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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: PPIEL (CAeditome ID:728448)

Gene summary for PPIEL

check button Gene summary
Gene informationGene symbol

PPIEL

Gene ID

728448

Gene namepeptidylprolyl isomerase E like pseudogene
SynonymsPPIEP1
Cytomap

1p34.3

Type of genepseudo
Descriptionpeptidylprolyl isomerase E (cyclophilin E) pseudogene 1
Modification date20210518
UniProtAcc

.

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID

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RNA A-to-I events for PPIEL

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000243970.1

check button RNA A-to-I editing events in Cancer.
CAediting_49888(39532899, -), CAediting_49889(39532951, -), CAediting_49890(39532981, -), CAediting_49891(39532997, -), CAediting_49892(39533834, -), CAediting_49893(39533836, -), CAediting_49894(39533848, -), CAediting_49895(39533901, -), CAediting_49896(39533905, -), CAediting_49897(39533910, -), CAediting_49898(39536098, -), CAediting_49899(39536114, -), CAediting_49900(39536120, -), CAediting_49901(39536180, -), CAediting_49902(39537280, -), CAediting_49903(39537292, -), CAediting_49904(39537382, -), CAediting_49905(39537451, -), CAediting_49906(39537805, -), CAediting_49907(39537867, -), CAediting_49908(39537874, -), CAediting_49909(39537875, -), CAediting_49910(39537947, -), CAediting_49911(39539993, -), CAediting_49912(39540000, -), CAediting_49913(39540057, -), CAediting_49914(39540065, -), CAediting_49915(39540101, -), CAediting_49916(39542603, -), CAediting_49917(39543200, -), CAediting_49918(39543381, -), CAediting_49919(39545129, -), CAediting_49920(39545130, -), CAediting_49921(39545154, -), CAediting_49922(39545165, -), CAediting_49923(39545166, -), CAediting_49924(39545168, -), CAediting_49925(39545189, -), CAediting_49926(39545192, -), CAediting_49927(39545197, -), CAediting_49928(39545210, -), CAediting_49929(39545211, -), CAediting_49930(39545215, -), CAediting_49931(39545221, -), CAediting_49932(39545238, -), CAediting_49933(39545264, -), CAediting_49934(39545278, -), CAediting_49935(39545373, -), CAediting_49936(39545390, -), CAediting_49937(39546502, -), CAediting_49938(39546520, -), CAediting_49939(39546540, -), CAediting_49940(39546545, -), CAediting_49941(39546549, -), CAediting_49942(39546569, -), CAediting_49943(39546570, -), CAediting_49944(39546579, -), CAediting_49945(39546584, -), CAediting_49946(39546588, -), CAediting_49947(39546597, -), CAediting_49948(39546601, -), CAediting_49949(39546605, -), CAediting_49950(39546610, -), CAediting_49951(39546611, -), CAediting_49952(39546637, -), CAediting_49953(39546641, -), CAediting_49954(39546646, -), CAediting_49955(39546649, -), CAediting_49956(39546650, -), CAediting_49957(39546675, -), CAediting_49958(39546699, -), CAediting_49959(39546710, -), CAediting_49960(39546720, -), CAediting_49961(39546737, -), CAediting_49962(39546742, -), CAediting_49963(39546743, -), CAediting_49964(39546775, -), CAediting_49965(39546797, -), CAediting_49966(39546869, -), CAediting_49967(39546877, -), CAediting_49968(39546889, -), CAediting_49969(39546890, -), CAediting_49970(39546943, -), CAediting_49971(39546965, -), CAediting_49972(39546969, -), CAediting_49973(39546996, -), CAediting_49974(39547000, -), CAediting_49975(39547019, -), CAediting_49976(39547020, -), CAediting_49977(39547026, -), CAediting_49978(39547030, -), CAediting_49979(39547038, -), CAediting_49980(39547055, -), CAediting_49981(39547056, -), CAediting_49982(39547062, -), CAediting_49983(39547069, -), CAediting_49984(39547076, -), CAediting_49985(39547081, -), CAediting_49986(39547086, -), CAediting_49987(39547091, -), CAediting_49988(39547105, -), CAediting_49989(39547132, -), CAediting_49990(39547144, -), CAediting_49991(39555207, -), CAediting_49992(39557891, -), CAediting_49993(39557892, -), CAediting_49994(39557893, -), CAediting_49995(39558269, -),

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RNA editing positional annotations for PPIEL using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_49888chr1_39532899_-ncRNA_intronic
CAediting_49889chr1_39532951_-ncRNA_intronic
CAediting_49890chr1_39532981_-ncRNA_intronic
CAediting_49891chr1_39532997_-ncRNA_intronic
CAediting_49892chr1_39533834_-ncRNA_intronic
CAediting_49893chr1_39533836_-ncRNA_intronic
CAediting_49894chr1_39533848_-ncRNA_intronic
CAediting_49895chr1_39533901_-ncRNA_intronic
CAediting_49896chr1_39533905_-ncRNA_intronic
CAediting_49897chr1_39533910_-ncRNA_intronic
CAediting_49898chr1_39536098_-ncRNA_intronic
CAediting_49899chr1_39536114_-ncRNA_intronic
CAediting_49900chr1_39536120_-ncRNA_intronic
CAediting_49901chr1_39536180_-ncRNA_intronic
CAediting_49902chr1_39537280_-ncRNA_exonic
CAediting_49903chr1_39537292_-ncRNA_intronic
CAediting_49904chr1_39537382_-ncRNA_intronic
CAediting_49905chr1_39537451_-ncRNA_intronic
CAediting_49906chr1_39537805_-ncRNA_intronic
CAediting_49907chr1_39537867_-ncRNA_intronic
CAediting_49908chr1_39537874_-ncRNA_intronic
CAediting_49909chr1_39537875_-ncRNA_intronic
CAediting_49910chr1_39537947_-ncRNA_intronic
CAediting_49911chr1_39539993_-ncRNA_intronic
CAediting_49912chr1_39540000_-ncRNA_intronic
CAediting_49913chr1_39540057_-ncRNA_intronic
CAediting_49914chr1_39540065_-ncRNA_intronic
CAediting_49915chr1_39540101_-ncRNA_intronic
CAediting_49916chr1_39542603_-ncRNA_intronic
CAediting_49917chr1_39543200_-ncRNA_intronic
CAediting_49918chr1_39543381_-ncRNA_intronic
CAediting_49919chr1_39545129_-ncRNA_intronic
CAediting_49920chr1_39545130_-ncRNA_intronic
CAediting_49921chr1_39545154_-ncRNA_intronic
CAediting_49922chr1_39545165_-ncRNA_intronic
CAediting_49923chr1_39545166_-ncRNA_intronic
CAediting_49924chr1_39545168_-ncRNA_intronic
CAediting_49925chr1_39545189_-ncRNA_intronic
CAediting_49926chr1_39545192_-ncRNA_intronic
CAediting_49927chr1_39545197_-ncRNA_intronic
CAediting_49928chr1_39545210_-ncRNA_intronic
CAediting_49929chr1_39545211_-ncRNA_intronic
CAediting_49930chr1_39545215_-ncRNA_intronic
CAediting_49931chr1_39545221_-ncRNA_intronic
CAediting_49932chr1_39545238_-ncRNA_intronic
CAediting_49933chr1_39545264_-ncRNA_intronic
CAediting_49934chr1_39545278_-ncRNA_intronic
CAediting_49935chr1_39545373_-ncRNA_intronic
CAediting_49936chr1_39545390_-ncRNA_intronic
CAediting_49937chr1_39546502_-ncRNA_intronic
CAediting_49938chr1_39546520_-ncRNA_intronic
CAediting_49939chr1_39546540_-ncRNA_intronic
CAediting_49940chr1_39546545_-ncRNA_intronic
CAediting_49941chr1_39546549_-ncRNA_intronic
CAediting_49942chr1_39546569_-ncRNA_intronic
CAediting_49943chr1_39546570_-ncRNA_intronic
CAediting_49944chr1_39546579_-ncRNA_intronic
CAediting_49945chr1_39546584_-ncRNA_intronic
CAediting_49946chr1_39546588_-ncRNA_intronic
CAediting_49947chr1_39546597_-ncRNA_intronic
CAediting_49948chr1_39546601_-ncRNA_intronic
CAediting_49949chr1_39546605_-ncRNA_intronic
CAediting_49950chr1_39546610_-ncRNA_intronic
CAediting_49951chr1_39546611_-ncRNA_intronic
CAediting_49952chr1_39546637_-ncRNA_intronic
CAediting_49953chr1_39546641_-ncRNA_intronic
CAediting_49954chr1_39546646_-ncRNA_intronic
CAediting_49955chr1_39546649_-ncRNA_intronic
CAediting_49956chr1_39546650_-ncRNA_intronic
CAediting_49957chr1_39546675_-ncRNA_intronic
CAediting_49958chr1_39546699_-ncRNA_intronic
CAediting_49959chr1_39546710_-ncRNA_intronic
CAediting_49960chr1_39546720_-ncRNA_intronic
CAediting_49961chr1_39546737_-ncRNA_intronic
CAediting_49962chr1_39546742_-ncRNA_intronic
CAediting_49963chr1_39546743_-ncRNA_intronic
CAediting_49964chr1_39546775_-ncRNA_intronic
CAediting_49965chr1_39546797_-ncRNA_intronic
CAediting_49966chr1_39546869_-ncRNA_intronic
CAediting_49967chr1_39546877_-ncRNA_intronic
CAediting_49968chr1_39546889_-ncRNA_intronic
CAediting_49969chr1_39546890_-ncRNA_intronic
CAediting_49970chr1_39546943_-ncRNA_intronic
CAediting_49971chr1_39546965_-ncRNA_intronic
CAediting_49972chr1_39546969_-ncRNA_intronic
CAediting_49973chr1_39546996_-ncRNA_intronic
CAediting_49974chr1_39547000_-ncRNA_intronic
CAediting_49975chr1_39547019_-ncRNA_intronic
CAediting_49976chr1_39547020_-ncRNA_intronic
CAediting_49977chr1_39547026_-ncRNA_intronic
CAediting_49978chr1_39547030_-ncRNA_intronic
CAediting_49979chr1_39547038_-ncRNA_intronic
CAediting_49980chr1_39547055_-ncRNA_intronic
CAediting_49981chr1_39547056_-ncRNA_intronic
CAediting_49982chr1_39547062_-ncRNA_intronic
CAediting_49983chr1_39547069_-ncRNA_intronic
CAediting_49984chr1_39547076_-ncRNA_intronic
CAediting_49985chr1_39547081_-ncRNA_intronic
CAediting_49986chr1_39547086_-ncRNA_intronic
CAediting_49987chr1_39547091_-ncRNA_intronic
CAediting_49988chr1_39547105_-ncRNA_intronic
CAediting_49989chr1_39547132_-ncRNA_intronic
CAediting_49990chr1_39547144_-ncRNA_intronic
CAediting_49991chr1_39555207_-ncRNA_intronic
CAediting_49992chr1_39557891_-ncRNA_intronic
CAediting_49993chr1_39557892_-ncRNA_intronic
CAediting_49994chr1_39557893_-ncRNA_intronic
CAediting_49995chr1_39558269_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_49888chr1_39532899_-SINEAluAluJr
CAediting_49889chr1_39532951_-SINEAluAluJr
CAediting_49890chr1_39532981_-SINEAluAluJr
CAediting_49891chr1_39532997_-SINEAluAluJr
CAediting_49892chr1_39533834_-SINEAluFLAM_C
CAediting_49893chr1_39533836_-SINEAluFLAM_C
CAediting_49894chr1_39533848_-SINEAluFLAM_C
CAediting_49895chr1_39533901_-SINEAluFLAM_C
CAediting_49896chr1_39533905_-SINEAluFLAM_C
CAediting_49897chr1_39533910_-SINEAluFLAM_C
CAediting_49898chr1_39536098_-SINEAluAluSz6
CAediting_49899chr1_39536114_-SINEAluAluSz6
CAediting_49900chr1_39536120_-SINEAluAluSz6
CAediting_49901chr1_39536180_-SINEAluAluSz6
CAediting_49902chr1_39537280_-SINEAluAluJb
CAediting_49903chr1_39537292_-SINEAluAluJb
CAediting_49904chr1_39537382_-SINEAluAluJb
CAediting_49905chr1_39537451_-SINEAluAluJb
CAediting_49906chr1_39537805_-SINEAluAluJb
CAediting_49907chr1_39537867_-SINEAluAluJb
CAediting_49908chr1_39537874_-SINEAluAluJb
CAediting_49909chr1_39537875_-SINEAluAluJb
CAediting_49910chr1_39537947_-SINEAluAluJb
CAediting_49911chr1_39539993_-SINEAluAluJb
CAediting_49912chr1_39540000_-SINEAluAluJb
CAediting_49913chr1_39540057_-SINEAluAluJb
CAediting_49914chr1_39540065_-SINEAluAluJb
CAediting_49915chr1_39540101_-SINEAluAluJb
CAediting_49916chr1_39542603_-SINEAluAluSq2
CAediting_49917chr1_39543200_-SINEAluAluSq2
CAediting_49918chr1_39543381_-SINEAluAluSq2
CAediting_49919chr1_39545129_-SINEAluAluJb
CAediting_49920chr1_39545130_-SINEAluAluJb
CAediting_49921chr1_39545154_-SINEAluAluJb
CAediting_49922chr1_39545165_-SINEAluAluJb
CAediting_49923chr1_39545166_-SINEAluAluJb
CAediting_49924chr1_39545168_-SINEAluAluJb
CAediting_49925chr1_39545189_-SINEAluAluJb
CAediting_49926chr1_39545192_-SINEAluAluJb
CAediting_49927chr1_39545197_-SINEAluAluJb
CAediting_49928chr1_39545210_-SINEAluAluJb
CAediting_49929chr1_39545211_-SINEAluAluJb
CAediting_49930chr1_39545215_-SINEAluAluJb
CAediting_49931chr1_39545221_-SINEAluAluJb
CAediting_49932chr1_39545238_-SINEAluAluJb
CAediting_49933chr1_39545264_-SINEAluAluJb
CAediting_49934chr1_39545278_-SINEAluAluJb
CAediting_49935chr1_39545373_-SINEAluAluJb
CAediting_49936chr1_39545390_-SINEAluAluJb
CAediting_49937chr1_39546502_-SINEAluAluSg
CAediting_49938chr1_39546520_-SINEAluAluSg
CAediting_49939chr1_39546540_-SINEAluAluSg
CAediting_49940chr1_39546545_-SINEAluAluSg
CAediting_49941chr1_39546549_-SINEAluAluSg
CAediting_49942chr1_39546569_-SINEAluAluSg
CAediting_49943chr1_39546570_-SINEAluAluSg
CAediting_49944chr1_39546579_-SINEAluAluSg
CAediting_49945chr1_39546584_-SINEAluAluSg
CAediting_49946chr1_39546588_-SINEAluAluSg
CAediting_49947chr1_39546597_-SINEAluAluSg
CAediting_49948chr1_39546601_-SINEAluAluSg
CAediting_49949chr1_39546605_-SINEAluAluSg
CAediting_49950chr1_39546610_-SINEAluAluSg
CAediting_49951chr1_39546611_-SINEAluAluSg
CAediting_49952chr1_39546637_-SINEAluAluSg
CAediting_49953chr1_39546641_-SINEAluAluSg
CAediting_49954chr1_39546646_-SINEAluAluSg
CAediting_49955chr1_39546649_-SINEAluAluSg
CAediting_49956chr1_39546650_-SINEAluAluSg
CAediting_49957chr1_39546675_-SINEAluAluSg
CAediting_49958chr1_39546699_-SINEAluAluSg
CAediting_49959chr1_39546710_-SINEAluAluSg
CAediting_49960chr1_39546720_-SINEAluAluSg
CAediting_49961chr1_39546737_-SINEAluAluSg
CAediting_49962chr1_39546742_-SINEAluAluSg
CAediting_49963chr1_39546743_-SINEAluAluSg
CAediting_49965chr1_39546797_-LINEL2L2c
CAediting_49966chr1_39546869_-SINEAluAluJb
CAediting_49967chr1_39546877_-SINEAluAluJb
CAediting_49968chr1_39546889_-SINEAluAluJb
CAediting_49969chr1_39546890_-SINEAluAluJb
CAediting_49970chr1_39546943_-SINEAluAluJb
CAediting_49971chr1_39546965_-SINEAluAluJb
CAediting_49972chr1_39546969_-SINEAluAluJb
CAediting_49973chr1_39546996_-SINEAluAluJb
CAediting_49974chr1_39547000_-SINEAluAluJb
CAediting_49975chr1_39547019_-SINEAluAluJb
CAediting_49976chr1_39547020_-SINEAluAluJb
CAediting_49977chr1_39547026_-SINEAluAluJb
CAediting_49978chr1_39547030_-SINEAluAluJb
CAediting_49979chr1_39547038_-SINEAluAluJb
CAediting_49980chr1_39547055_-SINEAluAluJb
CAediting_49981chr1_39547056_-SINEAluAluJb
CAediting_49982chr1_39547062_-SINEAluAluJb
CAediting_49983chr1_39547069_-SINEAluAluJb
CAediting_49984chr1_39547076_-SINEAluAluJb
CAediting_49985chr1_39547081_-SINEAluAluJb
CAediting_49986chr1_39547086_-SINEAluAluJb
CAediting_49987chr1_39547091_-SINEAluAluJb
CAediting_49988chr1_39547105_-SINEAluAluJb
CAediting_49989chr1_39547132_-SINEAluAluJb
CAediting_49990chr1_39547144_-SINEAluAluJb
CAediting_49991chr1_39555207_-SINEAluAluSx3
CAediting_49992chr1_39557891_-SINEAluAluY
CAediting_49993chr1_39557892_-SINEAluAluY
CAediting_49994chr1_39557893_-SINEAluAluY
CAediting_49995chr1_39558269_-SINEAluAluY

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RNA A-to-I editing events in the alternative splicing sites for PPIEL

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000243970.1.PPIEL.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000243970.1.PPIEL.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for PPIEL

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for PPIEL

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for PPIEL

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for PPIEL

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for PPIEL

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_49982chr1_39547062_-0.02448566494159190.287838786386168....
OVCAediting_49986chr1_39547086_-0.006286496575861610.348936261470613....

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Relation with cancer stages for PPIEL

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.

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Relation with survival for PPIEL

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for PPIEL

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for PPIEL

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
PPIELC0005586Bipolar Disorder1PSYGENET