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Editing gene: VHL (CAeditome ID:7428)

Gene summary for VHL

Gene summary

Gene information	Gene symbol	VHL
	Gene ID	7428
	Gene name	von Hippel-Lindau tumor suppressor
	Synonyms	HRCA1\|RCA1\|VHL1\|pVHL
	Cytomap	3p25.3
	Type of gene	protein-coding
	Description	von Hippel-Lindau disease tumor suppressorelongin binding proteinprotein G7von Hippel-Lindau tumor suppressor, E3 ubiquitin protein ligase
	Modification date	20210531
	UniProtAcc	P40337
	Context	- 34080067(High nuclear expression of HIF1alpha, synergizing with inactivation of LIMD1 and VHL, portray worst prognosis among the bladder cancer patients: association with arsenic prevalence)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
VHL	GO:1990756	von Hippel-Lindau disease tumor suppressor	24899725
VHL	GO:0016567	von Hippel-Lindau disease tumor suppressor	24899725
VHL	GO:0061428	von Hippel-Lindau disease tumor suppressor	11641274
VHL	GO:0005654	von Hippel-Lindau disease tumor suppressor	0000052

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RNA A-to-I events for VHL

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000134086.7

RNA A-to-I editing events in Cancer.

CAediting_256459(10142389, +), CAediting_256460(10142475, +), CAediting_256461(10142606, +), CAediting_256462(10142618, +), CAediting_256463(10142624, +), CAediting_256464(10143210, +), CAediting_256465(10143211, +), CAediting_256466(10143230, +), CAediting_256467(10143231, +), CAediting_256468(10143296, +), CAediting_256469(10143329, +), CAediting_256470(10143391, +), CAediting_256471(10143412, +), CAediting_256472(10143511, +), CAediting_256473(10143527, +), CAediting_256474(10143547, +), CAediting_256475(10143548, +), CAediting_256476(10143552, +), CAediting_256477(10143565, +), CAediting_256478(10143573, +), CAediting_256479(10143577, +), CAediting_256480(10143589, +), CAediting_256481(10143593, +), CAediting_256482(10143609, +), CAediting_256483(10143614, +), CAediting_256484(10143629, +), CAediting_256485(10143634, +), CAediting_256486(10143646, +), CAediting_256487(10143649, +), CAediting_256488(10143658, +), CAediting_256489(10143707, +), CAediting_256490(10143709, +), CAediting_256491(10144217, +), CAediting_256492(10144228, +), CAediting_256493(10144238, +), CAediting_256494(10144257, +), CAediting_256495(10144268, +), CAediting_256496(10144285, +), CAediting_256497(10144336, +), CAediting_256498(10144355, +), CAediting_256499(10144361, +), CAediting_256500(10144365, +), CAediting_256501(10144373, +), CAediting_256502(10144386, +), CAediting_256503(10144391, +), CAediting_256504(10144421, +), CAediting_256505(10144474, +), CAediting_256506(10144561, +), CAediting_256507(10144572, +), CAediting_256508(10144607, +), CAediting_256509(10144611, +), CAediting_256510(10144628, +), CAediting_256511(10145032, +), CAediting_256512(10145083, +), CAediting_256513(10145090, +), CAediting_256514(10145096, +), CAediting_256515(10145115, +), CAediting_256516(10145139, +), CAediting_256517(10145143, +), CAediting_256518(10145144, +), CAediting_256519(10145149, +), CAediting_256520(10145151, +), CAediting_256521(10145157, +), CAediting_256522(10145173, +), CAediting_256523(10145178, +), CAediting_256524(10145181, +), CAediting_256525(10145450, +), CAediting_256526(10145451, +), CAediting_256527(10145488, +), CAediting_256528(10145508, +), CAediting_256529(10145517, +), CAediting_256530(10145527, +), CAediting_256531(10145528, +), CAediting_256532(10145551, +), CAediting_256533(10145552, +), CAediting_256534(10145554, +), CAediting_256535(10145556, +), CAediting_256536(10145559, +), CAediting_256537(10145579, +), CAediting_256538(10145591, +), CAediting_256539(10145595, +), CAediting_256540(10145615, +), CAediting_256541(10145625, +), CAediting_256542(10145626, +), CAediting_256543(10145656, +), CAediting_256544(10146278, +), CAediting_256545(10146303, +), CAediting_256546(10146313, +), CAediting_256547(10146315, +), CAediting_256548(10146413, +), CAediting_256549(10146436, +), CAediting_256550(10147836, +), CAediting_256551(10147837, +), CAediting_256552(10147849, +), CAediting_256553(10147882, +), CAediting_256554(10147906, +), CAediting_256555(10147909, +), CAediting_256556(10147910, +), CAediting_256557(10147949, +), CAediting_256558(10147957, +), CAediting_256559(10147962, +), CAediting_256560(10147992, +), CAediting_256561(10147998, +), CAediting_256562(10148016, +), CAediting_256563(10148021, +), CAediting_256564(10148037, +), CAediting_256565(10148041, +), CAediting_256566(10148045, +), CAediting_256567(10148051, +), CAediting_256568(10148053, +), CAediting_256569(10148061, +), CAediting_256570(10148071, +), CAediting_256571(10148080, +), CAediting_256572(10148084, +), CAediting_256573(10148104, +), CAediting_256574(10148588, +), CAediting_256575(10148760, +), CAediting_256576(10148761, +), CAediting_256577(10148873, +), CAediting_256578(10149136, +), CAediting_256579(10149212, +), CAediting_256580(10149213, +), CAediting_256581(10149314, +), CAediting_256582(10149342, +), CAediting_256583(10150912, +), CAediting_256584(10150914, +), CAediting_256585(10150918, +), CAediting_256586(10150924, +), CAediting_256587(10150933, +), CAediting_256588(10150937, +), CAediting_256589(10150944, +), CAediting_256590(10150949, +), CAediting_256591(10150958, +), CAediting_256592(10150968, +), CAediting_256593(10150973, +), CAediting_256594(10150974, +), CAediting_256595(10150993, +), CAediting_256596(10150997, +), CAediting_256597(10150998, +), CAediting_256598(10151010, +), CAediting_256599(10151017, +), CAediting_256600(10151022, +), CAediting_256601(10151033, +), CAediting_256602(10151036, +), CAediting_256603(10151045, +), CAediting_256604(10151046, +), CAediting_256605(10151054, +), CAediting_256606(10151060, +), CAediting_256607(10151063, +), CAediting_256608(10151067, +), CAediting_256609(10151069, +), CAediting_256610(10151089, +), CAediting_256611(10151100, +), CAediting_256612(10151101, +), CAediting_256613(10151102, +), CAediting_256614(10151114, +), CAediting_256615(10151119, +), CAediting_256616(10151127, +), CAediting_256617(10151132, +), CAediting_256618(10151140, +), CAediting_256619(10151142, +), CAediting_256620(10151154, +), CAediting_256621(10151156, +), CAediting_256622(10151169, +), CAediting_256623(10151242, +), CAediting_256624(10151674, +), CAediting_256625(10151809, +), CAediting_256626(10151818, +), CAediting_256627(10151827, +), CAediting_256628(10151831, +), CAediting_256629(10151837, +), CAediting_256630(10151850, +), CAediting_256631(10151863, +), CAediting_256632(10151864, +), CAediting_256633(10151882, +), CAediting_256634(10151889, +), CAediting_256635(10151932, +), CAediting_256636(10151940, +), CAediting_256637(10151941, +), CAediting_256638(10151946, +), CAediting_256639(10151957, +), CAediting_256640(10151963, +), CAediting_256641(10151968, +), CAediting_256642(10151971, +), CAediting_256643(10151981, +), CAediting_256644(10151986, +), CAediting_256645(10152002, +), CAediting_256646(10152006, +), CAediting_256647(10152021, +), CAediting_256648(10152031, +), CAediting_256649(10152043, +), CAediting_256650(10152045, +), CAediting_256651(10152048, +), CAediting_256652(10152049, +), CAediting_256653(10152062, +), CAediting_256654(10152063, +), CAediting_256655(10152064, +), CAediting_256656(10152065, +), CAediting_256657(10152066, +), CAediting_256658(10152071, +), CAediting_256659(10152074, +), CAediting_256660(10152076, +), CAediting_256661(10152094, +), CAediting_256662(10152104, +), CAediting_256663(10152112, +), CAediting_256664(10152113, +), CAediting_256665(10152118, +), CAediting_256666(10152121, +), CAediting_256667(10152143, +), CAediting_256668(10152148, +), CAediting_256669(10152153, +), CAediting_256670(10152158, +), CAediting_256671(10152161, +), CAediting_256672(10152167, +), CAediting_256673(10152169, +), CAediting_256674(10152172, +), CAediting_256675(10152181, +), CAediting_256676(10152182, +), CAediting_256677(10152184, +), CAediting_256678(10152190, +), CAediting_256679(10152191, +), CAediting_256680(10152192, +), CAediting_256681(10152197, +), CAediting_256682(10152203, +), CAediting_256683(10152206, +), CAediting_256684(10152207, +), CAediting_256685(10152208, +), CAediting_256686(10152209, +), CAediting_256687(10152210, +), CAediting_256688(10152213, +), CAediting_256689(10152215, +), CAediting_256690(10152216, +), CAediting_256691(10152219, +),

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RNA editing positional annotations for VHL using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_256459	chr3_10142389_+	intronic
CAediting_256460	chr3_10142475_+	intronic
CAediting_256461	chr3_10142606_+	ncRNA_exonic
CAediting_256462	chr3_10142618_+	ncRNA_exonic
CAediting_256463	chr3_10142624_+	ncRNA_exonic
CAediting_256464	chr3_10143210_+	ncRNA_intronic
CAediting_256465	chr3_10143211_+	ncRNA_intronic
CAediting_256466	chr3_10143230_+	ncRNA_intronic
CAediting_256467	chr3_10143231_+	ncRNA_intronic
CAediting_256468	chr3_10143296_+	ncRNA_intronic
CAediting_256469	chr3_10143329_+	ncRNA_intronic
CAediting_256470	chr3_10143391_+	ncRNA_intronic
CAediting_256471	chr3_10143412_+	ncRNA_intronic
CAediting_256472	chr3_10143511_+	ncRNA_intronic
CAediting_256473	chr3_10143527_+	ncRNA_intronic
CAediting_256474	chr3_10143547_+	ncRNA_intronic
CAediting_256475	chr3_10143548_+	ncRNA_intronic
CAediting_256476	chr3_10143552_+	ncRNA_intronic
CAediting_256477	chr3_10143565_+	ncRNA_intronic
CAediting_256478	chr3_10143573_+	ncRNA_intronic
CAediting_256479	chr3_10143577_+	ncRNA_intronic
CAediting_256480	chr3_10143589_+	ncRNA_intronic
CAediting_256481	chr3_10143593_+	ncRNA_intronic
CAediting_256482	chr3_10143609_+	ncRNA_intronic
CAediting_256483	chr3_10143614_+	ncRNA_intronic
CAediting_256484	chr3_10143629_+	ncRNA_intronic
CAediting_256485	chr3_10143634_+	ncRNA_intronic
CAediting_256486	chr3_10143646_+	ncRNA_intronic
CAediting_256487	chr3_10143649_+	ncRNA_intronic
CAediting_256488	chr3_10143658_+	ncRNA_intronic
CAediting_256489	chr3_10143707_+	ncRNA_intronic
CAediting_256490	chr3_10143709_+	ncRNA_intronic
CAediting_256491	chr3_10144217_+	ncRNA_intronic
CAediting_256492	chr3_10144228_+	ncRNA_intronic
CAediting_256493	chr3_10144238_+	ncRNA_intronic
CAediting_256494	chr3_10144257_+	ncRNA_intronic
CAediting_256495	chr3_10144268_+	ncRNA_intronic
CAediting_256496	chr3_10144285_+	ncRNA_intronic
CAediting_256497	chr3_10144336_+	ncRNA_intronic
CAediting_256498	chr3_10144355_+	ncRNA_intronic
CAediting_256499	chr3_10144361_+	ncRNA_intronic
CAediting_256500	chr3_10144365_+	ncRNA_intronic
CAediting_256501	chr3_10144373_+	ncRNA_intronic
CAediting_256502	chr3_10144386_+	ncRNA_intronic
CAediting_256503	chr3_10144391_+	ncRNA_intronic
CAediting_256504	chr3_10144421_+	ncRNA_intronic
CAediting_256505	chr3_10144474_+	ncRNA_intronic
CAediting_256506	chr3_10144561_+	ncRNA_intronic
CAediting_256507	chr3_10144572_+	ncRNA_intronic
CAediting_256508	chr3_10144607_+	ncRNA_intronic
CAediting_256509	chr3_10144611_+	ncRNA_intronic
CAediting_256510	chr3_10144628_+	ncRNA_intronic
CAediting_256511	chr3_10145032_+	ncRNA_intronic
CAediting_256512	chr3_10145083_+	ncRNA_intronic
CAediting_256513	chr3_10145090_+	ncRNA_intronic
CAediting_256514	chr3_10145096_+	ncRNA_intronic
CAediting_256515	chr3_10145115_+	ncRNA_intronic
CAediting_256516	chr3_10145139_+	ncRNA_intronic
CAediting_256517	chr3_10145143_+	ncRNA_intronic
CAediting_256518	chr3_10145144_+	ncRNA_intronic
CAediting_256519	chr3_10145149_+	ncRNA_intronic
CAediting_256520	chr3_10145151_+	ncRNA_intronic
CAediting_256521	chr3_10145157_+	ncRNA_intronic
CAediting_256522	chr3_10145173_+	ncRNA_intronic
CAediting_256523	chr3_10145178_+	ncRNA_intronic
CAediting_256524	chr3_10145181_+	ncRNA_intronic
CAediting_256525	chr3_10145450_+	ncRNA_intronic
CAediting_256526	chr3_10145451_+	ncRNA_intronic
CAediting_256527	chr3_10145488_+	ncRNA_intronic
CAediting_256528	chr3_10145508_+	ncRNA_intronic
CAediting_256529	chr3_10145517_+	ncRNA_intronic
CAediting_256530	chr3_10145527_+	ncRNA_intronic
CAediting_256531	chr3_10145528_+	ncRNA_intronic
CAediting_256532	chr3_10145551_+	ncRNA_intronic
CAediting_256533	chr3_10145552_+	ncRNA_intronic
CAediting_256534	chr3_10145554_+	ncRNA_intronic
CAediting_256535	chr3_10145556_+	ncRNA_intronic
CAediting_256536	chr3_10145559_+	ncRNA_intronic
CAediting_256537	chr3_10145579_+	ncRNA_intronic
CAediting_256538	chr3_10145591_+	ncRNA_intronic
CAediting_256539	chr3_10145595_+	ncRNA_intronic
CAediting_256540	chr3_10145615_+	ncRNA_intronic
CAediting_256541	chr3_10145625_+	ncRNA_intronic
CAediting_256542	chr3_10145626_+	ncRNA_intronic
CAediting_256543	chr3_10145656_+	ncRNA_intronic
CAediting_256544	chr3_10146278_+	ncRNA_intronic
CAediting_256545	chr3_10146303_+	ncRNA_intronic
CAediting_256546	chr3_10146313_+	ncRNA_intronic
CAediting_256547	chr3_10146315_+	ncRNA_intronic
CAediting_256548	chr3_10146413_+	ncRNA_intronic
CAediting_256549	chr3_10146436_+	ncRNA_intronic
CAediting_256550	chr3_10147836_+	ncRNA_intronic
CAediting_256551	chr3_10147837_+	ncRNA_intronic
CAediting_256552	chr3_10147849_+	ncRNA_intronic
CAediting_256553	chr3_10147882_+	ncRNA_intronic
CAediting_256554	chr3_10147906_+	ncRNA_intronic
CAediting_256555	chr3_10147909_+	ncRNA_intronic
CAediting_256556	chr3_10147910_+	ncRNA_intronic
CAediting_256557	chr3_10147949_+	ncRNA_intronic
CAediting_256558	chr3_10147957_+	ncRNA_intronic
CAediting_256559	chr3_10147962_+	ncRNA_intronic
CAediting_256560	chr3_10147992_+	ncRNA_intronic
CAediting_256561	chr3_10147998_+	ncRNA_intronic
CAediting_256562	chr3_10148016_+	ncRNA_intronic
CAediting_256563	chr3_10148021_+	ncRNA_intronic
CAediting_256564	chr3_10148037_+	ncRNA_intronic
CAediting_256565	chr3_10148041_+	ncRNA_intronic
CAediting_256566	chr3_10148045_+	ncRNA_intronic
CAediting_256567	chr3_10148051_+	ncRNA_intronic
CAediting_256568	chr3_10148053_+	ncRNA_intronic
CAediting_256569	chr3_10148061_+	ncRNA_intronic
CAediting_256570	chr3_10148071_+	ncRNA_intronic
CAediting_256571	chr3_10148080_+	ncRNA_intronic
CAediting_256572	chr3_10148084_+	ncRNA_intronic
CAediting_256573	chr3_10148104_+	ncRNA_intronic
CAediting_256574	chr3_10148588_+	ncRNA_intronic
CAediting_256575	chr3_10148760_+	ncRNA_intronic
CAediting_256576	chr3_10148761_+	ncRNA_intronic
CAediting_256577	chr3_10148873_+	ncRNA_intronic
CAediting_256578	chr3_10149136_+	ncRNA_intronic
CAediting_256579	chr3_10149212_+	ncRNA_intronic
CAediting_256580	chr3_10149213_+	ncRNA_intronic
CAediting_256581	chr3_10149314_+	ncRNA_intronic
CAediting_256582	chr3_10149342_+	ncRNA_intronic
CAediting_256583	chr3_10150912_+	UTR3
CAediting_256584	chr3_10150914_+	UTR3
CAediting_256585	chr3_10150918_+	UTR3
CAediting_256586	chr3_10150924_+	UTR3
CAediting_256587	chr3_10150933_+	UTR3
CAediting_256588	chr3_10150937_+	UTR3
CAediting_256589	chr3_10150944_+	UTR3
CAediting_256590	chr3_10150949_+	UTR3
CAediting_256591	chr3_10150958_+	UTR3
CAediting_256592	chr3_10150968_+	UTR3
CAediting_256593	chr3_10150973_+	UTR3
CAediting_256594	chr3_10150974_+	UTR3
CAediting_256595	chr3_10150993_+	UTR3
CAediting_256596	chr3_10150997_+	UTR3
CAediting_256597	chr3_10150998_+	UTR3
CAediting_256598	chr3_10151010_+	UTR3
CAediting_256599	chr3_10151017_+	UTR3
CAediting_256600	chr3_10151022_+	UTR3
CAediting_256601	chr3_10151033_+	UTR3
CAediting_256602	chr3_10151036_+	UTR3
CAediting_256603	chr3_10151045_+	UTR3
CAediting_256604	chr3_10151046_+	UTR3
CAediting_256605	chr3_10151054_+	UTR3
CAediting_256606	chr3_10151060_+	UTR3
CAediting_256607	chr3_10151063_+	UTR3
CAediting_256608	chr3_10151067_+	UTR3
CAediting_256609	chr3_10151069_+	UTR3
CAediting_256610	chr3_10151089_+	UTR3
CAediting_256611	chr3_10151100_+	UTR3
CAediting_256612	chr3_10151101_+	UTR3
CAediting_256613	chr3_10151102_+	UTR3
CAediting_256614	chr3_10151114_+	UTR3
CAediting_256615	chr3_10151119_+	UTR3
CAediting_256616	chr3_10151127_+	UTR3
CAediting_256617	chr3_10151132_+	UTR3
CAediting_256618	chr3_10151140_+	UTR3
CAediting_256619	chr3_10151142_+	UTR3
CAediting_256620	chr3_10151154_+	UTR3
CAediting_256621	chr3_10151156_+	UTR3
CAediting_256622	chr3_10151169_+	UTR3
CAediting_256623	chr3_10151242_+	UTR3
CAediting_256624	chr3_10151674_+	UTR3
CAediting_256625	chr3_10151809_+	UTR3
CAediting_256626	chr3_10151818_+	UTR3
CAediting_256627	chr3_10151827_+	UTR3
CAediting_256628	chr3_10151831_+	UTR3
CAediting_256629	chr3_10151837_+	UTR3
CAediting_256630	chr3_10151850_+	UTR3
CAediting_256631	chr3_10151863_+	UTR3
CAediting_256632	chr3_10151864_+	UTR3
CAediting_256633	chr3_10151882_+	UTR3
CAediting_256634	chr3_10151889_+	UTR3
CAediting_256635	chr3_10151932_+	UTR3
CAediting_256636	chr3_10151940_+	UTR3
CAediting_256637	chr3_10151941_+	UTR3
CAediting_256638	chr3_10151946_+	UTR3
CAediting_256639	chr3_10151957_+	UTR3
CAediting_256640	chr3_10151963_+	UTR3
CAediting_256641	chr3_10151968_+	UTR3
CAediting_256642	chr3_10151971_+	UTR3
CAediting_256643	chr3_10151981_+	UTR3
CAediting_256644	chr3_10151986_+	UTR3
CAediting_256645	chr3_10152002_+	UTR3
CAediting_256646	chr3_10152006_+	UTR3
CAediting_256647	chr3_10152021_+	UTR3
CAediting_256648	chr3_10152031_+	UTR3
CAediting_256649	chr3_10152043_+	UTR3
CAediting_256650	chr3_10152045_+	UTR3
CAediting_256651	chr3_10152048_+	UTR3
CAediting_256652	chr3_10152049_+	UTR3
CAediting_256653	chr3_10152062_+	UTR3
CAediting_256654	chr3_10152063_+	UTR3
CAediting_256655	chr3_10152064_+	UTR3
CAediting_256656	chr3_10152065_+	UTR3
CAediting_256657	chr3_10152066_+	UTR3
CAediting_256658	chr3_10152071_+	UTR3
CAediting_256659	chr3_10152074_+	UTR3
CAediting_256660	chr3_10152076_+	UTR3
CAediting_256661	chr3_10152094_+	UTR3
CAediting_256662	chr3_10152104_+	UTR3
CAediting_256663	chr3_10152112_+	UTR3
CAediting_256664	chr3_10152113_+	UTR3
CAediting_256665	chr3_10152118_+	UTR3
CAediting_256666	chr3_10152121_+	UTR3
CAediting_256667	chr3_10152143_+	UTR3
CAediting_256668	chr3_10152148_+	UTR3
CAediting_256669	chr3_10152153_+	UTR3
CAediting_256670	chr3_10152158_+	UTR3
CAediting_256671	chr3_10152161_+	UTR3
CAediting_256672	chr3_10152167_+	UTR3
CAediting_256673	chr3_10152169_+	UTR3
CAediting_256674	chr3_10152172_+	UTR3
CAediting_256675	chr3_10152181_+	UTR3
CAediting_256676	chr3_10152182_+	UTR3
CAediting_256677	chr3_10152184_+	UTR3
CAediting_256678	chr3_10152190_+	UTR3
CAediting_256679	chr3_10152191_+	UTR3
CAediting_256680	chr3_10152192_+	UTR3
CAediting_256681	chr3_10152197_+	UTR3
CAediting_256682	chr3_10152203_+	UTR3
CAediting_256683	chr3_10152206_+	UTR3
CAediting_256684	chr3_10152207_+	UTR3
CAediting_256685	chr3_10152208_+	UTR3
CAediting_256686	chr3_10152209_+	UTR3
CAediting_256687	chr3_10152210_+	UTR3
CAediting_256688	chr3_10152213_+	UTR3
CAediting_256689	chr3_10152215_+	UTR3
CAediting_256690	chr3_10152216_+	UTR3
CAediting_256691	chr3_10152219_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_256459	chr3_10142389_+	SINE	Alu	AluSg
CAediting_256460	chr3_10142475_+	SINE	Alu	AluSg
CAediting_256461	chr3_10142606_+	SINE	Alu	AluSg
CAediting_256462	chr3_10142618_+	SINE	Alu	AluSg
CAediting_256463	chr3_10142624_+	SINE	Alu	AluSg
CAediting_256464	chr3_10143210_+	SINE	Alu	AluSx
CAediting_256465	chr3_10143211_+	SINE	Alu	AluSx
CAediting_256466	chr3_10143230_+	SINE	Alu	AluSx
CAediting_256467	chr3_10143231_+	SINE	Alu	AluSx
CAediting_256468	chr3_10143296_+	SINE	Alu	AluSx
CAediting_256469	chr3_10143329_+	SINE	Alu	AluSx
CAediting_256470	chr3_10143391_+	SINE	Alu	AluSx
CAediting_256471	chr3_10143412_+	SINE	Alu	AluSx
CAediting_256472	chr3_10143511_+	SINE	Alu	AluSc5
CAediting_256473	chr3_10143527_+	SINE	Alu	AluSc5
CAediting_256474	chr3_10143547_+	SINE	Alu	AluSc5
CAediting_256475	chr3_10143548_+	SINE	Alu	AluSc5
CAediting_256476	chr3_10143552_+	SINE	Alu	AluSc5
CAediting_256477	chr3_10143565_+	SINE	Alu	AluSc5
CAediting_256478	chr3_10143573_+	SINE	Alu	AluSc5
CAediting_256479	chr3_10143577_+	SINE	Alu	AluSc5
CAediting_256480	chr3_10143589_+	SINE	Alu	AluSc5
CAediting_256481	chr3_10143593_+	SINE	Alu	AluSc5
CAediting_256482	chr3_10143609_+	SINE	Alu	AluSc5
CAediting_256483	chr3_10143614_+	SINE	Alu	AluSc5
CAediting_256484	chr3_10143629_+	SINE	Alu	AluSc5
CAediting_256485	chr3_10143634_+	SINE	Alu	AluSc5
CAediting_256486	chr3_10143646_+	SINE	Alu	AluSc5
CAediting_256487	chr3_10143649_+	SINE	Alu	AluSc5
CAediting_256488	chr3_10143658_+	SINE	Alu	AluSc5
CAediting_256489	chr3_10143707_+	SINE	Alu	AluSc5
CAediting_256490	chr3_10143709_+	SINE	Alu	AluSc5
CAediting_256491	chr3_10144217_+	SINE	Alu	AluJo
CAediting_256492	chr3_10144228_+	SINE	Alu	AluJo
CAediting_256493	chr3_10144238_+	SINE	Alu	AluJo
CAediting_256494	chr3_10144257_+	SINE	Alu	AluJo
CAediting_256495	chr3_10144268_+	SINE	Alu	AluJo
CAediting_256496	chr3_10144285_+	SINE	Alu	AluJo
CAediting_256497	chr3_10144336_+	SINE	Alu	AluJo
CAediting_256498	chr3_10144355_+	SINE	Alu	AluJo
CAediting_256499	chr3_10144361_+	SINE	Alu	AluJo
CAediting_256500	chr3_10144365_+	SINE	Alu	AluJo
CAediting_256501	chr3_10144373_+	SINE	Alu	AluJo
CAediting_256502	chr3_10144386_+	SINE	Alu	AluJo
CAediting_256503	chr3_10144391_+	SINE	Alu	AluJo
CAediting_256504	chr3_10144421_+	SINE	Alu	AluJo
CAediting_256505	chr3_10144474_+	SINE	Alu	AluJo
CAediting_256506	chr3_10144561_+	SINE	Alu	AluJr
CAediting_256507	chr3_10144572_+	SINE	Alu	AluJr
CAediting_256508	chr3_10144607_+	SINE	Alu	AluJr
CAediting_256509	chr3_10144611_+	SINE	Alu	AluJr
CAediting_256510	chr3_10144628_+	SINE	Alu	AluJr
CAediting_256511	chr3_10145032_+	SINE	Alu	AluSx
CAediting_256512	chr3_10145083_+	SINE	Alu	AluSx
CAediting_256513	chr3_10145090_+	SINE	Alu	AluSx
CAediting_256514	chr3_10145096_+	SINE	Alu	AluSx
CAediting_256515	chr3_10145115_+	SINE	Alu	AluSx
CAediting_256516	chr3_10145139_+	SINE	Alu	AluSx
CAediting_256517	chr3_10145143_+	SINE	Alu	AluSx
CAediting_256518	chr3_10145144_+	SINE	Alu	AluSx
CAediting_256519	chr3_10145149_+	SINE	Alu	AluSx
CAediting_256520	chr3_10145151_+	SINE	Alu	AluSx
CAediting_256521	chr3_10145157_+	SINE	Alu	AluSx
CAediting_256522	chr3_10145173_+	SINE	Alu	AluSx
CAediting_256523	chr3_10145178_+	SINE	Alu	AluSx
CAediting_256524	chr3_10145181_+	SINE	Alu	AluSx
CAediting_256525	chr3_10145450_+	SINE	Alu	AluY
CAediting_256526	chr3_10145451_+	SINE	Alu	AluY
CAediting_256527	chr3_10145488_+	SINE	Alu	AluY
CAediting_256528	chr3_10145508_+	SINE	Alu	AluY
CAediting_256529	chr3_10145517_+	SINE	Alu	AluY
CAediting_256530	chr3_10145527_+	SINE	Alu	AluY
CAediting_256531	chr3_10145528_+	SINE	Alu	AluY
CAediting_256532	chr3_10145551_+	SINE	Alu	AluY
CAediting_256533	chr3_10145552_+	SINE	Alu	AluY
CAediting_256534	chr3_10145554_+	SINE	Alu	AluY
CAediting_256535	chr3_10145556_+	SINE	Alu	AluY
CAediting_256536	chr3_10145559_+	SINE	Alu	AluY
CAediting_256537	chr3_10145579_+	SINE	Alu	AluY
CAediting_256538	chr3_10145591_+	SINE	Alu	AluY
CAediting_256539	chr3_10145595_+	SINE	Alu	AluY
CAediting_256540	chr3_10145615_+	SINE	Alu	AluY
CAediting_256541	chr3_10145625_+	SINE	Alu	AluY
CAediting_256542	chr3_10145626_+	SINE	Alu	AluY
CAediting_256543	chr3_10145656_+	SINE	Alu	AluY
CAediting_256544	chr3_10146278_+	SINE	Alu	AluY
CAediting_256545	chr3_10146303_+	SINE	Alu	AluY
CAediting_256546	chr3_10146313_+	SINE	Alu	AluY
CAediting_256547	chr3_10146315_+	SINE	Alu	AluY
CAediting_256548	chr3_10146413_+	SINE	Alu	AluY
CAediting_256549	chr3_10146436_+	SINE	Alu	AluY
CAediting_256550	chr3_10147836_+	SINE	Alu	AluJr
CAediting_256551	chr3_10147837_+	SINE	Alu	AluJr
CAediting_256552	chr3_10147849_+	SINE	Alu	AluJr
CAediting_256553	chr3_10147882_+	SINE	Alu	AluJr
CAediting_256554	chr3_10147906_+	SINE	Alu	AluJr
CAediting_256555	chr3_10147909_+	SINE	Alu	AluJr
CAediting_256556	chr3_10147910_+	SINE	Alu	AluJr
CAediting_256557	chr3_10147949_+	SINE	Alu	AluJr
CAediting_256558	chr3_10147957_+	SINE	Alu	AluJr
CAediting_256559	chr3_10147962_+	SINE	Alu	AluJr
CAediting_256560	chr3_10147992_+	SINE	Alu	AluJr
CAediting_256561	chr3_10147998_+	SINE	Alu	AluJr
CAediting_256562	chr3_10148016_+	SINE	Alu	AluJr
CAediting_256563	chr3_10148021_+	SINE	Alu	AluJr
CAediting_256564	chr3_10148037_+	SINE	Alu	AluJr
CAediting_256565	chr3_10148041_+	SINE	Alu	AluJr
CAediting_256566	chr3_10148045_+	SINE	Alu	AluJr
CAediting_256567	chr3_10148051_+	SINE	Alu	AluJr
CAediting_256568	chr3_10148053_+	SINE	Alu	AluJr
CAediting_256569	chr3_10148061_+	SINE	Alu	AluJr
CAediting_256570	chr3_10148071_+	SINE	Alu	AluJr
CAediting_256571	chr3_10148080_+	SINE	Alu	AluJr
CAediting_256572	chr3_10148084_+	SINE	Alu	AluJr
CAediting_256573	chr3_10148104_+	SINE	Alu	AluJr
CAediting_256574	chr3_10148588_+	SINE	Alu	AluYa5
CAediting_256575	chr3_10148760_+	SINE	Alu	AluSx3
CAediting_256576	chr3_10148761_+	SINE	Alu	AluSx3
CAediting_256577	chr3_10148873_+	SINE	Alu	AluSx3
CAediting_256578	chr3_10149136_+	SINE	Alu	AluJo
CAediting_256579	chr3_10149212_+	SINE	Alu	AluJo
CAediting_256580	chr3_10149213_+	SINE	Alu	AluJo
CAediting_256581	chr3_10149314_+	SINE	Alu	AluJo
CAediting_256582	chr3_10149342_+	SINE	Alu	AluJo
CAediting_256583	chr3_10150912_+	SINE	Alu	AluSx1
CAediting_256584	chr3_10150914_+	SINE	Alu	AluSx1
CAediting_256585	chr3_10150918_+	SINE	Alu	AluSx1
CAediting_256586	chr3_10150924_+	SINE	Alu	AluSx1
CAediting_256587	chr3_10150933_+	SINE	Alu	AluSx1
CAediting_256588	chr3_10150937_+	SINE	Alu	AluSx1
CAediting_256589	chr3_10150944_+	SINE	Alu	AluSx1
CAediting_256590	chr3_10150949_+	SINE	Alu	AluSx1
CAediting_256591	chr3_10150958_+	SINE	Alu	AluSx1
CAediting_256592	chr3_10150968_+	SINE	Alu	AluSx1
CAediting_256593	chr3_10150973_+	SINE	Alu	AluSx1
CAediting_256594	chr3_10150974_+	SINE	Alu	AluSx1
CAediting_256595	chr3_10150993_+	SINE	Alu	AluSx1
CAediting_256596	chr3_10150997_+	SINE	Alu	AluSx1
CAediting_256597	chr3_10150998_+	SINE	Alu	AluSx1
CAediting_256598	chr3_10151010_+	SINE	Alu	AluSx1
CAediting_256599	chr3_10151017_+	SINE	Alu	AluSx1
CAediting_256600	chr3_10151022_+	SINE	Alu	AluSx1
CAediting_256601	chr3_10151033_+	SINE	Alu	AluSx1
CAediting_256602	chr3_10151036_+	SINE	Alu	AluSx1
CAediting_256603	chr3_10151045_+	SINE	Alu	AluSx1
CAediting_256604	chr3_10151046_+	SINE	Alu	AluSx1
CAediting_256605	chr3_10151054_+	SINE	Alu	AluSx1
CAediting_256606	chr3_10151060_+	SINE	Alu	AluSx1
CAediting_256607	chr3_10151063_+	SINE	Alu	AluSx1
CAediting_256608	chr3_10151067_+	SINE	Alu	AluSx1
CAediting_256609	chr3_10151069_+	SINE	Alu	AluSx1
CAediting_256610	chr3_10151089_+	SINE	Alu	AluSx1
CAediting_256611	chr3_10151100_+	SINE	Alu	AluSx1
CAediting_256612	chr3_10151101_+	SINE	Alu	AluSx1
CAediting_256613	chr3_10151102_+	SINE	Alu	AluSx1
CAediting_256614	chr3_10151114_+	SINE	Alu	AluSx1
CAediting_256615	chr3_10151119_+	SINE	Alu	AluSx1
CAediting_256616	chr3_10151127_+	SINE	Alu	AluSx1
CAediting_256617	chr3_10151132_+	SINE	Alu	AluSx1
CAediting_256618	chr3_10151140_+	SINE	Alu	AluSx1
CAediting_256619	chr3_10151142_+	SINE	Alu	AluSx1
CAediting_256620	chr3_10151154_+	SINE	Alu	AluSx1
CAediting_256621	chr3_10151156_+	SINE	Alu	AluSx1
CAediting_256622	chr3_10151169_+	SINE	Alu	AluSx1
CAediting_256624	chr3_10151674_+	LINE	L1	L1ME4a
CAediting_256625	chr3_10151809_+	SINE	Alu	AluJr
CAediting_256626	chr3_10151818_+	SINE	Alu	AluJr
CAediting_256627	chr3_10151827_+	SINE	Alu	AluJr
CAediting_256628	chr3_10151831_+	SINE	Alu	AluJr
CAediting_256629	chr3_10151837_+	SINE	Alu	AluJr
CAediting_256630	chr3_10151850_+	SINE	Alu	AluJr
CAediting_256631	chr3_10151863_+	SINE	Alu	AluJr
CAediting_256632	chr3_10151864_+	SINE	Alu	AluJr
CAediting_256633	chr3_10151882_+	SINE	Alu	AluJr
CAediting_256634	chr3_10151889_+	SINE	Alu	AluJr
CAediting_256635	chr3_10151932_+	SINE	Alu	AluJr
CAediting_256636	chr3_10151940_+	SINE	Alu	AluJr
CAediting_256637	chr3_10151941_+	SINE	Alu	AluJr
CAediting_256638	chr3_10151946_+	SINE	Alu	AluJr
CAediting_256639	chr3_10151957_+	SINE	Alu	AluJr
CAediting_256640	chr3_10151963_+	SINE	Alu	AluJr
CAediting_256641	chr3_10151968_+	SINE	Alu	AluJr
CAediting_256642	chr3_10151971_+	SINE	Alu	AluJr
CAediting_256643	chr3_10151981_+	SINE	Alu	AluJr
CAediting_256644	chr3_10151986_+	SINE	Alu	AluJr
CAediting_256645	chr3_10152002_+	SINE	Alu	AluJr
CAediting_256646	chr3_10152006_+	SINE	Alu	AluJr
CAediting_256647	chr3_10152021_+	SINE	Alu	AluJr
CAediting_256648	chr3_10152031_+	SINE	Alu	AluJr
CAediting_256649	chr3_10152043_+	SINE	Alu	AluJr
CAediting_256650	chr3_10152045_+	SINE	Alu	AluJr
CAediting_256651	chr3_10152048_+	SINE	Alu	AluJr
CAediting_256652	chr3_10152049_+	SINE	Alu	AluJr
CAediting_256653	chr3_10152062_+	SINE	Alu	AluJr
CAediting_256654	chr3_10152063_+	SINE	Alu	AluJr
CAediting_256655	chr3_10152064_+	SINE	Alu	AluJr
CAediting_256656	chr3_10152065_+	SINE	Alu	AluJr
CAediting_256657	chr3_10152066_+	SINE	Alu	AluJr
CAediting_256658	chr3_10152071_+	SINE	Alu	AluJr
CAediting_256659	chr3_10152074_+	SINE	Alu	AluJr
CAediting_256660	chr3_10152076_+	SINE	Alu	AluJr
CAediting_256661	chr3_10152094_+	SINE	Alu	AluSx
CAediting_256662	chr3_10152104_+	SINE	Alu	AluSx
CAediting_256663	chr3_10152112_+	SINE	Alu	AluSx
CAediting_256664	chr3_10152113_+	SINE	Alu	AluSx
CAediting_256665	chr3_10152118_+	SINE	Alu	AluSx
CAediting_256666	chr3_10152121_+	SINE	Alu	AluSx
CAediting_256667	chr3_10152143_+	SINE	Alu	AluSx
CAediting_256668	chr3_10152148_+	SINE	Alu	AluSx
CAediting_256669	chr3_10152153_+	SINE	Alu	AluSx
CAediting_256670	chr3_10152158_+	SINE	Alu	AluSx
CAediting_256671	chr3_10152161_+	SINE	Alu	AluSx
CAediting_256672	chr3_10152167_+	SINE	Alu	AluSx
CAediting_256673	chr3_10152169_+	SINE	Alu	AluSx
CAediting_256674	chr3_10152172_+	SINE	Alu	AluSx
CAediting_256675	chr3_10152181_+	SINE	Alu	AluSx
CAediting_256676	chr3_10152182_+	SINE	Alu	AluSx
CAediting_256677	chr3_10152184_+	SINE	Alu	AluSx
CAediting_256678	chr3_10152190_+	SINE	Alu	AluSx
CAediting_256679	chr3_10152191_+	SINE	Alu	AluSx
CAediting_256680	chr3_10152192_+	SINE	Alu	AluSx
CAediting_256681	chr3_10152197_+	SINE	Alu	AluSx
CAediting_256682	chr3_10152203_+	SINE	Alu	AluSx
CAediting_256683	chr3_10152206_+	SINE	Alu	AluSx
CAediting_256684	chr3_10152207_+	SINE	Alu	AluSx
CAediting_256685	chr3_10152208_+	SINE	Alu	AluSx
CAediting_256686	chr3_10152209_+	SINE	Alu	AluSx
CAediting_256687	chr3_10152210_+	SINE	Alu	AluSx
CAediting_256688	chr3_10152213_+	SINE	Alu	AluSx
CAediting_256689	chr3_10152215_+	SINE	Alu	AluSx
CAediting_256690	chr3_10152216_+	SINE	Alu	AluSx
CAediting_256691	chr3_10152219_+	SINE	Alu	AluSx

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RNA A-to-I editing events in the alternative splicing sites for VHL

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
IR	CAediting_256600	chr3_10151022_+	10151021:10151029	5SS	2+0i	CAGGCGCCT	-2.36	CGGGCGCCT	-6.84
IR	CAediting_256618	chr3_10151140_+	10151137:10151159	3SS	0+17i	CCCAAAATGGTGGGATTACAGGT	-17.22	CCCGAAATGGTGGGATTACAGGT	-17.72
IR	CAediting_256619	chr3_10151142_+	10151137:10151159	3SS	0+15i	CCCAAAATGGTGGGATTACAGGT	-17.22	CCCAAGATGGTGGGATTACAGGT	-19.31
IR	CAediting_256620	chr3_10151154_+	10151137:10151159	3SS	0+3i	CCCAAAATGGTGGGATTACAGGT	-17.22	CCCAAAATGGTGGGATTGCAGGT	-29.14
IR	CAediting_256621	chr3_10151156_+	10151137:10151159	3SS	0+1i	CCCAAAATGGTGGGATTACAGGT	-17.22	CCCAAAATGGTGGGATTACGGGT	-8.47

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000134086.7.VHL.

Correlation between RNA A-to-I editing and PSI for ENSG00000134086.7.VHL.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for VHL

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

UCEC.CAediting_256607.ENSG00000134086.VHL.png
Soverview

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Protein coding region RNA A-to-I editings for VHL

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for VHL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_256583	chr3_10150912_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4733-5p	10150908	10150914	7mer-m8	10150896	10150915	141.00	-11.76
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1273c	10150927	10150933	7mer-m8	10150912	10150934	159.00	-25.64
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1285-3p	10150932	10150937	6mer	10150916	10150938	159.00	-31.87
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1285-3p	10150932	10150937	6mer	10150916	10150938	159.00	-31.87
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4486	10150931	10150937	7mer-m8	10150922	10150938	145.00	-17.99
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-17-3p	10150967	10150973	7mer-m8	10150953	10150974	150.00	-17.07
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-485-5p	10150971	10150977	7mer-m8	10150958	10150978	153.00	-20.87
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6884-5p	10150971	10150977	7mer-m8	10150955	10150978	150.00	-25.70
CAediting_256598	chr3_10151010_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4691-3p	10151007	10151013	7mer-m8	10150992	10151014	149.00	-21.29
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-10400-5p	10151029	10151035	7mer-1a	10151014	10151035	141.00	-26.59
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6770-3p	10151029	10151035	7mer-m8	10151015	10151036	150.00	-21.63
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6770-3p	10151029	10151035	7mer-m8	10151015	10151036	150.00	-21.63
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6770-3p	10151029	10151035	7mer-m8	10151015	10151036	150.00	-21.63
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6820-5p	10151027	10151033	7mer-m8	10151014	10151034	143.00	-20.00
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-193a-3p	10151040	10151046	7mer-m8	10151026	10151047	144.00	-17.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-193b-3p	10151040	10151046	7mer-m8	10151026	10151047	140.00	-14.21
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3190-5p	10151039	10151045	7mer-m8	10151027	10151046	151.00	-18.70
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548a-3p	10151043	10151049	7mer-m8	10151029	10151050	152.00	-12.43
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548a-3p	10151043	10151049	7mer-m8	10151029	10151050	152.00	-12.43
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548a-3p	10151043	10151049	7mer-m8	10151029	10151050	152.00	-12.43
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548ae-3p	10151044	10151050	7mer-m8	10151031	10151051	145.00	-12.84
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548ae-3p	10151044	10151050	7mer-m8	10151031	10151051	145.00	-12.84
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548ah-3p	10151044	10151050	7mer-m8	10151028	10151051	148.00	-14.20
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548aj-3p	10151044	10151050	7mer-m8	10151031	10151051	145.00	-10.73
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548aj-3p	10151044	10151050	7mer-m8	10151031	10151051	145.00	-10.73
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548am-3p	10151044	10151050	7mer-m8	10151028	10151051	148.00	-14.20
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548aq-3p	10151044	10151050	7mer-m8	10151030	10151051	145.00	-12.84
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548ar-3p	10151043	10151049	7mer-m8	10151028	10151050	143.00	-9.65
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548az-3p	10151043	10151049	7mer-m8	10151030	10151050	140.00	-9.02
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548bc	10151043	10151049	7mer-m8	10151030	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548e-3p	10151043	10151049	7mer-m8	10151029	10151050	140.00	-9.82
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548f-3p	10151043	10151049	7mer-m8	10151032	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548f-3p	10151043	10151049	7mer-m8	10151032	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548f-3p	10151043	10151049	7mer-m8	10151032	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548f-3p	10151043	10151049	7mer-m8	10151032	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548f-3p	10151043	10151049	7mer-m8	10151032	10151050	140.00	-8.75
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548j-3p	10151044	10151050	7mer-m8	10151031	10151051	145.00	-12.84
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548x-3p	10151044	10151050	7mer-m8	10151032	10151051	145.00	-10.73
CAediting_256604	chr3_10151046_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548x-3p	10151044	10151050	7mer-m8	10151032	10151051	145.00	-10.73
CAediting_256609	chr3_10151069_+	ENSG00000134086.7	ENST00000345392	hsa-miR-340-3p	10151063	10151069	7mer-m8	10151049	10151070	149.00	-17.34
CAediting_256609	chr3_10151069_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6827-3p	10151063	10151069	7mer-m8	10151050	10151070	153.00	-19.05
CAediting_256610	chr3_10151089_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3940-3p	10151086	10151092	7mer-m8	10151075	10151093	144.00	-24.53
CAediting_256612	chr3_10151101_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4294	10151099	10151105	7mer-m8	10151089	10151106	150.00	-18.29
CAediting_256613	chr3_10151102_+	ENSG00000134086.7	ENST00000345392	hsa-miR-28-5p	10151100	10151106	7mer-m8	10151086	10151107	143.00	-18.76
CAediting_256613	chr3_10151102_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3139	10151100	10151106	7mer-m8	10151085	10151107	157.00	-23.18
CAediting_256613	chr3_10151102_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4538	10151098	10151103	6mer	10151082	10151104	147.00	-25.11
CAediting_256613	chr3_10151102_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4635	10151096	10151101	6mer	10151082	10151102	140.00	-17.81
CAediting_256613	chr3_10151102_+	ENSG00000134086.7	ENST00000345392	hsa-miR-708-5p	10151100	10151106	7mer-m8	10151086	10151107	162.00	-23.09
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4767	10151121	10151127	7mer-m8	10151103	10151128	146.00	-23.43
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6765-5p	10151125	10151131	7mer-m8	10151108	10151132	150.00	-29.40
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6771-5p	10151134	10151141	8mer-1a	10151117	10151141	148.00	-25.74
CAediting_256623	chr3_10151242_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1207-5p	10151238	10151244	7mer-1a	10151221	10151244	144.00	-34.86
CAediting_256623	chr3_10151242_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1286	10151236	10151242	7mer-m8	10151224	10151243	153.00	-20.38
CAediting_256623	chr3_10151242_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4763-3p	10151238	10151244	7mer-1a	10151221	10151244	154.00	-32.26
CAediting_256623	chr3_10151242_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7150	10151238	10151245	8mer-1a	10151228	10151245	160.00	-25.64
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-513a-5p	10151803	10151809	7mer-m8	10151793	10151810	152.00	-20.34
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-513a-5p	10151803	10151809	7mer-m8	10151793	10151810	152.00	-20.34
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-638	10151808	10151814	7mer-1a	10151790	10151814	167.00	-42.95
CAediting_256627	chr3_10151827_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4297	10151822	10151828	7mer-m8	10151814	10151829	140.00	-12.99
CAediting_256627	chr3_10151827_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5581-5p	10151822	10151828	7mer-m8	10151809	10151829	161.00	-21.66
CAediting_256628	chr3_10151831_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4638-5p	10151826	10151832	7mer-m8	10151813	10151833	140.00	-16.89
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511a-3p	10151880	10151887	8mer-1a	10151866	10151887	152.00	-17.24
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511a-3p	10151880	10151887	8mer-1a	10151866	10151887	152.00	-17.24
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511a-3p	10151880	10151887	8mer-1a	10151866	10151887	152.00	-17.24
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511a-3p	10151880	10151887	8mer-1a	10151866	10151887	152.00	-17.24
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511b-3p	10151880	10151887	8mer-1a	10151865	10151887	144.00	-17.80
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6511b-3p	10151880	10151887	8mer-1a	10151865	10151887	144.00	-17.80
CAediting_256637	chr3_10151941_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3117-3p	10151939	10151945	7mer-m8	10151924	10151946	161.00	-19.80
CAediting_256637	chr3_10151941_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4759	10151938	10151945	8mer-1a	10151922	10151945	153.00	-18.68
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3940-3p	10150934	10150940	7mer-m8	10150920	10150941	147.00	-19.68
CAediting_256597	chr3_10150998_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4759	10150995	10151001	7mer-m8	10150982	10151002	144.00	-12.70
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548e-5p	10151052	10151059	8mer-1a	10151038	10151059	140.00	-9.09
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6835-3p	10151051	10151057	7mer-m8	10151036	10151058	140.00	-14.73
CAediting_256621	chr3_10151156_+	ENSG00000134086.7	ENST00000345392	hsa-miR-100-5p	10151152	10151158	7mer-m8	10151139	10151159	157.00	-19.74
CAediting_256621	chr3_10151156_+	ENSG00000134086.7	ENST00000345392	hsa-miR-99a-5p	10151152	10151158	7mer-m8	10151139	10151159	161.00	-20.67
CAediting_256621	chr3_10151156_+	ENSG00000134086.7	ENST00000345392	hsa-miR-99b-5p	10151152	10151158	7mer-m8	10151139	10151159	157.00	-24.83
CAediting_256622	chr3_10151169_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6075	10151162	10151168	7mer-m8	10151149	10151169	147.00	-22.64
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-330-3p	10151816	10151822	7mer-m8	10151801	10151823	164.00	-20.47
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6835-3p	10151815	10151821	7mer-m8	10151800	10151822	145.00	-10.75
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3136-3p	10151846	10151852	7mer-m8	10151832	10151853	164.00	-15.63
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6724-5p	10151848	10151854	7mer-m8	10151834	10151855	149.00	-26.35
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6724-5p	10151848	10151854	7mer-m8	10151834	10151855	149.00	-26.35
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6724-5p	10151848	10151854	7mer-m8	10151834	10151855	149.00	-26.35
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6724-5p	10151848	10151854	7mer-m8	10151834	10151855	149.00	-26.35
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6773-5p	10151848	10151854	7mer-m8	10151835	10151855	155.00	-23.12
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7155-3p	10151846	10151852	7mer-m8	10151832	10151853	148.00	-25.89
CAediting_256632	chr3_10151864_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1200	10151860	10151865	6mer	10151847	10151866	140.00	-18.02
CAediting_256632	chr3_10151864_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4793-5p	10151861	10151868	8mer-1a	10151845	10151868	147.00	-19.31
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4258	10151952	10151958	7mer-m8	10151943	10151959	140.00	-15.02
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4707-3p	10151953	10151959	7mer-m8	10151937	10151960	147.00	-24.75
CAediting_256640	chr3_10151963_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6802-3p	10151961	10151967	7mer-m8	10151947	10151968	155.00	-22.36
CAediting_256640	chr3_10151963_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6849-3p	10151956	10151962	7mer-m8	10151942	10151963	146.00	-17.81
CAediting_256641	chr3_10151968_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1224-3p	10151962	10151969	8mer-1a	10151949	10151969	149.00	-22.19
CAediting_256641	chr3_10151968_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1260a	10151963	10151970	8mer-1a	10151953	10151970	162.00	-25.77
CAediting_256641	chr3_10151968_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1260b	10151963	10151970	8mer-1a	10151952	10151970	154.00	-22.64
CAediting_256642	chr3_10151971_+	ENSG00000134086.7	ENST00000345392	hsa-miR-12125	10151964	10151970	7mer-m8	10151949	10151971	154.00	-25.74
CAediting_256642	chr3_10151971_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6881-3p	10151967	10151972	6mer	10151950	10151973	143.00	-20.17
CAediting_256642	chr3_10151971_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7111-3p	10151966	10151972	7mer-m8	10151951	10151973	155.00	-24.84
CAediting_256643	chr3_10151981_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6771-3p	10151978	10151985	8mer-1a	10151962	10151985	153.00	-16.65
CAediting_256646	chr3_10152006_+	ENSG00000134086.7	ENST00000345392	hsa-miR-324-3p	10151999	10152005	7mer-m8	10151980	10152006	145.00	-23.86
CAediting_256650	chr3_10152045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-339-5p	10152039	10152045	7mer-m8	10152024	10152046	171.00	-33.53
CAediting_256650	chr3_10152045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5699-3p	10152039	10152044	6mer	10152025	10152045	146.00	-31.64
CAediting_256650	chr3_10152045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6748-3p	10152038	10152044	7mer-m8	10152025	10152045	146.00	-22.59
CAediting_256650	chr3_10152045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-874-3p	10152041	10152048	8mer-1a	10152027	10152048	157.00	-26.85
CAediting_256653	chr3_10152062_+	ENSG00000134086.7	ENST00000345392	hsa-miR-12119	10152056	10152063	8mer-1a	10152038	10152063	147.00	-20.30
CAediting_256653	chr3_10152062_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4649-3p	10152055	10152062	8mer-1a	10152035	10152062	144.00	-28.97
CAediting_256654	chr3_10152063_+	ENSG00000134086.7	ENST00000345392	hsa-miR-526b-5p	10152057	10152064	8mer-1a	10152042	10152064	165.00	-16.10
CAediting_256608	chr3_10151067_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6890-3p	10151065	10151071	7mer-m8	10151053	10151072	153.00	-15.94
CAediting_256634	chr3_10151889_+	ENSG00000134086.7	ENST00000345392	hsa-miR-10400-3p	10151886	10151892	7mer-m8	10151871	10151893	150.00	-20.83
CAediting_256634	chr3_10151889_+	ENSG00000134086.7	ENST00000345392	hsa-miR-12125	10151882	10151888	7mer-m8	10151866	10151889	149.00	-18.49
CAediting_256634	chr3_10151889_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4674	10151886	10151892	7mer-m8	10151873	10151893	140.00	-17.10
CAediting_256648	chr3_10152031_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4743-5p	10152027	10152033	7mer-m8	10152015	10152034	147.00	-26.34

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-10399-5p	10151804	10151810	7mer-m8	10151791	10151811	140	-9.22
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-10400-3p	10151848	10151854	7mer-m8	10151834	10151855	141	-21.24
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1184	10151996	10152002	7mer-m8	10151982	10152003	146	-15.08
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1184	10151996	10152002	7mer-m8	10151982	10152003	146	-15.08
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1184	10151996	10152002	7mer-m8	10151982	10152003	146	-15.08
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1228-5p	10151120	10151126	7mer-m8	10151108	10151127	145	-24.49
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1262	10150930	10150936	7mer-m8	10150914	10150937	143	-14.86
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1262	10150930	10150936	7mer-m8	10150914	10150937	143	-14.86
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1273h-5p	10151133	10151140	8mer-1a	10151121	10151140	151	-19.49
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1278	10151813	10151819	7mer-m8	10151799	10151820	147	-9.54
CAediting_256633	chr3_10151882_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1304-3p	10151881	10151887	7mer-1a	10151865	10151887	143	-21.03
CAediting_256653	chr3_10152062_+	ENSG00000134086.7	ENST00000345392	hsa-miR-1304-5p	10152055	10152062	8mer-1a	10152041	10152062	140	-12.99
CAediting_256652	chr3_10152049_+	ENSG00000134086.7	ENST00000345392	hsa-miR-193a-5p	10152047	10152053	7mer-m8	10152034	10152054	141	-14.19
CAediting_256609	chr3_10151069_+	ENSG00000134086.7	ENST00000345392	hsa-miR-200a-3p	10151067	10151073	7mer-m8	10151053	10151074	155	-15.68
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-30b-3p	10151133	10151140	8mer-1a	10151119	10151140	155	-16.01
CAediting_256643	chr3_10151981_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3145-5p	10151976	10151982	7mer-m8	10151960	10151983	142	-18.28
CAediting_256596	chr3_10150997_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3159	10150995	10151001	7mer-m8	10150981	10151002	148	-15.45
CAediting_256597	chr3_10150998_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3159	10150995	10151001	7mer-m8	10150981	10151002	148	-15.45
CAediting_256592	chr3_10150968_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3174	10150964	10150969	6mer	10150949	10150970	146	-25.96
CAediting_256610	chr3_10151089_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3190-5p	10151083	10151089	7mer-m8	10151069	10151090	148	-22
CAediting_256590	chr3_10150949_+	ENSG00000134086.7	ENST00000345392	hsa-miR-324-3p	10150946	10150952	7mer-m8	10150931	10150953	148	-24.16
CAediting_256614	chr3_10151114_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3622a-3p	10151111	10151118	8mer-1a	10151097	10151118	144	-13.56
CAediting_256614	chr3_10151114_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3622b-3p	10151111	10151118	8mer-1a	10151098	10151118	153	-19.33
CAediting_256648	chr3_10152031_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3652	10152027	10152033	7mer-m8	10152015	10152034	148	-20.61
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3689a-3p	10151133	10151140	8mer-1a	10151120	10151140	148	-21.21
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3689b-3p	10151133	10151140	8mer-1a	10151120	10151140	148	-21.26
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3689c	10151133	10151140	8mer-1a	10151120	10151140	148	-21.26
CAediting_256583	chr3_10150912_+	ENSG00000134086.7	ENST00000345392	hsa-miR-371b-5p	10150906	10150913	8mer-1a	10150892	10150913	150	-11.84
CAediting_256583	chr3_10150912_+	ENSG00000134086.7	ENST00000345392	hsa-miR-373-5p	10150906	10150913	8mer-1a	10150892	10150913	141	-8.95
CAediting_256593	chr3_10150973_+	ENSG00000134086.7	ENST00000345392	hsa-miR-377-5p	10150971	10150977	7mer-m8	10150955	10150978	150	-20.02
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-377-5p	10150971	10150977	7mer-m8	10150955	10150978	150	-20.02
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-3973	10151816	10151822	7mer-m8	10151800	10151823	155	-10.05
CAediting_256590	chr3_10150949_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4252	10150947	10150953	7mer-m8	10150934	10150954	149	-21.82
CAediting_256646	chr3_10152006_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4284	10152002	10152009	8mer-1a	10151992	10152009	151	-18.62
CAediting_256651	chr3_10152048_+	ENSG00000134086.7	ENST00000345392	hsa-miR-431-5p	10152045	10152051	7mer-m8	10152030	10152052	146	-18.72
CAediting_256652	chr3_10152049_+	ENSG00000134086.7	ENST00000345392	hsa-miR-431-5p	10152045	10152051	7mer-m8	10152030	10152052	146	-18.72
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4418	10151997	10152003	7mer-m8	10151987	10152004	143	-19.83
CAediting_256603	chr3_10151045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4435	10151038	10151045	8mer-1a	10151024	10151045	142	-16.69
CAediting_256603	chr3_10151045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4435	10151038	10151045	8mer-1a	10151024	10151045	142	-16.69
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4437	10151847	10151854	8mer-1a	10151834	10151854	146	-19.59
CAediting_256617	chr3_10151132_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4478	10151129	10151135	7mer-m8	10151120	10151136	154	-23.4
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4504	10150927	10150933	7mer-m8	10150914	10150934	155	-14.9
CAediting_256631	chr3_10151863_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4635	10151858	10151865	8mer-1a	10151845	10151865	145	-12.05
CAediting_256632	chr3_10151864_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4635	10151858	10151865	8mer-1a	10151845	10151865	145	-12.05
CAediting_256630	chr3_10151850_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4674	10151848	10151854	7mer-m8	10151835	10151855	147	-24.02
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4722-3p	10151952	10151958	7mer-m8	10151937	10151959	145	-13.91
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4763-5p	10151953	10151959	7mer-m8	10151940	10151960	147	-15.22
CAediting_256617	chr3_10151132_+	ENSG00000134086.7	ENST00000345392	hsa-miR-485-5p	10151130	10151136	7mer-m8	10151116	10151137	145	-17.12
CAediting_256643	chr3_10151981_+	ENSG00000134086.7	ENST00000345392	hsa-miR-508-5p	10151977	10151982	6mer	10151961	10151983	140	-17.39
CAediting_256589	chr3_10150944_+	ENSG00000134086.7	ENST00000345392	hsa-miR-508-5p	10150939	10150945	7mer-m8	10150924	10150946	150	-20.11
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-509-3-5p	10151997	10152003	7mer-m8	10151985	10152004	147	-17.63
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-509-5p	10151997	10152003	7mer-m8	10151984	10152004	142	-17.31
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-509-5p	10151997	10152003	7mer-m8	10151984	10152004	142	-17.31
CAediting_256611	chr3_10151100_+	ENSG00000134086.7	ENST00000345392	hsa-miR-510-3p	10151094	10151101	8mer-1a	10151081	10151101	145	-14.52
CAediting_256612	chr3_10151101_+	ENSG00000134086.7	ENST00000345392	hsa-miR-510-3p	10151094	10151101	8mer-1a	10151081	10151101	145	-14.52
CAediting_256583	chr3_10150912_+	ENSG00000134086.7	ENST00000345392	hsa-miR-514b-5p	10150908	10150913	6mer	10150891	10150914	141	-14.33
CAediting_256584	chr3_10150914_+	ENSG00000134086.7	ENST00000345392	hsa-miR-514b-5p	10150908	10150913	6mer	10150891	10150914	141	-14.33
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-541-3p	10151122	10151128	7mer-m8	10151108	10151129	155	-22.36
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548av-5p	10151051	10151057	7mer-m8	10151041	10151058	140	-8.73
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548av-5p	10151815	10151821	7mer-m8	10151807	10151822	152	-14.41
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548k	10151051	10151057	7mer-m8	10151039	10151058	142	-8.92
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548n	10151052	10151059	8mer-1a	10151040	10151059	143	-8.13
CAediting_256610	chr3_10151089_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548s	10151082	10151088	7mer-m8	10151066	10151089	148	-14.77
CAediting_256586	chr3_10150924_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5586-3p	10150921	10150927	7mer-m8	10150907	10150928	148	-10.15
CAediting_256598	chr3_10151010_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5690	10151007	10151013	7mer-m8	10150993	10151014	146	-16.91
CAediting_256649	chr3_10152043_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5691	10152041	10152048	8mer-1a	10152027	10152048	153	-22.7
CAediting_256650	chr3_10152045_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5691	10152041	10152048	8mer-1a	10152027	10152048	153	-22.7
CAediting_256651	chr3_10152048_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5691	10152041	10152048	8mer-1a	10152027	10152048	153	-22.7
CAediting_256647	chr3_10152021_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5693	10152017	10152023	7mer-m8	10152003	10152024	140	-20.67
CAediting_256635	chr3_10151932_+	ENSG00000134086.7	ENST00000345392	hsa-miR-576-3p	10151930	10151936	7mer-m8	10151916	10151937	140	-10.6
CAediting_256648	chr3_10152031_+	ENSG00000134086.7	ENST00000345392	hsa-miR-5787	10152028	10152033	6mer	10152015	10152034	144	-27.69
CAediting_256607	chr3_10151063_+	ENSG00000134086.7	ENST00000345392	hsa-miR-593-3p	10151062	10151068	7mer-1a	10151050	10151068	140	-19.44
CAediting_256608	chr3_10151067_+	ENSG00000134086.7	ENST00000345392	hsa-miR-593-3p	10151062	10151068	7mer-1a	10151050	10151068	140	-19.44
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-596	10151954	10151960	7mer-m8	10151941	10151961	151	-21.09
CAediting_256593	chr3_10150973_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6086	10150971	10150977	7mer-m8	10150959	10150978	150	-21.06
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6086	10150971	10150977	7mer-m8	10150959	10150978	150	-21.06
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6134	10151124	10151131	8mer-1a	10151113	10151131	154	-21.28
CAediting_256583	chr3_10150912_+	ENSG00000134086.7	ENST00000345392	hsa-miR-616-5p	10150906	10150913	8mer-1a	10150892	10150913	140	-7.59
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6504-3p	10151804	10151810	7mer-m8	10151790	10151811	148	-14.48
CAediting_256636	chr3_10151940_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6504-3p	10151935	10151941	7mer-m8	10151923	10151942	140	-9
CAediting_256637	chr3_10151941_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6504-3p	10151935	10151941	7mer-m8	10151923	10151942	140	-9
CAediting_256589	chr3_10150944_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6512-3p	10150937	10150943	7mer-m8	10150923	10150944	140	-19.62
CAediting_256593	chr3_10150973_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6516-5p	10150967	10150973	7mer-m8	10150952	10150974	149	-15.13
CAediting_256594	chr3_10150974_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6516-5p	10150967	10150973	7mer-m8	10150952	10150974	149	-15.13
CAediting_256616	chr3_10151127_+	ENSG00000134086.7	ENST00000345392	hsa-miR-654-5p	10151122	10151128	7mer-m8	10151109	10151129	149	-19.51
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-661	10150933	10150939	7mer-m8	10150917	10150940	153	-18.75
CAediting_256600	chr3_10151022_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6720-3p	10151020	10151026	7mer-m8	10151006	10151027	148	-18.9
CAediting_256589	chr3_10150944_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6720-5p	10150937	10150943	7mer-m8	10150923	10150944	152	-24.48
CAediting_256639	chr3_10151957_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6727-3p	10151952	10151958	7mer-m8	10151940	10151959	140	-12.2
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6736-5p	10150930	10150936	7mer-m8	10150917	10150937	141	-19.63
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6736-5p	10150930	10150936	7mer-m8	10150917	10150937	141	-19.63
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6742-3p	10150932	10150938	7mer-m8	10150920	10150939	140	-13.49
CAediting_256608	chr3_10151067_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6760-3p	10151065	10151071	7mer-m8	10151053	10151072	145	-14.58
CAediting_256609	chr3_10151069_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6760-3p	10151065	10151071	7mer-m8	10151053	10151072	145	-14.58
CAediting_256587	chr3_10150933_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6776-5p	10150931	10150937	7mer-m8	10150919	10150938	148	-22.92
CAediting_256588	chr3_10150937_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6776-5p	10150931	10150937	7mer-m8	10150919	10150938	148	-22.92
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6779-5p	10151133	10151140	8mer-1a	10151122	10151140	152	-23.33
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6780a-5p	10151133	10151140	8mer-1a	10151117	10151140	146	-20.74
CAediting_256628	chr3_10151831_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6813-3p	10151828	10151835	8mer-1a	10151815	10151835	145	-17.98
CAediting_256608	chr3_10151067_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6818-3p	10151062	10151068	7mer-m8	10151048	10151069	140	-12.56
CAediting_256609	chr3_10151069_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6818-3p	10151062	10151068	7mer-m8	10151048	10151069	140	-12.56
CAediting_256634	chr3_10151889_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6839-3p	10151887	10151892	6mer	10151871	10151893	147	-22.31
CAediting_256629	chr3_10151837_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6881-3p	10151835	10151841	7mer-m8	10151819	10151842	155	-19.44
CAediting_256617	chr3_10151132_+	ENSG00000134086.7	ENST00000345392	hsa-miR-6884-5p	10151130	10151136	7mer-m8	10151116	10151137	154	-23.23
CAediting_256601	chr3_10151033_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7150	10151026	10151032	7mer-m8	10151016	10151033	142	-14.61
CAediting_256625	chr3_10151809_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7151-3p	10151802	10151809	8mer-1a	10151789	10151809	152	-18.13
CAediting_256645	chr3_10152002_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7156-3p	10151995	10152001	7mer-m8	10151977	10152002	147	-19.72
CAediting_256589	chr3_10150944_+	ENSG00000134086.7	ENST00000345392	hsa-miR-766-3p	10150938	10150944	7mer-m8	10150924	10150945	145	-17.93
CAediting_256599	chr3_10151017_+	ENSG00000134086.7	ENST00000345392	hsa-miR-7977	10151010	10151016	7mer-m8	10151001	10151017	145	-13.47
CAediting_256605	chr3_10151054_+	ENSG00000134086.7	ENST00000345392	hsa-miR-8054	10151051	10151057	7mer-m8	10151036	10151058	154	-14.75
CAediting_256626	chr3_10151818_+	ENSG00000134086.7	ENST00000345392	hsa-miR-8054	10151815	10151821	7mer-m8	10151798	10151822	145	-17.62
CAediting_256618	chr3_10151140_+	ENSG00000134086.7	ENST00000345392	hsa-miR-887-5p	10151134	10151141	8mer-1a	10151122	10151141	143	-13.53

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000134086.7	ENST00000345392	hsa-miR-200b-3p	10151185	10151191	7mer-m8	10151170	10151192	141	-14.39
CAediting_688081	chr9_63819627_+	ENSG00000134086.7	ENST00000345392	hsa-miR-4477b	10151400	10151406	7mer-m8	10151386	10151407	140	-11.36
CAediting_1229413	chr17_67471544_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548aa	10151092	10151099	8mer-1a	10151075	10151099	140	-10.74

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_846604	chr11_93733708_-	ENSG00000134086.7	ENST00000345392	hsa-miR-1304-3p	10151881	10151887	7mer-1a	10151865	10151887	143	-21.03
CAediting_396018	chr5_1062918_-	ENSG00000134086.7	ENST00000345392	hsa-miR-4635	10151858	10151865	8mer-1a	10151845	10151865	145	-12.05
CAediting_1229413	chr17_67471544_+	ENSG00000134086.7	ENST00000345392	hsa-miR-548aa	10151563	10151569	7mer-m8	10151547	10151570	153	-16.1
CAediting_1351755	chr19_40282625_-	ENSG00000134086.7	ENST00000345392	hsa-miR-641	10150588	10150595	8mer-1a	10150570	10150595	147	-10.9

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for VHL

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000256474.2	protein_coding
ENST00000345392.2	protein_coding
ENST00000477538.1	processed_transcript

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_256583	ENST00000256474.2	chr3_10150912_+	-1419.70	-1420.60	-1481.90
CAediting_256584	ENST00000256474.2	chr3_10150914_+	-1417.40	-1420.60	-1481.90
CAediting_256585	ENST00000256474.2	chr3_10150918_+	-1427.50	-1420.60	-1481.90
CAediting_256586	ENST00000256474.2	chr3_10150924_+	-1420.20	-1420.60	-1481.90
CAediting_256587	ENST00000256474.2	chr3_10150933_+	-1426.00	-1420.60	-1481.90
CAediting_256588	ENST00000256474.2	chr3_10150937_+	-1426.80	-1420.60	-1481.90
CAediting_256589	ENST00000256474.2	chr3_10150944_+	-1419.70	-1420.60	-1481.90
CAediting_256590	ENST00000256474.2	chr3_10150949_+	-1419.90	-1420.60	-1481.90
CAediting_256591	ENST00000256474.2	chr3_10150958_+	-1420.60	-1420.60	-1481.90
CAediting_256592	ENST00000256474.2	chr3_10150968_+	-1420.20	-1420.60	-1481.90
CAediting_256593	ENST00000256474.2	chr3_10150973_+	-1421.00	-1420.60	-1481.90
CAediting_256594	ENST00000256474.2	chr3_10150974_+	-1427.30	-1420.60	-1481.90
CAediting_256595	ENST00000256474.2	chr3_10150993_+	-1420.30	-1420.60	-1481.90
CAediting_256596	ENST00000256474.2	chr3_10150997_+	-1427.00	-1420.60	-1481.90
CAediting_256597	ENST00000256474.2	chr3_10150998_+	-1422.80	-1420.60	-1481.90
CAediting_256598	ENST00000256474.2	chr3_10151010_+	-1420.50	-1420.60	-1481.90
CAediting_256599	ENST00000256474.2	chr3_10151017_+	-1420.00	-1420.60	-1481.90
CAediting_256600	ENST00000256474.2	chr3_10151022_+	-1420.30	-1420.60	-1481.90
CAediting_256601	ENST00000256474.2	chr3_10151033_+	-1420.20	-1420.60	-1481.90
CAediting_256602	ENST00000256474.2	chr3_10151036_+	-1422.10	-1420.60	-1481.90
CAediting_256603	ENST00000256474.2	chr3_10151045_+	-1422.00	-1420.60	-1481.90
CAediting_256604	ENST00000256474.2	chr3_10151046_+	-1420.90	-1420.60	-1481.90
CAediting_256605	ENST00000256474.2	chr3_10151054_+	-1420.30	-1420.60	-1481.90
CAediting_256606	ENST00000256474.2	chr3_10151060_+	-1420.30	-1420.60	-1481.90
CAediting_256607	ENST00000256474.2	chr3_10151063_+	-1420.30	-1420.60	-1481.90
CAediting_256608	ENST00000256474.2	chr3_10151067_+	-1419.30	-1420.60	-1481.90
CAediting_256609	ENST00000256474.2	chr3_10151069_+	-1424.40	-1420.60	-1481.90
CAediting_256610	ENST00000256474.2	chr3_10151089_+	-1419.90	-1420.60	-1481.90
CAediting_256611	ENST00000256474.2	chr3_10151100_+	-1426.60	-1420.60	-1481.90
CAediting_256612	ENST00000256474.2	chr3_10151101_+	-1420.90	-1420.60	-1481.90
CAediting_256613	ENST00000256474.2	chr3_10151102_+	-1420.60	-1420.60	-1481.90
CAediting_256614	ENST00000256474.2	chr3_10151114_+	-1419.90	-1420.60	-1481.90
CAediting_256615	ENST00000256474.2	chr3_10151119_+	-1420.00	-1420.60	-1481.90
CAediting_256616	ENST00000256474.2	chr3_10151127_+	-1420.20	-1420.60	-1481.90
CAediting_256617	ENST00000256474.2	chr3_10151132_+	-1425.80	-1420.60	-1481.90
CAediting_256618	ENST00000256474.2	chr3_10151140_+	-1420.30	-1420.60	-1481.90
CAediting_256619	ENST00000256474.2	chr3_10151142_+	-1420.30	-1420.60	-1481.90
CAediting_256620	ENST00000256474.2	chr3_10151154_+	-1420.60	-1420.60	-1481.90
CAediting_256621	ENST00000256474.2	chr3_10151156_+	-1419.90	-1420.60	-1481.90
CAediting_256622	ENST00000256474.2	chr3_10151169_+	-1420.20	-1420.60	-1481.90
CAediting_256623	ENST00000256474.2	chr3_10151242_+	-1423.40	-1420.60	-1481.90
CAediting_256624	ENST00000256474.2	chr3_10151674_+	-1420.20	-1420.60	-1481.90
CAediting_256625	ENST00000256474.2	chr3_10151809_+	-1422.00	-1420.60	-1481.90
CAediting_256626	ENST00000256474.2	chr3_10151818_+	-1420.60	-1420.60	-1481.90
CAediting_256627	ENST00000256474.2	chr3_10151827_+	-1420.50	-1420.60	-1481.90
CAediting_256628	ENST00000256474.2	chr3_10151831_+	-1420.30	-1420.60	-1481.90
CAediting_256629	ENST00000256474.2	chr3_10151837_+	-1421.90	-1420.60	-1481.90
CAediting_256630	ENST00000256474.2	chr3_10151850_+	-1419.70	-1420.60	-1481.90
CAediting_256631	ENST00000256474.2	chr3_10151863_+	-1420.20	-1420.60	-1481.90
CAediting_256632	ENST00000256474.2	chr3_10151864_+	-1420.60	-1420.60	-1481.90
CAediting_256633	ENST00000256474.2	chr3_10151882_+	-1420.60	-1420.60	-1481.90
CAediting_256634	ENST00000256474.2	chr3_10151889_+	-1421.00	-1420.60	-1481.90
CAediting_256635	ENST00000256474.2	chr3_10151932_+	-1420.20	-1420.60	-1481.90
CAediting_256636	ENST00000256474.2	chr3_10151940_+	-1420.40	-1420.60	-1481.90
CAediting_256637	ENST00000256474.2	chr3_10151941_+	-1422.30	-1420.60	-1481.90
CAediting_256638	ENST00000256474.2	chr3_10151946_+	-1420.90	-1420.60	-1481.90
CAediting_256639	ENST00000256474.2	chr3_10151957_+	-1420.80	-1420.60	-1481.90
CAediting_256640	ENST00000256474.2	chr3_10151963_+	-1421.80	-1420.60	-1481.90
CAediting_256641	ENST00000256474.2	chr3_10151968_+	-1421.00	-1420.60	-1481.90
CAediting_256642	ENST00000256474.2	chr3_10151971_+	-1420.60	-1420.60	-1481.90
CAediting_256643	ENST00000256474.2	chr3_10151981_+	-1420.60	-1420.60	-1481.90
CAediting_256644	ENST00000256474.2	chr3_10151986_+	-1421.50	-1420.60	-1481.90
CAediting_256645	ENST00000256474.2	chr3_10152002_+	-1422.70	-1420.60	-1481.90
CAediting_256646	ENST00000256474.2	chr3_10152006_+	-1422.10	-1420.60	-1481.90
CAediting_256647	ENST00000256474.2	chr3_10152021_+	-1420.20	-1420.60	-1481.90
CAediting_256648	ENST00000256474.2	chr3_10152031_+	-1421.00	-1420.60	-1481.90
CAediting_256649	ENST00000256474.2	chr3_10152043_+	-1421.10	-1420.60	-1481.90
CAediting_256650	ENST00000256474.2	chr3_10152045_+	-1427.50	-1420.60	-1481.90
CAediting_256651	ENST00000256474.2	chr3_10152048_+	-1420.60	-1420.60	-1481.90
CAediting_256652	ENST00000256474.2	chr3_10152049_+	-1422.70	-1420.60	-1481.90
CAediting_256653	ENST00000256474.2	chr3_10152062_+	-1420.60	-1420.60	-1481.90
CAediting_256654	ENST00000256474.2	chr3_10152063_+	-1420.60	-1420.60	-1481.90
CAediting_256655	ENST00000256474.2	chr3_10152064_+	-1420.60	-1420.60	-1481.90
CAediting_256656	ENST00000256474.2	chr3_10152065_+	-1420.80	-1420.60	-1481.90
CAediting_256657	ENST00000256474.2	chr3_10152066_+	-1421.10	-1420.60	-1481.90
CAediting_256658	ENST00000256474.2	chr3_10152071_+	-1420.70	-1420.60	-1481.90
CAediting_256659	ENST00000256474.2	chr3_10152074_+	-1420.70	-1420.60	-1481.90
CAediting_256660	ENST00000256474.2	chr3_10152076_+	-1421.60	-1420.60	-1481.90
CAediting_256661	ENST00000256474.2	chr3_10152094_+	-1417.20	-1420.60	-1481.90
CAediting_256662	ENST00000256474.2	chr3_10152104_+	-1420.20	-1420.60	-1481.90
CAediting_256663	ENST00000256474.2	chr3_10152112_+	-1420.70	-1420.60	-1481.90
CAediting_256664	ENST00000256474.2	chr3_10152113_+	-1420.60	-1420.60	-1481.90
CAediting_256665	ENST00000256474.2	chr3_10152118_+	-1419.90	-1420.60	-1481.90
CAediting_256666	ENST00000256474.2	chr3_10152121_+	-1419.90	-1420.60	-1481.90
CAediting_256667	ENST00000256474.2	chr3_10152143_+	-1426.80	-1420.60	-1481.90
CAediting_256668	ENST00000256474.2	chr3_10152148_+	-1420.20	-1420.60	-1481.90
CAediting_256669	ENST00000256474.2	chr3_10152153_+	-1419.70	-1420.60	-1481.90
CAediting_256670	ENST00000256474.2	chr3_10152158_+	-1419.90	-1420.60	-1481.90
CAediting_256671	ENST00000256474.2	chr3_10152161_+	-1419.70	-1420.60	-1481.90
CAediting_256672	ENST00000256474.2	chr3_10152167_+	-1419.60	-1420.60	-1481.90
CAediting_256673	ENST00000256474.2	chr3_10152169_+	-1420.10	-1420.60	-1481.90
CAediting_256674	ENST00000256474.2	chr3_10152172_+	-1419.90	-1420.60	-1481.90
CAediting_256675	ENST00000256474.2	chr3_10152181_+	-1420.30	-1420.60	-1481.90
CAediting_256676	ENST00000256474.2	chr3_10152182_+	-1420.60	-1420.60	-1481.90
CAediting_256677	ENST00000256474.2	chr3_10152184_+	-1420.20	-1420.60	-1481.90
CAediting_256678	ENST00000256474.2	chr3_10152190_+	-1420.50	-1420.60	-1481.90
CAediting_256679	ENST00000256474.2	chr3_10152191_+	-1420.70	-1420.60	-1481.90
CAediting_256680	ENST00000256474.2	chr3_10152192_+	-1420.60	-1420.60	-1481.90
CAediting_256681	ENST00000256474.2	chr3_10152197_+	-1424.00	-1420.60	-1481.90
CAediting_256682	ENST00000256474.2	chr3_10152203_+	-1420.60	-1420.60	-1481.90
CAediting_256683	ENST00000256474.2	chr3_10152206_+	-1420.70	-1420.60	-1481.90
CAediting_256684	ENST00000256474.2	chr3_10152207_+	-1420.70	-1420.60	-1481.90
CAediting_256685	ENST00000256474.2	chr3_10152208_+	-1420.70	-1420.60	-1481.90
CAediting_256686	ENST00000256474.2	chr3_10152209_+	-1420.30	-1420.60	-1481.90
CAediting_256687	ENST00000256474.2	chr3_10152210_+	-1424.80	-1420.60	-1481.90
CAediting_256688	ENST00000256474.2	chr3_10152213_+	-1420.60	-1420.60	-1481.90
CAediting_256689	ENST00000256474.2	chr3_10152215_+	-1420.30	-1420.60	-1481.90
CAediting_256690	ENST00000256474.2	chr3_10152216_+	-1420.20	-1420.60	-1481.90
CAediting_256691	ENST00000256474.2	chr3_10152219_+	-1420.60	-1420.60	-1481.90
CAediting_256583	ENST00000345392.2	chr3_10150912_+	-963.60	-964.40	-1032.40
CAediting_256584	ENST00000345392.2	chr3_10150914_+	-971.20	-964.40	-1032.40
CAediting_256585	ENST00000345392.2	chr3_10150918_+	-971.10	-964.40	-1032.40
CAediting_256586	ENST00000345392.2	chr3_10150924_+	-968.00	-964.40	-1032.40
CAediting_256587	ENST00000345392.2	chr3_10150933_+	-967.10	-964.40	-1032.40
CAediting_256588	ENST00000345392.2	chr3_10150937_+	-963.70	-964.40	-1032.40
CAediting_256589	ENST00000345392.2	chr3_10150944_+	-963.50	-964.40	-1032.40
CAediting_256590	ENST00000345392.2	chr3_10150949_+	-963.70	-964.40	-1032.40
CAediting_256591	ENST00000345392.2	chr3_10150958_+	-964.40	-964.40	-1032.40
CAediting_256592	ENST00000345392.2	chr3_10150968_+	-964.00	-964.40	-1032.40
CAediting_256593	ENST00000345392.2	chr3_10150973_+	-963.70	-964.40	-1032.40
CAediting_256594	ENST00000345392.2	chr3_10150974_+	-971.10	-964.40	-1032.40
CAediting_256595	ENST00000345392.2	chr3_10150993_+	-964.40	-964.40	-1032.40
CAediting_256596	ENST00000345392.2	chr3_10150997_+	-964.50	-964.40	-1032.40
CAediting_256597	ENST00000345392.2	chr3_10150998_+	-964.40	-964.40	-1032.40
CAediting_256598	ENST00000345392.2	chr3_10151010_+	-967.00	-964.40	-1032.40
CAediting_256599	ENST00000345392.2	chr3_10151017_+	-963.80	-964.40	-1032.40
CAediting_256600	ENST00000345392.2	chr3_10151022_+	-966.80	-964.40	-1032.40
CAediting_256601	ENST00000345392.2	chr3_10151033_+	-967.60	-964.40	-1032.40
CAediting_256602	ENST00000345392.2	chr3_10151036_+	-964.10	-964.40	-1032.40
CAediting_256603	ENST00000345392.2	chr3_10151045_+	-964.10	-964.40	-1032.40
CAediting_256604	ENST00000345392.2	chr3_10151046_+	-962.50	-964.40	-1032.40
CAediting_256605	ENST00000345392.2	chr3_10151054_+	-964.40	-964.40	-1032.40
CAediting_256606	ENST00000345392.2	chr3_10151060_+	-964.40	-964.40	-1032.40
CAediting_256607	ENST00000345392.2	chr3_10151063_+	-964.70	-964.40	-1032.40
CAediting_256608	ENST00000345392.2	chr3_10151067_+	-963.80	-964.40	-1032.40
CAediting_256609	ENST00000345392.2	chr3_10151069_+	-967.30	-964.40	-1032.40
CAediting_256610	ENST00000345392.2	chr3_10151089_+	-963.70	-964.40	-1032.40
CAediting_256611	ENST00000345392.2	chr3_10151100_+	-965.20	-964.40	-1032.40
CAediting_256612	ENST00000345392.2	chr3_10151101_+	-964.40	-964.40	-1032.40
CAediting_256613	ENST00000345392.2	chr3_10151102_+	-964.40	-964.40	-1032.40
CAediting_256614	ENST00000345392.2	chr3_10151114_+	-967.00	-964.40	-1032.40
CAediting_256615	ENST00000345392.2	chr3_10151119_+	-963.80	-964.40	-1032.40
CAediting_256616	ENST00000345392.2	chr3_10151127_+	-964.00	-964.40	-1032.40
CAediting_256617	ENST00000345392.2	chr3_10151132_+	-965.80	-964.40	-1032.40
CAediting_256618	ENST00000345392.2	chr3_10151140_+	-964.10	-964.40	-1032.40
CAediting_256619	ENST00000345392.2	chr3_10151142_+	-967.20	-964.40	-1032.40
CAediting_256620	ENST00000345392.2	chr3_10151154_+	-964.40	-964.40	-1032.40
CAediting_256621	ENST00000345392.2	chr3_10151156_+	-963.70	-964.40	-1032.40
CAediting_256622	ENST00000345392.2	chr3_10151169_+	-964.00	-964.40	-1032.40
CAediting_256623	ENST00000345392.2	chr3_10151242_+	-969.70	-964.40	-1032.40
CAediting_256624	ENST00000345392.2	chr3_10151674_+	-964.00	-964.40	-1032.40
CAediting_256625	ENST00000345392.2	chr3_10151809_+	-963.50	-964.40	-1032.40
CAediting_256626	ENST00000345392.2	chr3_10151818_+	-964.40	-964.40	-1032.40
CAediting_256627	ENST00000345392.2	chr3_10151827_+	-968.40	-964.40	-1032.40
CAediting_256628	ENST00000345392.2	chr3_10151831_+	-965.60	-964.40	-1032.40
CAediting_256629	ENST00000345392.2	chr3_10151837_+	-966.20	-964.40	-1032.40
CAediting_256630	ENST00000345392.2	chr3_10151850_+	-963.50	-964.40	-1032.40
CAediting_256631	ENST00000345392.2	chr3_10151863_+	-965.50	-964.40	-1032.40
CAediting_256632	ENST00000345392.2	chr3_10151864_+	-964.40	-964.40	-1032.40
CAediting_256633	ENST00000345392.2	chr3_10151882_+	-966.00	-964.40	-1032.40
CAediting_256634	ENST00000345392.2	chr3_10151889_+	-965.30	-964.40	-1032.40
CAediting_256635	ENST00000345392.2	chr3_10151932_+	-966.10	-964.40	-1032.40
CAediting_256636	ENST00000345392.2	chr3_10151940_+	-964.50	-964.40	-1032.40
CAediting_256637	ENST00000345392.2	chr3_10151941_+	-964.40	-964.40	-1032.40
CAediting_256638	ENST00000345392.2	chr3_10151946_+	-963.10	-964.40	-1032.40
CAediting_256639	ENST00000345392.2	chr3_10151957_+	-964.40	-964.40	-1032.40
CAediting_256640	ENST00000345392.2	chr3_10151963_+	-963.50	-964.40	-1032.40
CAediting_256641	ENST00000345392.2	chr3_10151968_+	-971.30	-964.40	-1032.40
CAediting_256642	ENST00000345392.2	chr3_10151971_+	-968.50	-964.40	-1032.40
CAediting_256643	ENST00000345392.2	chr3_10151981_+	-966.00	-964.40	-1032.40
CAediting_256644	ENST00000345392.2	chr3_10151986_+	-963.40	-964.40	-1032.40
CAediting_256645	ENST00000345392.2	chr3_10152002_+	-963.70	-964.40	-1032.40
CAediting_256646	ENST00000345392.2	chr3_10152006_+	-963.50	-964.40	-1032.40
CAediting_256647	ENST00000345392.2	chr3_10152021_+	-964.00	-964.40	-1032.40
CAediting_256648	ENST00000345392.2	chr3_10152031_+	-963.70	-964.40	-1032.40
CAediting_256649	ENST00000345392.2	chr3_10152043_+	-963.70	-964.40	-1032.40
CAediting_256650	ENST00000345392.2	chr3_10152045_+	-963.80	-964.40	-1032.40
CAediting_256651	ENST00000345392.2	chr3_10152048_+	-968.60	-964.40	-1032.40
CAediting_256652	ENST00000345392.2	chr3_10152049_+	-963.90	-964.40	-1032.40
CAediting_256653	ENST00000345392.2	chr3_10152062_+	-964.50	-964.40	-1032.40
CAediting_256654	ENST00000345392.2	chr3_10152063_+	-964.50	-964.40	-1032.40
CAediting_256655	ENST00000345392.2	chr3_10152064_+	-964.50	-964.40	-1032.40
CAediting_256656	ENST00000345392.2	chr3_10152065_+	-964.50	-964.40	-1032.40
CAediting_256657	ENST00000345392.2	chr3_10152066_+	-964.50	-964.40	-1032.40
CAediting_256658	ENST00000345392.2	chr3_10152071_+	-964.80	-964.40	-1032.40
CAediting_256659	ENST00000345392.2	chr3_10152074_+	-966.10	-964.40	-1032.40
CAediting_256660	ENST00000345392.2	chr3_10152076_+	-965.60	-964.40	-1032.40
CAediting_256461	ENST00000477538.1	chr3_10142606_+	-310.80	-310.00	-316.20
CAediting_256462	ENST00000477538.1	chr3_10142618_+	-310.00	-310.00	-316.20
CAediting_256463	ENST00000477538.1	chr3_10142624_+	-315.40	-310.00	-316.20

Top

Relation with ADAR for VHL

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BLCA	CAediting_256583	chr3_10150912_+	0.0207488144927588	0.219298538589962	.	.	.	.
BRCA	CAediting_256583	chr3_10150912_+	0.0144251024270575	0.119447963715354	.	.	.	.
LUSC	CAediting_256583	chr3_10150912_+	0.0188840713434823	0.204135611656319	.	.	.	.
PRAD	CAediting_256583	chr3_10150912_+	0.00390463396391296	0.348009295014953	.	.	.	.
HNSC	CAediting_256583	chr3_10150912_+	0.0411393802199111	0.182216713198966	.	.	.	.
STAD	CAediting_256583	chr3_10150912_+	5.51676502795472e-05	0.339841839376469	.	.	.	.
ESCA	CAediting_256583	chr3_10150912_+	.	.	0.0375615340710191	0.254651884460333	.	.
SARC	CAediting_256583	chr3_10150912_+	0.00144218057338546	0.378878728921667	.	.	.	.
BLCA	CAediting_256586	chr3_10150924_+	1.24323844238084e-06	0.292683989459692	.	.	0.0345537139826634	0.129897826346355
LGG	CAediting_256586	chr3_10150924_+	0.000134299605398769	0.215882369963813	.	.	.	.
BRCA	CAediting_256586	chr3_10150924_+	2.35453369685291e-19	0.302101546057605	.	.	.	.
LIHC	CAediting_256586	chr3_10150924_+	0.000111958878255507	0.341290186463946	.	.	.	.
CESC	CAediting_256586	chr3_10150924_+	0.0313915790861767	0.165139916649961	.	.	.	.
LUSC	CAediting_256586	chr3_10150924_+	0.000112152718008956	0.230415222780954	0.0400023131724737	0.123705937354635	.	.
GBM	CAediting_256586	chr3_10150924_+	1.41664111775583e-05	0.330911668315004	.	.	.	.
PRAD	CAediting_256586	chr3_10150924_+	0.00915122480106159	0.140748461748478	.	.	.	.
HNSC	CAediting_256586	chr3_10150924_+	0.00129907151719922	0.206867331995504	.	.	.	.
STAD	CAediting_256586	chr3_10150924_+	0.0098595171197762	0.14145591665413	.	.	.	.
UCEC	CAediting_256586	chr3_10150924_+	0.00387885956506855	0.141133727149669	.	.	.	.
ESCA	CAediting_256586	chr3_10150924_+	0.00580801286151089	0.216497031919899	.	.	.	.
OV	CAediting_256586	chr3_10150924_+	0.0147920511898229	0.137228895697225	.	.	.	.
SKCM	CAediting_256586	chr3_10150924_+	0.0002111877712297	0.243032289041732	.	.	.	.
MESO	CAediting_256586	chr3_10150924_+	0.0250578122293944	0.29925272281941	.	.	.	.
SARC	CAediting_256586	chr3_10150924_+	0.0212369239348634	0.178713804456269	.	.	.	.
THYM	CAediting_256586	chr3_10150924_+	.	.	.	.	0.028883178314193	0.294824445501528
BRCA	CAediting_256587	chr3_10150933_+	0.00553955955932537	0.174955945004955	.	.	.	.
GBM	CAediting_256587	chr3_10150933_+	0.00126863578846367	0.329288604653393	.	.	.	.
STAD	CAediting_256587	chr3_10150933_+	0.000787684601098396	0.200920190557807	.	.	.	.
UCEC	CAediting_256587	chr3_10150933_+	0.00101617651042369	0.233554597252277	.	.	.	.
ESCA	CAediting_256587	chr3_10150933_+	4.78463521592423e-05	0.34127238258574	.	.	.	.
OV	CAediting_256587	chr3_10150933_+	3.66448696017971e-10	0.383813106504862	.	.	.	.
BRCA	CAediting_256591	chr3_10150958_+	0.000624929001450472	0.179191529119068	.	.	.	.
LUSC	CAediting_256591	chr3_10150958_+	.	.	.	.	0.0249252128944924	0.26060656627363
THCA	CAediting_256591	chr3_10150958_+	0.000625345719958427	0.367763873844042	.	.	.	.
UCEC	CAediting_256591	chr3_10150958_+	0.0214462333360775	0.164221656748968	.	.	.	.
ESCA	CAediting_256591	chr3_10150958_+	.	.	0.000189993662984678	0.36310600198409	.	.
UCEC	CAediting_256592	chr3_10150968_+	.	.	0.0087052300486033	0.297044287854502	0.000322276395485488	0.399229398671976
BRCA	CAediting_256598	chr3_10151010_+	6.31820491806408e-09	0.237803071912618	.	.	.	.
LUAD	CAediting_256598	chr3_10151010_+	1.40947327106272e-06	0.325687786850881	.	.	.	.
THCA	CAediting_256598	chr3_10151010_+	0.00186139793505506	0.218717124887947	.	.	.	.
UCEC	CAediting_256598	chr3_10151010_+	0.04542846830265	0.115991448206841	0.00554314596987792	0.160306507505551	.	.
TGCT	CAediting_256598	chr3_10151010_+	0.0401635757197125	0.221761332375765	.	.	.	.
BLCA	CAediting_256601	chr3_10151033_+	0.00271874797484278	0.234782951149093	.	.	.	.
LGG	CAediting_256601	chr3_10151033_+	7.41841454140707e-06	0.404316236993442	.	.	.	.
BRCA	CAediting_256601	chr3_10151033_+	8.22395742584974e-08	0.221887209050739	.	.	.	.
LUAD	CAediting_256601	chr3_10151033_+	0.00545812660933636	0.18034834160539	.	.	.	.
COAD	CAediting_256601	chr3_10151033_+	0.00515570003623082	0.297370231662922	.	.	.	.
LUSC	CAediting_256601	chr3_10151033_+	0.0214250800426596	0.166818858084061	.	.	.	.
UCEC	CAediting_256601	chr3_10151033_+	0.00515698123390405	0.186289972967022	.	.	.	.
SARC	CAediting_256601	chr3_10151033_+	0.0204401599945519	0.213214347139398	.	.	.	.
BLCA	CAediting_256606	chr3_10151060_+	0.0446341168156804	0.147428329678841	.	.	0.0420059938608286	0.149270462583573
LGG	CAediting_256606	chr3_10151060_+	1.29159543484884e-06	0.376278726378136	.	.	.	.
BRCA	CAediting_256606	chr3_10151060_+	5.66581432624137e-09	0.219181595866607	.	.	.	.
LIHC	CAediting_256606	chr3_10151060_+	0.000770306302833526	0.294697663264795	.	.	.	.
CESC	CAediting_256606	chr3_10151060_+	0.0198847110764983	0.200979035908993	.	.	.	.
COAD	CAediting_256606	chr3_10151060_+	0.0368503863091708	0.226810786290474	.	.	.	.
LUSC	CAediting_256606	chr3_10151060_+	0.000355516275039951	0.256420069530854	.	.	.	.
GBM	CAediting_256606	chr3_10151060_+	0.0296953427753952	0.241732391644343	.	.	.	.
PRAD	CAediting_256606	chr3_10151060_+	0.000937480104125457	0.224077865546851	.	.	.	.
HNSC	CAediting_256606	chr3_10151060_+	0.0167068175557483	0.16499081669562	.	.	.	.
STAD	CAediting_256606	chr3_10151060_+	0.0305078658890012	0.137420006835043	.	.	.	.
UCEC	CAediting_256606	chr3_10151060_+	3.53573959083137e-05	0.253041413267149	.	.	.	.
OV	CAediting_256606	chr3_10151060_+	0.00570377880959949	0.190149114385498	.	.	.	.
TGCT	CAediting_256606	chr3_10151060_+	0.0175681019681379	0.271741633761064	.	.	.	.
BLCA	CAediting_256607	chr3_10151063_+	0.00124995433702578	0.168982418776235	.	.	.	.
LGG	CAediting_256607	chr3_10151063_+	0.00228984058863291	0.135558471201534	.	.	.	.
BRCA	CAediting_256607	chr3_10151063_+	3.93601792605675e-05	0.130270046526583	.	.	.	.
LIHC	CAediting_256607	chr3_10151063_+	.	.	.	.	0.00442821359089486	0.208908295621525
CESC	CAediting_256607	chr3_10151063_+	0.00738019537428503	0.167413753299521	0.0397703473061602	0.128855434566548	.	.
COAD	CAediting_256607	chr3_10151063_+	0.0456056536931285	0.111487355703371	.	.	.	.
LUSC	CAediting_256607	chr3_10151063_+	0.000106060803804189	0.193799373657049	.	.	.	.
GBM	CAediting_256607	chr3_10151063_+	0.00658836817663564	0.220939131122873	.	.	.	.
HNSC	CAediting_256607	chr3_10151063_+	0.0261996269977828	0.116055674388626	.	.	.	.
SKCM	CAediting_256607	chr3_10151063_+	0.00377816228303531	0.151649470253953	.	.	.	.
UCS	CAediting_256607	chr3_10151063_+	0.0405015481305611	0.290776949477773	.	.	.	.
SARC	CAediting_256607	chr3_10151063_+	0.045302922586408	0.135733343181842	.	.	0.0219717451646428	0.155107878831932
TGCT	CAediting_256607	chr3_10151063_+	0.0092534019857235	0.223233455364539	.	.	0.0259960836507303	0.191609611839482
BLCA	CAediting_256609	chr3_10151069_+	2.51864161538173e-06	0.262000395017553	.	.	.	.
LGG	CAediting_256609	chr3_10151069_+	0.0127107731433753	0.117123753994967	.	.	.	.
BRCA	CAediting_256609	chr3_10151069_+	4.53979450082132e-20	0.30015607239389	.	.	.	.
LIHC	CAediting_256609	chr3_10151069_+	0.0220643153731343	0.20464146762793	.	.	.	.
CESC	CAediting_256609	chr3_10151069_+	0.0191005181022419	0.162006916221007	.	.	.	.
LUAD	CAediting_256609	chr3_10151069_+	0.00169558848850545	0.188106354112202	.	.	.	.
COAD	CAediting_256609	chr3_10151069_+	0.000261976848734553	0.232624750396632	0.00788554767971426	0.170425143926233	.	.
LUSC	CAediting_256609	chr3_10151069_+	6.83598884475329e-08	0.297331303549302	.	.	.	.
GBM	CAediting_256609	chr3_10151069_+	0.00950836301346561	0.224949303649302	.	.	.	.
PRAD	CAediting_256609	chr3_10151069_+	0.000293898024522213	0.179667999673711	.	.	.	.
STAD	CAediting_256609	chr3_10151069_+	5.07795812449646e-07	0.270730144292333	.	.	.	.
THCA	CAediting_256609	chr3_10151069_+	8.98867499605437e-05	0.195277929931651	.	.	.	.
UCEC	CAediting_256609	chr3_10151069_+	3.7183449781093e-06	0.228126809890985	.	.	.	.
ESCA	CAediting_256609	chr3_10151069_+	0.0274121943194639	0.173854139002063	0.0333476853946374	0.167816247424098	.	.
SKCM	CAediting_256609	chr3_10151069_+	0.000364071282175163	0.209369621967259	.	.	.	.
SARC	CAediting_256609	chr3_10151069_+	0.000795875557082577	0.241953719859184	.	.	.	.
TGCT	CAediting_256609	chr3_10151069_+	8.8075813277857e-08	0.468463039392315	.	.	.	.
THYM	CAediting_256609	chr3_10151069_+	0.00767516167054696	0.292437957872752	.	.	0.00186343269860977	0.338562570172714
UCEC	CAediting_256611	chr3_10151100_+	.	.	0.00920208797691726	0.270157904076969	.	.
LGG	CAediting_256616	chr3_10151127_+	0.000131388299007115	0.253298431105768	.	.	.	.
BRCA	CAediting_256616	chr3_10151127_+	4.87151069232286e-05	0.164482339530839	.	.	.	.
GBM	CAediting_256616	chr3_10151127_+	0.0264960505284466	0.201730228703407	.	.	.	.
PRAD	CAediting_256616	chr3_10151127_+	0.0288809287138586	0.131078726291508	.	.	.	.
HNSC	CAediting_256616	chr3_10151127_+	0.0143444183375259	0.203674959258797	.	.	.	.
STAD	CAediting_256616	chr3_10151127_+	0.0307702797028378	0.126658020113556	.	.	.	.
UCEC	CAediting_256616	chr3_10151127_+	0.0242057446701179	0.13689908261377	.	.	0.0456866712639162	0.121498218303214
TGCT	CAediting_256616	chr3_10151127_+	0.041777119791372	0.218766405740616	.	.	.	.
BLCA	CAediting_256617	chr3_10151132_+	7.3847828337257e-05	0.284954886423397	0.0479680250926151	0.14444112739029	.	.
LGG	CAediting_256617	chr3_10151132_+	0.0073441719221566	0.169174030668347	.	.	.	.
BRCA	CAediting_256617	chr3_10151132_+	1.88745129737175e-16	0.286872456108158	.	.	.	.
LIHC	CAediting_256617	chr3_10151132_+	0.000345788124379766	0.321312876686882	.	.	.	.
CESC	CAediting_256617	chr3_10151132_+	0.000280641212427344	0.296394966474965	.	.	.	.
LUAD	CAediting_256617	chr3_10151132_+	0.00189314939807302	0.225743865499686	.	.	.	.
GBM	CAediting_256617	chr3_10151132_+	0.000524051223653614	0.308211047481357	.	.	.	.
PRAD	CAediting_256617	chr3_10151132_+	7.91192424672993e-05	0.227746038326385	.	.	.	.
STAD	CAediting_256617	chr3_10151132_+	1.57297682722525e-05	0.233873966483467	.	.	.	.
THCA	CAediting_256617	chr3_10151132_+	0.0347851717286386	0.123796696350927	.	.	.	.
UCEC	CAediting_256617	chr3_10151132_+	7.34422754462696e-05	0.208554866415547	.	.	.	.
KIRP	CAediting_256617	chr3_10151132_+	0.0251282522683381	0.26384100935634	.	.	.	.
ESCA	CAediting_256617	chr3_10151132_+	0.00012964340150834	0.301672291992051	.	.	.	.
OV	CAediting_256617	chr3_10151132_+	0.000347967909815153	0.20154217212035	.	.	.	.
PCPG	CAediting_256617	chr3_10151132_+	0.000995492657792144	0.385087526975213	.	.	.	.
SKCM	CAediting_256617	chr3_10151132_+	0.00230151892467099	0.225219285251025	.	.	.	.
TGCT	CAediting_256617	chr3_10151132_+	0.00161481755236591	0.295907474456292	.	.	.	.
BLCA	CAediting_256620	chr3_10151154_+	.	.	.	.	0.00960050833515898	0.329116813214757
BRCA	CAediting_256620	chr3_10151154_+	2.88144111114974e-06	0.260926416471129	.	.	.	.
CESC	CAediting_256620	chr3_10151154_+	.	.	0.00222684590925156	0.418744345204866	.	.
LUAD	CAediting_256620	chr3_10151154_+	0.0289824369055345	0.236982063115026	.	.	.	.
LUSC	CAediting_256620	chr3_10151154_+	0.0470848675353695	0.264151213642264	.	.	.	.
HNSC	CAediting_256620	chr3_10151154_+	.	.	0.00139260411949399	0.409988128489288	.	.
BLCA	CAediting_256624	chr3_10151674_+	1.01660328205519e-08	0.394912009834768	.	.	.	.
BRCA	CAediting_256624	chr3_10151674_+	2.02273975058323e-47	0.512231732300931	.	.	.	.
LIHC	CAediting_256624	chr3_10151674_+	1.68316779342079e-10	0.382121202588288	.	.	.	.
CESC	CAediting_256624	chr3_10151674_+	0.00058774901741592	0.272171664685325	.	.	.	.
LUAD	CAediting_256624	chr3_10151674_+	1.46997840262124e-14	0.404766598751092	.	.	.	.
COAD	CAediting_256624	chr3_10151674_+	0.043764068050225	0.247150780319971	.	.	.	.
LUSC	CAediting_256624	chr3_10151674_+	7.7303701415855e-11	0.409565857293281	.	.	.	.
PRAD	CAediting_256624	chr3_10151674_+	2.35448170695167e-05	0.453860865365879	.	.	.	.
HNSC	CAediting_256624	chr3_10151674_+	1.10965413777097e-06	0.290823565898994	.	.	.	.
STAD	CAediting_256624	chr3_10151674_+	1.6305752278163e-06	0.338827047888424	.	.	.	.
UCEC	CAediting_256624	chr3_10151674_+	5.22741471539438e-07	0.360824539176885	.	.	.	.
OV	CAediting_256624	chr3_10151674_+	1.25769346359636e-16	0.456284653390865	.	.	.	.
PAAD	CAediting_256624	chr3_10151674_+	0.00867425024232726	0.311466801130913	.	.	.	.
SKCM	CAediting_256624	chr3_10151674_+	1.86824523181108e-08	0.40398157281565	.	.	.	.
MESO	CAediting_256624	chr3_10151674_+	0.00428310022973045	0.386232179766252	.	.	.	.
SARC	CAediting_256624	chr3_10151674_+	3.89224304382128e-08	0.428980361178471	.	.	.	.
TGCT	CAediting_256624	chr3_10151674_+	2.58340103297671e-15	0.668767202527088	.	.	.	.
UCEC	CAediting_256627	chr3_10151827_+	.	.	0.00259580077373136	0.362202073533663	0.00274980391055485	0.360236693965475
LGG	CAediting_256651	chr3_10152048_+	0.00327380406550979	0.15633562122375	.	.	.	.
BRCA	CAediting_256651	chr3_10152048_+	4.51416629143294e-13	0.25467356442435	.	.	.	.
LIHC	CAediting_256651	chr3_10152048_+	.	.	.	.	0.0234234326868293	0.168425962187684
LUAD	CAediting_256651	chr3_10152048_+	1.84981432908207e-05	0.244895559004178	.	.	.	.
LUSC	CAediting_256651	chr3_10152048_+	0.00484105241347468	0.174564423888621	.	.	.	.
GBM	CAediting_256651	chr3_10152048_+	2.03555886759296e-06	0.4147690862066	.	.	.	.
PRAD	CAediting_256651	chr3_10152048_+	0.00396813711005867	0.16396406039963	.	.	.	.
STAD	CAediting_256651	chr3_10152048_+	0.000272638560268529	0.242561630160731	.	.	.	.
ESCA	CAediting_256651	chr3_10152048_+	.	.	0.0197601561128797	0.224036151568551	.	.
OV	CAediting_256651	chr3_10152048_+	0.00254982381165054	0.172188608689979	.	.	.	.
SARC	CAediting_256651	chr3_10152048_+	0.00365912611222329	0.216756110270188	.	.	.	.
TGCT	CAediting_256651	chr3_10152048_+	0.0339942132082126	0.199653241376618	.	.	.	.
LIHC	CAediting_256662	chr3_10152104_+	.	.	.	.	0.0327054050902098	0.176271125524542
SARC	CAediting_256662	chr3_10152104_+	.	.	.	.	0.022092053293748	0.310973690989898
BLCA	CAediting_256663	chr3_10152112_+	0.0258220232752067	0.197778500190861	.	.	.	.
BRCA	CAediting_256663	chr3_10152112_+	7.37900066186692e-09	0.248041670374585	.	.	.	.
LIHC	CAediting_256663	chr3_10152112_+	.	.	.	.	0.00605099438757111	0.180886141186095
LUAD	CAediting_256663	chr3_10152112_+	0.00509477784650784	0.198331402477243	.	.	.	.
STAD	CAediting_256663	chr3_10152112_+	0.00421266873580445	0.217809755267001	.	.	.	.
SARC	CAediting_256663	chr3_10152112_+	0.00249546321519812	0.355917855203812	.	.	.	.
TGCT	CAediting_256663	chr3_10152112_+	0.0128368977678042	0.282385873406391	.	.	.	.
BLCA	CAediting_256664	chr3_10152113_+	0.0105139728810673	0.232772522617031	.	.	.	.
BRCA	CAediting_256664	chr3_10152113_+	1.5231871576955e-09	0.274067627011142	.	.	.	.
LIHC	CAediting_256664	chr3_10152113_+	0.0459477406507468	0.145370664090692	.	.	.	.
PRAD	CAediting_256664	chr3_10152113_+	0.0082831138485938	0.346487615331966	.	.	.	.
STAD	CAediting_256664	chr3_10152113_+	7.20939724315733e-06	0.360659956022697	.	.	.	.
UCEC	CAediting_256664	chr3_10152113_+	0.0198376558560387	0.202568601910498	.	.	.	.
OV	CAediting_256664	chr3_10152113_+	0.0164134644073906	0.17344867198096	.	.	.	.
SKCM	CAediting_256664	chr3_10152113_+	.	.	.	.	0.00856258186216018	0.295763891465743
SARC	CAediting_256664	chr3_10152113_+	0.00490052344558777	0.311591332190537	.	.	.	.
UCEC	CAediting_256667	chr3_10152143_+	0.0266528351285608	0.222794719150477	6.21343734198894e-05	0.391273592908838	0.00106444182686489	0.324128969953501
ESCA	CAediting_256667	chr3_10152143_+	.	.	0.0210342376811038	0.203798487741481	.	.
OV	CAediting_256667	chr3_10152143_+	0.0483477427439572	0.111691455752571	.	.	.	.
HNSC	CAediting_256678	chr3_10152190_+	.	.	0.0431176140091843	0.287240617619263	.	.
THCA	CAediting_256678	chr3_10152190_+	0.0282933064728649	0.262252339259225	.	.	.	.
BRCA	CAediting_256690	chr3_10152216_+	0.00212405752544071	0.277827525618596	.	.	.	.

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Relation with cancer stages for VHL

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BLCA	pathologic_stage	CAediting_256607	chr3_10151063_+	0.0314440712186121	0.113417449683126
BLCA	pathologic_stage	CAediting_256617	chr3_10151132_+	0.0165167730422984	0.175124617883434
BLCA	pathologic_stage	CAediting_256664	chr3_10152113_+	0.0294881550538653	0.198815427113666
BRCA	pathologic_stage	CAediting_256586	chr3_10150924_+	0.0413501617151707	0.070827289193962
BRCA	pathologic_stage	CAediting_256616	chr3_10151127_+	0.00237727376494724	0.124554475643691
ESCA	clinical_stage	CAediting_256583	chr3_10150912_+	0.0240216679037114	0.479251721983772
ESCA	clinical_stage	CAediting_256616	chr3_10151127_+	0.00694531405215755	-0.384655884108598
ESCA	clinical_stage	CAediting_256617	chr3_10151132_+	0.0376665473531863	-0.289073063275219
ESCA	clinical_stage	CAediting_256620	chr3_10151154_+	0.0469873543554886	0.487810028482838
ESCA	pathologic_stage	CAediting_256598	chr3_10151010_+	0.0471738231543129	-0.194167159876483
HNSC	clinical_stage	CAediting_256606	chr3_10151060_+	0.00154713901884455	-0.219209278970759
HNSC	pathologic_stage	CAediting_256598	chr3_10151010_+	0.0158509107390347	0.173901908036363
KICH	pathologic_stage	CAediting_256607	chr3_10151063_+	0.0324396198825187	0.288871367181011
KIRC	pathologic_stage	CAediting_256586	chr3_10150924_+	0.039363110170094	0.150015945215248
KIRC	pathologic_stage	CAediting_256607	chr3_10151063_+	0.0277562786365458	0.130835117546394
KIRC	pathologic_stage	CAediting_256609	chr3_10151069_+	0.00173962694310483	0.222289575078131
KIRC	pathologic_stage	CAediting_256616	chr3_10151127_+	0.0213274869926817	0.26374979558544
KIRP	clinical_stage	CAediting_256607	chr3_10151063_+	0.0253931364186978	0.189590526404926
KIRP	clinical_stage	CAediting_256651	chr3_10152048_+	0.0173972168722808	0.301113763303228
KIRP	pathologic_stage	CAediting_256607	chr3_10151063_+	0.00847425656049747	0.191496565214424
LIHC	pathologic_stage	CAediting_256606	chr3_10151060_+	0.0400838229553965	0.191746987653204
LUAD	pathologic_stage	CAediting_256583	chr3_10150912_+	0.00500822590661334	0.233487942397683
LUAD	pathologic_stage	CAediting_256598	chr3_10151010_+	0.0174860223780068	0.165430675924814
LUSC	pathologic_stage	CAediting_256609	chr3_10151069_+	0.0193197288553206	0.131962998429001
OV	clinical_stage	CAediting_256651	chr3_10152048_+	0.0497514017738811	-0.113012595385677
PAAD	pathologic_stage	CAediting_256616	chr3_10151127_+	0.00555029703436191	0.307350768945858
STAD	pathologic_stage	CAediting_256609	chr3_10151069_+	0.0382418193106529	0.116269660882908
STAD	pathologic_stage	CAediting_256663	chr3_10152112_+	0.00521727974584831	0.216518684032255
STAD	pathologic_stage	CAediting_256664	chr3_10152113_+	0.029854654434757	0.182351963324346
TGCT	pathologic_stage	CAediting_256607	chr3_10151063_+	0.0258037517940446	-0.270282653949998
TGCT	pathologic_stage	CAediting_256624	chr3_10151674_+	0.0212331576719225	-0.307300407571264
THCA	pathologic_stage	CAediting_256606	chr3_10151060_+	0.0188330861742411	0.158982948786051
THCA	pathologic_stage	CAediting_256609	chr3_10151069_+	0.0315572764961247	0.108754365007017
THCA	pathologic_stage	CAediting_256617	chr3_10151132_+	0.0347224297736442	0.124917980471927
THCA	pathologic_stage	CAediting_256663	chr3_10152112_+	0.0116915100756702	0.285980711036792
THCA	pathologic_stage	CAediting_256664	chr3_10152113_+	0.0262900328801237	0.239598283343535
UCEC	clinical_stage	CAediting_256587	chr3_10150933_+	0.0425145339997576	0.14542204183994
UCEC	clinical_stage	CAediting_256591	chr3_10150958_+	0.00585098737157391	0.196196371543564
UCEC	clinical_stage	CAediting_256620	chr3_10151154_+	0.0207646042924264	0.217326753222364

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Relation with survival for VHL

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
LGG	CAediting_256616	chr3_10151127_+	0.000200829466594277	0.0151592	229
LUAD	CAediting_256600	chr3_10151022_+	0.0139792515819223	0.0367659	1.41341e-07
COAD	CAediting_256607	chr3_10151063_+	0.0405060921347949	0.00617419	19.2543
STAD	CAediting_256586	chr3_10150924_+	0.0391242741109663	0.0109606	6.37146
UCEC	CAediting_256600	chr3_10151022_+	0.0109732862696015	0.044407	2.36091e+14
ESCA	CAediting_256606	chr3_10151060_+	0.00363371020721137	0.0190537	77.6792
ESCA	CAediting_256619	chr3_10151142_+	0.0321866913699655	0.0210917	1745460
READ	CAediting_256607	chr3_10151063_+	0.00567538921207511	0.0422146	0.000223913

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RelatedDrugs for VHL

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for VHL

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
VHL	C0019562	Von Hippel-Lindau Syndrome	19	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
VHL	C1708353	Hereditary Paraganglioma-Pheochromocytoma Syndrome	12	CLINGEN
VHL	C0279702	Conventional (Clear Cell) Renal Cell Carcinoma	11	CGI;CTD_human;GENOMICS_ENGLAND;UNIPROT
VHL	C0007134	Renal Cell Carcinoma	10	CTD_human;GENOMICS_ENGLAND
VHL	C1266042	Chromophobe Renal Cell Carcinoma	9	CTD_human
VHL	C1266043	Sarcomatoid Renal Cell Carcinoma	9	CTD_human
VHL	C1266044	Collecting Duct Carcinoma of the Kidney	9	CTD_human
VHL	C1306837	Papillary Renal Cell Carcinoma	9	CTD_human
VHL	C0031511	Pheochromocytoma	5	CGI;CTD_human;GENOMICS_ENGLAND;UNIPROT
VHL	C1837915	ERYTHROCYTOSIS, FAMILIAL, 2	5	CTD_human;GENOMICS_ENGLAND;ORPHANET;UNIPROT
VHL	C0001430	Adenoma	1	CTD_human
VHL	C0007097	Carcinoma	1	CTD_human
VHL	C0022665	Kidney Neoplasm	1	CGI;CTD_human
VHL	C0024121	Lung Neoplasms	1	CTD_human
VHL	C0027708	Nephroblastoma	1	CTD_human
VHL	C0030421	Paraganglioma	1	GENOMICS_ENGLAND
VHL	C0032461	Polycythemia	1	GENOMICS_ENGLAND
VHL	C0040053	Thrombosis	1	GENOMICS_ENGLAND
VHL	C0042345	Varicosity	1	GENOMICS_ENGLAND
VHL	C0205646	Adenoma, Basal Cell	1	CTD_human
VHL	C0205647	Follicular adenoma	1	CTD_human
VHL	C0205648	Adenoma, Microcystic	1	CTD_human
VHL	C0205649	Adenoma, Monomorphic	1	CTD_human
VHL	C0205650	Papillary adenoma	1	CTD_human
VHL	C0205651	Adenoma, Trabecular	1	CTD_human
VHL	C0205696	Anaplastic carcinoma	1	CTD_human
VHL	C0205697	Carcinoma, Spindle-Cell	1	CTD_human
VHL	C0205698	Undifferentiated carcinoma	1	CTD_human
VHL	C0205699	Carcinomatosis	1	CTD_human
VHL	C0242379	Malignant neoplasm of lung	1	CTD_human;UNIPROT
VHL	C0346647	Malignant neoplasm of pancreas	1	GENOMICS_ENGLAND
VHL	C0431718	Multiple renal cysts	1	GENOMICS_ENGLAND
VHL	C0740457	Malignant neoplasm of kidney	1	CGI;CTD_human;GENOMICS_ENGLAND
VHL	C1257877	Pheochromocytoma, Extra-Adrenal	1	CTD_human
VHL	C1332243	Adenocarcinoma of ampulla of Vater	1	GENOMICS_ENGLAND
VHL	C1527405	Erythrocytosis	1	GENOMICS_ENGLAND
VHL	C1860392	Renal hemangioblastoma	1	GENOMICS_ENGLAND
VHL	C2930471	Bilateral Wilms Tumor	1	CTD_human
VHL	C2973725	Pulmonary arterial hypertension	1	GENOMICS_ENGLAND
VHL	C3203102	Idiopathic pulmonary arterial hypertension	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene