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Editing gene: RRN3P1 (CAeditome ID:730092)

Gene summary for RRN3P1

Gene summary

Gene information	Gene symbol	RRN3P1
	Gene ID	730092
	Gene name	RRN3 pseudogene 1
	Synonyms	-
	Cytomap	16p12.2
	Type of gene	pseudo
	Description	RNA polymerase I transcription factor homolog pseudogene 1RRN3 RNA polymerase I transcription factor homolog pseudogeneRRN3 homolog, RNA polymerase I transcription factor pseudogene 1
	Modification date	20210518
	UniProtAcc	.
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene

GO ID

GO term

PubMed ID

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RNA A-to-I events for RRN3P1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000248124.6

RNA A-to-I editing events in Cancer.

CAediting_1099264(21796262, -), CAediting_1099265(21796275, -), CAediting_1099266(21796291, -), CAediting_1099267(21796313, -), CAediting_1099268(21796329, -), CAediting_1099269(21796330, -), CAediting_1099270(21796338, -), CAediting_1099271(21796354, -), CAediting_1099272(21796356, -), CAediting_1099273(21796361, -), CAediting_1099274(21796370, -), CAediting_1099275(21796378, -), CAediting_1099276(21796409, -), CAediting_1099277(21796415, -), CAediting_1099278(21796416, -), CAediting_1099279(21797429, -), CAediting_1099280(21797433, -), CAediting_1099281(21797461, -), CAediting_1099282(21797475, -), CAediting_1099283(21797540, -), CAediting_1099284(21803318, -), CAediting_1099285(21803358, -), CAediting_1099286(21803719, -), CAediting_1099287(21803734, -), CAediting_1099288(21803866, -), CAediting_1099289(21805161, -), CAediting_1099290(21805782, -), CAediting_1099291(21805834, -), CAediting_1099292(21805835, -), CAediting_1099293(21805857, -), CAediting_1099294(21805861, -), CAediting_1099295(21805905, -), CAediting_1099296(21805919, -), CAediting_1099297(21806597, -), CAediting_1099298(21806603, -), CAediting_1099299(21806641, -), CAediting_1099300(21806645, -), CAediting_1099301(21806666, -), CAediting_1099302(21806683, -), CAediting_1099303(21806689, -), CAediting_1099304(21806693, -), CAediting_1099305(21806696, -), CAediting_1099306(21806712, -), CAediting_1099307(21806764, -), CAediting_1099308(21806766, -), CAediting_1099309(21806784, -), CAediting_1099310(21806820, -), CAediting_1099311(21806828, -), CAediting_1099312(21806829, -), CAediting_1099313(21808590, -), CAediting_1099314(21808614, -), CAediting_1099315(21808625, -), CAediting_1099316(21808699, -), CAediting_1099317(21808708, -), CAediting_1099318(21808725, -), CAediting_1099319(21808756, -), CAediting_1099320(21809289, -), CAediting_1099321(21809312, -), CAediting_1099322(21809327, -), CAediting_1099323(21809347, -), CAediting_1099324(21809352, -), CAediting_1099325(21809359, -), CAediting_1099326(21809877, -), CAediting_1099327(21809878, -), CAediting_1099328(21809884, -), CAediting_1099329(21809928, -), CAediting_1099330(21809946, -), CAediting_1099331(21809947, -), CAediting_1099332(21809955, -), CAediting_1099333(21809961, -), CAediting_1099334(21809965, -), CAediting_1099335(21809987, -), CAediting_1099336(21810014, -), CAediting_1099337(21810017, -), CAediting_1099338(21810022, -), CAediting_1099339(21810024, -), CAediting_1099340(21810026, -), CAediting_1099341(21810027, -), CAediting_1099342(21810031, -), CAediting_1099343(21810042, -), CAediting_1099344(21810043, -), CAediting_1099345(21810050, -), CAediting_1099346(21810113, -), CAediting_1099347(21810116, -), CAediting_1099348(21810121, -), CAediting_1099349(21810122, -), CAediting_1099350(21810128, -), CAediting_1099351(21810130, -), CAediting_1099352(21810940, -), CAediting_1099353(21810942, -), CAediting_1099354(21810969, -), CAediting_1099355(21810982, -), CAediting_1099356(21811075, -), CAediting_1099357(21811099, -), CAediting_1099358(21811123, -), CAediting_1099359(21811163, -), CAediting_1099360(21811193, -), CAediting_1099361(21811195, -), CAediting_1099362(21811707, -), CAediting_1099363(21811708, -), CAediting_1099364(21811732, -), CAediting_1099365(21811736, -), CAediting_1099366(21811743, -), CAediting_1099367(21819215, -), CAediting_1099368(21819217, -), CAediting_1099369(21819228, -), CAediting_1099370(21819232, -), CAediting_1099371(21819239, -), CAediting_1099372(21819263, -), CAediting_1099373(21819279, -), CAediting_1099374(21819283, -), CAediting_1099375(21819292, -), CAediting_1099376(21819293, -), CAediting_1099377(21819330, -), CAediting_1099378(21819331, -), CAediting_1099379(21819385, -), CAediting_1099380(21819391, -), CAediting_1099381(21819418, -), CAediting_1099382(21819421, -), CAediting_1099383(21819427, -),

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RNA editing positional annotations for RRN3P1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1099264	chr16_21796262_-	ncRNA_exonic
CAediting_1099265	chr16_21796275_-	ncRNA_exonic
CAediting_1099266	chr16_21796291_-	ncRNA_exonic
CAediting_1099267	chr16_21796313_-	ncRNA_exonic
CAediting_1099268	chr16_21796329_-	ncRNA_exonic
CAediting_1099269	chr16_21796330_-	ncRNA_exonic
CAediting_1099270	chr16_21796338_-	ncRNA_exonic
CAediting_1099271	chr16_21796354_-	ncRNA_exonic
CAediting_1099272	chr16_21796356_-	ncRNA_exonic
CAediting_1099273	chr16_21796361_-	ncRNA_exonic
CAediting_1099274	chr16_21796370_-	ncRNA_exonic
CAediting_1099275	chr16_21796378_-	ncRNA_exonic
CAediting_1099276	chr16_21796409_-	ncRNA_exonic
CAediting_1099277	chr16_21796415_-	ncRNA_exonic
CAediting_1099278	chr16_21796416_-	ncRNA_exonic
CAediting_1099279	chr16_21797429_-	ncRNA_intronic
CAediting_1099280	chr16_21797433_-	ncRNA_intronic
CAediting_1099281	chr16_21797461_-	ncRNA_intronic
CAediting_1099282	chr16_21797475_-	ncRNA_intronic
CAediting_1099283	chr16_21797540_-	ncRNA_intronic
CAediting_1099284	chr16_21803318_-	ncRNA_intronic
CAediting_1099285	chr16_21803358_-	ncRNA_intronic
CAediting_1099286	chr16_21803719_-	ncRNA_intronic
CAediting_1099287	chr16_21803734_-	ncRNA_intronic
CAediting_1099288	chr16_21803866_-	ncRNA_intronic
CAediting_1099289	chr16_21805161_-	ncRNA_intronic
CAediting_1099290	chr16_21805782_-	ncRNA_intronic
CAediting_1099291	chr16_21805834_-	ncRNA_intronic
CAediting_1099292	chr16_21805835_-	ncRNA_intronic
CAediting_1099293	chr16_21805857_-	ncRNA_intronic
CAediting_1099294	chr16_21805861_-	ncRNA_intronic
CAediting_1099295	chr16_21805905_-	ncRNA_intronic
CAediting_1099296	chr16_21805919_-	ncRNA_intronic
CAediting_1099297	chr16_21806597_-	ncRNA_exonic
CAediting_1099298	chr16_21806603_-	ncRNA_exonic
CAediting_1099299	chr16_21806641_-	ncRNA_exonic
CAediting_1099300	chr16_21806645_-	ncRNA_exonic
CAediting_1099301	chr16_21806666_-	ncRNA_exonic
CAediting_1099302	chr16_21806683_-	ncRNA_exonic
CAediting_1099303	chr16_21806689_-	ncRNA_exonic
CAediting_1099304	chr16_21806693_-	ncRNA_exonic
CAediting_1099305	chr16_21806696_-	ncRNA_exonic
CAediting_1099306	chr16_21806712_-	ncRNA_exonic
CAediting_1099307	chr16_21806764_-	ncRNA_exonic
CAediting_1099308	chr16_21806766_-	ncRNA_exonic
CAediting_1099309	chr16_21806784_-	ncRNA_exonic
CAediting_1099310	chr16_21806820_-	ncRNA_exonic
CAediting_1099311	chr16_21806828_-	ncRNA_exonic
CAediting_1099312	chr16_21806829_-	ncRNA_exonic
CAediting_1099313	chr16_21808590_-	ncRNA_exonic
CAediting_1099314	chr16_21808614_-	ncRNA_exonic
CAediting_1099315	chr16_21808625_-	ncRNA_exonic
CAediting_1099316	chr16_21808699_-	ncRNA_exonic
CAediting_1099317	chr16_21808708_-	ncRNA_exonic
CAediting_1099318	chr16_21808725_-	ncRNA_exonic
CAediting_1099319	chr16_21808756_-	ncRNA_exonic
CAediting_1099320	chr16_21809289_-	ncRNA_intronic
CAediting_1099321	chr16_21809312_-	ncRNA_intronic
CAediting_1099322	chr16_21809327_-	ncRNA_intronic
CAediting_1099323	chr16_21809347_-	ncRNA_intronic
CAediting_1099324	chr16_21809352_-	ncRNA_intronic
CAediting_1099325	chr16_21809359_-	ncRNA_intronic
CAediting_1099326	chr16_21809877_-	ncRNA_intronic
CAediting_1099327	chr16_21809878_-	ncRNA_intronic
CAediting_1099328	chr16_21809884_-	ncRNA_intronic
CAediting_1099329	chr16_21809928_-	ncRNA_intronic
CAediting_1099330	chr16_21809946_-	ncRNA_intronic
CAediting_1099331	chr16_21809947_-	ncRNA_intronic
CAediting_1099332	chr16_21809955_-	ncRNA_intronic
CAediting_1099333	chr16_21809961_-	ncRNA_intronic
CAediting_1099334	chr16_21809965_-	ncRNA_intronic
CAediting_1099335	chr16_21809987_-	ncRNA_intronic
CAediting_1099336	chr16_21810014_-	ncRNA_intronic
CAediting_1099337	chr16_21810017_-	ncRNA_intronic
CAediting_1099338	chr16_21810022_-	ncRNA_intronic
CAediting_1099339	chr16_21810024_-	ncRNA_intronic
CAediting_1099340	chr16_21810026_-	ncRNA_intronic
CAediting_1099341	chr16_21810027_-	ncRNA_intronic
CAediting_1099342	chr16_21810031_-	ncRNA_intronic
CAediting_1099343	chr16_21810042_-	ncRNA_intronic
CAediting_1099344	chr16_21810043_-	ncRNA_intronic
CAediting_1099345	chr16_21810050_-	ncRNA_intronic
CAediting_1099346	chr16_21810113_-	ncRNA_intronic
CAediting_1099347	chr16_21810116_-	ncRNA_intronic
CAediting_1099348	chr16_21810121_-	ncRNA_intronic
CAediting_1099349	chr16_21810122_-	ncRNA_intronic
CAediting_1099350	chr16_21810128_-	ncRNA_intronic
CAediting_1099351	chr16_21810130_-	ncRNA_intronic
CAediting_1099352	chr16_21810940_-	ncRNA_intronic
CAediting_1099353	chr16_21810942_-	ncRNA_intronic
CAediting_1099354	chr16_21810969_-	ncRNA_intronic
CAediting_1099355	chr16_21810982_-	ncRNA_intronic
CAediting_1099356	chr16_21811075_-	ncRNA_intronic
CAediting_1099357	chr16_21811099_-	ncRNA_intronic
CAediting_1099358	chr16_21811123_-	ncRNA_intronic
CAediting_1099359	chr16_21811163_-	ncRNA_intronic
CAediting_1099360	chr16_21811193_-	ncRNA_intronic
CAediting_1099361	chr16_21811195_-	ncRNA_intronic
CAediting_1099362	chr16_21811707_-	ncRNA_intronic
CAediting_1099363	chr16_21811708_-	ncRNA_intronic
CAediting_1099364	chr16_21811732_-	ncRNA_intronic
CAediting_1099365	chr16_21811736_-	ncRNA_intronic
CAediting_1099366	chr16_21811743_-	ncRNA_intronic
CAediting_1099367	chr16_21819215_-	ncRNA_intronic
CAediting_1099368	chr16_21819217_-	ncRNA_intronic
CAediting_1099369	chr16_21819228_-	ncRNA_intronic
CAediting_1099370	chr16_21819232_-	ncRNA_intronic
CAediting_1099371	chr16_21819239_-	ncRNA_intronic
CAediting_1099372	chr16_21819263_-	ncRNA_intronic
CAediting_1099373	chr16_21819279_-	ncRNA_intronic
CAediting_1099374	chr16_21819283_-	ncRNA_intronic
CAediting_1099375	chr16_21819292_-	ncRNA_intronic
CAediting_1099376	chr16_21819293_-	ncRNA_intronic
CAediting_1099377	chr16_21819330_-	ncRNA_exonic
CAediting_1099378	chr16_21819331_-	ncRNA_exonic
CAediting_1099379	chr16_21819385_-	ncRNA_exonic
CAediting_1099380	chr16_21819391_-	ncRNA_exonic
CAediting_1099381	chr16_21819418_-	ncRNA_exonic
CAediting_1099382	chr16_21819421_-	ncRNA_exonic
CAediting_1099383	chr16_21819427_-	ncRNA_exonic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1099264	chr16_21796262_-	SINE	Alu	AluSq
CAediting_1099265	chr16_21796275_-	SINE	Alu	AluSq
CAediting_1099266	chr16_21796291_-	SINE	Alu	AluSq
CAediting_1099267	chr16_21796313_-	SINE	Alu	AluSq
CAediting_1099268	chr16_21796329_-	SINE	Alu	AluSq
CAediting_1099269	chr16_21796330_-	SINE	Alu	AluSq
CAediting_1099270	chr16_21796338_-	SINE	Alu	AluSq
CAediting_1099271	chr16_21796354_-	SINE	Alu	AluSq
CAediting_1099272	chr16_21796356_-	SINE	Alu	AluSq
CAediting_1099273	chr16_21796361_-	SINE	Alu	AluSq
CAediting_1099274	chr16_21796370_-	SINE	Alu	AluSq
CAediting_1099275	chr16_21796378_-	SINE	Alu	AluSq
CAediting_1099276	chr16_21796409_-	SINE	Alu	AluSq
CAediting_1099277	chr16_21796415_-	SINE	Alu	AluSq
CAediting_1099278	chr16_21796416_-	SINE	Alu	AluSq
CAediting_1099279	chr16_21797429_-	SINE	Alu	AluSq2
CAediting_1099280	chr16_21797433_-	SINE	Alu	AluSq2
CAediting_1099281	chr16_21797461_-	SINE	Alu	AluSq2
CAediting_1099282	chr16_21797475_-	SINE	Alu	AluSq2
CAediting_1099283	chr16_21797540_-	SINE	Alu	AluSq2
CAediting_1099284	chr16_21803318_-	SINE	Alu	AluSp
CAediting_1099285	chr16_21803358_-	SINE	Alu	AluSp
CAediting_1099286	chr16_21803719_-	SINE	Alu	AluSc8
CAediting_1099287	chr16_21803734_-	SINE	Alu	AluSc8
CAediting_1099288	chr16_21803866_-	SINE	Alu	AluSc8
CAediting_1099289	chr16_21805161_-	SINE	Alu	AluY
CAediting_1099290	chr16_21805782_-	SINE	Alu	AluSx1
CAediting_1099291	chr16_21805834_-	SINE	Alu	AluSx1
CAediting_1099292	chr16_21805835_-	SINE	Alu	AluSx1
CAediting_1099293	chr16_21805857_-	SINE	Alu	AluSx1
CAediting_1099294	chr16_21805861_-	SINE	Alu	AluSx1
CAediting_1099295	chr16_21805905_-	SINE	Alu	AluSx1
CAediting_1099296	chr16_21805919_-	SINE	Alu	AluSx1
CAediting_1099297	chr16_21806597_-	SINE	Alu	AluJr
CAediting_1099298	chr16_21806603_-	SINE	Alu	AluJr
CAediting_1099299	chr16_21806641_-	SINE	Alu	AluJr
CAediting_1099300	chr16_21806645_-	SINE	Alu	AluJr
CAediting_1099301	chr16_21806666_-	SINE	Alu	AluJr
CAediting_1099302	chr16_21806683_-	SINE	Alu	AluJr
CAediting_1099303	chr16_21806689_-	SINE	Alu	AluJr
CAediting_1099304	chr16_21806693_-	SINE	Alu	AluJr
CAediting_1099305	chr16_21806696_-	SINE	Alu	AluJr
CAediting_1099306	chr16_21806712_-	SINE	Alu	AluJr
CAediting_1099307	chr16_21806764_-	SINE	Alu	AluJr
CAediting_1099308	chr16_21806766_-	SINE	Alu	AluJr
CAediting_1099309	chr16_21806784_-	SINE	Alu	AluJr
CAediting_1099310	chr16_21806820_-	SINE	Alu	AluJr
CAediting_1099311	chr16_21806828_-	SINE	Alu	AluJr
CAediting_1099312	chr16_21806829_-	SINE	Alu	AluJr
CAediting_1099313	chr16_21808590_-	SINE	Alu	AluSz
CAediting_1099314	chr16_21808614_-	SINE	Alu	AluSz
CAediting_1099315	chr16_21808625_-	SINE	Alu	AluSz
CAediting_1099316	chr16_21808699_-	SINE	Alu	AluSz
CAediting_1099317	chr16_21808708_-	SINE	Alu	AluSz
CAediting_1099318	chr16_21808725_-	SINE	Alu	AluSz
CAediting_1099319	chr16_21808756_-	SINE	Alu	AluSz
CAediting_1099320	chr16_21809289_-	SINE	Alu	AluSx4
CAediting_1099321	chr16_21809312_-	SINE	Alu	AluSx4
CAediting_1099322	chr16_21809327_-	SINE	Alu	AluSx4
CAediting_1099323	chr16_21809347_-	SINE	Alu	AluSx4
CAediting_1099324	chr16_21809352_-	SINE	Alu	AluSx4
CAediting_1099325	chr16_21809359_-	SINE	Alu	AluSx4
CAediting_1099326	chr16_21809877_-	SINE	Alu	AluSp
CAediting_1099327	chr16_21809878_-	SINE	Alu	AluSp
CAediting_1099328	chr16_21809884_-	SINE	Alu	AluSp
CAediting_1099329	chr16_21809928_-	SINE	Alu	AluSp
CAediting_1099330	chr16_21809946_-	SINE	Alu	AluSp
CAediting_1099331	chr16_21809947_-	SINE	Alu	AluSp
CAediting_1099332	chr16_21809955_-	SINE	Alu	AluSp
CAediting_1099333	chr16_21809961_-	SINE	Alu	AluSp
CAediting_1099334	chr16_21809965_-	SINE	Alu	AluSp
CAediting_1099335	chr16_21809987_-	SINE	Alu	AluSp
CAediting_1099336	chr16_21810014_-	SINE	Alu	AluSp
CAediting_1099337	chr16_21810017_-	SINE	Alu	AluSp
CAediting_1099338	chr16_21810022_-	SINE	Alu	AluSp
CAediting_1099339	chr16_21810024_-	SINE	Alu	AluSp
CAediting_1099340	chr16_21810026_-	SINE	Alu	AluSp
CAediting_1099341	chr16_21810027_-	SINE	Alu	AluSp
CAediting_1099342	chr16_21810031_-	SINE	Alu	AluSp
CAediting_1099343	chr16_21810042_-	SINE	Alu	AluSp
CAediting_1099344	chr16_21810043_-	SINE	Alu	AluSp
CAediting_1099345	chr16_21810050_-	SINE	Alu	AluSp
CAediting_1099346	chr16_21810113_-	SINE	Alu	AluSp
CAediting_1099347	chr16_21810116_-	SINE	Alu	AluSp
CAediting_1099348	chr16_21810121_-	SINE	Alu	AluSp
CAediting_1099349	chr16_21810122_-	SINE	Alu	AluSp
CAediting_1099350	chr16_21810128_-	SINE	Alu	AluSp
CAediting_1099351	chr16_21810130_-	SINE	Alu	AluSp
CAediting_1099352	chr16_21810940_-	SINE	Alu	AluSx1
CAediting_1099353	chr16_21810942_-	SINE	Alu	AluSx1
CAediting_1099354	chr16_21810969_-	SINE	Alu	AluSx1
CAediting_1099355	chr16_21810982_-	SINE	Alu	AluSx1
CAediting_1099356	chr16_21811075_-	SINE	Alu	AluSx1
CAediting_1099357	chr16_21811099_-	SINE	Alu	AluSx1
CAediting_1099358	chr16_21811123_-	SINE	Alu	AluSx1
CAediting_1099359	chr16_21811163_-	SINE	Alu	AluSx1
CAediting_1099360	chr16_21811193_-	SINE	Alu	AluSx1
CAediting_1099361	chr16_21811195_-	SINE	Alu	AluSx1
CAediting_1099362	chr16_21811707_-	SINE	Alu	AluJr
CAediting_1099363	chr16_21811708_-	SINE	Alu	AluJr
CAediting_1099364	chr16_21811732_-	SINE	Alu	AluJr
CAediting_1099365	chr16_21811736_-	SINE	Alu	AluJr
CAediting_1099366	chr16_21811743_-	SINE	Alu	AluJr
CAediting_1099367	chr16_21819215_-	SINE	Alu	AluSx1
CAediting_1099368	chr16_21819217_-	SINE	Alu	AluSx1
CAediting_1099369	chr16_21819228_-	SINE	Alu	AluSx1
CAediting_1099370	chr16_21819232_-	SINE	Alu	AluSx1
CAediting_1099371	chr16_21819239_-	SINE	Alu	AluSx1
CAediting_1099372	chr16_21819263_-	SINE	Alu	AluSx1
CAediting_1099373	chr16_21819279_-	SINE	Alu	AluSx1
CAediting_1099374	chr16_21819283_-	SINE	Alu	AluSx1
CAediting_1099375	chr16_21819292_-	SINE	Alu	AluSx1
CAediting_1099376	chr16_21819293_-	SINE	Alu	AluSx1
CAediting_1099377	chr16_21819330_-	SINE	Alu	AluSx1
CAediting_1099378	chr16_21819331_-	SINE	Alu	AluSx1
CAediting_1099379	chr16_21819385_-	SINE	Alu	AluSx1
CAediting_1099380	chr16_21819391_-	SINE	Alu	AluSx1
CAediting_1099381	chr16_21819418_-	SINE	Alu	AluSx1
CAediting_1099382	chr16_21819421_-	SINE	Alu	AluSx1
CAediting_1099383	chr16_21819427_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for RRN3P1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000248124.6.RRN3P1.

Correlation between RNA A-to-I editing and PSI for ENSG00000248124.6.RRN3P1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for RRN3P1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for RRN3P1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for RRN3P1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for RRN3P1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for RRN3P1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for RRN3P1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for RRN3P1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for RRN3P1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for RRN3P1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene