Home

Download

Statistics

Examples

Help

Contact

Editing gene: TXNRD1 (CAeditome ID:7296)

Gene summary for TXNRD1

Gene summary

Gene information	Gene symbol	TXNRD1
	Gene ID	7296
	Gene name	thioredoxin reductase 1
	Synonyms	GRIM-12\|TR\|TR1\|TRXR1\|TXNR
	Cytomap	12q23.3
	Type of gene	protein-coding
	Description	thioredoxin reductase 1, cytoplasmicKM-102-derived reductase-like factorgene associated with retinoic and IFN-induced mortality 12 proteingene associated with retinoic and interferon-induced mortality 12 proteinoxidoreductaseselenoprotein TXNRD1test
	Modification date	20210524
	UniProtAcc	Q16881
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TXNRD1	GO:0001650	Thioredoxin reductase 1, cytoplasmic	0000052
TXNRD1	GO:0005654	Thioredoxin reductase 1, cytoplasmic	0000052

Top

RNA A-to-I events for TXNRD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000198431.14

RNA A-to-I editing events in Cancer.

CAediting_919645(104221156, +), CAediting_919646(104221164, +), CAediting_919647(104221183, +), CAediting_919648(104237858, +), CAediting_919649(104238409, +), CAediting_919650(104245330, +), CAediting_919651(104245351, +), CAediting_919652(104245406, +), CAediting_919653(104251943, +), CAediting_919654(104254843, +), CAediting_919655(104254850, +), CAediting_919656(104254943, +), CAediting_919657(104254944, +), CAediting_919658(104254985, +), CAediting_919659(104254998, +), CAediting_919660(104255035, +), CAediting_919661(104259123, +), CAediting_919662(104259338, +), CAediting_919663(104261250, +), CAediting_919664(104289833, +), CAediting_919665(104289850, +), CAediting_919666(104289862, +), CAediting_919667(104290430, +), CAediting_919668(104290436, +), CAediting_919669(104290437, +), CAediting_919670(104290442, +), CAediting_919671(104290517, +), CAediting_919672(104290528, +), CAediting_919673(104290531, +), CAediting_919674(104290537, +), CAediting_919675(104290538, +), CAediting_919676(104290543, +), CAediting_919677(104290546, +), CAediting_919678(104290640, +), CAediting_919679(104290674, +), CAediting_919680(104291018, +), CAediting_919681(104291674, +), CAediting_919682(104291681, +), CAediting_919683(104291684, +), CAediting_919684(104291725, +), CAediting_919685(104291729, +), CAediting_919686(104291743, +), CAediting_919687(104291744, +), CAediting_919688(104292684, +), CAediting_919689(104293482, +), CAediting_919690(104293563, +), CAediting_919691(104293568, +), CAediting_919692(104293578, +), CAediting_919693(104293580, +), CAediting_919694(104293593, +), CAediting_919695(104294718, +), CAediting_919696(104294732, +), CAediting_919697(104294733, +), CAediting_919698(104294740, +), CAediting_919699(104294745, +), CAediting_919700(104296508, +), CAediting_919701(104296509, +), CAediting_919702(104296512, +), CAediting_919703(104297071, +), CAediting_919704(104297094, +), CAediting_919705(104297097, +), CAediting_919706(104297117, +), CAediting_919707(104297118, +), CAediting_919708(104297120, +), CAediting_919709(104297127, +), CAediting_919710(104297139, +), CAediting_919711(104297142, +), CAediting_919712(104297145, +), CAediting_919713(104297146, +), CAediting_919714(104297158, +), CAediting_919715(104297194, +), CAediting_919716(104297198, +), CAediting_919717(104297225, +), CAediting_919718(104297226, +), CAediting_919719(104297387, +), CAediting_919720(104297465, +), CAediting_919721(104297466, +), CAediting_919722(104297469, +), CAediting_919723(104297495, +), CAediting_919724(104297518, +), CAediting_919725(104297548, +), CAediting_919726(104297574, +), CAediting_919727(104297627, +), CAediting_919728(104297639, +), CAediting_919729(104297648, +), CAediting_919730(104298454, +), CAediting_919731(104298470, +), CAediting_919732(104298471, +), CAediting_919733(104298476, +), CAediting_919734(104298479, +), CAediting_919735(104298514, +), CAediting_919736(104298517, +), CAediting_919737(104298540, +), CAediting_919738(104298553, +), CAediting_919739(104298559, +), CAediting_919740(104298562, +), CAediting_919741(104298563, +), CAediting_919742(104298565, +), CAediting_919743(104298571, +), CAediting_919744(104298593, +), CAediting_919745(104298597, +), CAediting_919746(104298603, +), CAediting_919747(104298604, +), CAediting_919748(104298630, +), CAediting_919749(104298636, +), CAediting_919750(104298639, +), CAediting_919751(104298645, +), CAediting_919752(104298679, +), CAediting_919753(104299491, +), CAediting_919754(104299513, +), CAediting_919755(104299549, +), CAediting_919756(104299580, +), CAediting_919757(104299581, +), CAediting_919758(104299583, +), CAediting_919759(104299590, +), CAediting_919760(104299605, +), CAediting_919761(104299611, +), CAediting_919762(104299614, +), CAediting_919763(104299615, +), CAediting_919764(104299617, +), CAediting_919765(104299620, +), CAediting_919766(104299624, +), CAediting_919767(104299646, +), CAediting_919768(104299647, +), CAediting_919769(104299652, +), CAediting_919770(104299673, +), CAediting_919771(104299682, +), CAediting_919772(104299708, +), CAediting_919773(104299712, +), CAediting_919774(104299755, +), CAediting_919775(104300786, +), CAediting_919776(104300802, +), CAediting_919777(104300812, +), CAediting_919778(104300846, +), CAediting_919779(104300848, +), CAediting_919780(104300920, +), CAediting_919781(104302655, +), CAediting_919782(104302696, +), CAediting_919783(104306029, +), CAediting_919784(104306033, +), CAediting_919785(104306109, +), CAediting_919786(104316494, +), CAediting_919787(104316529, +), CAediting_919788(104316588, +), CAediting_919789(104316596, +), CAediting_919790(104317598, +), CAediting_919791(104317658, +), CAediting_919792(104317659, +), CAediting_919793(104317729, +), CAediting_919794(104317739, +), CAediting_919795(104317761, +), CAediting_919796(104317876, +), CAediting_919797(104317884, +), CAediting_919798(104317885, +), CAediting_919799(104317908, +), CAediting_919800(104317954, +), CAediting_919801(104317979, +), CAediting_919802(104317980, +), CAediting_919803(104317981, +), CAediting_919804(104317984, +), CAediting_919805(104317994, +), CAediting_919806(104318020, +), CAediting_919807(104318030, +), CAediting_919808(104318055, +), CAediting_919809(104326519, +), CAediting_919810(104326605, +), CAediting_919811(104327045, +), CAediting_919812(104327887, +), CAediting_919813(104327905, +), CAediting_919814(104327906, +), CAediting_919815(104327949, +), CAediting_919816(104327957, +), CAediting_919817(104327963, +), CAediting_919818(104327972, +), CAediting_919819(104327983, +), CAediting_919820(104327994, +), CAediting_919821(104327997, +), CAediting_919822(104327999, +), CAediting_919823(104328003, +), CAediting_919824(104328012, +), CAediting_919825(104328038, +), CAediting_919826(104328044, +), CAediting_919827(104328048, +), CAediting_919828(104328052, +), CAediting_919829(104328115, +), CAediting_919830(104328479, +), CAediting_919831(104328501, +), CAediting_919832(104328502, +), CAediting_919833(104328550, +), CAediting_919834(104328579, +), CAediting_919835(104328593, +), CAediting_919836(104328605, +), CAediting_919837(104328609, +), CAediting_919838(104328638, +), CAediting_919839(104328665, +), CAediting_919840(104328704, +), CAediting_919841(104329395, +), CAediting_919842(104329442, +), CAediting_919843(104329448, +), CAediting_919844(104329449, +), CAediting_919845(104329472, +), CAediting_919846(104329511, +), CAediting_919847(104329561, +), CAediting_919848(104329564, +), CAediting_919849(104329570, +), CAediting_919850(104329635, +), CAediting_919851(104330617, +), CAediting_919852(104330862, +), CAediting_919853(104334462, +), CAediting_919854(104334482, +), CAediting_919855(104334483, +), CAediting_919856(104334500, +), CAediting_919857(104334508, +), CAediting_919858(104334513, +), CAediting_919859(104334522, +), CAediting_919860(104334524, +), CAediting_919861(104334608, +), CAediting_919862(104334631, +), CAediting_919863(104334663, +), CAediting_919864(104337601, +), CAediting_919865(104337602, +), CAediting_919866(104337641, +), CAediting_919867(104337887, +), CAediting_919868(104337904, +), CAediting_919869(104337926, +), CAediting_919870(104338030, +), CAediting_919871(104338048, +), CAediting_919872(104338431, +), CAediting_919873(104338508, +), CAediting_919874(104338509, +), CAediting_919875(104338517, +), CAediting_919876(104338518, +), CAediting_919877(104338519, +), CAediting_919878(104338563, +), CAediting_919879(104338642, +), CAediting_919880(104338892, +), CAediting_919881(104338898, +), CAediting_919882(104338905, +), CAediting_919883(104338915, +), CAediting_919884(104338923, +), CAediting_919885(104338978, +), CAediting_919886(104346031, +), CAediting_919887(104346036, +), CAediting_919888(104346107, +), CAediting_919889(104346113, +), CAediting_919890(104346142, +), CAediting_919891(104346233, +), CAediting_919892(104346247, +), CAediting_919893(104346248, +), CAediting_919894(104346251, +), CAediting_919895(104346274, +), CAediting_919896(104346275, +), CAediting_919897(104346839, +), CAediting_919898(104346840, +), CAediting_919899(104346845, +), CAediting_919900(104346862, +), CAediting_919901(104346866, +), CAediting_919902(104346875, +), CAediting_919903(104346984, +), CAediting_919904(104347015, +), CAediting_919905(104347016, +), CAediting_919906(104347020, +),

Top

RNA editing positional annotations for TXNRD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_919680	chr12_104291018_+	nonsynonymous SNV	ENST00000531691.4	c.A10G	p.R4G	D	.	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_919645	chr12_104221156_+	intronic
CAediting_919646	chr12_104221164_+	intronic
CAediting_919647	chr12_104221183_+	intronic
CAediting_919648	chr12_104237858_+	ncRNA_intronic
CAediting_919649	chr12_104238409_+	ncRNA_intronic
CAediting_919650	chr12_104245330_+	ncRNA_intronic
CAediting_919651	chr12_104245351_+	ncRNA_intronic
CAediting_919652	chr12_104245406_+	ncRNA_intronic
CAediting_919653	chr12_104251943_+	ncRNA_intronic
CAediting_919654	chr12_104254843_+	ncRNA_intronic
CAediting_919655	chr12_104254850_+	ncRNA_intronic
CAediting_919656	chr12_104254943_+	ncRNA_intronic
CAediting_919657	chr12_104254944_+	ncRNA_intronic
CAediting_919658	chr12_104254985_+	ncRNA_intronic
CAediting_919659	chr12_104254998_+	ncRNA_intronic
CAediting_919660	chr12_104255035_+	ncRNA_intronic
CAediting_919661	chr12_104259123_+	ncRNA_intronic
CAediting_919662	chr12_104259338_+	ncRNA_intronic
CAediting_919663	chr12_104261250_+	ncRNA_intronic
CAediting_919664	chr12_104289833_+	intronic
CAediting_919665	chr12_104289850_+	intronic
CAediting_919666	chr12_104289862_+	intronic
CAediting_919667	chr12_104290430_+	intronic
CAediting_919668	chr12_104290436_+	intronic
CAediting_919669	chr12_104290437_+	intronic
CAediting_919670	chr12_104290442_+	intronic
CAediting_919671	chr12_104290517_+	intronic
CAediting_919672	chr12_104290528_+	intronic
CAediting_919673	chr12_104290531_+	intronic
CAediting_919674	chr12_104290537_+	intronic
CAediting_919675	chr12_104290538_+	intronic
CAediting_919676	chr12_104290543_+	intronic
CAediting_919677	chr12_104290546_+	intronic
CAediting_919678	chr12_104290640_+	intronic
CAediting_919679	chr12_104290674_+	intronic
CAediting_919680	chr12_104291018_+	exonic
CAediting_919681	chr12_104291674_+	intronic
CAediting_919682	chr12_104291681_+	intronic
CAediting_919683	chr12_104291684_+	intronic
CAediting_919684	chr12_104291725_+	intronic
CAediting_919685	chr12_104291729_+	intronic
CAediting_919686	chr12_104291743_+	intronic
CAediting_919687	chr12_104291744_+	intronic
CAediting_919688	chr12_104292684_+	intronic
CAediting_919689	chr12_104293482_+	intronic
CAediting_919690	chr12_104293563_+	intronic
CAediting_919691	chr12_104293568_+	intronic
CAediting_919692	chr12_104293578_+	intronic
CAediting_919693	chr12_104293580_+	intronic
CAediting_919694	chr12_104293593_+	intronic
CAediting_919695	chr12_104294718_+	intronic
CAediting_919696	chr12_104294732_+	intronic
CAediting_919697	chr12_104294733_+	intronic
CAediting_919698	chr12_104294740_+	intronic
CAediting_919699	chr12_104294745_+	intronic
CAediting_919700	chr12_104296508_+	intronic
CAediting_919701	chr12_104296509_+	intronic
CAediting_919702	chr12_104296512_+	intronic
CAediting_919703	chr12_104297071_+	intronic
CAediting_919704	chr12_104297094_+	intronic
CAediting_919705	chr12_104297097_+	intronic
CAediting_919706	chr12_104297117_+	intronic
CAediting_919707	chr12_104297118_+	intronic
CAediting_919708	chr12_104297120_+	intronic
CAediting_919709	chr12_104297127_+	intronic
CAediting_919710	chr12_104297139_+	intronic
CAediting_919711	chr12_104297142_+	intronic
CAediting_919712	chr12_104297145_+	intronic
CAediting_919713	chr12_104297146_+	intronic
CAediting_919714	chr12_104297158_+	intronic
CAediting_919715	chr12_104297194_+	intronic
CAediting_919716	chr12_104297198_+	intronic
CAediting_919717	chr12_104297225_+	intronic
CAediting_919718	chr12_104297226_+	intronic
CAediting_919719	chr12_104297387_+	intronic
CAediting_919720	chr12_104297465_+	intronic
CAediting_919721	chr12_104297466_+	intronic
CAediting_919722	chr12_104297469_+	intronic
CAediting_919723	chr12_104297495_+	intronic
CAediting_919724	chr12_104297518_+	intronic
CAediting_919725	chr12_104297548_+	intronic
CAediting_919726	chr12_104297574_+	intronic
CAediting_919727	chr12_104297627_+	intronic
CAediting_919728	chr12_104297639_+	intronic
CAediting_919729	chr12_104297648_+	intronic
CAediting_919730	chr12_104298454_+	intronic
CAediting_919731	chr12_104298470_+	intronic
CAediting_919732	chr12_104298471_+	intronic
CAediting_919733	chr12_104298476_+	intronic
CAediting_919734	chr12_104298479_+	intronic
CAediting_919735	chr12_104298514_+	intronic
CAediting_919736	chr12_104298517_+	intronic
CAediting_919737	chr12_104298540_+	intronic
CAediting_919738	chr12_104298553_+	intronic
CAediting_919739	chr12_104298559_+	intronic
CAediting_919740	chr12_104298562_+	intronic
CAediting_919741	chr12_104298563_+	intronic
CAediting_919742	chr12_104298565_+	intronic
CAediting_919743	chr12_104298571_+	intronic
CAediting_919744	chr12_104298593_+	intronic
CAediting_919745	chr12_104298597_+	intronic
CAediting_919746	chr12_104298603_+	intronic
CAediting_919747	chr12_104298604_+	intronic
CAediting_919748	chr12_104298630_+	intronic
CAediting_919749	chr12_104298636_+	intronic
CAediting_919750	chr12_104298639_+	intronic
CAediting_919751	chr12_104298645_+	intronic
CAediting_919752	chr12_104298679_+	intronic
CAediting_919753	chr12_104299491_+	intronic
CAediting_919754	chr12_104299513_+	intronic
CAediting_919755	chr12_104299549_+	intronic
CAediting_919756	chr12_104299580_+	intronic
CAediting_919757	chr12_104299581_+	intronic
CAediting_919758	chr12_104299583_+	intronic
CAediting_919759	chr12_104299590_+	intronic
CAediting_919760	chr12_104299605_+	intronic
CAediting_919761	chr12_104299611_+	intronic
CAediting_919762	chr12_104299614_+	intronic
CAediting_919763	chr12_104299615_+	intronic
CAediting_919764	chr12_104299617_+	intronic
CAediting_919765	chr12_104299620_+	intronic
CAediting_919766	chr12_104299624_+	intronic
CAediting_919767	chr12_104299646_+	intronic
CAediting_919768	chr12_104299647_+	intronic
CAediting_919769	chr12_104299652_+	intronic
CAediting_919770	chr12_104299673_+	intronic
CAediting_919771	chr12_104299682_+	intronic
CAediting_919772	chr12_104299708_+	intronic
CAediting_919773	chr12_104299712_+	intronic
CAediting_919774	chr12_104299755_+	intronic
CAediting_919775	chr12_104300786_+	intronic
CAediting_919776	chr12_104300802_+	intronic
CAediting_919777	chr12_104300812_+	intronic
CAediting_919778	chr12_104300846_+	intronic
CAediting_919779	chr12_104300848_+	intronic
CAediting_919780	chr12_104300920_+	intronic
CAediting_919781	chr12_104302655_+	intronic
CAediting_919782	chr12_104302696_+	intronic
CAediting_919783	chr12_104306029_+	intronic
CAediting_919784	chr12_104306033_+	intronic
CAediting_919785	chr12_104306109_+	intronic
CAediting_919786	chr12_104316494_+	intronic
CAediting_919787	chr12_104316529_+	intronic
CAediting_919788	chr12_104316588_+	intronic
CAediting_919789	chr12_104316596_+	intronic
CAediting_919790	chr12_104317598_+	intronic
CAediting_919791	chr12_104317658_+	intronic
CAediting_919792	chr12_104317659_+	intronic
CAediting_919793	chr12_104317729_+	intronic
CAediting_919794	chr12_104317739_+	intronic
CAediting_919795	chr12_104317761_+	intronic
CAediting_919796	chr12_104317876_+	intronic
CAediting_919797	chr12_104317884_+	intronic
CAediting_919798	chr12_104317885_+	intronic
CAediting_919799	chr12_104317908_+	intronic
CAediting_919800	chr12_104317954_+	intronic
CAediting_919801	chr12_104317979_+	intronic
CAediting_919802	chr12_104317980_+	intronic
CAediting_919803	chr12_104317981_+	intronic
CAediting_919804	chr12_104317984_+	intronic
CAediting_919805	chr12_104317994_+	intronic
CAediting_919806	chr12_104318020_+	intronic
CAediting_919807	chr12_104318030_+	intronic
CAediting_919808	chr12_104318055_+	intronic
CAediting_919809	chr12_104326519_+	intronic
CAediting_919810	chr12_104326605_+	intronic
CAediting_919811	chr12_104327045_+	intronic
CAediting_919812	chr12_104327887_+	intronic
CAediting_919813	chr12_104327905_+	intronic
CAediting_919814	chr12_104327906_+	intronic
CAediting_919815	chr12_104327949_+	intronic
CAediting_919816	chr12_104327957_+	intronic
CAediting_919817	chr12_104327963_+	intronic
CAediting_919818	chr12_104327972_+	intronic
CAediting_919819	chr12_104327983_+	intronic
CAediting_919820	chr12_104327994_+	intronic
CAediting_919821	chr12_104327997_+	intronic
CAediting_919822	chr12_104327999_+	intronic
CAediting_919823	chr12_104328003_+	intronic
CAediting_919824	chr12_104328012_+	intronic
CAediting_919825	chr12_104328038_+	intronic
CAediting_919826	chr12_104328044_+	intronic
CAediting_919827	chr12_104328048_+	intronic
CAediting_919828	chr12_104328052_+	intronic
CAediting_919829	chr12_104328115_+	intronic
CAediting_919830	chr12_104328479_+	intronic
CAediting_919831	chr12_104328501_+	intronic
CAediting_919832	chr12_104328502_+	intronic
CAediting_919833	chr12_104328550_+	intronic
CAediting_919834	chr12_104328579_+	intronic
CAediting_919835	chr12_104328593_+	intronic
CAediting_919836	chr12_104328605_+	intronic
CAediting_919837	chr12_104328609_+	intronic
CAediting_919838	chr12_104328638_+	intronic
CAediting_919839	chr12_104328665_+	intronic
CAediting_919840	chr12_104328704_+	intronic
CAediting_919841	chr12_104329395_+	intronic
CAediting_919842	chr12_104329442_+	intronic
CAediting_919843	chr12_104329448_+	intronic
CAediting_919844	chr12_104329449_+	intronic
CAediting_919845	chr12_104329472_+	intronic
CAediting_919846	chr12_104329511_+	intronic
CAediting_919847	chr12_104329561_+	intronic
CAediting_919848	chr12_104329564_+	intronic
CAediting_919849	chr12_104329570_+	intronic
CAediting_919850	chr12_104329635_+	intronic
CAediting_919851	chr12_104330617_+	intronic
CAediting_919852	chr12_104330862_+	intronic
CAediting_919853	chr12_104334462_+	ncRNA_intronic
CAediting_919854	chr12_104334482_+	ncRNA_intronic
CAediting_919855	chr12_104334483_+	ncRNA_intronic
CAediting_919856	chr12_104334500_+	ncRNA_intronic
CAediting_919857	chr12_104334508_+	ncRNA_intronic
CAediting_919858	chr12_104334513_+	ncRNA_intronic
CAediting_919859	chr12_104334522_+	ncRNA_intronic
CAediting_919860	chr12_104334524_+	ncRNA_intronic
CAediting_919861	chr12_104334608_+	ncRNA_intronic
CAediting_919862	chr12_104334631_+	ncRNA_intronic
CAediting_919863	chr12_104334663_+	ncRNA_intronic
CAediting_919864	chr12_104337601_+	ncRNA_intronic
CAediting_919865	chr12_104337602_+	ncRNA_intronic
CAediting_919866	chr12_104337641_+	ncRNA_intronic
CAediting_919867	chr12_104337887_+	ncRNA_intronic
CAediting_919868	chr12_104337904_+	ncRNA_intronic
CAediting_919869	chr12_104337926_+	ncRNA_intronic
CAediting_919870	chr12_104338030_+	ncRNA_intronic
CAediting_919871	chr12_104338048_+	ncRNA_intronic
CAediting_919872	chr12_104338431_+	ncRNA_intronic
CAediting_919873	chr12_104338508_+	ncRNA_intronic
CAediting_919874	chr12_104338509_+	ncRNA_intronic
CAediting_919875	chr12_104338517_+	ncRNA_intronic
CAediting_919876	chr12_104338518_+	ncRNA_intronic
CAediting_919877	chr12_104338519_+	ncRNA_intronic
CAediting_919878	chr12_104338563_+	ncRNA_intronic
CAediting_919879	chr12_104338642_+	ncRNA_intronic
CAediting_919880	chr12_104338892_+	ncRNA_intronic
CAediting_919881	chr12_104338898_+	ncRNA_intronic
CAediting_919882	chr12_104338905_+	ncRNA_intronic
CAediting_919883	chr12_104338915_+	ncRNA_intronic
CAediting_919884	chr12_104338923_+	ncRNA_intronic
CAediting_919885	chr12_104338978_+	ncRNA_intronic
CAediting_919886	chr12_104346031_+	exonic
CAediting_919887	chr12_104346036_+	exonic
CAediting_919888	chr12_104346107_+	ncRNA_intronic
CAediting_919889	chr12_104346113_+	ncRNA_intronic
CAediting_919890	chr12_104346142_+	ncRNA_intronic
CAediting_919891	chr12_104346233_+	ncRNA_intronic
CAediting_919892	chr12_104346247_+	ncRNA_intronic
CAediting_919893	chr12_104346248_+	ncRNA_intronic
CAediting_919894	chr12_104346251_+	ncRNA_intronic
CAediting_919895	chr12_104346274_+	ncRNA_intronic
CAediting_919896	chr12_104346275_+	ncRNA_intronic
CAediting_919897	chr12_104346839_+	ncRNA_intronic
CAediting_919898	chr12_104346840_+	ncRNA_intronic
CAediting_919899	chr12_104346845_+	ncRNA_intronic
CAediting_919900	chr12_104346862_+	ncRNA_intronic
CAediting_919901	chr12_104346866_+	ncRNA_intronic
CAediting_919902	chr12_104346875_+	ncRNA_intronic
CAediting_919903	chr12_104346984_+	ncRNA_intronic
CAediting_919904	chr12_104347015_+	ncRNA_intronic
CAediting_919905	chr12_104347016_+	ncRNA_intronic
CAediting_919906	chr12_104347020_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_919645	chr12_104221156_+	SINE	Alu	AluJb
CAediting_919646	chr12_104221164_+	SINE	Alu	AluJb
CAediting_919647	chr12_104221183_+	SINE	Alu	AluJb
CAediting_919648	chr12_104237858_+	SINE	Alu	AluSx4
CAediting_919649	chr12_104238409_+	LTR	ERV1	HUERS-P3b-int
CAediting_919650	chr12_104245330_+	SINE	Alu	AluSp
CAediting_919651	chr12_104245351_+	SINE	Alu	AluSp
CAediting_919652	chr12_104245406_+	SINE	Alu	AluSp
CAediting_919653	chr12_104251943_+	SINE	Alu	AluSc
CAediting_919654	chr12_104254843_+	SINE	Alu	AluSz6
CAediting_919655	chr12_104254850_+	SINE	Alu	AluSz6
CAediting_919656	chr12_104254943_+	SINE	Alu	AluSz6
CAediting_919657	chr12_104254944_+	SINE	Alu	AluSz6
CAediting_919658	chr12_104254985_+	SINE	Alu	AluSz6
CAediting_919659	chr12_104254998_+	SINE	Alu	AluSz6
CAediting_919660	chr12_104255035_+	SINE	Alu	AluSz6
CAediting_919661	chr12_104259123_+	SINE	Alu	AluSx3
CAediting_919662	chr12_104259338_+	SINE	Alu	AluSx3
CAediting_919663	chr12_104261250_+	SINE	Alu	AluSp
CAediting_919664	chr12_104289833_+	SINE	Alu	AluSx1
CAediting_919665	chr12_104289850_+	SINE	Alu	AluSx1
CAediting_919666	chr12_104289862_+	SINE	Alu	AluSx1
CAediting_919667	chr12_104290430_+	SINE	Alu	AluSz
CAediting_919668	chr12_104290436_+	SINE	Alu	AluSz
CAediting_919669	chr12_104290437_+	SINE	Alu	AluSz
CAediting_919670	chr12_104290442_+	SINE	Alu	AluSz
CAediting_919671	chr12_104290517_+	SINE	Alu	AluSz
CAediting_919672	chr12_104290528_+	SINE	Alu	AluSz
CAediting_919673	chr12_104290531_+	SINE	Alu	AluSz
CAediting_919674	chr12_104290537_+	SINE	Alu	AluSz
CAediting_919675	chr12_104290538_+	SINE	Alu	AluSz
CAediting_919676	chr12_104290543_+	SINE	Alu	AluSz
CAediting_919677	chr12_104290546_+	SINE	Alu	AluSz
CAediting_919678	chr12_104290640_+	SINE	Alu	AluSz
CAediting_919679	chr12_104290674_+	SINE	Alu	AluSz
CAediting_919680	chr12_104291018_+	SINE	Alu	FLAM_C
CAediting_919681	chr12_104291674_+	SINE	Alu	AluSg4
CAediting_919682	chr12_104291681_+	SINE	Alu	AluSg4
CAediting_919683	chr12_104291684_+	SINE	Alu	AluSg4
CAediting_919684	chr12_104291725_+	SINE	Alu	AluSg4
CAediting_919685	chr12_104291729_+	SINE	Alu	AluSg4
CAediting_919686	chr12_104291743_+	SINE	Alu	AluSg4
CAediting_919687	chr12_104291744_+	SINE	Alu	AluSg4
CAediting_919688	chr12_104292684_+	SINE	Alu	AluSq
CAediting_919689	chr12_104293482_+	SINE	Alu	AluJb
CAediting_919690	chr12_104293563_+	SINE	Alu	AluJb
CAediting_919691	chr12_104293568_+	SINE	Alu	AluJb
CAediting_919692	chr12_104293578_+	SINE	Alu	AluJb
CAediting_919693	chr12_104293580_+	SINE	Alu	AluJb
CAediting_919694	chr12_104293593_+	SINE	Alu	AluJb
CAediting_919695	chr12_104294718_+	SINE	Alu	AluJb
CAediting_919696	chr12_104294732_+	SINE	Alu	AluJb
CAediting_919697	chr12_104294733_+	SINE	Alu	AluJb
CAediting_919698	chr12_104294740_+	SINE	Alu	AluJb
CAediting_919699	chr12_104294745_+	SINE	Alu	AluJb
CAediting_919700	chr12_104296508_+	SINE	Alu	AluJb
CAediting_919701	chr12_104296509_+	SINE	Alu	AluJb
CAediting_919702	chr12_104296512_+	SINE	Alu	AluJb
CAediting_919703	chr12_104297071_+	SINE	Alu	AluSq2
CAediting_919704	chr12_104297094_+	SINE	Alu	AluSq2
CAediting_919705	chr12_104297097_+	SINE	Alu	AluSq2
CAediting_919706	chr12_104297117_+	SINE	Alu	AluSq2
CAediting_919707	chr12_104297118_+	SINE	Alu	AluSq2
CAediting_919708	chr12_104297120_+	SINE	Alu	AluSq2
CAediting_919709	chr12_104297127_+	SINE	Alu	AluSq2
CAediting_919710	chr12_104297139_+	SINE	Alu	AluSq2
CAediting_919711	chr12_104297142_+	SINE	Alu	AluSq2
CAediting_919712	chr12_104297145_+	SINE	Alu	AluSq2
CAediting_919713	chr12_104297146_+	SINE	Alu	AluSq2
CAediting_919714	chr12_104297158_+	SINE	Alu	AluSq2
CAediting_919715	chr12_104297194_+	SINE	Alu	AluSq2
CAediting_919716	chr12_104297198_+	SINE	Alu	AluSq2
CAediting_919717	chr12_104297225_+	SINE	Alu	AluSq2
CAediting_919718	chr12_104297226_+	SINE	Alu	AluSq2
CAediting_919719	chr12_104297387_+	SINE	Alu	AluSx
CAediting_919720	chr12_104297465_+	SINE	Alu	AluSx
CAediting_919721	chr12_104297466_+	SINE	Alu	AluSx
CAediting_919722	chr12_104297469_+	SINE	Alu	AluSx
CAediting_919723	chr12_104297495_+	SINE	Alu	AluSx
CAediting_919724	chr12_104297518_+	SINE	Alu	AluSx
CAediting_919725	chr12_104297548_+	SINE	Alu	AluSx
CAediting_919726	chr12_104297574_+	SINE	Alu	AluSx
CAediting_919727	chr12_104297627_+	SINE	Alu	AluSx
CAediting_919728	chr12_104297639_+	SINE	Alu	AluSx
CAediting_919729	chr12_104297648_+	SINE	Alu	AluSx
CAediting_919730	chr12_104298454_+	SINE	Alu	AluSg
CAediting_919731	chr12_104298470_+	SINE	Alu	AluSg
CAediting_919732	chr12_104298471_+	SINE	Alu	AluSg
CAediting_919733	chr12_104298476_+	SINE	Alu	AluSg
CAediting_919734	chr12_104298479_+	SINE	Alu	AluSg
CAediting_919735	chr12_104298514_+	SINE	Alu	AluSg
CAediting_919736	chr12_104298517_+	SINE	Alu	AluSg
CAediting_919737	chr12_104298540_+	SINE	Alu	AluSg
CAediting_919738	chr12_104298553_+	SINE	Alu	AluSg
CAediting_919739	chr12_104298559_+	SINE	Alu	AluSg
CAediting_919740	chr12_104298562_+	SINE	Alu	AluSg
CAediting_919741	chr12_104298563_+	SINE	Alu	AluSg
CAediting_919742	chr12_104298565_+	SINE	Alu	AluSg
CAediting_919743	chr12_104298571_+	SINE	Alu	AluSg
CAediting_919744	chr12_104298593_+	SINE	Alu	AluSg
CAediting_919745	chr12_104298597_+	SINE	Alu	AluSg
CAediting_919746	chr12_104298603_+	SINE	Alu	AluSg
CAediting_919747	chr12_104298604_+	SINE	Alu	AluSg
CAediting_919748	chr12_104298630_+	SINE	Alu	AluSg
CAediting_919749	chr12_104298636_+	SINE	Alu	AluSg
CAediting_919750	chr12_104298639_+	SINE	Alu	AluSg
CAediting_919751	chr12_104298645_+	SINE	Alu	AluSg
CAediting_919752	chr12_104298679_+	SINE	Alu	AluSg
CAediting_919753	chr12_104299491_+	SINE	Alu	AluSg
CAediting_919754	chr12_104299513_+	SINE	Alu	AluSg
CAediting_919755	chr12_104299549_+	SINE	Alu	AluSg
CAediting_919756	chr12_104299580_+	SINE	Alu	AluSg
CAediting_919757	chr12_104299581_+	SINE	Alu	AluSg
CAediting_919758	chr12_104299583_+	SINE	Alu	AluSg
CAediting_919759	chr12_104299590_+	SINE	Alu	AluSg
CAediting_919760	chr12_104299605_+	SINE	Alu	AluSg
CAediting_919761	chr12_104299611_+	SINE	Alu	AluSg
CAediting_919762	chr12_104299614_+	SINE	Alu	AluSg
CAediting_919763	chr12_104299615_+	SINE	Alu	AluSg
CAediting_919764	chr12_104299617_+	SINE	Alu	AluSg
CAediting_919765	chr12_104299620_+	SINE	Alu	AluSg
CAediting_919766	chr12_104299624_+	SINE	Alu	AluSg
CAediting_919767	chr12_104299646_+	SINE	Alu	AluSg
CAediting_919768	chr12_104299647_+	SINE	Alu	AluSg
CAediting_919769	chr12_104299652_+	SINE	Alu	AluSg
CAediting_919770	chr12_104299673_+	SINE	Alu	AluSg
CAediting_919771	chr12_104299682_+	SINE	Alu	AluSg
CAediting_919772	chr12_104299708_+	SINE	Alu	AluSg
CAediting_919773	chr12_104299712_+	SINE	Alu	AluSg
CAediting_919774	chr12_104299755_+	SINE	Alu	AluSg
CAediting_919775	chr12_104300786_+	SINE	Alu	AluSp
CAediting_919776	chr12_104300802_+	SINE	Alu	AluSp
CAediting_919777	chr12_104300812_+	SINE	Alu	AluSp
CAediting_919778	chr12_104300846_+	SINE	Alu	AluSp
CAediting_919779	chr12_104300848_+	SINE	Alu	AluSp
CAediting_919780	chr12_104300920_+	SINE	Alu	AluSp
CAediting_919781	chr12_104302655_+	SINE	Alu	AluY
CAediting_919782	chr12_104302696_+	SINE	Alu	AluY
CAediting_919783	chr12_104306029_+	SINE	Alu	AluSz6
CAediting_919784	chr12_104306033_+	SINE	Alu	AluSz6
CAediting_919785	chr12_104306109_+	SINE	Alu	AluSz6
CAediting_919786	chr12_104316494_+	SINE	Alu	AluYh3
CAediting_919787	chr12_104316529_+	SINE	Alu	AluYh3
CAediting_919788	chr12_104316588_+	SINE	Alu	AluYh3
CAediting_919789	chr12_104316596_+	SINE	Alu	AluYh3
CAediting_919790	chr12_104317598_+	SINE	Alu	AluJo
CAediting_919791	chr12_104317658_+	SINE	Alu	AluJo
CAediting_919792	chr12_104317659_+	SINE	Alu	AluJo
CAediting_919793	chr12_104317729_+	SINE	Alu	AluJo
CAediting_919794	chr12_104317739_+	SINE	Alu	AluJo
CAediting_919795	chr12_104317761_+	SINE	Alu	AluJo
CAediting_919796	chr12_104317876_+	SINE	Alu	AluSz6
CAediting_919797	chr12_104317884_+	SINE	Alu	AluSz6
CAediting_919798	chr12_104317885_+	SINE	Alu	AluSz6
CAediting_919799	chr12_104317908_+	SINE	Alu	AluSz6
CAediting_919800	chr12_104317954_+	SINE	Alu	AluSz6
CAediting_919801	chr12_104317979_+	SINE	Alu	AluSz6
CAediting_919802	chr12_104317980_+	SINE	Alu	AluSz6
CAediting_919803	chr12_104317981_+	SINE	Alu	AluSz6
CAediting_919804	chr12_104317984_+	SINE	Alu	AluSz6
CAediting_919805	chr12_104317994_+	SINE	Alu	AluSz6
CAediting_919806	chr12_104318020_+	SINE	Alu	AluSz6
CAediting_919807	chr12_104318030_+	SINE	Alu	AluSz6
CAediting_919808	chr12_104318055_+	SINE	Alu	AluSz6
CAediting_919809	chr12_104326519_+	SINE	Alu	AluSq2
CAediting_919810	chr12_104326605_+	SINE	Alu	AluSq2
CAediting_919811	chr12_104327045_+	SINE	Alu	AluSz6
CAediting_919812	chr12_104327887_+	SINE	Alu	AluSg
CAediting_919813	chr12_104327905_+	SINE	Alu	AluSg
CAediting_919814	chr12_104327906_+	SINE	Alu	AluSg
CAediting_919815	chr12_104327949_+	SINE	Alu	AluSg
CAediting_919816	chr12_104327957_+	SINE	Alu	AluSg
CAediting_919817	chr12_104327963_+	SINE	Alu	AluSg
CAediting_919818	chr12_104327972_+	SINE	Alu	AluSg
CAediting_919819	chr12_104327983_+	SINE	Alu	AluSg
CAediting_919820	chr12_104327994_+	SINE	Alu	AluSg
CAediting_919821	chr12_104327997_+	SINE	Alu	AluSg
CAediting_919822	chr12_104327999_+	SINE	Alu	AluSg
CAediting_919823	chr12_104328003_+	SINE	Alu	AluSg
CAediting_919824	chr12_104328012_+	SINE	Alu	AluSg
CAediting_919825	chr12_104328038_+	SINE	Alu	AluSg
CAediting_919826	chr12_104328044_+	SINE	Alu	AluSg
CAediting_919827	chr12_104328048_+	SINE	Alu	AluSg
CAediting_919828	chr12_104328052_+	SINE	Alu	AluSg
CAediting_919829	chr12_104328115_+	SINE	Alu	AluSg
CAediting_919830	chr12_104328479_+	SINE	Alu	AluY
CAediting_919831	chr12_104328501_+	SINE	Alu	AluY
CAediting_919832	chr12_104328502_+	SINE	Alu	AluY
CAediting_919833	chr12_104328550_+	SINE	Alu	AluY
CAediting_919834	chr12_104328579_+	SINE	Alu	AluY
CAediting_919835	chr12_104328593_+	SINE	Alu	AluY
CAediting_919836	chr12_104328605_+	SINE	Alu	AluY
CAediting_919837	chr12_104328609_+	SINE	Alu	AluY
CAediting_919838	chr12_104328638_+	SINE	Alu	AluY
CAediting_919839	chr12_104328665_+	SINE	Alu	AluY
CAediting_919840	chr12_104328704_+	SINE	Alu	AluY
CAediting_919841	chr12_104329395_+	SINE	Alu	AluJb
CAediting_919842	chr12_104329442_+	SINE	Alu	AluJb
CAediting_919843	chr12_104329448_+	SINE	Alu	AluJb
CAediting_919844	chr12_104329449_+	SINE	Alu	AluJb
CAediting_919845	chr12_104329472_+	SINE	Alu	AluJb
CAediting_919846	chr12_104329511_+	SINE	Alu	AluJb
CAediting_919847	chr12_104329561_+	SINE	Alu	AluJb
CAediting_919848	chr12_104329564_+	SINE	Alu	AluJb
CAediting_919849	chr12_104329570_+	SINE	Alu	AluJb
CAediting_919850	chr12_104329635_+	SINE	Alu	AluJb
CAediting_919851	chr12_104330617_+	SINE	Alu	AluSq10
CAediting_919852	chr12_104330862_+	SINE	Alu	AluSq10
CAediting_919853	chr12_104334462_+	SINE	Alu	AluSg
CAediting_919854	chr12_104334482_+	SINE	Alu	AluSg
CAediting_919855	chr12_104334483_+	SINE	Alu	AluSg
CAediting_919856	chr12_104334500_+	SINE	Alu	AluSg
CAediting_919857	chr12_104334508_+	SINE	Alu	AluSg
CAediting_919858	chr12_104334513_+	SINE	Alu	AluSg
CAediting_919859	chr12_104334522_+	SINE	Alu	AluSg
CAediting_919860	chr12_104334524_+	SINE	Alu	AluSg
CAediting_919861	chr12_104334608_+	SINE	Alu	AluSg
CAediting_919862	chr12_104334631_+	SINE	Alu	AluSg
CAediting_919863	chr12_104334663_+	SINE	Alu	AluSg
CAediting_919864	chr12_104337601_+	SINE	Alu	AluSz6
CAediting_919865	chr12_104337602_+	SINE	Alu	AluSz6
CAediting_919866	chr12_104337641_+	SINE	Alu	AluSz6
CAediting_919867	chr12_104337887_+	SINE	Alu	AluJr
CAediting_919868	chr12_104337904_+	SINE	Alu	AluJr
CAediting_919869	chr12_104337926_+	SINE	Alu	AluJr
CAediting_919870	chr12_104338030_+	SINE	Alu	AluJr
CAediting_919871	chr12_104338048_+	SINE	Alu	AluJr
CAediting_919872	chr12_104338431_+	SINE	Alu	AluSp
CAediting_919873	chr12_104338508_+	SINE	Alu	AluSp
CAediting_919874	chr12_104338509_+	SINE	Alu	AluSp
CAediting_919875	chr12_104338517_+	SINE	Alu	AluSp
CAediting_919876	chr12_104338518_+	SINE	Alu	AluSp
CAediting_919877	chr12_104338519_+	SINE	Alu	AluSp
CAediting_919878	chr12_104338563_+	SINE	Alu	AluSp
CAediting_919879	chr12_104338642_+	SINE	Alu	AluSp
CAediting_919880	chr12_104338892_+	SINE	Alu	AluY
CAediting_919881	chr12_104338898_+	SINE	Alu	AluY
CAediting_919882	chr12_104338905_+	SINE	Alu	AluY
CAediting_919883	chr12_104338915_+	SINE	Alu	AluY
CAediting_919884	chr12_104338923_+	SINE	Alu	AluY
CAediting_919885	chr12_104338978_+	SINE	Alu	AluY
CAediting_919886	chr12_104346031_+	SINE	Alu	AluJb
CAediting_919887	chr12_104346036_+	SINE	Alu	AluJb
CAediting_919888	chr12_104346107_+	SINE	Alu	AluJb
CAediting_919889	chr12_104346113_+	SINE	Alu	AluJb
CAediting_919890	chr12_104346142_+	SINE	Alu	AluJb
CAediting_919891	chr12_104346233_+	SINE	Alu	AluJb
CAediting_919892	chr12_104346247_+	SINE	Alu	AluJb
CAediting_919893	chr12_104346248_+	SINE	Alu	AluJb
CAediting_919894	chr12_104346251_+	SINE	Alu	AluJb
CAediting_919895	chr12_104346274_+	SINE	Alu	AluJb
CAediting_919896	chr12_104346275_+	SINE	Alu	AluJb
CAediting_919897	chr12_104346839_+	SINE	Alu	AluSx1
CAediting_919898	chr12_104346840_+	SINE	Alu	AluSx1
CAediting_919899	chr12_104346845_+	SINE	Alu	AluSx1
CAediting_919900	chr12_104346862_+	SINE	Alu	AluSx1
CAediting_919901	chr12_104346866_+	SINE	Alu	AluSx1
CAediting_919902	chr12_104346875_+	SINE	Alu	AluSx1
CAediting_919903	chr12_104346984_+	SINE	Alu	AluSx1
CAediting_919904	chr12_104347015_+	SINE	Alu	AluSx1
CAediting_919905	chr12_104347016_+	SINE	Alu	AluSx1
CAediting_919906	chr12_104347020_+	SINE	Alu	AluSx1

Top

RNA A-to-I editing events in the alternative splicing sites for TXNRD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_919886	chr12_104346031_+	104346017:104346039	3SS	0+6i	AGTTTTTTTCATTTATTTGAGAT	-7.8	AGTTTTTTTCATTTGTTTGAGAT	-8.21
ES	CAediting_919886	chr12_104346031_+	104346021:104346043	3SS	0+10i	TTTTTCATTTATTTGAGATAGGG	-15.05	TTTTTCATTTGTTTGAGATAGGG	-14.37
ES	CAediting_919887	chr12_104346036_+	104346017:104346039	3SS	0+1i	AGTTTTTTTCATTTATTTGAGAT	-7.8	AGTTTTTTTCATTTATTTGGGAT	0.95
ES	CAediting_919887	chr12_104346036_+	104346021:104346043	3SS	0+5i	TTTTTCATTTATTTGAGATAGGG	-15.05	TTTTTCATTTATTTGGGATAGGG	-14.2

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000198431.14.TXNRD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000198431.14.TXNRD1.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TXNRD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TXNRD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for TXNRD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_919890	chr12_104346142_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4691-3p	104346139	104346145	7mer-m8	104346125	104346146	154.00	-28.16
CAediting_919888	chr12_104346107_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4293	104346103	104346109	7mer-m8	104346094	104346110	152.00	-16.58
CAediting_919888	chr12_104346107_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4766-5p	104346100	104346106	7mer-m8	104346083	104346107	149.00	-17.07
CAediting_919889	chr12_104346113_+	ENSG00000198431.14	ENST00000527688	hsa-miR-6078	104346109	104346116	8mer-1a	104346098	104346116	157.00	-22.43

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_919888	chr12_104346107_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4538	104346104	104346109	6mer	104346089	104346110	148	-25.29
CAediting_919890	chr12_104346142_+	ENSG00000198431.14	ENST00000527688	hsa-miR-5690	104346139	104346145	7mer-m8	104346126	104346146	145	-17.67

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000429002	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000429002	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000429002	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000503506	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000503506	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000503506	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000354940	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000354940	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000354940	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000388854	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000388854	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000388854	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000397736	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000397736	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000397736	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000526691	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000526691	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000526691	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000526390	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000526390	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000526390	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000529546	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000529546	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000524698	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000524698	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_1054808	chr15_66496985_-	ENSG00000198431.14	ENST00000527688	hsa-miR-4512	104348550	104348556	7mer-m8	104348536	104348557	140	-14.93
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3
CAediting_580943	chr7_100356700_+	ENSG00000198431.14	ENST00000527688	hsa-miR-6840-3p	104348943	104348950	8mer-1a	104348929	104348950	145	-24.69
CAediting_77128	chr1_85133844_+	ENSG00000198431.14	ENST00000526950	hsa-miR-4423-3p	104348471	104348478	8mer-1a	104348456	104348478	153	-15.3

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000429002	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000503506	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000354940	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000388854	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000397736	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000526691	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000526390	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8
CAediting_414656	chr5_72878640_+	ENSG00000198431.14	ENST00000527688	hsa-miR-4804-3p	104348416	104348422	7mer-m8	104348403	104348423	155	-18.33
CAediting_980496	chr14_31014685_-	ENSG00000198431.14	ENST00000527688	hsa-miR-624-3p	104349560	104349565	6mer	104349546	104349566	141	-15.8

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TXNRD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for TXNRD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for TXNRD1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for TXNRD1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for TXNRD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene	UniProtAcc	DrugBank ID	Drug name	Drug activity	Drug type	Drug status
TXNRD1	Q16881	DB03147	Flavin adenine dinucleotide	Thioredoxin reductase 1, cytoplasmic	SmallMoleculeDrug	approved
TXNRD1	Q16881	DB01169	Arsenic trioxide	Thioredoxin reductase 1, cytoplasmic	SmallMoleculeDrug	approved\|investigational

Top

RelatedDiseases for TXNRD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TXNRD1	C0001430	Adenoma	1	CTD_human
TXNRD1	C0009402	Colorectal Carcinoma	1	CTD_human
TXNRD1	C0009404	Colorectal Neoplasms	1	CTD_human
TXNRD1	C0011616	Contact Dermatitis	1	CTD_human
TXNRD1	C0014544	Epilepsy	1	CTD_human
TXNRD1	C0025500	Mesothelioma	1	CTD_human
TXNRD1	C0029408	Degenerative polyarthritis	1	CTD_human
TXNRD1	C0086237	Epilepsy, Cryptogenic	1	CTD_human
TXNRD1	C0086743	Osteoarthrosis Deformans	1	CTD_human
TXNRD1	C0151744	Myocardial Ischemia	1	CTD_human
TXNRD1	C0162351	Contact hypersensitivity	1	CTD_human
TXNRD1	C0205646	Adenoma, Basal Cell	1	CTD_human
TXNRD1	C0205647	Follicular adenoma	1	CTD_human
TXNRD1	C0205648	Adenoma, Microcystic	1	CTD_human
TXNRD1	C0205649	Adenoma, Monomorphic	1	CTD_human
TXNRD1	C0205650	Papillary adenoma	1	CTD_human
TXNRD1	C0205651	Adenoma, Trabecular	1	CTD_human
TXNRD1	C0236018	Aura	1	CTD_human
TXNRD1	C0243038	Carcinoma, Lewis Lung	1	CTD_human
TXNRD1	C0751111	Awakening Epilepsy	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene