|
Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples | |
The effects of the RNA editing to the stability of the RNA structures | |
Editing gene: YWHAZ (CAeditome ID:7534) |
Gene summary for YWHAZ |
Gene summary |
Gene information | Gene symbol | YWHAZ | Gene ID | 7534 |
Gene name | tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein zeta | |
Synonyms | 14-3-3-zeta|HEL-S-3|HEL-S-93|HEL4|KCIP-1|POPCHAS|YWHAD | |
Cytomap | 8q22.3 | |
Type of gene | protein-coding | |
Description | 14-3-3 protein zeta/delta14-3-3 delta14-3-3 protein/cytosolic phospholipase A214-3-3 zetaepididymis luminal protein 4epididymis secretory protein Li 3epididymis secretory protein Li 93phospholipase A2protein kinase C inhibitor protein-1tyrosine 3 | |
Modification date | 20210531 | |
UniProtAcc | P63104 | |
Context |
Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez |
Gene | GO ID | GO term | PubMed ID |
YWHAZ | GO:0070372 | 14-3-3 protein zeta/delta | 31024343 |
YWHAZ | GO:0090128 | 14-3-3 protein zeta/delta | 16959763 |
YWHAZ | GO:0098978 | 14-3-3 protein zeta/delta | 16959763 |
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RNA A-to-I events for YWHAZ |
RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure. |
RNA editing frequencies across 33 cancers of gene: ENSG00000164924.16 |
RNA A-to-I editing events in Cancer. |
CAediting_653940(100917461, -), CAediting_653941(100917466, -), CAediting_653942(100917475, -), CAediting_653943(100917476, -), CAediting_653944(100917552, -), CAediting_653945(100917555, -), CAediting_653946(100917561, -), CAediting_653947(100917567, -), CAediting_653948(100917570, -), CAediting_653949(100917607, -), CAediting_653950(100917610, -), CAediting_653951(100917611, -), CAediting_653952(100917619, -), CAediting_653953(100917632, -), CAediting_653954(100917637, -), CAediting_653955(100917643, -), CAediting_653956(100917656, -), CAediting_653957(100917693, -), CAediting_653958(100917717, -), CAediting_653959(100918078, -), CAediting_653960(100918080, -), CAediting_653961(100918086, -), CAediting_653962(100918098, -), CAediting_653963(100918107, -), CAediting_653964(100918108, -), CAediting_653965(100918121, -), CAediting_653966(100918171, -), CAediting_653967(100918177, -), CAediting_653968(100918180, -), CAediting_653969(100918260, -), CAediting_653970(100918261, -), CAediting_653971(100918280, -), CAediting_653972(100918296, -), CAediting_653973(100918317, -), CAediting_653974(100918321, -), CAediting_653975(100921091, -), CAediting_653976(100921102, -), CAediting_653977(100921123, -), CAediting_653978(100921145, -), CAediting_653979(100921158, -), CAediting_653980(100921166, -), CAediting_653981(100921198, -), CAediting_653982(100921201, -), CAediting_653983(100921227, -), CAediting_653984(100921233, -), CAediting_653985(100921252, -), CAediting_653986(100921253, -), CAediting_653987(100921258, -), CAediting_653988(100921302, -), CAediting_653989(100921308, -), CAediting_653990(100921687, -), CAediting_653991(100922385, -), CAediting_653992(100922424, -), CAediting_653993(100922449, -), CAediting_653994(100922463, -), CAediting_653995(100922472, -), CAediting_653996(100922507, -), CAediting_653997(100922523, -), CAediting_653998(100922605, -), CAediting_653999(100922613, -), CAediting_654000(100922640, -), CAediting_654001(100922656, -), CAediting_654002(100924582, -), CAediting_654003(100926427, -), CAediting_654004(100926509, -), CAediting_654005(100927266, -), CAediting_654006(100927279, -), CAediting_654007(100927288, -), CAediting_654008(100927293, -), CAediting_654009(100927321, -), CAediting_654010(100927323, -), CAediting_654011(100927357, -), CAediting_654012(100927368, -), CAediting_654013(100927369, -), CAediting_654014(100927375, -), CAediting_654015(100927376, -), CAediting_654016(100927402, -), CAediting_654017(100927412, -), CAediting_654018(100927416, -), CAediting_654019(100927424, -), CAediting_654020(100927442, -), CAediting_654021(100927456, -), CAediting_654022(100927472, -), CAediting_654023(100927474, -), CAediting_654024(100927485, -), CAediting_654025(100927493, -), CAediting_654026(100927498, -), CAediting_654027(100927508, -), CAediting_654028(100927514, -), CAediting_654029(100928023, -), CAediting_654030(100928035, -), CAediting_654031(100928036, -), CAediting_654032(100928045, -), CAediting_654033(100928086, -), CAediting_654034(100928090, -), CAediting_654035(100928098, -), CAediting_654036(100928113, -), CAediting_654037(100928158, -), CAediting_654038(100928168, -), CAediting_654039(100928180, -), CAediting_654040(100928217, -), CAediting_654041(100928228, -), CAediting_654042(100928233, -), CAediting_654043(100928278, -), CAediting_654044(100928459, -), CAediting_654045(100928469, -), CAediting_654046(100928487, -), CAediting_654047(100928515, -), CAediting_654048(100928559, -), CAediting_654049(100928575, -), CAediting_654050(100928585, -), CAediting_654051(100928598, -), CAediting_654052(100928633, -), CAediting_654053(100928681, -), CAediting_654054(100928686, -), CAediting_654055(100928733, -), CAediting_654056(100929230, -), CAediting_654057(100929265, -), CAediting_654058(100929276, -), CAediting_654059(100929289, -), CAediting_654060(100929292, -), CAediting_654061(100929296, -), CAediting_654062(100929297, -), CAediting_654063(100929304, -), CAediting_654064(100929305, -), CAediting_654065(100929311, -), CAediting_654066(100929315, -), CAediting_654067(100929321, -), CAediting_654068(100929324, -), CAediting_654069(100929328, -), CAediting_654070(100929332, -), CAediting_654071(100929337, -), CAediting_654072(100929338, -), CAediting_654073(100929348, -), CAediting_654074(100929356, -), CAediting_654075(100929364, -), CAediting_654076(100929368, -), CAediting_654077(100929369, -), CAediting_654078(100929373, -), CAediting_654079(100929377, -), CAediting_654080(100929378, -), CAediting_654081(100929379, -), CAediting_654082(100929393, -), CAediting_654083(100929404, -), CAediting_654084(100929413, -), CAediting_654085(100929416, -), CAediting_654086(100929418, -), CAediting_654087(100929419, -), CAediting_654088(100929424, -), CAediting_654089(100929425, -), CAediting_654090(100929427, -), CAediting_654091(100929431, -), CAediting_654092(100929432, -), CAediting_654093(100929446, -), CAediting_654094(100929450, -), CAediting_654095(100929456, -), CAediting_654096(100929464, -), CAediting_654097(100929467, -), CAediting_654098(100929473, -), CAediting_654099(100929490, -), CAediting_654100(100930151, -), CAediting_654101(100930161, -), CAediting_654102(100930167, -), CAediting_654103(100930195, -), CAediting_654104(100930196, -), CAediting_654105(100930201, -), CAediting_654106(100930207, -), CAediting_654107(100930208, -), CAediting_654108(100930210, -), CAediting_654109(100930218, -), CAediting_654110(100930237, -), CAediting_654111(100930247, -), CAediting_654112(100930252, -), CAediting_654113(100930263, -), CAediting_654114(100930266, -), CAediting_654115(100930268, -), CAediting_654116(100930269, -), CAediting_654117(100930272, -), CAediting_654118(100930274, -), CAediting_654119(100930275, -), CAediting_654120(100930276, -), CAediting_654121(100930277, -), CAediting_654122(100930278, -), CAediting_654123(100930281, -), CAediting_654124(100930298, -), CAediting_654125(100930302, -), CAediting_654126(100930318, -), CAediting_654127(100930331, -), CAediting_654128(100930334, -), CAediting_654129(100930364, -), CAediting_654130(100930369, -), CAediting_654131(100930370, -), CAediting_654132(100933116, -), CAediting_654133(100933179, -), CAediting_654134(100933211, -), CAediting_654135(100933276, -), CAediting_654136(100933744, -), CAediting_654137(100933778, -), CAediting_654138(100933787, -), CAediting_654139(100933927, -), CAediting_654140(100933964, -), CAediting_654141(100934046, -), CAediting_654142(100934250, -), CAediting_654143(100934471, -), CAediting_654144(100934475, -), CAediting_654145(100934513, -), CAediting_654146(100934518, -), CAediting_654147(100934553, -), CAediting_654148(100934577, -), CAediting_654149(100934579, -), CAediting_654150(100934589, -), CAediting_654151(100934618, -), CAediting_654152(100935029, -), CAediting_654153(100935031, -), CAediting_654154(100935041, -), CAediting_654155(100935067, -), CAediting_654156(100935070, -), CAediting_654157(100935100, -), CAediting_654158(100935111, -), CAediting_654159(100935113, -), CAediting_654160(100936679, -), CAediting_654161(100936791, -), CAediting_654162(100939537, -), CAediting_654163(100939770, -), CAediting_654164(100941540, -), CAediting_654165(100943797, -), CAediting_654166(100943865, -), CAediting_654167(100946282, -), CAediting_654168(100946370, -), CAediting_654169(100946382, -), CAediting_654170(100946383, -), CAediting_654171(100946387, -), CAediting_654172(100946450, -), CAediting_654173(100946465, -), CAediting_654174(100946488, -), CAediting_654175(100946499, -), CAediting_654176(100946507, -), |
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RNA editing positional annotations for YWHAZ using Annovar |
Protein coding RNA editing(s). |
CAeditome ID | Position | Variant type | ENST | NTchange | AAchange | SIFT_score | Polyphen2_HVAR_score | PROVEAN_pred |
Gene structure information of RNA editing(s). |
CAeditome ID | Position | Variant type |
CAediting_653940 | chr8_100917461_- | UTR3 |
CAediting_653941 | chr8_100917466_- | UTR3 |
CAediting_653942 | chr8_100917475_- | UTR3 |
CAediting_653943 | chr8_100917476_- | UTR3 |
CAediting_653944 | chr8_100917552_- | UTR3 |
CAediting_653945 | chr8_100917555_- | UTR3 |
CAediting_653946 | chr8_100917561_- | UTR3 |
CAediting_653947 | chr8_100917567_- | UTR3 |
CAediting_653948 | chr8_100917570_- | UTR3 |
CAediting_653949 | chr8_100917607_- | UTR3 |
CAediting_653950 | chr8_100917610_- | UTR3 |
CAediting_653951 | chr8_100917611_- | UTR3 |
CAediting_653952 | chr8_100917619_- | UTR3 |
CAediting_653953 | chr8_100917632_- | UTR3 |
CAediting_653954 | chr8_100917637_- | UTR3 |
CAediting_653955 | chr8_100917643_- | UTR3 |
CAediting_653956 | chr8_100917656_- | UTR3 |
CAediting_653957 | chr8_100917693_- | UTR3 |
CAediting_653958 | chr8_100917717_- | UTR3 |
CAediting_653959 | chr8_100918078_- | UTR3 |
CAediting_653960 | chr8_100918080_- | UTR3 |
CAediting_653961 | chr8_100918086_- | UTR3 |
CAediting_653962 | chr8_100918098_- | UTR3 |
CAediting_653963 | chr8_100918107_- | UTR3 |
CAediting_653964 | chr8_100918108_- | UTR3 |
CAediting_653965 | chr8_100918121_- | UTR3 |
CAediting_653966 | chr8_100918171_- | UTR3 |
CAediting_653967 | chr8_100918177_- | UTR3 |
CAediting_653968 | chr8_100918180_- | UTR3 |
CAediting_653969 | chr8_100918260_- | UTR3 |
CAediting_653970 | chr8_100918261_- | UTR3 |
CAediting_653971 | chr8_100918280_- | UTR3 |
CAediting_653972 | chr8_100918296_- | UTR3 |
CAediting_653973 | chr8_100918317_- | UTR3 |
CAediting_653974 | chr8_100918321_- | UTR3 |
CAediting_653975 | chr8_100921091_- | intronic |
CAediting_653976 | chr8_100921102_- | intronic |
CAediting_653977 | chr8_100921123_- | intronic |
CAediting_653978 | chr8_100921145_- | intronic |
CAediting_653979 | chr8_100921158_- | intronic |
CAediting_653980 | chr8_100921166_- | intronic |
CAediting_653981 | chr8_100921198_- | intronic |
CAediting_653982 | chr8_100921201_- | intronic |
CAediting_653983 | chr8_100921227_- | intronic |
CAediting_653984 | chr8_100921233_- | intronic |
CAediting_653985 | chr8_100921252_- | intronic |
CAediting_653986 | chr8_100921253_- | intronic |
CAediting_653987 | chr8_100921258_- | intronic |
CAediting_653988 | chr8_100921302_- | intronic |
CAediting_653989 | chr8_100921308_- | intronic |
CAediting_653990 | chr8_100921687_- | intronic |
CAediting_653991 | chr8_100922385_- | intronic |
CAediting_653992 | chr8_100922424_- | intronic |
CAediting_653993 | chr8_100922449_- | ncRNA_exonic |
CAediting_653994 | chr8_100922463_- | ncRNA_exonic |
CAediting_653995 | chr8_100922472_- | ncRNA_exonic |
CAediting_653996 | chr8_100922507_- | ncRNA_exonic |
CAediting_653997 | chr8_100922523_- | ncRNA_exonic |
CAediting_653998 | chr8_100922605_- | ncRNA_exonic |
CAediting_653999 | chr8_100922613_- | ncRNA_exonic |
CAediting_654000 | chr8_100922640_- | ncRNA_exonic |
CAediting_654001 | chr8_100922656_- | ncRNA_exonic |
CAediting_654002 | chr8_100924582_- | ncRNA_intronic |
CAediting_654003 | chr8_100926427_- | ncRNA_intronic |
CAediting_654004 | chr8_100926509_- | ncRNA_intronic |
CAediting_654005 | chr8_100927266_- | ncRNA_intronic |
CAediting_654006 | chr8_100927279_- | ncRNA_intronic |
CAediting_654007 | chr8_100927288_- | ncRNA_intronic |
CAediting_654008 | chr8_100927293_- | ncRNA_intronic |
CAediting_654009 | chr8_100927321_- | ncRNA_intronic |
CAediting_654010 | chr8_100927323_- | ncRNA_intronic |
CAediting_654011 | chr8_100927357_- | ncRNA_intronic |
CAediting_654012 | chr8_100927368_- | ncRNA_intronic |
CAediting_654013 | chr8_100927369_- | ncRNA_intronic |
CAediting_654014 | chr8_100927375_- | ncRNA_intronic |
CAediting_654015 | chr8_100927376_- | ncRNA_intronic |
CAediting_654016 | chr8_100927402_- | ncRNA_intronic |
CAediting_654017 | chr8_100927412_- | ncRNA_intronic |
CAediting_654018 | chr8_100927416_- | ncRNA_intronic |
CAediting_654019 | chr8_100927424_- | ncRNA_intronic |
CAediting_654020 | chr8_100927442_- | ncRNA_intronic |
CAediting_654021 | chr8_100927456_- | ncRNA_intronic |
CAediting_654022 | chr8_100927472_- | ncRNA_intronic |
CAediting_654023 | chr8_100927474_- | ncRNA_intronic |
CAediting_654024 | chr8_100927485_- | ncRNA_intronic |
CAediting_654025 | chr8_100927493_- | ncRNA_intronic |
CAediting_654026 | chr8_100927498_- | ncRNA_intronic |
CAediting_654027 | chr8_100927508_- | ncRNA_intronic |
CAediting_654028 | chr8_100927514_- | ncRNA_intronic |
CAediting_654029 | chr8_100928023_- | ncRNA_intronic |
CAediting_654030 | chr8_100928035_- | ncRNA_intronic |
CAediting_654031 | chr8_100928036_- | ncRNA_intronic |
CAediting_654032 | chr8_100928045_- | ncRNA_intronic |
CAediting_654033 | chr8_100928086_- | ncRNA_intronic |
CAediting_654034 | chr8_100928090_- | ncRNA_intronic |
CAediting_654035 | chr8_100928098_- | ncRNA_intronic |
CAediting_654036 | chr8_100928113_- | ncRNA_intronic |
CAediting_654037 | chr8_100928158_- | ncRNA_intronic |
CAediting_654038 | chr8_100928168_- | ncRNA_intronic |
CAediting_654039 | chr8_100928180_- | ncRNA_intronic |
CAediting_654040 | chr8_100928217_- | ncRNA_intronic |
CAediting_654041 | chr8_100928228_- | ncRNA_intronic |
CAediting_654042 | chr8_100928233_- | ncRNA_intronic |
CAediting_654043 | chr8_100928278_- | ncRNA_intronic |
CAediting_654044 | chr8_100928459_- | ncRNA_intronic |
CAediting_654045 | chr8_100928469_- | ncRNA_intronic |
CAediting_654046 | chr8_100928487_- | ncRNA_intronic |
CAediting_654047 | chr8_100928515_- | ncRNA_intronic |
CAediting_654048 | chr8_100928559_- | ncRNA_intronic |
CAediting_654049 | chr8_100928575_- | ncRNA_intronic |
CAediting_654050 | chr8_100928585_- | ncRNA_intronic |
CAediting_654051 | chr8_100928598_- | ncRNA_intronic |
CAediting_654052 | chr8_100928633_- | ncRNA_intronic |
CAediting_654053 | chr8_100928681_- | ncRNA_intronic |
CAediting_654054 | chr8_100928686_- | ncRNA_intronic |
CAediting_654055 | chr8_100928733_- | ncRNA_intronic |
CAediting_654056 | chr8_100929230_- | ncRNA_intronic |
CAediting_654057 | chr8_100929265_- | ncRNA_intronic |
CAediting_654058 | chr8_100929276_- | ncRNA_intronic |
CAediting_654059 | chr8_100929289_- | ncRNA_intronic |
CAediting_654060 | chr8_100929292_- | ncRNA_intronic |
CAediting_654061 | chr8_100929296_- | ncRNA_intronic |
CAediting_654062 | chr8_100929297_- | ncRNA_intronic |
CAediting_654063 | chr8_100929304_- | ncRNA_intronic |
CAediting_654064 | chr8_100929305_- | ncRNA_intronic |
CAediting_654065 | chr8_100929311_- | ncRNA_intronic |
CAediting_654066 | chr8_100929315_- | ncRNA_intronic |
CAediting_654067 | chr8_100929321_- | ncRNA_intronic |
CAediting_654068 | chr8_100929324_- | ncRNA_intronic |
CAediting_654069 | chr8_100929328_- | ncRNA_intronic |
CAediting_654070 | chr8_100929332_- | ncRNA_intronic |
CAediting_654071 | chr8_100929337_- | ncRNA_intronic |
CAediting_654072 | chr8_100929338_- | ncRNA_intronic |
CAediting_654073 | chr8_100929348_- | ncRNA_intronic |
CAediting_654074 | chr8_100929356_- | ncRNA_intronic |
CAediting_654075 | chr8_100929364_- | ncRNA_intronic |
CAediting_654076 | chr8_100929368_- | ncRNA_intronic |
CAediting_654077 | chr8_100929369_- | ncRNA_intronic |
CAediting_654078 | chr8_100929373_- | ncRNA_intronic |
CAediting_654079 | chr8_100929377_- | ncRNA_intronic |
CAediting_654080 | chr8_100929378_- | ncRNA_intronic |
CAediting_654081 | chr8_100929379_- | ncRNA_intronic |
CAediting_654082 | chr8_100929393_- | ncRNA_intronic |
CAediting_654083 | chr8_100929404_- | ncRNA_intronic |
CAediting_654084 | chr8_100929413_- | ncRNA_intronic |
CAediting_654085 | chr8_100929416_- | ncRNA_intronic |
CAediting_654086 | chr8_100929418_- | ncRNA_intronic |
CAediting_654087 | chr8_100929419_- | ncRNA_intronic |
CAediting_654088 | chr8_100929424_- | ncRNA_intronic |
CAediting_654089 | chr8_100929425_- | ncRNA_intronic |
CAediting_654090 | chr8_100929427_- | ncRNA_intronic |
CAediting_654091 | chr8_100929431_- | ncRNA_intronic |
CAediting_654092 | chr8_100929432_- | ncRNA_intronic |
CAediting_654093 | chr8_100929446_- | ncRNA_intronic |
CAediting_654094 | chr8_100929450_- | ncRNA_intronic |
CAediting_654095 | chr8_100929456_- | ncRNA_intronic |
CAediting_654096 | chr8_100929464_- | ncRNA_intronic |
CAediting_654097 | chr8_100929467_- | ncRNA_intronic |
CAediting_654098 | chr8_100929473_- | ncRNA_intronic |
CAediting_654099 | chr8_100929490_- | ncRNA_intronic |
CAediting_654100 | chr8_100930151_- | ncRNA_intronic |
CAediting_654101 | chr8_100930161_- | ncRNA_intronic |
CAediting_654102 | chr8_100930167_- | ncRNA_intronic |
CAediting_654103 | chr8_100930195_- | ncRNA_intronic |
CAediting_654104 | chr8_100930196_- | ncRNA_intronic |
CAediting_654105 | chr8_100930201_- | ncRNA_intronic |
CAediting_654106 | chr8_100930207_- | ncRNA_intronic |
CAediting_654107 | chr8_100930208_- | ncRNA_intronic |
CAediting_654108 | chr8_100930210_- | ncRNA_intronic |
CAediting_654109 | chr8_100930218_- | ncRNA_intronic |
CAediting_654110 | chr8_100930237_- | ncRNA_intronic |
CAediting_654111 | chr8_100930247_- | ncRNA_intronic |
CAediting_654112 | chr8_100930252_- | ncRNA_intronic |
CAediting_654113 | chr8_100930263_- | ncRNA_intronic |
CAediting_654114 | chr8_100930266_- | ncRNA_intronic |
CAediting_654115 | chr8_100930268_- | ncRNA_intronic |
CAediting_654116 | chr8_100930269_- | ncRNA_intronic |
CAediting_654117 | chr8_100930272_- | ncRNA_intronic |
CAediting_654118 | chr8_100930274_- | ncRNA_intronic |
CAediting_654119 | chr8_100930275_- | ncRNA_intronic |
CAediting_654120 | chr8_100930276_- | ncRNA_intronic |
CAediting_654121 | chr8_100930277_- | ncRNA_intronic |
CAediting_654122 | chr8_100930278_- | ncRNA_intronic |
CAediting_654123 | chr8_100930281_- | ncRNA_intronic |
CAediting_654124 | chr8_100930298_- | ncRNA_intronic |
CAediting_654125 | chr8_100930302_- | ncRNA_intronic |
CAediting_654126 | chr8_100930318_- | ncRNA_intronic |
CAediting_654127 | chr8_100930331_- | ncRNA_intronic |
CAediting_654128 | chr8_100930334_- | ncRNA_intronic |
CAediting_654129 | chr8_100930364_- | ncRNA_intronic |
CAediting_654130 | chr8_100930369_- | ncRNA_intronic |
CAediting_654131 | chr8_100930370_- | ncRNA_intronic |
CAediting_654132 | chr8_100933116_- | ncRNA_intronic |
CAediting_654133 | chr8_100933179_- | ncRNA_intronic |
CAediting_654134 | chr8_100933211_- | ncRNA_intronic |
CAediting_654135 | chr8_100933276_- | ncRNA_intronic |
CAediting_654136 | chr8_100933744_- | ncRNA_intronic |
CAediting_654137 | chr8_100933778_- | ncRNA_intronic |
CAediting_654138 | chr8_100933787_- | ncRNA_intronic |
CAediting_654139 | chr8_100933927_- | ncRNA_intronic |
CAediting_654140 | chr8_100933964_- | ncRNA_intronic |
CAediting_654141 | chr8_100934046_- | ncRNA_intronic |
CAediting_654142 | chr8_100934250_- | ncRNA_intronic |
CAediting_654143 | chr8_100934471_- | ncRNA_intronic |
CAediting_654144 | chr8_100934475_- | ncRNA_intronic |
CAediting_654145 | chr8_100934513_- | ncRNA_intronic |
CAediting_654146 | chr8_100934518_- | ncRNA_intronic |
CAediting_654147 | chr8_100934553_- | ncRNA_intronic |
CAediting_654148 | chr8_100934577_- | ncRNA_intronic |
CAediting_654149 | chr8_100934579_- | ncRNA_intronic |
CAediting_654150 | chr8_100934589_- | ncRNA_intronic |
CAediting_654151 | chr8_100934618_- | ncRNA_intronic |
CAediting_654152 | chr8_100935029_- | ncRNA_intronic |
CAediting_654153 | chr8_100935031_- | ncRNA_intronic |
CAediting_654154 | chr8_100935041_- | ncRNA_intronic |
CAediting_654155 | chr8_100935067_- | ncRNA_intronic |
CAediting_654156 | chr8_100935070_- | ncRNA_intronic |
CAediting_654157 | chr8_100935100_- | ncRNA_intronic |
CAediting_654158 | chr8_100935111_- | ncRNA_intronic |
CAediting_654159 | chr8_100935113_- | ncRNA_intronic |
CAediting_654160 | chr8_100936679_- | ncRNA_intronic |
CAediting_654161 | chr8_100936791_- | ncRNA_intronic |
CAediting_654162 | chr8_100939537_- | ncRNA_intronic |
CAediting_654163 | chr8_100939770_- | ncRNA_intronic |
CAediting_654164 | chr8_100941540_- | ncRNA_intronic |
CAediting_654165 | chr8_100943797_- | ncRNA_intronic |
CAediting_654166 | chr8_100943865_- | ncRNA_intronic |
CAediting_654167 | chr8_100946282_- | ncRNA_intronic |
CAediting_654168 | chr8_100946370_- | ncRNA_intronic |
CAediting_654169 | chr8_100946382_- | ncRNA_intronic |
CAediting_654170 | chr8_100946383_- | ncRNA_intronic |
CAediting_654171 | chr8_100946387_- | ncRNA_intronic |
CAediting_654172 | chr8_100946450_- | ncRNA_intronic |
CAediting_654173 | chr8_100946465_- | ncRNA_intronic |
CAediting_654174 | chr8_100946488_- | ncRNA_intronic |
CAediting_654175 | chr8_100946499_- | ncRNA_intronic |
CAediting_654176 | chr8_100946507_- | ncRNA_intronic |
Repat-regional RNA editing(s). |
CAeditome ID | Position | Repeat family | Repeat sub family | Repeat name |
CAediting_653940 | chr8_100917461_- | SINE | Alu | AluSc8 |
CAediting_653941 | chr8_100917466_- | SINE | Alu | AluSc8 |
CAediting_653942 | chr8_100917475_- | SINE | Alu | AluSc8 |
CAediting_653943 | chr8_100917476_- | SINE | Alu | AluSc8 |
CAediting_653944 | chr8_100917552_- | SINE | Alu | AluSc8 |
CAediting_653945 | chr8_100917555_- | SINE | Alu | AluSc8 |
CAediting_653946 | chr8_100917561_- | SINE | Alu | AluSc8 |
CAediting_653947 | chr8_100917567_- | SINE | Alu | AluSc8 |
CAediting_653948 | chr8_100917570_- | SINE | Alu | AluSc8 |
CAediting_653949 | chr8_100917607_- | SINE | Alu | AluSc8 |
CAediting_653950 | chr8_100917610_- | SINE | Alu | AluSc8 |
CAediting_653951 | chr8_100917611_- | SINE | Alu | AluSc8 |
CAediting_653952 | chr8_100917619_- | SINE | Alu | AluSc8 |
CAediting_653953 | chr8_100917632_- | SINE | Alu | AluSc8 |
CAediting_653954 | chr8_100917637_- | SINE | Alu | AluSc8 |
CAediting_653955 | chr8_100917643_- | SINE | Alu | AluSc8 |
CAediting_653956 | chr8_100917656_- | SINE | Alu | AluSc8 |
CAediting_653957 | chr8_100917693_- | SINE | Alu | AluSc8 |
CAediting_653958 | chr8_100917717_- | SINE | Alu | AluSc8 |
CAediting_653959 | chr8_100918078_- | SINE | Alu | AluSx1 |
CAediting_653960 | chr8_100918080_- | SINE | Alu | AluSx1 |
CAediting_653961 | chr8_100918086_- | SINE | Alu | AluSx1 |
CAediting_653962 | chr8_100918098_- | SINE | Alu | AluSx1 |
CAediting_653963 | chr8_100918107_- | SINE | Alu | AluSx1 |
CAediting_653964 | chr8_100918108_- | SINE | Alu | AluSx1 |
CAediting_653965 | chr8_100918121_- | SINE | Alu | AluSx1 |
CAediting_653966 | chr8_100918171_- | SINE | Alu | AluSx1 |
CAediting_653967 | chr8_100918177_- | SINE | Alu | AluSx1 |
CAediting_653968 | chr8_100918180_- | SINE | Alu | AluSx1 |
CAediting_653969 | chr8_100918260_- | SINE | Alu | AluSx1 |
CAediting_653970 | chr8_100918261_- | SINE | Alu | AluSx1 |
CAediting_653971 | chr8_100918280_- | SINE | Alu | AluSx1 |
CAediting_653972 | chr8_100918296_- | SINE | Alu | AluSx1 |
CAediting_653973 | chr8_100918317_- | SINE | Alu | AluSx1 |
CAediting_653974 | chr8_100918321_- | SINE | Alu | AluSx1 |
CAediting_653975 | chr8_100921091_- | SINE | Alu | AluSc |
CAediting_653976 | chr8_100921102_- | SINE | Alu | AluSc |
CAediting_653977 | chr8_100921123_- | SINE | Alu | AluSc |
CAediting_653978 | chr8_100921145_- | SINE | Alu | AluSc |
CAediting_653979 | chr8_100921158_- | SINE | Alu | AluSc |
CAediting_653980 | chr8_100921166_- | SINE | Alu | AluSc |
CAediting_653981 | chr8_100921198_- | SINE | Alu | AluSc |
CAediting_653982 | chr8_100921201_- | SINE | Alu | AluSc |
CAediting_653983 | chr8_100921227_- | SINE | Alu | AluSc |
CAediting_653984 | chr8_100921233_- | SINE | Alu | AluSc |
CAediting_653985 | chr8_100921252_- | SINE | Alu | AluSc |
CAediting_653986 | chr8_100921253_- | SINE | Alu | AluSc |
CAediting_653987 | chr8_100921258_- | SINE | Alu | AluSc |
CAediting_653988 | chr8_100921302_- | SINE | Alu | AluSc |
CAediting_653989 | chr8_100921308_- | SINE | Alu | AluSc |
CAediting_653990 | chr8_100921687_- | DNA | TcMar-Mariner | MADE1 |
CAediting_653991 | chr8_100922385_- | SINE | Alu | AluSg7 |
CAediting_653992 | chr8_100922424_- | SINE | Alu | AluSg7 |
CAediting_653993 | chr8_100922449_- | SINE | Alu | AluSg7 |
CAediting_653994 | chr8_100922463_- | SINE | Alu | AluSg7 |
CAediting_653995 | chr8_100922472_- | SINE | Alu | AluSg7 |
CAediting_653996 | chr8_100922507_- | SINE | Alu | AluSg7 |
CAediting_653997 | chr8_100922523_- | SINE | Alu | AluSg7 |
CAediting_653998 | chr8_100922605_- | SINE | Alu | AluSg7 |
CAediting_653999 | chr8_100922613_- | SINE | Alu | AluSg7 |
CAediting_654000 | chr8_100922640_- | SINE | Alu | AluSg7 |
CAediting_654001 | chr8_100922656_- | SINE | Alu | AluSg7 |
CAediting_654002 | chr8_100924582_- | SINE | Alu | AluJb |
CAediting_654003 | chr8_100926427_- | SINE | Alu | AluSx1 |
CAediting_654004 | chr8_100926509_- | SINE | Alu | AluSx1 |
CAediting_654005 | chr8_100927266_- | SINE | Alu | AluJo |
CAediting_654006 | chr8_100927279_- | SINE | Alu | AluJo |
CAediting_654007 | chr8_100927288_- | SINE | Alu | AluJo |
CAediting_654008 | chr8_100927293_- | SINE | Alu | AluJo |
CAediting_654009 | chr8_100927321_- | SINE | Alu | AluJo |
CAediting_654010 | chr8_100927323_- | SINE | Alu | AluJo |
CAediting_654011 | chr8_100927357_- | SINE | Alu | AluJo |
CAediting_654012 | chr8_100927368_- | SINE | Alu | AluJo |
CAediting_654013 | chr8_100927369_- | SINE | Alu | AluJo |
CAediting_654014 | chr8_100927375_- | SINE | Alu | AluJo |
CAediting_654015 | chr8_100927376_- | SINE | Alu | AluJo |
CAediting_654016 | chr8_100927402_- | SINE | Alu | AluJo |
CAediting_654017 | chr8_100927412_- | SINE | Alu | AluJo |
CAediting_654018 | chr8_100927416_- | SINE | Alu | AluJo |
CAediting_654019 | chr8_100927424_- | SINE | Alu | AluJo |
CAediting_654020 | chr8_100927442_- | SINE | Alu | AluJo |
CAediting_654021 | chr8_100927456_- | SINE | Alu | AluJo |
CAediting_654022 | chr8_100927472_- | SINE | Alu | AluJo |
CAediting_654023 | chr8_100927474_- | SINE | Alu | AluJo |
CAediting_654024 | chr8_100927485_- | SINE | Alu | AluJo |
CAediting_654025 | chr8_100927493_- | SINE | Alu | AluJo |
CAediting_654026 | chr8_100927498_- | SINE | Alu | AluJo |
CAediting_654027 | chr8_100927508_- | SINE | Alu | AluJo |
CAediting_654028 | chr8_100927514_- | SINE | Alu | AluJo |
CAediting_654029 | chr8_100928023_- | SINE | Alu | AluY |
CAediting_654030 | chr8_100928035_- | SINE | Alu | AluY |
CAediting_654031 | chr8_100928036_- | SINE | Alu | AluY |
CAediting_654032 | chr8_100928045_- | SINE | Alu | AluY |
CAediting_654033 | chr8_100928086_- | SINE | Alu | AluY |
CAediting_654034 | chr8_100928090_- | SINE | Alu | AluY |
CAediting_654035 | chr8_100928098_- | SINE | Alu | AluY |
CAediting_654036 | chr8_100928113_- | SINE | Alu | AluY |
CAediting_654037 | chr8_100928158_- | SINE | Alu | AluY |
CAediting_654038 | chr8_100928168_- | SINE | Alu | AluY |
CAediting_654039 | chr8_100928180_- | SINE | Alu | AluY |
CAediting_654040 | chr8_100928217_- | SINE | Alu | AluY |
CAediting_654041 | chr8_100928228_- | SINE | Alu | AluY |
CAediting_654042 | chr8_100928233_- | SINE | Alu | AluY |
CAediting_654043 | chr8_100928278_- | SINE | Alu | AluY |
CAediting_654044 | chr8_100928459_- | SINE | Alu | AluSq2 |
CAediting_654045 | chr8_100928469_- | SINE | Alu | AluSq2 |
CAediting_654046 | chr8_100928487_- | SINE | Alu | AluSq2 |
CAediting_654047 | chr8_100928515_- | SINE | Alu | AluSq2 |
CAediting_654048 | chr8_100928559_- | SINE | Alu | AluSq2 |
CAediting_654049 | chr8_100928575_- | SINE | Alu | AluSq2 |
CAediting_654050 | chr8_100928585_- | SINE | Alu | AluSq2 |
CAediting_654051 | chr8_100928598_- | SINE | Alu | AluSq2 |
CAediting_654052 | chr8_100928633_- | SINE | Alu | AluSq2 |
CAediting_654053 | chr8_100928681_- | SINE | Alu | AluSq2 |
CAediting_654054 | chr8_100928686_- | SINE | Alu | AluSq2 |
CAediting_654055 | chr8_100928733_- | SINE | Alu | AluSq2 |
CAediting_654056 | chr8_100929230_- | SINE | Alu | AluSx |
CAediting_654057 | chr8_100929265_- | SINE | Alu | AluSx |
CAediting_654058 | chr8_100929276_- | SINE | Alu | AluSx |
CAediting_654059 | chr8_100929289_- | SINE | Alu | AluSx |
CAediting_654060 | chr8_100929292_- | SINE | Alu | AluSx |
CAediting_654061 | chr8_100929296_- | SINE | Alu | AluSx |
CAediting_654062 | chr8_100929297_- | SINE | Alu | AluSx |
CAediting_654063 | chr8_100929304_- | SINE | Alu | AluSx |
CAediting_654064 | chr8_100929305_- | SINE | Alu | AluSx |
CAediting_654065 | chr8_100929311_- | SINE | Alu | AluSx |
CAediting_654066 | chr8_100929315_- | SINE | Alu | AluSx |
CAediting_654067 | chr8_100929321_- | SINE | Alu | AluSx |
CAediting_654068 | chr8_100929324_- | SINE | Alu | AluSx |
CAediting_654069 | chr8_100929328_- | SINE | Alu | AluSx |
CAediting_654070 | chr8_100929332_- | SINE | Alu | AluSx |
CAediting_654071 | chr8_100929337_- | SINE | Alu | AluSx |
CAediting_654072 | chr8_100929338_- | SINE | Alu | AluSx |
CAediting_654073 | chr8_100929348_- | SINE | Alu | AluSx |
CAediting_654074 | chr8_100929356_- | SINE | Alu | AluSx |
CAediting_654075 | chr8_100929364_- | SINE | Alu | AluSx |
CAediting_654076 | chr8_100929368_- | SINE | Alu | AluSx |
CAediting_654077 | chr8_100929369_- | SINE | Alu | AluSx |
CAediting_654078 | chr8_100929373_- | SINE | Alu | AluSx |
CAediting_654079 | chr8_100929377_- | SINE | Alu | AluSx |
CAediting_654080 | chr8_100929378_- | SINE | Alu | AluSx |
CAediting_654081 | chr8_100929379_- | SINE | Alu | AluSx |
CAediting_654082 | chr8_100929393_- | SINE | Alu | AluSx |
CAediting_654083 | chr8_100929404_- | SINE | Alu | AluSx |
CAediting_654084 | chr8_100929413_- | SINE | Alu | AluSx |
CAediting_654085 | chr8_100929416_- | SINE | Alu | AluSx |
CAediting_654086 | chr8_100929418_- | SINE | Alu | AluSx |
CAediting_654087 | chr8_100929419_- | SINE | Alu | AluSx |
CAediting_654088 | chr8_100929424_- | SINE | Alu | AluSx |
CAediting_654089 | chr8_100929425_- | SINE | Alu | AluSx |
CAediting_654090 | chr8_100929427_- | SINE | Alu | AluSx |
CAediting_654091 | chr8_100929431_- | SINE | Alu | AluSx |
CAediting_654092 | chr8_100929432_- | SINE | Alu | AluSx |
CAediting_654093 | chr8_100929446_- | SINE | Alu | AluSx |
CAediting_654094 | chr8_100929450_- | SINE | Alu | AluSx |
CAediting_654095 | chr8_100929456_- | SINE | Alu | AluSx |
CAediting_654096 | chr8_100929464_- | SINE | Alu | AluSx |
CAediting_654097 | chr8_100929467_- | SINE | Alu | AluSx |
CAediting_654098 | chr8_100929473_- | SINE | Alu | AluSx |
CAediting_654099 | chr8_100929490_- | SINE | Alu | AluSx |
CAediting_654100 | chr8_100930151_- | SINE | Alu | AluSx4 |
CAediting_654101 | chr8_100930161_- | SINE | Alu | AluSx4 |
CAediting_654102 | chr8_100930167_- | SINE | Alu | AluSx4 |
CAediting_654103 | chr8_100930195_- | SINE | Alu | AluSx4 |
CAediting_654104 | chr8_100930196_- | SINE | Alu | AluSx4 |
CAediting_654105 | chr8_100930201_- | SINE | Alu | AluSx4 |
CAediting_654106 | chr8_100930207_- | SINE | Alu | AluSx4 |
CAediting_654107 | chr8_100930208_- | SINE | Alu | AluSx4 |
CAediting_654108 | chr8_100930210_- | SINE | Alu | AluSx4 |
CAediting_654109 | chr8_100930218_- | SINE | Alu | AluSx4 |
CAediting_654110 | chr8_100930237_- | SINE | Alu | AluSx4 |
CAediting_654111 | chr8_100930247_- | SINE | Alu | AluSx4 |
CAediting_654112 | chr8_100930252_- | SINE | Alu | AluSx4 |
CAediting_654113 | chr8_100930263_- | SINE | Alu | AluSx4 |
CAediting_654114 | chr8_100930266_- | SINE | Alu | AluSx4 |
CAediting_654115 | chr8_100930268_- | SINE | Alu | AluSx4 |
CAediting_654116 | chr8_100930269_- | SINE | Alu | AluSx4 |
CAediting_654117 | chr8_100930272_- | SINE | Alu | AluSx4 |
CAediting_654118 | chr8_100930274_- | SINE | Alu | AluSx4 |
CAediting_654119 | chr8_100930275_- | SINE | Alu | AluSx4 |
CAediting_654120 | chr8_100930276_- | SINE | Alu | AluSx4 |
CAediting_654121 | chr8_100930277_- | SINE | Alu | AluSx4 |
CAediting_654122 | chr8_100930278_- | SINE | Alu | AluSx4 |
CAediting_654123 | chr8_100930281_- | SINE | Alu | AluSx4 |
CAediting_654124 | chr8_100930298_- | SINE | Alu | AluSx4 |
CAediting_654125 | chr8_100930302_- | SINE | Alu | AluSx4 |
CAediting_654126 | chr8_100930318_- | SINE | Alu | AluSx4 |
CAediting_654127 | chr8_100930331_- | SINE | Alu | AluSx4 |
CAediting_654128 | chr8_100930334_- | SINE | Alu | AluSx4 |
CAediting_654129 | chr8_100930364_- | SINE | Alu | AluSx4 |
CAediting_654130 | chr8_100930369_- | SINE | Alu | AluSx4 |
CAediting_654131 | chr8_100930370_- | SINE | Alu | AluSx4 |
CAediting_654132 | chr8_100933116_- | SINE | Alu | AluSg4 |
CAediting_654133 | chr8_100933179_- | SINE | Alu | AluSg4 |
CAediting_654134 | chr8_100933211_- | SINE | Alu | AluSg4 |
CAediting_654135 | chr8_100933276_- | SINE | Alu | AluSg4 |
CAediting_654136 | chr8_100933744_- | SINE | Alu | AluJr |
CAediting_654137 | chr8_100933778_- | SINE | Alu | AluJr |
CAediting_654138 | chr8_100933787_- | SINE | Alu | AluJr |
CAediting_654139 | chr8_100933927_- | SINE | Alu | AluSz |
CAediting_654140 | chr8_100933964_- | SINE | Alu | AluSz |
CAediting_654141 | chr8_100934046_- | SINE | Alu | AluSz |
CAediting_654142 | chr8_100934250_- | SINE | Alu | AluJr |
CAediting_654143 | chr8_100934471_- | SINE | Alu | AluSx1 |
CAediting_654144 | chr8_100934475_- | SINE | Alu | AluSx1 |
CAediting_654145 | chr8_100934513_- | SINE | Alu | AluSx1 |
CAediting_654146 | chr8_100934518_- | SINE | Alu | AluSx1 |
CAediting_654147 | chr8_100934553_- | SINE | Alu | AluSx1 |
CAediting_654148 | chr8_100934577_- | SINE | Alu | AluSx1 |
CAediting_654149 | chr8_100934579_- | SINE | Alu | AluSx1 |
CAediting_654150 | chr8_100934589_- | SINE | Alu | AluSx1 |
CAediting_654151 | chr8_100934618_- | SINE | Alu | AluSx1 |
CAediting_654152 | chr8_100935029_- | SINE | Alu | AluSx |
CAediting_654153 | chr8_100935031_- | SINE | Alu | AluSx |
CAediting_654154 | chr8_100935041_- | SINE | Alu | AluSx |
CAediting_654155 | chr8_100935067_- | SINE | Alu | AluSx |
CAediting_654156 | chr8_100935070_- | SINE | Alu | AluSx |
CAediting_654157 | chr8_100935100_- | SINE | Alu | AluSx |
CAediting_654158 | chr8_100935111_- | SINE | Alu | AluSx |
CAediting_654159 | chr8_100935113_- | SINE | Alu | AluSx |
CAediting_654160 | chr8_100936679_- | SINE | Alu | AluSx1 |
CAediting_654161 | chr8_100936791_- | SINE | Alu | AluSx1 |
CAediting_654162 | chr8_100939537_- | SINE | Alu | AluSp |
CAediting_654163 | chr8_100939770_- | SINE | Alu | AluY |
CAediting_654164 | chr8_100941540_- | SINE | Alu | AluSx1 |
CAediting_654165 | chr8_100943797_- | SINE | Alu | AluY |
CAediting_654166 | chr8_100943865_- | SINE | Alu | AluY |
CAediting_654167 | chr8_100946282_- | SINE | Alu | AluSq2 |
CAediting_654168 | chr8_100946370_- | SINE | Alu | AluSq2 |
CAediting_654169 | chr8_100946382_- | SINE | Alu | AluSq2 |
CAediting_654170 | chr8_100946383_- | SINE | Alu | AluSq2 |
CAediting_654171 | chr8_100946387_- | SINE | Alu | AluSq2 |
CAediting_654172 | chr8_100946450_- | SINE | Alu | AluSq2 |
CAediting_654173 | chr8_100946465_- | SINE | Alu | AluSq2 |
CAediting_654174 | chr8_100946488_- | SINE | Alu | AluSq2 |
CAediting_654175 | chr8_100946499_- | SINE | Alu | AluSq2 |
CAediting_654176 | chr8_100946507_- | SINE | Alu | AluSq2 |
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RNA A-to-I editing events in the alternative splicing sites for YWHAZ |
RNA A-to-I editing(s) in the alternative splicing sites. |
AStype | CAeditomID | Editing position | AS position | AS direction | Exonic location | Wildtype sequence | Wildtype splicing strength | RNA edited sequence | RNA edited splicing strength |
Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000164924.16.YWHAZ. |
Correlation between RNA A-to-I editing and PSI for ENSG00000164924.16.YWHAZ. |
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Differntial gene expression between RNA A-to-I edited versus non-edited samples for YWHAZ |
Differential gene expressions between RNA A-to-I edited and non-edited tumor samples. * The grey color means N/A. |
Correlation between RNA A-to-I editing and gene expression. |
- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples. * Click on the image to enlarge it in a new window. |
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Protein coding region RNA A-to-I editings for YWHAZ |
- Lollipop plot for RNA A-to-I editings across protein structure. * Click on the image to enlarge it in a new window. |
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The effects of the RNA editing to the miRNA binding sites for YWHAZ |
**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page. |
RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_653949 | chr8_100917607_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4691-3p | 100917603 | 100917609 | 7mer-m8 | 100917602 | 100917623 | 146.00 | -24.44 |
CAediting_653949 | chr8_100917607_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6500-3p | 100917607 | 100917612 | 6mer | 100917606 | 100917626 | 144.00 | -14.99 |
CAediting_653946 | chr8_100917561_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4719 | 100917561 | 100917567 | 7mer-m8 | 100917560 | 100917581 | 141.00 | -11.61 |
CAediting_653953 | chr8_100917632_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1255b-2-3p | 100917631 | 100917637 | 7mer-m8 | 100917630 | 100917651 | 141.00 | -13.14 |
CAediting_653953 | chr8_100917632_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-146a-5p | 100917627 | 100917632 | 6mer | 100917626 | 100917648 | 141.00 | -16.62 |
CAediting_653953 | chr8_100917632_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-589-5p | 100917627 | 100917633 | 7mer-m8 | 100917626 | 100917646 | 170.00 | -23.93 |
CAediting_653954 | chr8_100917637_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-508-5p | 100917634 | 100917640 | 7mer-m8 | 100917633 | 100917657 | 141.00 | -19.44 |
CAediting_653954 | chr8_100917637_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6512-3p | 100917636 | 100917642 | 7mer-m8 | 100917635 | 100917656 | 140.00 | -20.56 |
CAediting_653954 | chr8_100917637_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6720-5p | 100917636 | 100917642 | 7mer-m8 | 100917635 | 100917656 | 160.00 | -24.72 |
CAediting_653954 | chr8_100917637_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6849-3p | 100917636 | 100917643 | 8mer-1a | 100917636 | 100917657 | 147.00 | -15.97 |
CAediting_653954 | chr8_100917637_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-766-3p | 100917635 | 100917641 | 7mer-m8 | 100917634 | 100917655 | 145.00 | -17.87 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1247-3p | 100917641 | 100917647 | 7mer-m8 | 100917640 | 100917662 | 144.00 | -21.49 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3940-3p | 100917639 | 100917645 | 7mer-m8 | 100917638 | 100917659 | 140.00 | -18.92 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6746-5p | 100917643 | 100917648 | 6mer | 100917642 | 100917663 | 146.00 | -30.44 |
CAediting_653956 | chr8_100917656_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-17-3p | 100917656 | 100917662 | 7mer-m8 | 100917655 | 100917676 | 150.00 | -18.58 |
CAediting_653956 | chr8_100917656_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3929 | 100917653 | 100917658 | 6mer | 100917652 | 100917676 | 140.00 | -21.96 |
CAediting_653957 | chr8_100917693_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3940-3p | 100917689 | 100917695 | 7mer-m8 | 100917688 | 100917709 | 140.00 | -19.73 |
CAediting_653958 | chr8_100917717_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-371b-5p | 100917714 | 100917721 | 8mer-1a | 100917714 | 100917736 | 149.00 | -13.57 |
CAediting_653958 | chr8_100917717_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-373-5p | 100917714 | 100917721 | 8mer-1a | 100917714 | 100917734 | 142.00 | -12.39 |
CAediting_653958 | chr8_100917717_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-616-5p | 100917714 | 100917721 | 8mer-1a | 100917714 | 100917735 | 142.00 | -7.40 |
CAediting_653959 | chr8_100918078_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6847-3p | 100918075 | 100918081 | 7mer-m8 | 100918074 | 100918096 | 153.00 | -22.19 |
CAediting_653961 | chr8_100918086_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-106a-3p | 100918084 | 100918089 | 6mer | 100918083 | 100918104 | 141.00 | -21.13 |
CAediting_653962 | chr8_100918098_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3189-3p | 100918097 | 100918103 | 7mer-m8 | 100918096 | 100918115 | 149.00 | -19.09 |
CAediting_653962 | chr8_100918098_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6813-3p | 100918096 | 100918102 | 7mer-m8 | 100918095 | 100918115 | 140.00 | -10.68 |
CAediting_653963 | chr8_100918107_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3929 | 100918104 | 100918110 | 7mer-m8 | 100918103 | 100918125 | 158.00 | -18.95 |
CAediting_653963 | chr8_100918107_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4478 | 100918104 | 100918110 | 7mer-m8 | 100918103 | 100918119 | 154.00 | -23.40 |
CAediting_653963 | chr8_100918107_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-485-5p | 100918103 | 100918109 | 7mer-m8 | 100918102 | 100918123 | 144.00 | -16.96 |
CAediting_653963 | chr8_100918107_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6884-5p | 100918103 | 100918109 | 7mer-m8 | 100918102 | 100918123 | 162.00 | -25.23 |
CAediting_653965 | chr8_100918121_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1288-3p | 100918118 | 100918124 | 7mer-m8 | 100918117 | 100918138 | 160.00 | -26.36 |
CAediting_653965 | chr8_100918121_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-5002-3p | 100918119 | 100918125 | 7mer-m8 | 100918118 | 100918138 | 147.00 | -13.14 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-340-3p | 100918170 | 100918176 | 7mer-m8 | 100918169 | 100918190 | 149.00 | -18.07 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6827-3p | 100918170 | 100918176 | 7mer-m8 | 100918169 | 100918189 | 153.00 | -18.20 |
CAediting_653969 | chr8_100918260_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6078 | 100918256 | 100918263 | 8mer-1a | 100918256 | 100918275 | 155.00 | -24.00 |
CAediting_653971 | chr8_100918280_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-485-5p | 100918276 | 100918282 | 7mer-m8 | 100918275 | 100918302 | 143.00 | -21.67 |
CAediting_653971 | chr8_100918280_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6884-5p | 100918276 | 100918282 | 7mer-m8 | 100918275 | 100918298 | 143.00 | -21.46 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3940-3p | 100918313 | 100918319 | 7mer-m8 | 100918312 | 100918333 | 155.00 | -18.05 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1273c | 100918320 | 100918325 | 6mer | 100918319 | 100918340 | 143.00 | -23.68 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1285-3p | 100918316 | 100918321 | 6mer | 100918315 | 100918336 | 152.00 | -26.10 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1285-3p | 100918316 | 100918321 | 6mer | 100918315 | 100918336 | 152.00 | -26.10 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4486 | 100918316 | 100918322 | 7mer-m8 | 100918315 | 100918331 | 145.00 | -19.61 |
CAediting_653942 | chr8_100917475_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3189-3p | 100917474 | 100917480 | 7mer-m8 | 100917473 | 100917492 | 149.00 | -22.73 |
CAediting_653942 | chr8_100917475_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6813-3p | 100917473 | 100917479 | 7mer-m8 | 100917472 | 100917492 | 140.00 | -11.60 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-326 | 100917474 | 100917480 | 7mer-m8 | 100917473 | 100917492 | 140.00 | -13.37 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-330-5p | 100917474 | 100917480 | 7mer-m8 | 100917473 | 100917494 | 140.00 | -20.32 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4314 | 100917475 | 100917481 | 7mer-m8 | 100917474 | 100917491 | 140.00 | -21.18 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-514a-5p | 100917473 | 100917479 | 7mer-m8 | 100917472 | 100917495 | 146.00 | -18.76 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-514a-5p | 100917473 | 100917479 | 7mer-m8 | 100917472 | 100917495 | 146.00 | -18.76 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-514a-5p | 100917473 | 100917479 | 7mer-m8 | 100917472 | 100917495 | 146.00 | -18.76 |
RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-10a-5p | 100918167 | 100918173 | 7mer-m8 | 100918166 | 100918188 | 145 | -13.67 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-10b-5p | 100918167 | 100918173 | 7mer-m8 | 100918166 | 100918188 | 140 | -12.49 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1262 | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918337 | 142 | -16.42 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-1262 | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918337 | 142 | -16.42 |
CAediting_653953 | chr8_100917632_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-34b-3p | 100917630 | 100917636 | 7mer-m8 | 100917629 | 100917650 | 140 | -9.81 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3689a-3p | 100917643 | 100917649 | 7mer-m8 | 100917642 | 100917665 | 143 | -21.33 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3689b-3p | 100917643 | 100917649 | 7mer-m8 | 100917642 | 100917662 | 150 | -23.42 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-3689c | 100917643 | 100917649 | 7mer-m8 | 100917642 | 100917662 | 150 | -23.42 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4421 | 100918169 | 100918175 | 7mer-m8 | 100918168 | 100918189 | 154 | -16.72 |
CAediting_653952 | chr8_100917619_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4478 | 100917615 | 100917621 | 7mer-m8 | 100917614 | 100917629 | 149 | -25.05 |
CAediting_653957 | chr8_100917693_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4486 | 100917692 | 100917698 | 7mer-m8 | 100917691 | 100917707 | 155 | -24.37 |
CAediting_653959 | chr8_100918078_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4633-5p | 100918077 | 100918084 | 8mer-1a | 100918077 | 100918094 | 151 | -15.91 |
CAediting_653960 | chr8_100918080_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4633-5p | 100918077 | 100918084 | 8mer-1a | 100918077 | 100918094 | 151 | -15.91 |
CAediting_653952 | chr8_100917619_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4649-3p | 100917618 | 100917624 | 7mer-m8 | 100917617 | 100917637 | 140 | -14.11 |
CAediting_653967 | chr8_100918177_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4684-5p | 100918173 | 100918179 | 7mer-m8 | 100918172 | 100918194 | 155 | -15.04 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4701-3p | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918336 | 149 | -19.07 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4701-3p | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918336 | 149 | -19.07 |
CAediting_653951 | chr8_100917611_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4737 | 100917610 | 100917617 | 8mer-1a | 100917610 | 100917628 | 152 | -18.49 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-542-3p | 100918320 | 100918326 | 7mer-m8 | 100918319 | 100918339 | 152 | -13.23 |
CAediting_653949 | chr8_100917607_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-5690 | 100917603 | 100917609 | 7mer-m8 | 100917602 | 100917622 | 145 | -16.74 |
CAediting_653947 | chr8_100917567_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-5692a | 100917564 | 100917570 | 7mer-m8 | 100917563 | 100917587 | 155 | -18.49 |
CAediting_653947 | chr8_100917567_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-5692a | 100917564 | 100917570 | 7mer-m8 | 100917563 | 100917587 | 155 | -18.49 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-5699-3p | 100918169 | 100918175 | 7mer-m8 | 100918168 | 100918189 | 153 | -18.62 |
CAediting_653971 | chr8_100918280_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6086 | 100918276 | 100918282 | 7mer-m8 | 100918275 | 100918294 | 142 | -21.16 |
CAediting_653960 | chr8_100918080_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6514-3p | 100918080 | 100918086 | 7mer-m8 | 100918079 | 100918099 | 155 | -17.54 |
CAediting_653956 | chr8_100917656_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6516-5p | 100917656 | 100917662 | 7mer-m8 | 100917655 | 100917677 | 151 | -13.13 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-661 | 100918314 | 100918320 | 7mer-m8 | 100918313 | 100918336 | 150 | -20.75 |
CAediting_653957 | chr8_100917693_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-661 | 100917690 | 100917696 | 7mer-m8 | 100917689 | 100917712 | 141 | -19.78 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-661 | 100917640 | 100917646 | 7mer-m8 | 100917639 | 100917662 | 140 | -20.57 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6736-5p | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918338 | 148 | -22.97 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6736-5p | 100918317 | 100918323 | 7mer-m8 | 100918316 | 100918338 | 148 | -22.97 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6742-3p | 100918315 | 100918321 | 7mer-m8 | 100918314 | 100918333 | 140 | -13.94 |
CAediting_653973 | chr8_100918317_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6776-5p | 100918316 | 100918322 | 7mer-m8 | 100918315 | 100918334 | 152 | -22.73 |
CAediting_653974 | chr8_100918321_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6776-5p | 100918316 | 100918322 | 7mer-m8 | 100918315 | 100918334 | 152 | -22.73 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6779-5p | 100917643 | 100917649 | 7mer-m8 | 100917642 | 100917661 | 155 | -27.38 |
CAediting_653955 | chr8_100917643_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6780a-5p | 100917643 | 100917649 | 7mer-m8 | 100917642 | 100917666 | 155 | -28.21 |
CAediting_653966 | chr8_100918171_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6818-3p | 100918171 | 100918177 | 7mer-m8 | 100918170 | 100918190 | 146 | -17.27 |
CAediting_653952 | chr8_100917619_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-7160-5p | 100917617 | 100917623 | 7mer-m8 | 100917616 | 100917636 | 146 | -17.63 |
CAediting_653941 | chr8_100917466_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-7977 | 100917466 | 100917472 | 7mer-m8 | 100917465 | 100917482 | 140 | -13.07 |
CAediting_653943 | chr8_100917476_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-887-5p | 100917475 | 100917482 | 8mer-1a | 100917475 | 100917495 | 147 | -13.82 |
CAediting_653957 | chr8_100917693_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-939-3p | 100917691 | 100917697 | 7mer-m8 | 100917690 | 100917710 | 140 | -15.42 |
RNA A-to-I editing in lncRNA gained miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in lncRNA lost miRNA binding sites. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs lost binding to lncRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_393 | chr1_1167164_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-200b-3p | 100919334 | 100919340 | 7mer-1a | 100919334 | 100919357 | 155 | -24.88 |
CAediting_688080 | chr9_63819626_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4477b | 100918803 | 100918809 | 7mer-m8 | 100918802 | 100918821 | 147 | -10.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000164924.16 | ENST00000457309 | hsa-miR-200b-3p | 100919334 | 100919340 | 7mer-1a | 100919334 | 100919357 | 155 | -24.88 |
CAediting_688080 | chr9_63819626_+ | ENSG00000164924.16 | ENST00000457309 | hsa-miR-4477b | 100918803 | 100918809 | 7mer-m8 | 100918802 | 100918821 | 147 | -10.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000164924.16 | ENST00000395956 | hsa-miR-200b-3p | 100919334 | 100919340 | 7mer-1a | 100919334 | 100919357 | 155 | -24.88 |
CAediting_688080 | chr9_63819626_+ | ENSG00000164924.16 | ENST00000395956 | hsa-miR-4477b | 100918803 | 100918809 | 7mer-m8 | 100918802 | 100918821 | 147 | -10.72 |
CAediting_393 | chr1_1167164_+ | ENSG00000164924.16 | ENST00000353245 | hsa-miR-200b-3p | 100919334 | 100919340 | 7mer-1a | 100919334 | 100919357 | 155 | -24.88 |
CAediting_688080 | chr9_63819626_+ | ENSG00000164924.16 | ENST00000353245 | hsa-miR-4477b | 100918803 | 100918809 | 7mer-m8 | 100918802 | 100918821 | 147 | -10.72 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100918564 | 100918569 | 6mer | 100918563 | 100918589 | 146 | -19.71 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100918141 | 100918147 | 7mer-m8 | 100918140 | 100918164 | 140 | -10.6 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100917329 | 100917335 | 7mer-m8 | 100917328 | 100917353 | 157 | -14.58 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100917054 | 100917061 | 8mer-1a | 100917054 | 100917078 | 149 | -11.12 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100916621 | 100916628 | 8mer-1a | 100916621 | 100916643 | 160 | -11.39 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-195-3p | 100916540 | 100916546 | 7mer-m8 | 100916539 | 100916560 | 146 | -17.04 |
CAediting_1351755 | chr19_40282625_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-641 | 100916751 | 100916757 | 7mer-m8 | 100916750 | 100916773 | 145 | -15.54 |
CAediting_77128 | chr1_85133844_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4423-3p | 100917441 | 100917447 | 7mer-m8 | 100917440 | 100917460 | 140 | -14.31 |
CAediting_396018 | chr5_1062918_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-4635 | 100918801 | 100918808 | 8mer-1a | 100918801 | 100918821 | 140 | -13.76 |
CAediting_524911 | chr7_5495852_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-589-3p | 100918324 | 100918330 | 7mer-m8 | 100918323 | 100918347 | 161 | -20.72 |
CAediting_396018 | chr5_1062918_- | ENSG00000164924.16 | ENST00000457309 | hsa-miR-4635 | 100918801 | 100918808 | 8mer-1a | 100918801 | 100918821 | 140 | -13.76 |
CAediting_396018 | chr5_1062918_- | ENSG00000164924.16 | ENST00000395956 | hsa-miR-4635 | 100918801 | 100918808 | 8mer-1a | 100918801 | 100918821 | 140 | -13.76 |
CAediting_396018 | chr5_1062918_- | ENSG00000164924.16 | ENST00000353245 | hsa-miR-4635 | 100918801 | 100918808 | 8mer-1a | 100918801 | 100918821 | 140 | -13.76 |
CAediting_468389 | chr6_31355314_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-6891-5p | 100917646 | 100917651 | 6mer | 100917645 | 100917663 | 145 | -21.37 |
RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA. |
CAeditom_ID | Position | ENSG | ENST | miRNA | Targetscan start | Targetscan end | Targetscan score | Miranda start | Miranda end | Miranda score | Miranda energy |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-195-3p | 100918735 | 100918742 | 8mer-1a | 100918735 | 100918756 | 152 | -7.5 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000395957 | hsa-miR-195-3p | 100918630 | 100918636 | 7mer-m8 | 100918629 | 100918650 | 141 | -10.63 |
CAediting_393 | chr1_1167164_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-200b-3p | 100916601 | 100916606 | 6mer | 100916600 | 100916621 | 143 | -10.14 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229413 | chr17_67471544_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1229414 | chr17_67471546_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_228905 | chr2_188297554_+ | ENSG00000164924.16 | ENST00000395957 | hsa-miR-561-3p | 100917094 | 100917100 | 7mer-m8 | 100917093 | 100917117 | 154 | -19.44 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000457309 | hsa-miR-195-3p | 100918735 | 100918742 | 8mer-1a | 100918735 | 100918756 | 152 | -7.5 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000457309 | hsa-miR-195-3p | 100918630 | 100918636 | 7mer-m8 | 100918629 | 100918650 | 141 | -10.63 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000457309 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000457309 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000395956 | hsa-miR-195-3p | 100918735 | 100918742 | 8mer-1a | 100918735 | 100918756 | 152 | -7.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000395956 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000395956 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1160181 | chr17_7017644_- | ENSG00000164924.16 | ENST00000353245 | hsa-miR-195-3p | 100918735 | 100918742 | 8mer-1a | 100918735 | 100918756 | 152 | -7.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000353245 | hsa-miR-548aa | 100919296 | 100919302 | 7mer-m8 | 100919295 | 100919319 | 154 | -9.5 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000353245 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000522542 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
CAediting_1229415 | chr17_67471547_+ | ENSG00000164924.16 | ENST00000521309 | hsa-miR-548aa | 100920544 | 100920550 | 7mer-m8 | 100920543 | 100920567 | 150 | -12.15 |
Differentially expressed gene-miRNA network |
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The effects of the RNA editing to the stability of the RNA structures for YWHAZ |
- RNA A-to-I editing in mRNA. * Click on the image to enlarge it in a new window. |
ENST | ENST type | RNA structure without RNA A-to-I editing. | RNA structure with RNA A-to-I editing. |
ENST00000395957.5 | protein_coding | ||
ENST00000522819.4 | protein_coding | ||
ENST00000480304.4 | retained_intron |
RNA A-to-I editing in RNA structures for Minimum free energy (MFE). |
CAeditom_ID | ENST | Editing_Position | MFE_withoneAI | MFE_withoutAI | MFE_withmultipleAI |
CAediting_653940 | ENST00000395957.5 | chr8_100917461_- | -1459.60 | -1455.80 | -1507.60 |
CAediting_653941 | ENST00000395957.5 | chr8_100917466_- | -1458.40 | -1455.80 | -1507.60 |
CAediting_653942 | ENST00000395957.5 | chr8_100917475_- | -1461.30 | -1455.80 | -1507.60 |
CAediting_653943 | ENST00000395957.5 | chr8_100917476_- | -1458.50 | -1455.80 | -1507.60 |
CAediting_653944 | ENST00000395957.5 | chr8_100917552_- | -1459.10 | -1455.80 | -1507.60 |
CAediting_653945 | ENST00000395957.5 | chr8_100917555_- | -1459.30 | -1455.80 | -1507.60 |
CAediting_653946 | ENST00000395957.5 | chr8_100917561_- | -1457.60 | -1455.80 | -1507.60 |
CAediting_653947 | ENST00000395957.5 | chr8_100917567_- | -1458.40 | -1455.80 | -1507.60 |
CAediting_653948 | ENST00000395957.5 | chr8_100917570_- | -1456.30 | -1455.80 | -1507.60 |
CAediting_653949 | ENST00000395957.5 | chr8_100917607_- | -1457.90 | -1455.80 | -1507.60 |
CAediting_653950 | ENST00000395957.5 | chr8_100917610_- | -1457.00 | -1455.80 | -1507.60 |
CAediting_653951 | ENST00000395957.5 | chr8_100917611_- | -1458.50 | -1455.80 | -1507.60 |
CAediting_653952 | ENST00000395957.5 | chr8_100917619_- | -1455.10 | -1455.80 | -1507.60 |
CAediting_653953 | ENST00000395957.5 | chr8_100917632_- | -1458.70 | -1455.80 | -1507.60 |
CAediting_653954 | ENST00000395957.5 | chr8_100917637_- | -1460.20 | -1455.80 | -1507.60 |
CAediting_653955 | ENST00000395957.5 | chr8_100917643_- | -1458.20 | -1455.80 | -1507.60 |
CAediting_653956 | ENST00000395957.5 | chr8_100917656_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653957 | ENST00000395957.5 | chr8_100917693_- | -1457.80 | -1455.80 | -1507.60 |
CAediting_653958 | ENST00000395957.5 | chr8_100917717_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653959 | ENST00000395957.5 | chr8_100918078_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653960 | ENST00000395957.5 | chr8_100918080_- | -1456.60 | -1455.80 | -1507.60 |
CAediting_653961 | ENST00000395957.5 | chr8_100918086_- | -1456.90 | -1455.80 | -1507.60 |
CAediting_653962 | ENST00000395957.5 | chr8_100918098_- | -1458.40 | -1455.80 | -1507.60 |
CAediting_653963 | ENST00000395957.5 | chr8_100918107_- | -1456.80 | -1455.80 | -1507.60 |
CAediting_653964 | ENST00000395957.5 | chr8_100918108_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653965 | ENST00000395957.5 | chr8_100918121_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653966 | ENST00000395957.5 | chr8_100918171_- | -1455.10 | -1455.80 | -1507.60 |
CAediting_653967 | ENST00000395957.5 | chr8_100918177_- | -1458.00 | -1455.80 | -1507.60 |
CAediting_653968 | ENST00000395957.5 | chr8_100918180_- | -1456.20 | -1455.80 | -1507.60 |
CAediting_653969 | ENST00000395957.5 | chr8_100918260_- | -1459.90 | -1455.80 | -1507.60 |
CAediting_653970 | ENST00000395957.5 | chr8_100918261_- | -1457.40 | -1455.80 | -1507.60 |
CAediting_653971 | ENST00000395957.5 | chr8_100918280_- | -1460.00 | -1455.80 | -1507.60 |
CAediting_653972 | ENST00000395957.5 | chr8_100918296_- | -1459.30 | -1455.80 | -1507.60 |
CAediting_653973 | ENST00000395957.5 | chr8_100918317_- | -1455.80 | -1455.80 | -1507.60 |
CAediting_653974 | ENST00000395957.5 | chr8_100918321_- | -1456.40 | -1455.80 | -1507.60 |
CAediting_654152 | ENST00000522819.4 | chr8_100935029_- | -212.30 | -210.90 | -214.50 |
CAediting_654153 | ENST00000522819.4 | chr8_100935031_- | -210.90 | -210.90 | -214.50 |
CAediting_654154 | ENST00000522819.4 | chr8_100935041_- | -212.10 | -210.90 | -214.50 |
CAediting_653993 | ENST00000480304.4 | chr8_100922449_- | -589.90 | -589.90 | -590.00 |
CAediting_653994 | ENST00000480304.4 | chr8_100922463_- | -589.20 | -589.90 | -590.00 |
CAediting_653995 | ENST00000480304.4 | chr8_100922472_- | -592.50 | -589.90 | -590.00 |
CAediting_653996 | ENST00000480304.4 | chr8_100922507_- | -590.30 | -589.90 | -590.00 |
CAediting_653997 | ENST00000480304.4 | chr8_100922523_- | -588.50 | -589.90 | -590.00 |
CAediting_653998 | ENST00000480304.4 | chr8_100922605_- | -589.90 | -589.90 | -590.00 |
CAediting_653999 | ENST00000480304.4 | chr8_100922613_- | -589.10 | -589.90 | -590.00 |
CAediting_654000 | ENST00000480304.4 | chr8_100922640_- | -589.60 | -589.90 | -590.00 |
CAediting_654001 | ENST00000480304.4 | chr8_100922656_- | -589.90 | -589.90 | -590.00 |
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Relation with ADAR for YWHAZ |
Correlation between ADAR gene expression and RNA editing frequency |
Cancer | CAeditomID | position | ADAR1 (p-val) | ADAR1 (coeff.) | ADAR2 (p-val) | ADAR2 (coeff.) | ADAR3 (p-val) | ADAR3 (coeff.) |
BRCA | CAediting_653990 | chr8_100921687_- | 0.00299984460621105 | 0.403694913889358 | . | . | . | . |
ESCA | CAediting_654068 | chr8_100929324_- | . | . | 0.0124782991117486 | 0.347473204303898 | . | . |
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Relation with cancer stages for YWHAZ |
Correlation between Cancer stages and RNA editing frequency |
Cancer | Stage_type | CAeditomID | position | P-val | Coeff. |
ESCA | clinical_stage | CAediting_654035 | chr8_100928098_- | 0.00588476190198278 | -0.655050132357049 |
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Relation with survival for YWHAZ |
Correlation between RNA editing and survival |
Cancer | CAeditomID | position | KMpvalue | Coxpvalue | CoxHR |
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RelatedDrugs for YWHAZ |
Approved drugs targeting this gene. (DrugBank Version 5.1.8 2021-01-03) |
Gene | UniProtAcc | DrugBank ID | Drug name | Drug activity | Drug type | Drug status |
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RelatedDiseases for YWHAZ |
Diseases associated with this gene. (DisGeNet 7.0) |
Gene | Disease ID | Disease name | # pubmeds | Source |
YWHAZ | C0005586 | Bipolar Disorder | 5 | PSYGENET |
YWHAZ | C0007097 | Carcinoma | 1 | CTD_human |
YWHAZ | C0023893 | Liver Cirrhosis, Experimental | 1 | CTD_human |
YWHAZ | C0024667 | Animal Mammary Neoplasms | 1 | CTD_human |
YWHAZ | C0024668 | Mammary Neoplasms, Experimental | 1 | CTD_human |
YWHAZ | C0027643 | Neoplasm Recurrence, Local | 1 | CTD_human |
YWHAZ | C0036349 | Paranoid Schizophrenia | 1 | PSYGENET |
YWHAZ | C0205696 | Anaplastic carcinoma | 1 | CTD_human |
YWHAZ | C0205697 | Carcinoma, Spindle-Cell | 1 | CTD_human |
YWHAZ | C0205698 | Undifferentiated carcinoma | 1 | CTD_human |
YWHAZ | C0205699 | Carcinomatosis | 1 | CTD_human |
YWHAZ | C1257925 | Mammary Carcinoma, Animal | 1 | CTD_human |