Home

Download

Statistics

Examples

Help

Contact

Editing gene: D2HGDH (CAeditome ID:728294)

Gene summary for D2HGDH

Gene summary

Gene information	Gene symbol	D2HGDH
	Gene ID	728294
	Gene name	D-2-hydroxyglutarate dehydrogenase
	Synonyms	D2HGD
	Cytomap	2q37.3
	Type of gene	protein-coding
	Description	D-2-hydroxyglutarate dehydrogenase, mitochondrial
	Modification date	20210524
	UniProtAcc	Q8N465
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
D2HGDH	GO:0005739	D-2-hydroxyglutarate dehydrogenase, mitochondrial	0000052

Top

RNA A-to-I events for D2HGDH

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000180902.15

RNA A-to-I editing events in Cancer.

CAediting_253617(241736135, +), CAediting_253618(241737705, +), CAediting_253619(241737726, +), CAediting_253620(241746458, +), CAediting_253621(241746498, +), CAediting_253622(241746499, +), CAediting_253623(241746504, +), CAediting_253624(241746520, +), CAediting_253625(241746534, +), CAediting_253626(241746539, +), CAediting_253627(241746544, +), CAediting_253628(241746568, +), CAediting_253629(241746577, +), CAediting_253630(241746578, +), CAediting_253631(241746589, +), CAediting_253632(241746592, +), CAediting_253633(241746607, +), CAediting_253634(241746618, +), CAediting_253635(241746621, +), CAediting_253636(241746634, +), CAediting_253637(241746635, +), CAediting_253638(241746661, +), CAediting_253639(241746711, +), CAediting_253640(241746712, +), CAediting_253641(241746741, +), CAediting_253642(241746777, +), CAediting_253643(241746827, +), CAediting_253644(241746838, +), CAediting_253645(241746987, +), CAediting_253646(241746991, +), CAediting_253647(241746992, +), CAediting_253648(241747017, +), CAediting_253649(241747018, +), CAediting_253650(241747064, +), CAediting_253651(241747067, +), CAediting_253652(241747077, +), CAediting_253653(241747090, +), CAediting_253654(241747093, +), CAediting_253655(241747128, +), CAediting_253656(241747131, +), CAediting_253657(241747143, +), CAediting_253658(241747156, +), CAediting_253659(241747168, +), CAediting_253660(241747182, +), CAediting_253661(241747183, +), CAediting_253662(241747197, +), CAediting_253663(241747586, +), CAediting_253664(241747592, +), CAediting_253665(241747612, +), CAediting_253666(241747624, +), CAediting_253667(241747632, +), CAediting_253668(241747648, +), CAediting_253669(241747655, +), CAediting_253670(241747692, +), CAediting_253671(241747718, +), CAediting_253672(241747747, +), CAediting_253673(241747753, +), CAediting_253674(241747766, +), CAediting_253675(241747772, +), CAediting_253676(241747784, +), CAediting_253677(241747792, +), CAediting_253678(241747797, +), CAediting_253679(241747798, +), CAediting_253680(241747799, +), CAediting_253681(241747801, +), CAediting_253682(241747823, +), CAediting_253683(241747824, +), CAediting_253684(241747825, +), CAediting_253685(241747837, +), CAediting_253686(241747839, +), CAediting_253687(241748144, +), CAediting_253688(241748152, +), CAediting_253689(241748161, +), CAediting_253690(241748185, +), CAediting_253691(241748186, +), CAediting_253692(241748238, +), CAediting_253693(241748247, +), CAediting_253694(241748250, +), CAediting_253695(241748260, +), CAediting_253696(241748282, +), CAediting_253697(241748286, +), CAediting_253698(241748301, +), CAediting_253699(241748304, +), CAediting_253700(241748306, +), CAediting_253701(241748330, +), CAediting_253702(241748355, +), CAediting_253703(241748356, +), CAediting_253704(241748383, +), CAediting_253705(241748395, +), CAediting_253706(241750897, +), CAediting_253707(241751010, +), CAediting_253708(241753869, +), CAediting_253709(241754077, +), CAediting_253710(241754360, +), CAediting_253711(241754371, +), CAediting_253712(241754388, +), CAediting_253713(241754389, +), CAediting_253714(241754394, +), CAediting_253715(241754411, +), CAediting_253716(241754412, +), CAediting_253717(241754415, +), CAediting_253718(241754424, +), CAediting_253719(241754443, +), CAediting_253720(241754448, +), CAediting_253721(241754647, +), CAediting_253722(241754704, +), CAediting_253723(241754707, +), CAediting_253724(241754721, +), CAediting_253725(241754730, +), CAediting_253726(241754733, +), CAediting_253727(241756523, +), CAediting_253728(241756540, +), CAediting_253729(241756552, +), CAediting_253730(241756585, +), CAediting_253731(241756596, +), CAediting_253732(241756601, +), CAediting_253733(241756621, +), CAediting_253734(241756622, +), CAediting_253735(241756625, +), CAediting_253736(241756626, +), CAediting_253737(241756661, +), CAediting_253738(241756671, +), CAediting_253739(241756687, +), CAediting_253740(241756688, +), CAediting_253741(241756705, +), CAediting_253742(241756744, +), CAediting_253743(241756769, +), CAediting_253744(241756783, +), CAediting_253745(241756784, +), CAediting_253746(241757670, +), CAediting_253747(241757680, +), CAediting_253748(241757702, +), CAediting_253749(241757703, +), CAediting_253750(241757738, +), CAediting_253751(241757743, +), CAediting_253752(241757772, +), CAediting_253753(241757777, +), CAediting_253754(241757782, +), CAediting_253755(241757796, +), CAediting_253756(241757797, +), CAediting_253757(241757798, +), CAediting_253758(241757812, +), CAediting_253759(241757813, +), CAediting_253760(241757828, +), CAediting_253761(241757839, +), CAediting_253762(241757844, +), CAediting_253763(241757900, +), CAediting_253764(241757909, +), CAediting_253765(241757916, +), CAediting_253766(241757950, +), CAediting_253767(241758653, +), CAediting_253768(241758655, +), CAediting_253769(241758656, +), CAediting_253770(241758669, +), CAediting_253771(241758673, +), CAediting_253772(241758705, +), CAediting_253773(241758711, +), CAediting_253774(241758860, +), CAediting_253775(241758873, +), CAediting_253776(241758874, +), CAediting_253777(241758902, +), CAediting_253778(241758906, +), CAediting_253779(241758913, +), CAediting_253780(241758915, +), CAediting_253781(241761265, +), CAediting_253782(241761267, +), CAediting_253783(241761284, +), CAediting_253784(241761305, +), CAediting_253785(241761306, +), CAediting_253786(241761307, +), CAediting_253787(241761368, +), CAediting_253788(241761377, +), CAediting_253789(241761381, +), CAediting_253790(241761392, +), CAediting_253791(241761484, +), CAediting_253792(241761489, +), CAediting_253793(241762255, +), CAediting_253794(241762269, +), CAediting_253795(241762274, +), CAediting_253796(241762294, +), CAediting_253797(241762301, +), CAediting_253798(241762322, +), CAediting_253799(241762332, +), CAediting_253800(241762339, +), CAediting_253801(241763753, +), CAediting_253802(241763757, +), CAediting_253803(241763774, +), CAediting_253804(241763780, +), CAediting_253805(241763791, +), CAediting_253806(241763792, +), CAediting_253807(241763797, +), CAediting_253808(241763820, +), CAediting_253809(241763828, +), CAediting_253810(241763829, +), CAediting_253811(241763893, +), CAediting_253812(241763921, +), CAediting_253813(241763929, +), CAediting_253814(241763943, +), CAediting_253815(241763946, +), CAediting_253816(241763950, +), CAediting_253817(241763952, +), CAediting_253818(241763959, +), CAediting_253819(241764001, +),

Top

RNA editing positional annotations for D2HGDH using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_253617	chr2_241736135_+	ncRNA_exonic
CAediting_253618	chr2_241737705_+	intronic
CAediting_253619	chr2_241737726_+	intronic
CAediting_253620	chr2_241746458_+	intronic
CAediting_253621	chr2_241746498_+	intronic
CAediting_253622	chr2_241746499_+	intronic
CAediting_253623	chr2_241746504_+	intronic
CAediting_253624	chr2_241746520_+	intronic
CAediting_253625	chr2_241746534_+	intronic
CAediting_253626	chr2_241746539_+	intronic
CAediting_253627	chr2_241746544_+	intronic
CAediting_253628	chr2_241746568_+	intronic
CAediting_253629	chr2_241746577_+	intronic
CAediting_253630	chr2_241746578_+	intronic
CAediting_253631	chr2_241746589_+	intronic
CAediting_253632	chr2_241746592_+	intronic
CAediting_253633	chr2_241746607_+	intronic
CAediting_253634	chr2_241746618_+	intronic
CAediting_253635	chr2_241746621_+	intronic
CAediting_253636	chr2_241746634_+	intronic
CAediting_253637	chr2_241746635_+	intronic
CAediting_253638	chr2_241746661_+	intronic
CAediting_253639	chr2_241746711_+	intronic
CAediting_253640	chr2_241746712_+	intronic
CAediting_253641	chr2_241746741_+	intronic
CAediting_253642	chr2_241746777_+	intronic
CAediting_253643	chr2_241746827_+	intronic
CAediting_253644	chr2_241746838_+	intronic
CAediting_253645	chr2_241746987_+	intronic
CAediting_253646	chr2_241746991_+	intronic
CAediting_253647	chr2_241746992_+	intronic
CAediting_253648	chr2_241747017_+	intronic
CAediting_253649	chr2_241747018_+	intronic
CAediting_253650	chr2_241747064_+	intronic
CAediting_253651	chr2_241747067_+	intronic
CAediting_253652	chr2_241747077_+	intronic
CAediting_253653	chr2_241747090_+	intronic
CAediting_253654	chr2_241747093_+	intronic
CAediting_253655	chr2_241747128_+	intronic
CAediting_253656	chr2_241747131_+	intronic
CAediting_253657	chr2_241747143_+	intronic
CAediting_253658	chr2_241747156_+	intronic
CAediting_253659	chr2_241747168_+	intronic
CAediting_253660	chr2_241747182_+	intronic
CAediting_253661	chr2_241747183_+	intronic
CAediting_253662	chr2_241747197_+	intronic
CAediting_253663	chr2_241747586_+	intronic
CAediting_253664	chr2_241747592_+	intronic
CAediting_253665	chr2_241747612_+	intronic
CAediting_253666	chr2_241747624_+	intronic
CAediting_253667	chr2_241747632_+	intronic
CAediting_253668	chr2_241747648_+	intronic
CAediting_253669	chr2_241747655_+	intronic
CAediting_253670	chr2_241747692_+	intronic
CAediting_253671	chr2_241747718_+	intronic
CAediting_253672	chr2_241747747_+	intronic
CAediting_253673	chr2_241747753_+	intronic
CAediting_253674	chr2_241747766_+	intronic
CAediting_253675	chr2_241747772_+	intronic
CAediting_253676	chr2_241747784_+	intronic
CAediting_253677	chr2_241747792_+	intronic
CAediting_253678	chr2_241747797_+	intronic
CAediting_253679	chr2_241747798_+	intronic
CAediting_253680	chr2_241747799_+	intronic
CAediting_253681	chr2_241747801_+	intronic
CAediting_253682	chr2_241747823_+	intronic
CAediting_253683	chr2_241747824_+	intronic
CAediting_253684	chr2_241747825_+	intronic
CAediting_253685	chr2_241747837_+	intronic
CAediting_253686	chr2_241747839_+	intronic
CAediting_253687	chr2_241748144_+	intronic
CAediting_253688	chr2_241748152_+	intronic
CAediting_253689	chr2_241748161_+	intronic
CAediting_253690	chr2_241748185_+	intronic
CAediting_253691	chr2_241748186_+	intronic
CAediting_253692	chr2_241748238_+	intronic
CAediting_253693	chr2_241748247_+	intronic
CAediting_253694	chr2_241748250_+	intronic
CAediting_253695	chr2_241748260_+	intronic
CAediting_253696	chr2_241748282_+	intronic
CAediting_253697	chr2_241748286_+	intronic
CAediting_253698	chr2_241748301_+	intronic
CAediting_253699	chr2_241748304_+	intronic
CAediting_253700	chr2_241748306_+	intronic
CAediting_253701	chr2_241748330_+	intronic
CAediting_253702	chr2_241748355_+	intronic
CAediting_253703	chr2_241748356_+	intronic
CAediting_253704	chr2_241748383_+	intronic
CAediting_253705	chr2_241748395_+	intronic
CAediting_253706	chr2_241750897_+	ncRNA_intronic
CAediting_253707	chr2_241751010_+	ncRNA_intronic
CAediting_253708	chr2_241753869_+	ncRNA_intronic
CAediting_253709	chr2_241754077_+	ncRNA_intronic
CAediting_253710	chr2_241754360_+	ncRNA_intronic
CAediting_253711	chr2_241754371_+	ncRNA_intronic
CAediting_253712	chr2_241754388_+	ncRNA_intronic
CAediting_253713	chr2_241754389_+	ncRNA_intronic
CAediting_253714	chr2_241754394_+	ncRNA_intronic
CAediting_253715	chr2_241754411_+	ncRNA_intronic
CAediting_253716	chr2_241754412_+	ncRNA_intronic
CAediting_253717	chr2_241754415_+	ncRNA_intronic
CAediting_253718	chr2_241754424_+	ncRNA_intronic
CAediting_253719	chr2_241754443_+	ncRNA_intronic
CAediting_253720	chr2_241754448_+	ncRNA_intronic
CAediting_253721	chr2_241754647_+	ncRNA_exonic
CAediting_253722	chr2_241754704_+	ncRNA_exonic
CAediting_253723	chr2_241754707_+	ncRNA_exonic
CAediting_253724	chr2_241754721_+	ncRNA_exonic
CAediting_253725	chr2_241754730_+	ncRNA_exonic
CAediting_253726	chr2_241754733_+	ncRNA_exonic
CAediting_253727	chr2_241756523_+	ncRNA_intronic
CAediting_253728	chr2_241756540_+	ncRNA_intronic
CAediting_253729	chr2_241756552_+	ncRNA_intronic
CAediting_253730	chr2_241756585_+	ncRNA_intronic
CAediting_253731	chr2_241756596_+	ncRNA_intronic
CAediting_253732	chr2_241756601_+	ncRNA_intronic
CAediting_253733	chr2_241756621_+	ncRNA_intronic
CAediting_253734	chr2_241756622_+	ncRNA_intronic
CAediting_253735	chr2_241756625_+	ncRNA_intronic
CAediting_253736	chr2_241756626_+	ncRNA_intronic
CAediting_253737	chr2_241756661_+	ncRNA_intronic
CAediting_253738	chr2_241756671_+	ncRNA_intronic
CAediting_253739	chr2_241756687_+	ncRNA_intronic
CAediting_253740	chr2_241756688_+	ncRNA_intronic
CAediting_253741	chr2_241756705_+	ncRNA_intronic
CAediting_253742	chr2_241756744_+	ncRNA_intronic
CAediting_253743	chr2_241756769_+	ncRNA_intronic
CAediting_253744	chr2_241756783_+	ncRNA_intronic
CAediting_253745	chr2_241756784_+	ncRNA_intronic
CAediting_253746	chr2_241757670_+	ncRNA_intronic
CAediting_253747	chr2_241757680_+	ncRNA_intronic
CAediting_253748	chr2_241757702_+	ncRNA_intronic
CAediting_253749	chr2_241757703_+	ncRNA_intronic
CAediting_253750	chr2_241757738_+	ncRNA_intronic
CAediting_253751	chr2_241757743_+	ncRNA_intronic
CAediting_253752	chr2_241757772_+	ncRNA_intronic
CAediting_253753	chr2_241757777_+	ncRNA_intronic
CAediting_253754	chr2_241757782_+	ncRNA_intronic
CAediting_253755	chr2_241757796_+	ncRNA_intronic
CAediting_253756	chr2_241757797_+	ncRNA_intronic
CAediting_253757	chr2_241757798_+	ncRNA_intronic
CAediting_253758	chr2_241757812_+	ncRNA_intronic
CAediting_253759	chr2_241757813_+	ncRNA_intronic
CAediting_253760	chr2_241757828_+	ncRNA_intronic
CAediting_253761	chr2_241757839_+	ncRNA_intronic
CAediting_253762	chr2_241757844_+	ncRNA_intronic
CAediting_253763	chr2_241757900_+	ncRNA_intronic
CAediting_253764	chr2_241757909_+	ncRNA_intronic
CAediting_253765	chr2_241757916_+	ncRNA_intronic
CAediting_253766	chr2_241757950_+	ncRNA_intronic
CAediting_253767	chr2_241758653_+	ncRNA_intronic
CAediting_253768	chr2_241758655_+	ncRNA_intronic
CAediting_253769	chr2_241758656_+	ncRNA_intronic
CAediting_253770	chr2_241758669_+	ncRNA_intronic
CAediting_253771	chr2_241758673_+	ncRNA_intronic
CAediting_253772	chr2_241758705_+	ncRNA_intronic
CAediting_253773	chr2_241758711_+	ncRNA_intronic
CAediting_253774	chr2_241758860_+	ncRNA_intronic
CAediting_253775	chr2_241758873_+	ncRNA_intronic
CAediting_253776	chr2_241758874_+	ncRNA_intronic
CAediting_253777	chr2_241758902_+	ncRNA_intronic
CAediting_253778	chr2_241758906_+	ncRNA_intronic
CAediting_253779	chr2_241758913_+	ncRNA_intronic
CAediting_253780	chr2_241758915_+	ncRNA_intronic
CAediting_253781	chr2_241761265_+	ncRNA_intronic
CAediting_253782	chr2_241761267_+	ncRNA_intronic
CAediting_253783	chr2_241761284_+	ncRNA_intronic
CAediting_253784	chr2_241761305_+	ncRNA_intronic
CAediting_253785	chr2_241761306_+	ncRNA_intronic
CAediting_253786	chr2_241761307_+	ncRNA_intronic
CAediting_253787	chr2_241761368_+	ncRNA_intronic
CAediting_253788	chr2_241761377_+	ncRNA_intronic
CAediting_253789	chr2_241761381_+	ncRNA_intronic
CAediting_253790	chr2_241761392_+	ncRNA_intronic
CAediting_253791	chr2_241761484_+	ncRNA_intronic
CAediting_253792	chr2_241761489_+	ncRNA_intronic
CAediting_253793	chr2_241762255_+	ncRNA_intronic
CAediting_253794	chr2_241762269_+	ncRNA_intronic
CAediting_253795	chr2_241762274_+	ncRNA_intronic
CAediting_253796	chr2_241762294_+	ncRNA_intronic
CAediting_253797	chr2_241762301_+	ncRNA_intronic
CAediting_253798	chr2_241762322_+	ncRNA_intronic
CAediting_253799	chr2_241762332_+	ncRNA_intronic
CAediting_253800	chr2_241762339_+	ncRNA_intronic
CAediting_253801	chr2_241763753_+	ncRNA_intronic
CAediting_253802	chr2_241763757_+	ncRNA_intronic
CAediting_253803	chr2_241763774_+	ncRNA_intronic
CAediting_253804	chr2_241763780_+	ncRNA_intronic
CAediting_253805	chr2_241763791_+	ncRNA_intronic
CAediting_253806	chr2_241763792_+	ncRNA_intronic
CAediting_253807	chr2_241763797_+	ncRNA_intronic
CAediting_253808	chr2_241763820_+	ncRNA_intronic
CAediting_253809	chr2_241763828_+	ncRNA_intronic
CAediting_253810	chr2_241763829_+	ncRNA_intronic
CAediting_253811	chr2_241763893_+	ncRNA_intronic
CAediting_253812	chr2_241763921_+	ncRNA_intronic
CAediting_253813	chr2_241763929_+	ncRNA_intronic
CAediting_253814	chr2_241763943_+	ncRNA_intronic
CAediting_253815	chr2_241763946_+	ncRNA_intronic
CAediting_253816	chr2_241763950_+	ncRNA_intronic
CAediting_253817	chr2_241763952_+	ncRNA_intronic
CAediting_253818	chr2_241763959_+	ncRNA_intronic
CAediting_253819	chr2_241764001_+	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_253617	chr2_241736135_+	SINE	Alu	AluJr
CAediting_253618	chr2_241737705_+	SINE	Alu	AluJb
CAediting_253619	chr2_241737726_+	SINE	Alu	AluJb
CAediting_253620	chr2_241746458_+	LINE	L1	L1MEd
CAediting_253621	chr2_241746498_+	SINE	Alu	AluSz
CAediting_253622	chr2_241746499_+	SINE	Alu	AluSz
CAediting_253623	chr2_241746504_+	SINE	Alu	AluSz
CAediting_253624	chr2_241746520_+	SINE	Alu	AluSz
CAediting_253625	chr2_241746534_+	SINE	Alu	AluSz
CAediting_253626	chr2_241746539_+	SINE	Alu	AluSz
CAediting_253627	chr2_241746544_+	SINE	Alu	AluSz
CAediting_253628	chr2_241746568_+	SINE	Alu	AluSz
CAediting_253629	chr2_241746577_+	SINE	Alu	AluSz
CAediting_253630	chr2_241746578_+	SINE	Alu	AluSz
CAediting_253631	chr2_241746589_+	SINE	Alu	AluSz
CAediting_253632	chr2_241746592_+	SINE	Alu	AluSz
CAediting_253633	chr2_241746607_+	SINE	Alu	AluSz
CAediting_253634	chr2_241746618_+	SINE	Alu	AluSg
CAediting_253635	chr2_241746621_+	SINE	Alu	AluSg
CAediting_253636	chr2_241746634_+	SINE	Alu	AluSg
CAediting_253637	chr2_241746635_+	SINE	Alu	AluSg
CAediting_253638	chr2_241746661_+	SINE	Alu	AluSg
CAediting_253639	chr2_241746711_+	SINE	Alu	AluSg
CAediting_253640	chr2_241746712_+	SINE	Alu	AluSg
CAediting_253641	chr2_241746741_+	SINE	Alu	AluSg
CAediting_253642	chr2_241746777_+	SINE	Alu	AluSg
CAediting_253643	chr2_241746827_+	SINE	Alu	AluSg
CAediting_253644	chr2_241746838_+	SINE	Alu	AluSg
CAediting_253645	chr2_241746987_+	SINE	Alu	AluJo
CAediting_253646	chr2_241746991_+	SINE	Alu	AluJo
CAediting_253647	chr2_241746992_+	SINE	Alu	AluJo
CAediting_253648	chr2_241747017_+	SINE	Alu	AluJo
CAediting_253649	chr2_241747018_+	SINE	Alu	AluJo
CAediting_253650	chr2_241747064_+	SINE	Alu	AluJo
CAediting_253651	chr2_241747067_+	SINE	Alu	AluJo
CAediting_253652	chr2_241747077_+	SINE	Alu	AluJo
CAediting_253653	chr2_241747090_+	SINE	Alu	AluJo
CAediting_253654	chr2_241747093_+	SINE	Alu	AluJo
CAediting_253655	chr2_241747128_+	SINE	Alu	AluJo
CAediting_253656	chr2_241747131_+	SINE	Alu	AluJo
CAediting_253657	chr2_241747143_+	SINE	Alu	AluJo
CAediting_253658	chr2_241747156_+	SINE	Alu	AluJo
CAediting_253659	chr2_241747168_+	SINE	Alu	AluJo
CAediting_253660	chr2_241747182_+	SINE	Alu	AluJo
CAediting_253661	chr2_241747183_+	SINE	Alu	AluJo
CAediting_253662	chr2_241747197_+	SINE	Alu	AluJo
CAediting_253663	chr2_241747586_+	SINE	Alu	AluJo
CAediting_253664	chr2_241747592_+	SINE	Alu	AluJo
CAediting_253665	chr2_241747612_+	SINE	Alu	AluJo
CAediting_253666	chr2_241747624_+	SINE	Alu	AluJo
CAediting_253667	chr2_241747632_+	SINE	Alu	AluJo
CAediting_253668	chr2_241747648_+	SINE	Alu	AluJo
CAediting_253669	chr2_241747655_+	SINE	Alu	AluJo
CAediting_253670	chr2_241747692_+	SINE	Alu	AluJo
CAediting_253671	chr2_241747718_+	SINE	Alu	AluJo
CAediting_253672	chr2_241747747_+	SINE	Alu	AluJo
CAediting_253673	chr2_241747753_+	SINE	Alu	AluJo
CAediting_253674	chr2_241747766_+	SINE	Alu	AluJo
CAediting_253675	chr2_241747772_+	SINE	Alu	AluJo
CAediting_253676	chr2_241747784_+	SINE	Alu	AluJo
CAediting_253677	chr2_241747792_+	SINE	Alu	AluJo
CAediting_253678	chr2_241747797_+	SINE	Alu	AluJo
CAediting_253679	chr2_241747798_+	SINE	Alu	AluJo
CAediting_253680	chr2_241747799_+	SINE	Alu	AluJo
CAediting_253681	chr2_241747801_+	SINE	Alu	AluJo
CAediting_253682	chr2_241747823_+	SINE	Alu	AluJo
CAediting_253683	chr2_241747824_+	SINE	Alu	AluJo
CAediting_253684	chr2_241747825_+	SINE	Alu	AluJo
CAediting_253685	chr2_241747837_+	SINE	Alu	AluJo
CAediting_253686	chr2_241747839_+	SINE	Alu	AluJo
CAediting_253687	chr2_241748144_+	SINE	Alu	AluSx1
CAediting_253688	chr2_241748152_+	SINE	Alu	AluSx1
CAediting_253689	chr2_241748161_+	SINE	Alu	AluSx1
CAediting_253690	chr2_241748185_+	SINE	Alu	AluSx1
CAediting_253691	chr2_241748186_+	SINE	Alu	AluSx1
CAediting_253692	chr2_241748238_+	SINE	Alu	AluSx1
CAediting_253693	chr2_241748247_+	SINE	Alu	AluSx1
CAediting_253694	chr2_241748250_+	SINE	Alu	AluSx1
CAediting_253695	chr2_241748260_+	SINE	Alu	AluSx1
CAediting_253696	chr2_241748282_+	SINE	Alu	AluSx1
CAediting_253697	chr2_241748286_+	SINE	Alu	AluSx1
CAediting_253698	chr2_241748301_+	SINE	Alu	AluSx1
CAediting_253699	chr2_241748304_+	SINE	Alu	AluSx1
CAediting_253700	chr2_241748306_+	SINE	Alu	AluSx1
CAediting_253701	chr2_241748330_+	SINE	Alu	AluSx1
CAediting_253702	chr2_241748355_+	SINE	Alu	AluSx1
CAediting_253703	chr2_241748356_+	SINE	Alu	AluSx1
CAediting_253704	chr2_241748383_+	SINE	Alu	AluSx1
CAediting_253705	chr2_241748395_+	SINE	Alu	AluSx1
CAediting_253706	chr2_241750897_+	SINE	Alu	AluSx1
CAediting_253707	chr2_241751010_+	SINE	Alu	AluSx1
CAediting_253708	chr2_241753869_+	LINE	L2	L2b
CAediting_253709	chr2_241754077_+	LINE	L2	L2b
CAediting_253711	chr2_241754371_+	SINE	Alu	FLAM_C
CAediting_253712	chr2_241754388_+	SINE	Alu	FLAM_C
CAediting_253713	chr2_241754389_+	SINE	Alu	FLAM_C
CAediting_253714	chr2_241754394_+	SINE	Alu	FLAM_C
CAediting_253715	chr2_241754411_+	SINE	Alu	FLAM_C
CAediting_253716	chr2_241754412_+	SINE	Alu	FLAM_C
CAediting_253717	chr2_241754415_+	SINE	Alu	FLAM_C
CAediting_253718	chr2_241754424_+	SINE	Alu	FLAM_C
CAediting_253719	chr2_241754443_+	SINE	Alu	FLAM_C
CAediting_253720	chr2_241754448_+	SINE	Alu	FLAM_C
CAediting_253721	chr2_241754647_+	SINE	Alu	AluJr
CAediting_253722	chr2_241754704_+	SINE	Alu	AluJr
CAediting_253723	chr2_241754707_+	SINE	Alu	AluJr
CAediting_253724	chr2_241754721_+	SINE	Alu	AluJr
CAediting_253725	chr2_241754730_+	SINE	Alu	AluJr
CAediting_253726	chr2_241754733_+	SINE	Alu	AluJr
CAediting_253728	chr2_241756540_+	SINE	Alu	AluSq2
CAediting_253729	chr2_241756552_+	SINE	Alu	AluSq2
CAediting_253730	chr2_241756585_+	SINE	Alu	AluSq2
CAediting_253731	chr2_241756596_+	SINE	Alu	AluSq2
CAediting_253732	chr2_241756601_+	SINE	Alu	AluSq2
CAediting_253733	chr2_241756621_+	SINE	Alu	AluSq2
CAediting_253734	chr2_241756622_+	SINE	Alu	AluSq2
CAediting_253735	chr2_241756625_+	SINE	Alu	AluSq2
CAediting_253736	chr2_241756626_+	SINE	Alu	AluSq2
CAediting_253737	chr2_241756661_+	SINE	Alu	AluSq2
CAediting_253738	chr2_241756671_+	SINE	Alu	AluSq2
CAediting_253739	chr2_241756687_+	SINE	Alu	AluSq2
CAediting_253740	chr2_241756688_+	SINE	Alu	AluSq2
CAediting_253741	chr2_241756705_+	SINE	Alu	AluSq2
CAediting_253742	chr2_241756744_+	SINE	Alu	AluSq2
CAediting_253743	chr2_241756769_+	SINE	Alu	AluSq2
CAediting_253744	chr2_241756783_+	SINE	Alu	AluSq2
CAediting_253745	chr2_241756784_+	SINE	Alu	AluSq2
CAediting_253747	chr2_241757680_+	SINE	Alu	AluSq2
CAediting_253748	chr2_241757702_+	SINE	Alu	AluSq2
CAediting_253749	chr2_241757703_+	SINE	Alu	AluSq2
CAediting_253750	chr2_241757738_+	SINE	Alu	AluSq2
CAediting_253751	chr2_241757743_+	SINE	Alu	AluSq2
CAediting_253752	chr2_241757772_+	SINE	Alu	AluSq2
CAediting_253753	chr2_241757777_+	SINE	Alu	AluSq2
CAediting_253754	chr2_241757782_+	SINE	Alu	AluSq2
CAediting_253755	chr2_241757796_+	SINE	Alu	AluSq2
CAediting_253756	chr2_241757797_+	SINE	Alu	AluSq2
CAediting_253757	chr2_241757798_+	SINE	Alu	AluSq2
CAediting_253758	chr2_241757812_+	SINE	Alu	AluSq2
CAediting_253759	chr2_241757813_+	SINE	Alu	AluSq2
CAediting_253760	chr2_241757828_+	SINE	Alu	AluSq2
CAediting_253761	chr2_241757839_+	SINE	Alu	AluSq2
CAediting_253762	chr2_241757844_+	SINE	Alu	AluSq2
CAediting_253763	chr2_241757900_+	SINE	Alu	AluSq2
CAediting_253764	chr2_241757909_+	SINE	Alu	AluSq2
CAediting_253765	chr2_241757916_+	SINE	Alu	AluSq2
CAediting_253766	chr2_241757950_+	SINE	Alu	AluSq2
CAediting_253767	chr2_241758653_+	SINE	Alu	AluJb
CAediting_253768	chr2_241758655_+	SINE	Alu	AluJb
CAediting_253769	chr2_241758656_+	SINE	Alu	AluJb
CAediting_253770	chr2_241758669_+	SINE	Alu	AluJb
CAediting_253771	chr2_241758673_+	SINE	Alu	AluJb
CAediting_253772	chr2_241758705_+	SINE	Alu	AluJb
CAediting_253773	chr2_241758711_+	SINE	Alu	AluJb
CAediting_253774	chr2_241758860_+	SINE	Alu	AluJo
CAediting_253775	chr2_241758873_+	SINE	Alu	AluJo
CAediting_253776	chr2_241758874_+	SINE	Alu	AluJo
CAediting_253777	chr2_241758902_+	SINE	Alu	AluJo
CAediting_253778	chr2_241758906_+	SINE	Alu	AluJo
CAediting_253779	chr2_241758913_+	SINE	Alu	AluJo
CAediting_253780	chr2_241758915_+	SINE	Alu	AluJo
CAediting_253781	chr2_241761265_+	SINE	Alu	AluSq
CAediting_253782	chr2_241761267_+	SINE	Alu	AluSq
CAediting_253783	chr2_241761284_+	SINE	Alu	AluSq
CAediting_253784	chr2_241761305_+	SINE	Alu	AluSq
CAediting_253785	chr2_241761306_+	SINE	Alu	AluSq
CAediting_253786	chr2_241761307_+	SINE	Alu	AluSq
CAediting_253787	chr2_241761368_+	SINE	Alu	AluSq
CAediting_253788	chr2_241761377_+	SINE	Alu	AluSq
CAediting_253789	chr2_241761381_+	SINE	Alu	AluSq
CAediting_253790	chr2_241761392_+	SINE	Alu	AluSq
CAediting_253791	chr2_241761484_+	SINE	Alu	AluSq
CAediting_253792	chr2_241761489_+	SINE	Alu	AluSq
CAediting_253793	chr2_241762255_+	SINE	Alu	AluSg
CAediting_253794	chr2_241762269_+	SINE	Alu	AluSg
CAediting_253795	chr2_241762274_+	SINE	Alu	AluSg
CAediting_253796	chr2_241762294_+	SINE	Alu	AluSg
CAediting_253797	chr2_241762301_+	SINE	Alu	AluSg
CAediting_253798	chr2_241762322_+	SINE	Alu	AluSg
CAediting_253799	chr2_241762332_+	SINE	Alu	AluSg
CAediting_253800	chr2_241762339_+	SINE	Alu	AluSg
CAediting_253801	chr2_241763753_+	SINE	Alu	AluJr
CAediting_253802	chr2_241763757_+	SINE	Alu	AluJr
CAediting_253803	chr2_241763774_+	SINE	Alu	AluJr
CAediting_253804	chr2_241763780_+	SINE	Alu	AluJr
CAediting_253805	chr2_241763791_+	SINE	Alu	AluJr
CAediting_253806	chr2_241763792_+	SINE	Alu	AluJr
CAediting_253807	chr2_241763797_+	SINE	Alu	AluJr
CAediting_253808	chr2_241763820_+	SINE	Alu	AluJr
CAediting_253809	chr2_241763828_+	SINE	Alu	AluJr
CAediting_253810	chr2_241763829_+	SINE	Alu	AluJr
CAediting_253811	chr2_241763893_+	SINE	Alu	AluJr
CAediting_253812	chr2_241763921_+	SINE	Alu	AluJr
CAediting_253813	chr2_241763929_+	SINE	Alu	AluJr
CAediting_253814	chr2_241763943_+	SINE	Alu	AluJr
CAediting_253815	chr2_241763946_+	SINE	Alu	AluJr
CAediting_253816	chr2_241763950_+	SINE	Alu	AluJr
CAediting_253817	chr2_241763952_+	SINE	Alu	AluJr
CAediting_253818	chr2_241763959_+	SINE	Alu	AluJr
CAediting_253819	chr2_241764001_+	SINE	Alu	AluJr

Top

RNA A-to-I editing events in the alternative splicing sites for D2HGDH

RNA A-to-I editing(s) in the alternative splicing sites.

AStype	CAeditomID	Editing position	AS position	AS direction	Exonic location	Wildtype sequence	Wildtype splicing strength	RNA edited sequence	RNA edited splicing strength
ES	CAediting_253663	chr2_241747586_+	241747569:241747591	3SS	0+3i	TCTTCTGTATTTTTTTGAGAGAC	-7.97	TCTTCTGTATTTTTTTGGGAGAC	-15.6
ES	CAediting_253665	chr2_241747612_+	241747593:241747615	3SS	0+1i	AGGTCTCACTCTGTCATCCAGGC	-9.07	AGGTCTCACTCTGTCATCCGGGC	-0.32
ES	CAediting_253709	chr2_241754077_+	241754058:241754080	3SS	0+1i	CGCGTGCCTGCCATGTTCTAGAA	-8.89	CGCGTGCCTGCCATGTTCTGGAA	-0.14
IR	CAediting_253709	chr2_241754077_+	241754058:241754080	3SS	0+1i	CGCGTGCCTGCCATGTTCTAGAA	-8.89	CGCGTGCCTGCCATGTTCTGGAA	-0.14
MEX_2	CAediting_253709	chr2_241754077_+	241754058:241754080	3SS	0+1i	CGCGTGCCTGCCATGTTCTAGAA	-8.89	CGCGTGCCTGCCATGTTCTGGAA	-0.14

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000180902.15.D2HGDH.

Correlation between RNA A-to-I editing and PSI for ENSG00000180902.15.D2HGDH.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for D2HGDH

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

ESCA.CAediting_253635.ENSG00000180902.D2HGDH.png
Soverview

Top

Protein coding region RNA A-to-I editings for D2HGDH

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

Top

The effects of the RNA editing to the miRNA binding sites for D2HGDH

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_253721	chr2_241754647_+	ENSG00000180902.15	ENST00000436747	hsa-miR-3940-3p	241754644	241754650	7mer-m8	241754630	241754651	148.00	-21.07
CAediting_253722	chr2_241754704_+	ENSG00000180902.15	ENST00000436747	hsa-miR-1199-5p	241754697	241754703	7mer-m8	241754685	241754704	156.00	-31.03
CAediting_253722	chr2_241754704_+	ENSG00000180902.15	ENST00000436747	hsa-miR-6751-3p	241754697	241754703	7mer-m8	241754684	241754704	141.00	-13.50
CAediting_253726	chr2_241754733_+	ENSG00000180902.15	ENST00000436747	hsa-miR-3157-5p	241754731	241754737	7mer-m8	241754720	241754738	142.00	-16.32
CAediting_253726	chr2_241754733_+	ENSG00000180902.15	ENST00000436747	hsa-miR-4691-3p	241754730	241754737	8mer-1a	241754711	241754737	152.00	-25.17
CAediting_253725	chr2_241754730_+	ENSG00000180902.15	ENST00000436747	hsa-miR-1247-3p	241754724	241754730	7mer-m8	241754709	241754731	160.00	-26.03

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_253724	chr2_241754721_+	ENSG00000180902.15	ENST00000436747	hsa-miR-3929	241754718	241754724	7mer-m8	241754703	241754725	154	-19.81
CAediting_253724	chr2_241754721_+	ENSG00000180902.15	ENST00000436747	hsa-miR-4478	241754718	241754724	7mer-m8	241754709	241754725	151	-27.41
CAediting_253724	chr2_241754721_+	ENSG00000180902.15	ENST00000436747	hsa-miR-4649-3p	241754715	241754721	7mer-m8	241754702	241754722	140	-13.09
CAediting_253726	chr2_241754733_+	ENSG00000180902.15	ENST00000436747	hsa-miR-5690	241754730	241754737	8mer-1a	241754717	241754737	145	-17.09
CAediting_253721	chr2_241754647_+	ENSG00000180902.15	ENST00000436747	hsa-miR-661	241754644	241754649	6mer	241754630	241754650	145	-20.06
CAediting_253724	chr2_241754721_+	ENSG00000180902.15	ENST00000436747	hsa-miR-6765-5p	241754714	241754720	7mer-m8	241754700	241754721	155	-28.33
CAediting_253724	chr2_241754721_+	ENSG00000180902.15	ENST00000436747	hsa-miR-7160-5p	241754716	241754722	7mer-m8	241754703	241754723	147	-22.68

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000180902.15	ENST00000436747	hsa-miR-4477b	241767931	241767937	7mer-m8	241767915	241767938	150	-12.46
CAediting_688080	chr9_63819626_+	ENSG00000180902.15	ENST00000400769	hsa-miR-4477b	241767931	241767937	7mer-m8	241767915	241767938	150	-12.46
CAediting_524911	chr7_5495852_-	ENSG00000180902.15	ENST00000403782	hsa-miR-589-3p	241768617	241768624	8mer-1a	241768602	241768624	149	-21.19
CAediting_1229415	chr17_67471547_+	ENSG00000180902.15	ENST00000436747	hsa-miR-548aa	241744865	241744871	7mer-m8	241744848	241744872	155	-18.84
CAediting_86358	chr1_109598906_+	ENSG00000180902.15	ENST00000436747	hsa-miR-197-5p	241744839	241744846	8mer-1a	241744825	241744846	150	-20.66
CAediting_1368054	chr19_46709310_-	ENSG00000180902.15	ENST00000436747	hsa-miR-320e	241749049	241749055	7mer-m8	241749039	241749056	158	-26.65
CAediting_604450	chr7_133034877_-	ENSG00000180902.15	ENST00000436747	hsa-miR-3654	241749047	241749053	7mer-m8	241749035	241749054	148	-21.29
CAediting_573001	chr7_92204086_-	ENSG00000180902.15	ENST00000436747	hsa-miR-1285-5p	241749323	241749329	7mer-m8	241749310	241749330	140	-24.21
CAediting_524911	chr7_5495852_-	ENSG00000180902.15	ENST00000436747	hsa-miR-589-3p	241768617	241768624	8mer-1a	241768602	241768624	149	-21.19
CAediting_524911	chr7_5495852_-	ENSG00000180902.15	ENST00000400769	hsa-miR-589-3p	241768617	241768624	8mer-1a	241768602	241768624	149	-21.19
CAediting_524911	chr7_5495852_-	ENSG00000180902.15	ENST00000321264	hsa-miR-589-3p	241768617	241768624	8mer-1a	241768602	241768624	149	-21.19
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000403782	hsa-miR-503-5p	241767983	241767989	7mer-1a	241767969	241767989	140	-21.59
CAediting_468389	chr6_31355314_-	ENSG00000180902.15	ENST00000436747	hsa-miR-6891-5p	241755152	241755157	6mer	241755143	241755161	153	-26.94
CAediting_468389	chr6_31355314_-	ENSG00000180902.15	ENST00000436747	hsa-miR-6891-5p	241755154	241755161	8mer-1a	241755143	241755161	153	-26.94
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000436747	hsa-miR-503-5p	241767949	241767955	7mer-m8	241767934	241767956	140	-14.42
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000400769	hsa-miR-503-5p	241767949	241767955	7mer-m8	241767934	241767956	140	-14.42
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000321264	hsa-miR-503-5p	241767983	241767989	7mer-1a	241767969	241767989	140	-21.59

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000403782	hsa-miR-4512	241768125	241768131	7mer-m8	241768111	241768132	140	-17.6
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000403782	hsa-miR-503-5p	241768343	241768348	6mer	241768325	241768349	140	-21.59
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000436747	hsa-miR-4512	241749001	241749007	7mer-m8	241748991	241749008	143	-27.96
CAediting_580943	chr7_100356700_+	ENSG00000180902.15	ENST00000436747	hsa-miR-6840-3p	241749132	241749138	7mer-m8	241749118	241749139	152	-21.39
CAediting_580943	chr7_100356700_+	ENSG00000180902.15	ENST00000436747	hsa-miR-6840-3p	241755642	241755648	7mer-m8	241755626	241755649	147	-25.07
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000436747	hsa-miR-4512	241767907	241767913	7mer-m8	241767893	241767914	140	-21.23
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000436747	hsa-miR-4512	241768125	241768131	7mer-m8	241768111	241768132	140	-17.6
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000436747	hsa-miR-503-5p	241768343	241768348	6mer	241768325	241768349	140	-21.59
CAediting_580943	chr7_100356700_+	ENSG00000180902.15	ENST00000436747	hsa-miR-6840-3p	241767856	241767862	7mer-m8	241767842	241767863	148	-20.17
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000400769	hsa-miR-4512	241767907	241767913	7mer-m8	241767893	241767914	140	-21.23
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000400769	hsa-miR-4512	241768125	241768131	7mer-m8	241768111	241768132	140	-17.6
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000400769	hsa-miR-503-5p	241768343	241768348	6mer	241768325	241768349	140	-21.59
CAediting_580943	chr7_100356700_+	ENSG00000180902.15	ENST00000400769	hsa-miR-6840-3p	241767856	241767862	7mer-m8	241767842	241767863	148	-20.17
CAediting_1054808	chr15_66496985_-	ENSG00000180902.15	ENST00000321264	hsa-miR-4512	241768125	241768131	7mer-m8	241768111	241768132	140	-17.6
CAediting_1524209	chrX_134546392_-	ENSG00000180902.15	ENST00000321264	hsa-miR-503-5p	241768343	241768348	6mer	241768325	241768349	140	-21.59

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for D2HGDH

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST	ENST type	RNA structure without RNA A-to-I editing.	RNA structure with RNA A-to-I editing.
ENST00000436747.4	nonsense_mediated_decay
ENST00000463932.1	processed_transcript
ENST00000468064.4	retained_intron
ENST00000610344.1	protein_coding

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID	ENST	Editing_Position	MFE_withoneAI	MFE_withoutAI	MFE_withmultipleAI
CAediting_253721	ENST00000436747.4	chr2_241754647_+	-2123.90	-2124.60	-2135.20
CAediting_253722	ENST00000436747.4	chr2_241754704_+	-2128.70	-2124.60	-2135.20
CAediting_253723	ENST00000436747.4	chr2_241754707_+	-2127.40	-2124.60	-2135.20
CAediting_253724	ENST00000436747.4	chr2_241754721_+	-2124.60	-2124.60	-2135.20
CAediting_253725	ENST00000436747.4	chr2_241754730_+	-2124.70	-2124.60	-2135.20
CAediting_253726	ENST00000436747.4	chr2_241754733_+	-2128.90	-2124.60	-2135.20
CAediting_253617	ENST00000463932.1	chr2_241736135_+	-326.30	-320.30	-326.30
CAediting_253721	ENST00000468064.4	chr2_241754647_+	-1079.90	-1079.60	-1091.20
CAediting_253722	ENST00000468064.4	chr2_241754704_+	-1083.70	-1079.60	-1091.20
CAediting_253723	ENST00000468064.4	chr2_241754707_+	-1082.40	-1079.60	-1091.20
CAediting_253724	ENST00000468064.4	chr2_241754721_+	-1080.30	-1079.60	-1091.20
CAediting_253725	ENST00000468064.4	chr2_241754730_+	-1081.60	-1079.60	-1091.20
CAediting_253726	ENST00000468064.4	chr2_241754733_+	-1083.90	-1079.60	-1091.20
CAediting_253721	ENST00000610344.1	chr2_241754647_+	-1075.60	-1075.30	-1086.90
CAediting_253722	ENST00000610344.1	chr2_241754704_+	-1079.40	-1075.30	-1086.90
CAediting_253723	ENST00000610344.1	chr2_241754707_+	-1078.10	-1075.30	-1086.90
CAediting_253724	ENST00000610344.1	chr2_241754721_+	-1075.30	-1075.30	-1086.90
CAediting_253725	ENST00000610344.1	chr2_241754730_+	-1076.40	-1075.30	-1086.90
CAediting_253726	ENST00000610344.1	chr2_241754733_+	-1079.60	-1075.30	-1086.90

Top

Relation with ADAR for D2HGDH

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
BRCA	CAediting_253659	chr2_241747168_+	0.000151287096395929	0.2779847908102	.	.	.	.
LUAD	CAediting_253659	chr2_241747168_+	0.00501537660122082	0.29997152601802	.	.	.	.

Top

Relation with cancer stages for D2HGDH

Correlation between Cancer stages and RNA editing frequency

Cancer	Stage_type	CAeditomID	position	P-val	Coeff.
BRCA	pathologic_stage	CAediting_253659	chr2_241747168_+	0.0226919619790822	0.172189977906076

Top

Relation with survival for D2HGDH

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for D2HGDH

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for D2HGDH

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
D2HGDH	C3152055	D-2-HYDROXYGLUTARIC ACIDURIA 1	5	GENOMICS_ENGLAND;ORPHANET;UNIPROT
D2HGDH	C0002514	Amino Acid Metabolism, Inborn Errors	1	CTD_human
D2HGDH	C0750905	Amino Acid Metabolism, Inherited Disorders	1	CTD_human
D2HGDH	C2746066	Combined D-2- and L-2-hydroxyglutaric aciduria	1	CTD_human;GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene