediting_950081	chr12_133053569_+	SINE	Alu	AluJo
CAediting_950082	chr12_133053580_+	SINE	Alu	AluJo
CAediting_950083	chr12_133053595_+	SINE	Alu	AluJo
CAediting_950084	chr12_133053612_+	SINE	Alu	AluJo
CAediting_950085	chr12_133053616_+	SINE	Alu	AluJo
CAediting_950086	chr12_133053622_+	SINE	Alu	AluJo
CAediting_950087	chr12_133053636_+	SINE	Alu	AluJo
CAediting_950088	chr12_133053676_+	SINE	Alu	AluJo
CAediting_950089	chr12_133053677_+	SINE	Alu	AluJo
CAediting_950090	chr12_133053694_+	SINE	Alu	AluJo
CAediting_950091	chr12_133053695_+	SINE	Alu	AluJo
CAediting_950092	chr12_133053700_+	SINE	Alu	AluJo
CAediting_950093	chr12_133054078_+	SINE	Alu	AluJo
CAediting_950094	chr12_133054180_+	SINE	Alu	AluJo
CAediting_950095	chr12_133054183_+	SINE	Alu	AluJo
CAediting_950096	chr12_133054200_+	SINE	Alu	AluJo
CAediting_950097	chr12_133054211_+	SINE	Alu	AluJo
CAediting_950098	chr12_133054217_+	SINE	Alu	AluJo
CAediting_950099	chr12_133054237_+	SINE	Alu	AluJo
CAediting_950100	chr12_133054241_+	SINE	Alu	AluJo
CAediting_950101	chr12_133054255_+	SINE	Alu	AluJo
CAediting_950102	chr12_133054257_+	SINE	Alu	AluJo
CAediting_950103	chr12_133054265_+	SINE	Alu	AluJo
CAediting_950104	chr12_133054353_+	SINE	Alu	AluJo
CAediting_950105	chr12_133055844_+	SINE	Alu	AluJr
CAediting_950106	chr12_133055882_+	SINE	Alu	AluJr
CAediting_950107	chr12_133055884_+	SINE	Alu	AluJr
CAediting_950108	chr12_133055888_+	SINE	Alu	AluJr
CAediting_950109	chr12_133055896_+	SINE	Alu	AluJr
CAediting_950110	chr12_133055916_+	SINE	Alu	AluJr
CAediting_950111	chr12_133055927_+	SINE	Alu	AluJr
CAediting_950112	chr12_133055951_+	SINE	Alu	AluJr
CAediting_950113	chr12_133055972_+	SINE	Alu	AluJr
CAediting_950114	chr12_133055987_+	SINE	Alu	AluJr
CAediting_950115	chr12_133056371_+	SINE	Alu	AluY
CAediting_950116	chr12_133056383_+	SINE	Alu	AluY
CAediting_950117	chr12_133056393_+	SINE	Alu	AluY
CAediting_950118	chr12_133056395_+	SINE	Alu	AluY
CAediting_950119	chr12_133056455_+	SINE	Alu	AluY
CAediting_950120	chr12_133056460_+	SINE	Alu	AluY
CAediting_950121	chr12_133056514_+	SINE	Alu	AluY
CAediting_950122	chr12_133056515_+	SINE	Alu	AluY
CAediting_950123	chr12_133056527_+	SINE	Alu	AluY
CAediting_950124	chr12_133056529_+	SINE	Alu	AluY
CAediting_950135	chr12_133061195_+	SINE	Alu	AluSz6
CAediting_950136	chr12_133061211_+	SINE	Alu	AluSz6
CAediting_950137	chr12_133061212_+	SINE	Alu	AluSz6
CAediting_950138	chr12_133061228_+	SINE	Alu	AluSz6
CAediting_950139	chr12_133061248_+	SINE	Alu	AluSz6
CAediting_950140	chr12_133061264_+	SINE	Alu	AluSz6
CAediting_950141	chr12_133061274_+	SINE	Alu	AluSz6
CAediting_950142	chr12_133061282_+	SINE	Alu	AluSz6
CAediting_950143	chr12_133061311_+	SINE	Alu	AluSz6
CAediting_950144	chr12_133061312_+	SINE	Alu	AluSz6
CAediting_950145	chr12_133061324_+	SINE	Alu	AluSz6
CAediting_950146	chr12_133061329_+	SINE	Alu	AluSz6
CAediting_950147	chr12_133061355_+	SINE	Alu	AluSz6
CAediting_950148	chr12_133061356_+	SINE	Alu	AluSz6
CAediting_950149	chr12_133061361_+	SINE	Alu	AluSz6
CAediting_950150	chr12_133061365_+	SINE	Alu	AluSz6
CAediting_950151	chr12_133061369_+	SINE	Alu	AluSz6
CAediting_950152	chr12_133061391_+	SINE	Alu	AluSz6
CAediting_950153	chr12_133061396_+	SINE	Alu	AluSz6
CAediting_950154	chr12_133061397_+	SINE	Alu	AluSz6
CAediting_950155	chr12_133061402_+	SINE	Alu	AluSz6
CAediting_950156	chr12_133061404_+	SINE	Alu	AluSz6
CAediting_950157	chr12_133061408_+	SINE	Alu	AluSz6
CAediting_950158	chr12_133061417_+	SINE	Alu	AluSz6
CAediting_950159	chr12_133061426_+	SINE	Alu	AluSz6
CAediting_950160	chr12_133061472_+	SINE	Alu	AluSz6

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RNA A-to-I editing events in the alternative splicing sites for ZNF84

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198040.9.ZNF84.

Correlation between RNA A-to-I editing and PSI for ENSG00000198040.9.ZNF84.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for ZNF84

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for ZNF84

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for ZNF84

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000392319	hsa-miR-513a-5p	133061349	133061355	7mer-m8	133061339	133061356	147.00	-13.85
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000392319	hsa-miR-513a-5p	133061349	133061355	7mer-m8	133061339	133061356	147.00	-13.85
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000392319	hsa-miR-638	133061354	133061360	7mer-1a	133061337	133061360	153.00	-33.98
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000327668	hsa-miR-513a-5p	133061349	133061355	7mer-m8	133061339	133061356	147.00	-13.85
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000327668	hsa-miR-513a-5p	133061349	133061355	7mer-m8	133061339	133061356	147.00	-13.85
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000327668	hsa-miR-638	133061354	133061360	7mer-1a	133061337	133061360	153.00	-33.98
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000392319	hsa-miR-8052	133061354	133061360	7mer-1a	133061338	133061360	143.00	-23.67
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000327668	hsa-miR-8052	133061354	133061360	7mer-1a	133061338	133061360	143.00	-23.67
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511b-3p	133061416	133061421	6mer	133061400	133061422	148.00	-26.65
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6511b-3p	133061416	133061421	6mer	133061400	133061422	148.00	-26.65
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6784-3p	133061416	133061421	6mer	133061400	133061422	151.00	-27.41
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6862-3p	133061416	133061421	6mer	133061399	133061422	140.00	-31.52
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6862-3p	133061416	133061421	6mer	133061399	133061422	140.00	-31.52
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511a-3p	133061416	133061421	6mer	133061401	133061422	144.00	-25.72
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511b-3p	133061416	133061421	6mer	133061400	133061422	148.00	-26.65
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6511b-3p	133061416	133061421	6mer	133061400	133061422	148.00	-26.65
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6784-3p	133061416	133061421	6mer	133061400	133061422	151.00	-27.41
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6862-3p	133061416	133061421	6mer	133061399	133061422	140.00	-31.52
CAediting_950158	chr12_133061417_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6862-3p	133061416	133061421	6mer	133061399	133061422	140.00	-31.52
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000392319	hsa-miR-513a-5p	133061205	133061211	7mer-m8	133061195	133061212	152.00	-17.32
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000392319	hsa-miR-513a-5p	133061205	133061211	7mer-m8	133061195	133061212	152.00	-17.32
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000392319	hsa-miR-638	133061210	133061216	7mer-1a	133061192	133061216	153.00	-31.53
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000327668	hsa-miR-513a-5p	133061205	133061211	7mer-m8	133061195	133061212	152.00	-17.32
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000327668	hsa-miR-513a-5p	133061205	133061211	7mer-m8	133061195	133061212	152.00	-17.32
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000327668	hsa-miR-638	133061210	133061216	7mer-1a	133061192	133061216	153.00	-31.53
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000392319	hsa-miR-8052	133061210	133061216	7mer-1a	133061198	133061216	148.00	-29.06
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000327668	hsa-miR-8052	133061210	133061216	7mer-1a	133061198	133061216	148.00	-29.06
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000392319	hsa-miR-3943	133061225	133061231	7mer-m8	133061211	133061232	143.00	-22.28
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000327668	hsa-miR-3943	133061225	133061231	7mer-m8	133061211	133061232	143.00	-22.28
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000392319	hsa-miR-515-5p	133061278	133061284	7mer-m8	133061262	133061285	140.00	-15.66
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000392319	hsa-miR-515-5p	133061278	133061284	7mer-m8	133061262	133061285	140.00	-15.66
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000392319	hsa-miR-519e-5p	133061278	133061284	7mer-m8	133061264	133061285	140.00	-11.91
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000327668	hsa-miR-515-5p	133061278	133061284	7mer-m8	133061262	133061285	140.00	-15.66
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000327668	hsa-miR-515-5p	133061278	133061284	7mer-m8	133061262	133061285	140.00	-15.66
CAediting_950142	chr12_133061282_+	ENSG00000198040.9	ENST00000327668	hsa-miR-519e-5p	133061278	133061284	7mer-m8	133061264	133061285	140.00	-11.91
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-152-5p	133061309	133061315	7mer-m8	133061294	133061316	148.00	-16.80
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4727-5p	133061306	133061313	8mer-1a	133061291	133061313	146.00	-13.94
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4769-3p	133061305	133061312	8mer-1a	133061291	133061312	140.00	-13.31
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6738-3p	133061307	133061313	7mer-m8	133061290	133061314	141.00	-11.83
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6817-5p	133061305	133061312	8mer-1a	133061289	133061312	145.00	-19.86
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-152-5p	133061309	133061315	7mer-m8	133061294	133061316	148.00	-16.80
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4727-5p	133061306	133061313	8mer-1a	133061291	133061313	146.00	-13.94
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4769-3p	133061305	133061312	8mer-1a	133061291	133061312	140.00	-13.31
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6738-3p	133061307	133061313	7mer-m8	133061290	133061314	141.00	-11.83
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6817-5p	133061305	133061312	8mer-1a	133061289	133061312	145.00	-19.86
CAediting_950153	chr12_133061396_+	ENSG00000198040.9	ENST00000392319	hsa-miR-9900	133061394	133061401	8mer-1a	133061382	133061401	155.00	-17.19
CAediting_950153	chr12_133061396_+	ENSG00000198040.9	ENST00000327668	hsa-miR-9900	133061394	133061401	8mer-1a	133061382	133061401	155.00	-17.19
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4726-3p	133061396	133061403	8mer-1a	133061382	133061403	150.00	-18.84
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6778-3p	133061400	133061407	8mer-1a	133061389	133061407	143.00	-17.84
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6791-3p	133061401	133061407	7mer-1a	133061388	133061407	140.00	-22.09
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4726-3p	133061396	133061403	8mer-1a	133061382	133061403	150.00	-18.84
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6778-3p	133061400	133061407	8mer-1a	133061389	133061407	143.00	-17.84
CAediting_950155	chr12_133061402_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6791-3p	133061401	133061407	7mer-1a	133061388	133061407	140.00	-22.09
CAediting_950156	chr12_133061404_+	ENSG00000198040.9	ENST00000392319	hsa-miR-1913	133061402	133061409	8mer-1a	133061389	133061409	147.00	-17.62
CAediting_950156	chr12_133061404_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4749-3p	133061400	133061407	8mer-1a	133061388	133061407	140.00	-16.35
CAediting_950156	chr12_133061404_+	ENSG00000198040.9	ENST00000327668	hsa-miR-1913	133061402	133061409	8mer-1a	133061389	133061409	147.00	-17.62
CAediting_950156	chr12_133061404_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4749-3p	133061400	133061407	8mer-1a	133061388	133061407	140.00	-16.35
CAediting_950159	chr12_133061426_+	ENSG00000198040.9	ENST00000392319	hsa-miR-149-5p	133061419	133061425	7mer-m8	133061404	133061426	152.00	-22.11
CAediting_950159	chr12_133061426_+	ENSG00000198040.9	ENST00000327668	hsa-miR-149-5p	133061419	133061425	7mer-m8	133061404	133061426	152.00	-22.11
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-130a-5p	133061465	133061472	8mer-1a	133061451	133061472	140.00	-12.14
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4659a-3p	133061470	133061477	8mer-1a	133061455	133061477	142.00	-12.94
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4659b-3p	133061470	133061477	8mer-1a	133061455	133061477	147.00	-17.31
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4753-3p	133061466	133061473	8mer-1a	133061452	133061473	155.00	-9.56
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6809-3p	133061467	133061473	7mer-m8	133061454	133061474	144.00	-12.02
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-942-5p	133061468	133061475	8mer-1a	133061454	133061475	166.00	-18.12
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-130a-5p	133061465	133061472	8mer-1a	133061451	133061472	140.00	-12.14
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4659a-3p	133061470	133061477	8mer-1a	133061455	133061477	142.00	-12.94
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4659b-3p	133061470	133061477	8mer-1a	133061455	133061477	147.00	-17.31
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4753-3p	133061466	133061473	8mer-1a	133061452	133061473	155.00	-9.56
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6809-3p	133061467	133061473	7mer-m8	133061454	133061474	144.00	-12.02
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-942-5p	133061468	133061475	8mer-1a	133061454	133061475	166.00	-18.12
CAediting_950139	chr12_133061248_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4286	133061242	133061249	8mer-1a	133061233	133061249	146.00	-20.75
CAediting_950139	chr12_133061248_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4286	133061242	133061249	8mer-1a	133061233	133061249	146.00	-20.75
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000392319	hsa-miR-3155a	133061394	133061401	8mer-1a	133061383	133061401	145.00	-19.66
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000392319	hsa-miR-3155b	133061394	133061401	8mer-1a	133061386	133061401	145.00	-18.76
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000392319	hsa-miR-484	133061394	133061401	8mer-1a	133061375	133061401	150.00	-24.97
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000327668	hsa-miR-3155a	133061394	133061401	8mer-1a	133061383	133061401	145.00	-19.66
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000327668	hsa-miR-3155b	133061394	133061401	8mer-1a	133061386	133061401	145.00	-18.76
CAediting_950154	chr12_133061397_+	ENSG00000198040.9	ENST00000327668	hsa-miR-484	133061394	133061401	8mer-1a	133061375	133061401	150.00	-24.97

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000392319	hsa-miR-10399-5p	133061206	133061212	7mer-m8	133061192	133061213	144	-10.53
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000392319	hsa-miR-10399-5p	133061206	133061212	7mer-m8	133061192	133061213	144	-10.53
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000392319	hsa-miR-10399-5p	133061350	133061356	7mer-m8	133061337	133061357	142	-9.96
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000392319	hsa-miR-10399-5p	133061350	133061356	7mer-m8	133061337	133061357	142	-9.96
CAediting_950151	chr12_133061369_+	ENSG00000198040.9	ENST00000392319	hsa-miR-1200	133061365	133061371	7mer-m8	133061351	133061372	149	-18.57
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000392319	hsa-miR-1245a	133061259	133061265	7mer-m8	133061243	133061266	150	-19.72
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000392319	hsa-miR-150-5p	133061222	133061228	7mer-m8	133061208	133061229	140	-15.8
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000392319	hsa-miR-19a-5p	133061308	133061314	7mer-m8	133061294	133061315	152	-12.79
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000392319	hsa-miR-19a-5p	133061308	133061314	7mer-m8	133061294	133061315	152	-12.79
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4252	133061193	133061199	7mer-m8	133061181	133061200	154	-21.53
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4659a-5p	133061304	133061311	8mer-1a	133061287	133061311	153	-13.84
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4659b-5p	133061304	133061311	8mer-1a	133061290	133061311	151	-15.95
CAediting_950146	chr12_133061329_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4735-5p	133061323	133061329	7mer-m8	133061308	133061330	152	-9.49
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-5008-3p	133061190	133061195	6mer	133061174	133061196	142	-23.93
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000392319	hsa-miR-5089-5p	133061210	133061216	7mer-m8	133061198	133061217	146	-13.24
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000392319	hsa-miR-5089-5p	133061354	133061360	7mer-m8	133061341	133061361	152	-16.44
CAediting_950149	chr12_133061361_+	ENSG00000198040.9	ENST00000392319	hsa-miR-5089-5p	133061354	133061360	7mer-m8	133061341	133061361	152	-16.44
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-550b-2-5p	133061189	133061194	6mer	133061175	133061195	141	-19.84
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-550b-2-5p	133061189	133061194	6mer	133061175	133061195	141	-19.84
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000392319	hsa-miR-627-3p	133061468	133061475	8mer-1a	133061456	133061475	150	-13.13
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000392319	hsa-miR-640	133061257	133061263	7mer-m8	133061244	133061264	140	-11.7
CAediting_950149	chr12_133061361_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6506-5p	133061355	133061361	7mer-m8	133061340	133061362	144	-17.52
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6529-3p	133061189	133061195	7mer-m8	133061175	133061196	141	-12.43
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6778-3p	133061224	133061230	7mer-m8	133061211	133061231	143	-14.47
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000392319	hsa-miR-6889-3p	133061189	133061195	7mer-m8	133061177	133061196	145	-20.09
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000392319	hsa-miR-7151-3p	133061204	133061211	8mer-1a	133061195	133061211	146	-17.62
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000392319	hsa-miR-7151-3p	133061348	133061355	8mer-1a	133061335	133061355	146	-12.82
CAediting_950152	chr12_133061391_+	ENSG00000198040.9	ENST00000392319	hsa-miR-8062	133061386	133061392	7mer-m8	133061373	133061393	141	-10.43
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000392319	hsa-miR-8079	133061259	133061265	7mer-m8	133061248	133061266	145	-13.09
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000327668	hsa-miR-10399-5p	133061206	133061212	7mer-m8	133061192	133061213	144	-10.53
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000327668	hsa-miR-10399-5p	133061206	133061212	7mer-m8	133061192	133061213	144	-10.53
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000327668	hsa-miR-10399-5p	133061350	133061356	7mer-m8	133061337	133061357	142	-9.96
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000327668	hsa-miR-10399-5p	133061350	133061356	7mer-m8	133061337	133061357	142	-9.96
CAediting_950151	chr12_133061369_+	ENSG00000198040.9	ENST00000327668	hsa-miR-1200	133061365	133061371	7mer-m8	133061351	133061372	149	-18.57
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000327668	hsa-miR-1245a	133061259	133061265	7mer-m8	133061243	133061266	150	-19.72
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000327668	hsa-miR-150-5p	133061222	133061228	7mer-m8	133061208	133061229	140	-15.8
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000327668	hsa-miR-19a-5p	133061308	133061314	7mer-m8	133061294	133061315	152	-12.79
CAediting_950144	chr12_133061312_+	ENSG00000198040.9	ENST00000327668	hsa-miR-19a-5p	133061308	133061314	7mer-m8	133061294	133061315	152	-12.79
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4252	133061193	133061199	7mer-m8	133061181	133061200	154	-21.53
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4659a-5p	133061304	133061311	8mer-1a	133061287	133061311	153	-13.84
CAediting_950143	chr12_133061311_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4659b-5p	133061304	133061311	8mer-1a	133061290	133061311	151	-15.95
CAediting_950146	chr12_133061329_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4735-5p	133061323	133061329	7mer-m8	133061308	133061330	152	-9.49
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-5008-3p	133061190	133061195	6mer	133061174	133061196	142	-23.93
CAediting_950137	chr12_133061212_+	ENSG00000198040.9	ENST00000327668	hsa-miR-5089-5p	133061210	133061216	7mer-m8	133061198	133061217	146	-13.24
CAediting_950148	chr12_133061356_+	ENSG00000198040.9	ENST00000327668	hsa-miR-5089-5p	133061354	133061360	7mer-m8	133061341	133061361	152	-16.44
CAediting_950149	chr12_133061361_+	ENSG00000198040.9	ENST00000327668	hsa-miR-5089-5p	133061354	133061360	7mer-m8	133061341	133061361	152	-16.44
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-550b-2-5p	133061189	133061194	6mer	133061175	133061195	141	-19.84
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-550b-2-5p	133061189	133061194	6mer	133061175	133061195	141	-19.84
CAediting_950160	chr12_133061472_+	ENSG00000198040.9	ENST00000327668	hsa-miR-627-3p	133061468	133061475	8mer-1a	133061456	133061475	150	-13.13
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000327668	hsa-miR-640	133061257	133061263	7mer-m8	133061244	133061264	140	-11.7
CAediting_950149	chr12_133061361_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6506-5p	133061355	133061361	7mer-m8	133061340	133061362	144	-17.52
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6529-3p	133061189	133061195	7mer-m8	133061175	133061196	141	-12.43
CAediting_950138	chr12_133061228_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6778-3p	133061224	133061230	7mer-m8	133061211	133061231	143	-14.47
CAediting_950135	chr12_133061195_+	ENSG00000198040.9	ENST00000327668	hsa-miR-6889-3p	133061189	133061195	7mer-m8	133061177	133061196	145	-20.09
CAediting_950136	chr12_133061211_+	ENSG00000198040.9	ENST00000327668	hsa-miR-7151-3p	133061204	133061211	8mer-1a	133061195	133061211	146	-17.62
CAediting_950147	chr12_133061355_+	ENSG00000198040.9	ENST00000327668	hsa-miR-7151-3p	133061348	133061355	8mer-1a	133061335	133061355	146	-12.82
CAediting_950152	chr12_133061391_+	ENSG00000198040.9	ENST00000327668	hsa-miR-8062	133061386	133061392	7mer-m8	133061373	133061393	141	-10.43
CAediting_950140	chr12_133061264_+	ENSG00000198040.9	ENST00000327668	hsa-miR-8079	133061259	133061265	7mer-m8	133061248	133061266	145	-13.09

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000198040.9	ENST00000392319	hsa-miR-624-3p	133061313	133061319	7mer-m8	133061300	133061320	160	-16.55
CAediting_980496	chr14_31014685_-	ENSG00000198040.9	ENST00000327668	hsa-miR-624-3p	133061313	133061319	7mer-m8	133061300	133061320	160	-16.55
CAediting_1229413	chr17_67471544_+	ENSG00000198040.9	ENST00000392319	hsa-miR-548aa	133062319	133062325	7mer-m8	133062300	133062326	150	-10.51
CAediting_1229414	chr17_67471546_+	ENSG00000198040.9	ENST00000392319	hsa-miR-548aa	133063196	133063202	7mer-m8	133063179	133063203	152	-12.57
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000392319	hsa-miR-195-3p	133060444	133060450	7mer-m8	133060430	133060451	140	-8.76
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000392319	hsa-miR-195-3p	133062176	133062181	6mer	133062161	133062182	145	-13.5
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000392319	hsa-miR-195-3p	133059907	133059913	7mer-m8	133059892	133059914	167	-23.18
CAediting_1351755	chr19_40282625_-	ENSG00000198040.9	ENST00000392319	hsa-miR-641	133061951	133061956	6mer	133061934	133061957	141	-18.9
CAediting_117844	chr1_162342605_+	ENSG00000198040.9	ENST00000392319	hsa-miR-556-3p	133059282	133059288	7mer-m8	133059265	133059289	148	-13.61
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000392319	hsa-miR-4635	133061237	133061243	7mer-m8	133061224	133061244	155	-20.53
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000392319	hsa-miR-4635	133061237	133061243	7mer-m8	133061237	133061257	151	-20.78
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000392319	hsa-miR-4635	133061250	133061256	7mer-m8	133061237	133061257	151	-20.78
CAediting_117844	chr1_162342605_+	ENSG00000198040.9	ENST00000543758	hsa-miR-556-3p	133059282	133059288	7mer-m8	133059265	133059289	148	-13.61
CAediting_1229413	chr17_67471544_+	ENSG00000198040.9	ENST00000327668	hsa-miR-548aa	133062319	133062325	7mer-m8	133062300	133062326	150	-10.51
CAediting_1229414	chr17_67471546_+	ENSG00000198040.9	ENST00000327668	hsa-miR-548aa	133063196	133063202	7mer-m8	133063179	133063203	152	-12.57
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000327668	hsa-miR-195-3p	133060444	133060450	7mer-m8	133060430	133060451	140	-8.76
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000327668	hsa-miR-195-3p	133062176	133062181	6mer	133062161	133062182	145	-13.5
CAediting_1160181	chr17_7017644_-	ENSG00000198040.9	ENST00000327668	hsa-miR-195-3p	133059907	133059913	7mer-m8	133059892	133059914	167	-23.18
CAediting_1351755	chr19_40282625_-	ENSG00000198040.9	ENST00000327668	hsa-miR-641	133061951	133061956	6mer	133061934	133061957	141	-18.9
CAediting_117844	chr1_162342605_+	ENSG00000198040.9	ENST00000327668	hsa-miR-556-3p	133059282	133059288	7mer-m8	133059265	133059289	148	-13.61
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000327668	hsa-miR-4635	133061237	133061243	7mer-m8	133061224	133061244	155	-20.53
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000327668	hsa-miR-4635	133061237	133061243	7mer-m8	133061237	133061257	151	-20.78
CAediting_396018	chr5_1062918_-	ENSG00000198040.9	ENST00000327668	hsa-miR-4635	133061250	133061256	7mer-m8	133061237	133061257	151	-20.78

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000198040.9	ENST00000392319	hsa-miR-1285-5p	133063255	133063262	8mer-1a	133063242	133063262	140	-10.73
CAediting_573000	chr7_92204081_-	ENSG00000198040.9	ENST00000392319	hsa-miR-1285-5p	133063255	133063262	8mer-1a	133063242	133063262	140	-10.73
CAediting_846604	chr11_93733708_-	ENSG00000198040.9	ENST00000392319	hsa-miR-1304-3p	133063117	133063124	8mer-1a	133063103	133063124	154	-22.24
CAediting_688080	chr9_63819626_+	ENSG00000198040.9	ENST00000392319	hsa-miR-4477b	133062208	133062214	7mer-m8	133062193	133062215	146	-7.3
CAediting_1229413	chr17_67471544_+	ENSG00000198040.9	ENST00000392319	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_1229414	chr17_67471546_+	ENSG00000198040.9	ENST00000392319	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_1229415	chr17_67471547_+	ENSG00000198040.9	ENST00000392319	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_228905	chr2_188297554_+	ENSG00000198040.9	ENST00000392319	hsa-miR-561-3p	133062796	133062802	7mer-m8	133062779	133062803	145	-8.23
CAediting_980496	chr14_31014685_-	ENSG00000198040.9	ENST00000392319	hsa-miR-624-3p	133061930	133061937	8mer-1a	133061917	133061937	147	-10.21
CAediting_1351755	chr19_40282625_-	ENSG00000198040.9	ENST00000392319	hsa-miR-641	133063231	133063237	7mer-m8	133063211	133063238	152	-18.58
CAediting_573001	chr7_92204086_-	ENSG00000198040.9	ENST00000327668	hsa-miR-1285-5p	133063255	133063262	8mer-1a	133063242	133063262	140	-10.73
CAediting_573000	chr7_92204081_-	ENSG00000198040.9	ENST00000327668	hsa-miR-1285-5p	133063255	133063262	8mer-1a	133063242	133063262	140	-10.73
CAediting_846604	chr11_93733708_-	ENSG00000198040.9	ENST00000327668	hsa-miR-1304-3p	133063117	133063124	8mer-1a	133063103	133063124	154	-22.24
CAediting_688080	chr9_63819626_+	ENSG00000198040.9	ENST00000327668	hsa-miR-4477b	133062208	133062214	7mer-m8	133062193	133062215	146	-7.3
CAediting_1229413	chr17_67471544_+	ENSG00000198040.9	ENST00000327668	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_1229414	chr17_67471546_+	ENSG00000198040.9	ENST00000327668	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_1229415	chr17_67471547_+	ENSG00000198040.9	ENST00000327668	hsa-miR-548aa	133059751	133059757	7mer-m8	133059734	133059758	140	-6.76
CAediting_228905	chr2_188297554_+	ENSG00000198040.9	ENST00000327668	hsa-miR-561-3p	133062796	133062802	7mer-m8	133062779	133062803	145	-8.23
CAediting_980496	chr14_31014685_-	ENSG00000198040.9	ENST00000327668	hsa-miR-624-3p	133061930	133061937	8mer-1a	133061917	133061937	147	-10.21
CAediting_1351755	chr19_40282625_-	ENSG00000198040.9	ENST00000327668	hsa-miR-641	133063231	133063237	7mer-m8	133063211	133063238	152	-18.58

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for ZNF84

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for ZNF84

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_950045	chr12_133040452_+	0.000288001194706596	0.360371304945328	.	.	.	.

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Relation with cancer stages for ZNF84

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for ZNF84

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for ZNF84

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for ZNF84

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene