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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TRPS1 (CAeditome ID:7227)

Gene summary for TRPS1

check button Gene summary
Gene informationGene symbol

TRPS1

Gene ID

7227

Gene nametranscriptional repressor GATA binding 1
SynonymsGC79|LGCR
Cytomap

8q23.3

Type of geneprotein-coding
Descriptionzinc finger transcription factor Trps1tricho-rhino-phalangeal syndrome type I proteintrichorhinophalangeal syndrome Izinc finger protein GC79
Modification date20210518
UniProtAcc

Q9UHF7

Context

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TRPS1

GO:0000977

Zinc finger transcription factor Trps1

14680804

TRPS1

GO:0001227

Zinc finger transcription factor Trps1

14680804

TRPS1

GO:0000122

Zinc finger transcription factor Trps1

12885770

TRPS1

GO:0000122

Zinc finger transcription factor Trps1

14680804

TRPS1

GO:0000122

Zinc finger transcription factor Trps1

21673316

TRPS1

GO:0000785

Zinc finger transcription factor Trps1

21673316

TRPS1

GO:0005634

Zinc finger transcription factor Trps1

12885770

TRPS1

GO:0005654

Zinc finger transcription factor Trps1

0000052


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RNA A-to-I events for TRPS1

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000104447.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_657211(115422487, -), CAediting_657212(115422504, -), CAediting_657213(115422527, -), CAediting_657214(115427054, -), CAediting_657215(115427155, -), CAediting_657216(115427217, -), CAediting_657217(115453114, -), CAediting_657218(115453254, -), CAediting_657219(115453298, -), CAediting_657220(115455837, -), CAediting_657221(115455842, -), CAediting_657222(115455845, -), CAediting_657223(115455850, -), CAediting_657224(115455852, -), CAediting_657225(115455857, -), CAediting_657226(115455877, -), CAediting_657227(115455939, -), CAediting_657228(115455949, -), CAediting_657229(115455979, -), CAediting_657230(115455989, -), CAediting_657231(115455990, -), CAediting_657232(115456010, -), CAediting_657233(115456018, -), CAediting_657234(115456021, -), CAediting_657235(115456034, -), CAediting_657236(115456051, -), CAediting_657237(115456056, -), CAediting_657238(115456057, -), CAediting_657239(115456063, -), CAediting_657240(115456072, -), CAediting_657241(115459144, -), CAediting_657242(115459148, -), CAediting_657243(115459170, -), CAediting_657244(115459173, -), CAediting_657245(115459179, -), CAediting_657246(115459194, -), CAediting_657247(115459200, -), CAediting_657248(115459210, -), CAediting_657249(115459227, -), CAediting_657250(115459262, -), CAediting_657251(115459267, -), CAediting_657252(115459277, -), CAediting_657253(115468883, -), CAediting_657254(115468895, -), CAediting_657255(115468936, -), CAediting_657256(115468937, -), CAediting_657257(115468948, -), CAediting_657258(115468969, -), CAediting_657259(115468973, -), CAediting_657260(115469055, -), CAediting_657261(115469065, -), CAediting_657262(115469072, -), CAediting_657263(115469073, -), CAediting_657264(115469079, -), CAediting_657265(115469127, -), CAediting_657266(115469135, -), CAediting_657267(115469521, -), CAediting_657268(115469528, -), CAediting_657269(115469581, -), CAediting_657270(115469595, -), CAediting_657271(115469601, -), CAediting_657272(115469742, -), CAediting_657273(115469747, -), CAediting_657274(115469748, -), CAediting_657275(115469801, -), CAediting_657276(115469802, -), CAediting_657277(115469810, -), CAediting_657278(115483492, -), CAediting_657279(115488465, -), CAediting_657280(115492852, -), CAediting_657281(115492918, -), CAediting_657282(115492932, -), CAediting_657283(115492934, -), CAediting_657284(115492994, -), CAediting_657285(115493435, -), CAediting_657286(115493478, -), CAediting_657287(115493487, -), CAediting_657288(115493488, -), CAediting_657289(115493522, -), CAediting_657290(115498133, -), CAediting_657291(115498148, -), CAediting_657292(115498151, -), CAediting_657293(115498174, -), CAediting_657294(115498184, -), CAediting_657295(115498230, -), CAediting_657296(115498249, -), CAediting_657297(115498255, -), CAediting_657298(115498257, -), CAediting_657299(115498260, -), CAediting_657300(115498261, -), CAediting_657301(115498278, -), CAediting_657302(115498283, -), CAediting_657303(115498296, -), CAediting_657304(115498345, -), CAediting_657305(115500021, -), CAediting_657306(115500036, -), CAediting_657307(115500087, -), CAediting_657308(115500095, -), CAediting_657309(115500097, -), CAediting_657310(115500102, -), CAediting_657311(115500115, -), CAediting_657312(115500126, -), CAediting_657313(115500127, -), CAediting_657314(115500128, -), CAediting_657315(115500141, -), CAediting_657316(115500145, -), CAediting_657317(115500151, -), CAediting_657318(115500158, -), CAediting_657319(115500162, -), CAediting_657320(115500167, -), CAediting_657321(115500168, -), CAediting_657322(115500200, -), CAediting_657323(115500203, -), CAediting_657324(115500206, -), CAediting_657325(115500207, -), CAediting_657326(115500208, -), CAediting_657327(115500209, -), CAediting_657328(115500212, -), CAediting_657329(115500223, -), CAediting_657330(115500233, -), CAediting_657331(115500234, -), CAediting_657332(115500243, -), CAediting_657333(115500246, -), CAediting_657334(115500248, -), CAediting_657335(115500262, -), CAediting_657336(115500265, -), CAediting_657337(115500268, -), CAediting_657338(115500270, -), CAediting_657339(115500279, -), CAediting_657340(115500284, -), CAediting_657341(115500292, -), CAediting_657342(115500295, -), CAediting_657343(115500300, -), CAediting_657344(115500301, -), CAediting_657345(115500307, -), CAediting_657346(115500309, -), CAediting_657347(115500328, -), CAediting_657348(115500330, -), CAediting_657349(115500331, -), CAediting_657350(115500680, -), CAediting_657351(115500702, -), CAediting_657352(115500730, -), CAediting_657353(115500779, -), CAediting_657354(115500815, -), CAediting_657355(115500845, -), CAediting_657356(115500846, -), CAediting_657357(115523491, -), CAediting_657358(115524381, -), CAediting_657359(115524386, -), CAediting_657360(115524417, -), CAediting_657361(115524418, -), CAediting_657362(115524426, -), CAediting_657363(115524432, -), CAediting_657364(115524436, -), CAediting_657365(115524445, -), CAediting_657366(115524449, -), CAediting_657367(115524458, -), CAediting_657368(115524459, -), CAediting_657369(115524467, -), CAediting_657370(115524485, -), CAediting_657371(115524494, -), CAediting_657372(115524500, -), CAediting_657373(115524514, -), CAediting_657374(115524515, -), CAediting_657375(115524524, -), CAediting_657376(115524528, -), CAediting_657377(115524592, -), CAediting_657378(115526140, -), CAediting_657379(115526143, -), CAediting_657380(115526146, -), CAediting_657381(115526160, -), CAediting_657382(115526161, -), CAediting_657383(115526169, -), CAediting_657384(115526171, -), CAediting_657385(115526174, -), CAediting_657386(115526177, -), CAediting_657387(115526187, -), CAediting_657388(115526200, -), CAediting_657389(115526209, -), CAediting_657390(115526224, -), CAediting_657391(115526227, -), CAediting_657392(115526240, -), CAediting_657393(115526257, -), CAediting_657394(115526262, -), CAediting_657395(115534488, -), CAediting_657396(115534523, -), CAediting_657397(115534535, -), CAediting_657398(115534538, -), CAediting_657399(115534541, -), CAediting_657400(115535440, -), CAediting_657401(115536331, -), CAediting_657402(115547958, -), CAediting_657403(115547965, -), CAediting_657404(115547970, -), CAediting_657405(115547974, -), CAediting_657406(115547986, -), CAediting_657407(115547987, -), CAediting_657408(115547995, -), CAediting_657409(115548112, -), CAediting_657410(115548122, -), CAediting_657411(115548165, -), CAediting_657412(115548166, -), CAediting_657413(115548172, -), CAediting_657414(115548187, -), CAediting_657415(115548188, -), CAediting_657416(115548198, -), CAediting_657417(115548200, -), CAediting_657418(115548201, -), CAediting_657419(115548212, -), CAediting_657420(115548225, -), CAediting_657421(115548423, -), CAediting_657422(115548449, -), CAediting_657423(115548462, -), CAediting_657424(115548466, -), CAediting_657425(115548476, -), CAediting_657426(115548549, -), CAediting_657427(115548552, -), CAediting_657428(115548557, -), CAediting_657429(115548558, -), CAediting_657430(115548574, -), CAediting_657431(115548576, -), CAediting_657432(115548580, -), CAediting_657433(115556998, -), CAediting_657434(115556999, -), CAediting_657435(115557065, -), CAediting_657436(115557066, -), CAediting_657437(115557131, -), CAediting_657438(115557139, -), CAediting_657439(115557145, -), CAediting_657440(115557146, -), CAediting_657441(115557153, -), CAediting_657442(115557196, -), CAediting_657443(115557201, -), CAediting_657444(115557211, -), CAediting_657445(115557412, -), CAediting_657446(115557476, -), CAediting_657447(115557503, -), CAediting_657448(115557512, -), CAediting_657449(115557513, -), CAediting_657450(115557525, -), CAediting_657451(115557533, -), CAediting_657452(115557548, -), CAediting_657453(115557549, -), CAediting_657454(115557551, -), CAediting_657455(115557561, -), CAediting_657456(115557627, -), CAediting_657457(115557676, -), CAediting_657458(115557678, -), CAediting_657459(115557695, -), CAediting_657460(115557700, -), CAediting_657461(115557701, -), CAediting_657462(115557718, -), CAediting_657463(115557719, -), CAediting_657464(115557723, -), CAediting_657465(115591072, -), CAediting_657466(115591096, -), CAediting_657467(115591097, -), CAediting_657468(115591105, -), CAediting_657469(115591111, -), CAediting_657470(115591112, -), CAediting_657471(115591118, -), CAediting_657472(115591125, -), CAediting_657473(115591126, -), CAediting_657474(115591131, -), CAediting_657475(115591132, -), CAediting_657476(115591133, -), CAediting_657477(115591134, -), CAediting_657478(115591135, -), CAediting_657479(115591136, -), CAediting_657480(115591139, -), CAediting_657481(115591140, -), CAediting_657482(115591149, -), CAediting_657483(115591163, -), CAediting_657484(115591176, -), CAediting_657485(115591188, -), CAediting_657486(115591196, -), CAediting_657487(115591197, -), CAediting_657488(115591203, -), CAediting_657489(115591208, -), CAediting_657490(115591211, -), CAediting_657491(115591218, -), CAediting_657492(115591232, -), CAediting_657493(115591235, -), CAediting_657494(115591236, -), CAediting_657495(115591260, -), CAediting_657496(115591261, -), CAediting_657497(115591262, -), CAediting_657498(115591404, -), CAediting_657499(115592378, -), CAediting_657500(115592389, -), CAediting_657501(115592398, -), CAediting_657502(115592409, -), CAediting_657503(115592422, -), CAediting_657504(115592436, -), CAediting_657505(115592443, -), CAediting_657506(115592460, -), CAediting_657507(115592473, -), CAediting_657508(115592474, -), CAediting_657509(115592481, -), CAediting_657510(115592489, -), CAediting_657511(115592514, -), CAediting_657512(115608931, -), CAediting_657513(115608962, -), CAediting_657514(115608963, -), CAediting_657515(115609022, -), CAediting_657516(115609024, -), CAediting_657517(115609119, -), CAediting_657518(115639075, -), CAediting_657519(115639093, -), CAediting_657520(115639094, -), CAediting_657521(115639126, -), CAediting_657522(115639140, -), CAediting_657523(115639161, -), CAediting_657524(115639178, -), CAediting_657525(115639179, -), CAediting_657526(115639223, -), CAediting_657527(115639227, -), CAediting_657528(115639228, -), CAediting_657529(115639272, -), CAediting_657530(115639273, -), CAediting_657531(115639348, -), CAediting_657532(115639350, -), CAediting_657533(115639573, -), CAediting_657534(115639694, -), CAediting_657535(115639705, -), CAediting_657536(115639710, -), CAediting_657537(115639717, -), CAediting_657538(115639746, -), CAediting_657539(115639753, -), CAediting_657540(115639815, -), CAediting_657541(115639823, -), CAediting_657542(115639839, -), CAediting_657543(115639843, -), CAediting_657544(115645618, -), CAediting_657545(115645655, -), CAediting_657546(115647890, -), CAediting_657547(115647891, -), CAediting_657548(115647896, -), CAediting_657549(115647897, -), CAediting_657550(115647900, -), CAediting_657551(115647902, -), CAediting_657552(115647926, -), CAediting_657553(115647942, -), CAediting_657554(115647943, -),

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RNA editing positional annotations for TRPS1 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_657211chr8_115422487_-intronic
CAediting_657212chr8_115422504_-intronic
CAediting_657213chr8_115422527_-intronic
CAediting_657214chr8_115427054_-intronic
CAediting_657215chr8_115427155_-intronic
CAediting_657216chr8_115427217_-intronic
CAediting_657217chr8_115453114_-intronic
CAediting_657218chr8_115453254_-intronic
CAediting_657219chr8_115453298_-intronic
CAediting_657220chr8_115455837_-intronic
CAediting_657221chr8_115455842_-intronic
CAediting_657222chr8_115455845_-intronic
CAediting_657223chr8_115455850_-intronic
CAediting_657224chr8_115455852_-intronic
CAediting_657225chr8_115455857_-intronic
CAediting_657226chr8_115455877_-intronic
CAediting_657227chr8_115455939_-intronic
CAediting_657228chr8_115455949_-intronic
CAediting_657229chr8_115455979_-intronic
CAediting_657230chr8_115455989_-intronic
CAediting_657231chr8_115455990_-intronic
CAediting_657232chr8_115456010_-intronic
CAediting_657233chr8_115456018_-intronic
CAediting_657234chr8_115456021_-intronic
CAediting_657235chr8_115456034_-intronic
CAediting_657236chr8_115456051_-intronic
CAediting_657237chr8_115456056_-intronic
CAediting_657238chr8_115456057_-intronic
CAediting_657239chr8_115456063_-intronic
CAediting_657240chr8_115456072_-intronic
CAediting_657241chr8_115459144_-intronic
CAediting_657242chr8_115459148_-intronic
CAediting_657243chr8_115459170_-intronic
CAediting_657244chr8_115459173_-intronic
CAediting_657245chr8_115459179_-intronic
CAediting_657246chr8_115459194_-intronic
CAediting_657247chr8_115459200_-intronic
CAediting_657248chr8_115459210_-intronic
CAediting_657249chr8_115459227_-intronic
CAediting_657250chr8_115459262_-intronic
CAediting_657251chr8_115459267_-intronic
CAediting_657252chr8_115459277_-intronic
CAediting_657253chr8_115468883_-intronic
CAediting_657254chr8_115468895_-intronic
CAediting_657255chr8_115468936_-intronic
CAediting_657256chr8_115468937_-intronic
CAediting_657257chr8_115468948_-intronic
CAediting_657258chr8_115468969_-intronic
CAediting_657259chr8_115468973_-intronic
CAediting_657260chr8_115469055_-intronic
CAediting_657261chr8_115469065_-intronic
CAediting_657262chr8_115469072_-intronic
CAediting_657263chr8_115469073_-intronic
CAediting_657264chr8_115469079_-intronic
CAediting_657265chr8_115469127_-intronic
CAediting_657266chr8_115469135_-intronic
CAediting_657267chr8_115469521_-intronic
CAediting_657268chr8_115469528_-intronic
CAediting_657269chr8_115469581_-intronic
CAediting_657270chr8_115469595_-intronic
CAediting_657271chr8_115469601_-intronic
CAediting_657272chr8_115469742_-intronic
CAediting_657273chr8_115469747_-intronic
CAediting_657274chr8_115469748_-intronic
CAediting_657275chr8_115469801_-intronic
CAediting_657276chr8_115469802_-intronic
CAediting_657277chr8_115469810_-intronic
CAediting_657278chr8_115483492_-intronic
CAediting_657279chr8_115488465_-intronic
CAediting_657280chr8_115492852_-intronic
CAediting_657281chr8_115492918_-intronic
CAediting_657282chr8_115492932_-intronic
CAediting_657283chr8_115492934_-intronic
CAediting_657284chr8_115492994_-intronic
CAediting_657285chr8_115493435_-intronic
CAediting_657286chr8_115493478_-intronic
CAediting_657287chr8_115493487_-intronic
CAediting_657288chr8_115493488_-intronic
CAediting_657289chr8_115493522_-intronic
CAediting_657290chr8_115498133_-intronic
CAediting_657291chr8_115498148_-intronic
CAediting_657292chr8_115498151_-intronic
CAediting_657293chr8_115498174_-intronic
CAediting_657294chr8_115498184_-intronic
CAediting_657295chr8_115498230_-intronic
CAediting_657296chr8_115498249_-intronic
CAediting_657297chr8_115498255_-intronic
CAediting_657298chr8_115498257_-intronic
CAediting_657299chr8_115498260_-intronic
CAediting_657300chr8_115498261_-intronic
CAediting_657301chr8_115498278_-intronic
CAediting_657302chr8_115498283_-intronic
CAediting_657303chr8_115498296_-intronic
CAediting_657304chr8_115498345_-intronic
CAediting_657305chr8_115500021_-intronic
CAediting_657306chr8_115500036_-intronic
CAediting_657307chr8_115500087_-intronic
CAediting_657308chr8_115500095_-intronic
CAediting_657309chr8_115500097_-intronic
CAediting_657310chr8_115500102_-intronic
CAediting_657311chr8_115500115_-intronic
CAediting_657312chr8_115500126_-intronic
CAediting_657313chr8_115500127_-intronic
CAediting_657314chr8_115500128_-intronic
CAediting_657315chr8_115500141_-intronic
CAediting_657316chr8_115500145_-intronic
CAediting_657317chr8_115500151_-intronic
CAediting_657318chr8_115500158_-intronic
CAediting_657319chr8_115500162_-intronic
CAediting_657320chr8_115500167_-intronic
CAediting_657321chr8_115500168_-intronic
CAediting_657322chr8_115500200_-intronic
CAediting_657323chr8_115500203_-intronic
CAediting_657324chr8_115500206_-intronic
CAediting_657325chr8_115500207_-intronic
CAediting_657326chr8_115500208_-intronic
CAediting_657327chr8_115500209_-intronic
CAediting_657328chr8_115500212_-intronic
CAediting_657329chr8_115500223_-intronic
CAediting_657330chr8_115500233_-intronic
CAediting_657331chr8_115500234_-intronic
CAediting_657332chr8_115500243_-intronic
CAediting_657333chr8_115500246_-intronic
CAediting_657334chr8_115500248_-intronic
CAediting_657335chr8_115500262_-intronic
CAediting_657336chr8_115500265_-intronic
CAediting_657337chr8_115500268_-intronic
CAediting_657338chr8_115500270_-intronic
CAediting_657339chr8_115500279_-intronic
CAediting_657340chr8_115500284_-intronic
CAediting_657341chr8_115500292_-intronic
CAediting_657342chr8_115500295_-intronic
CAediting_657343chr8_115500300_-intronic
CAediting_657344chr8_115500301_-intronic
CAediting_657345chr8_115500307_-intronic
CAediting_657346chr8_115500309_-intronic
CAediting_657347chr8_115500328_-intronic
CAediting_657348chr8_115500330_-intronic
CAediting_657349chr8_115500331_-intronic
CAediting_657350chr8_115500680_-intronic
CAediting_657351chr8_115500702_-intronic
CAediting_657352chr8_115500730_-intronic
CAediting_657353chr8_115500779_-intronic
CAediting_657354chr8_115500815_-intronic
CAediting_657355chr8_115500845_-intronic
CAediting_657356chr8_115500846_-intronic
CAediting_657357chr8_115523491_-intronic
CAediting_657358chr8_115524381_-intronic
CAediting_657359chr8_115524386_-intronic
CAediting_657360chr8_115524417_-intronic
CAediting_657361chr8_115524418_-intronic
CAediting_657362chr8_115524426_-intronic
CAediting_657363chr8_115524432_-intronic
CAediting_657364chr8_115524436_-intronic
CAediting_657365chr8_115524445_-intronic
CAediting_657366chr8_115524449_-intronic
CAediting_657367chr8_115524458_-intronic
CAediting_657368chr8_115524459_-intronic
CAediting_657369chr8_115524467_-intronic
CAediting_657370chr8_115524485_-intronic
CAediting_657371chr8_115524494_-intronic
CAediting_657372chr8_115524500_-intronic
CAediting_657373chr8_115524514_-intronic
CAediting_657374chr8_115524515_-intronic
CAediting_657375chr8_115524524_-intronic
CAediting_657376chr8_115524528_-intronic
CAediting_657377chr8_115524592_-intronic
CAediting_657378chr8_115526140_-intronic
CAediting_657379chr8_115526143_-intronic
CAediting_657380chr8_115526146_-intronic
CAediting_657381chr8_115526160_-intronic
CAediting_657382chr8_115526161_-intronic
CAediting_657383chr8_115526169_-intronic
CAediting_657384chr8_115526171_-intronic
CAediting_657385chr8_115526174_-intronic
CAediting_657386chr8_115526177_-intronic
CAediting_657387chr8_115526187_-intronic
CAediting_657388chr8_115526200_-intronic
CAediting_657389chr8_115526209_-intronic
CAediting_657390chr8_115526224_-intronic
CAediting_657391chr8_115526227_-intronic
CAediting_657392chr8_115526240_-intronic
CAediting_657393chr8_115526257_-intronic
CAediting_657394chr8_115526262_-intronic
CAediting_657395chr8_115534488_-intronic
CAediting_657396chr8_115534523_-intronic
CAediting_657397chr8_115534535_-intronic
CAediting_657398chr8_115534538_-intronic
CAediting_657399chr8_115534541_-intronic
CAediting_657400chr8_115535440_-intronic
CAediting_657401chr8_115536331_-intronic
CAediting_657402chr8_115547958_-intronic
CAediting_657403chr8_115547965_-intronic
CAediting_657404chr8_115547970_-intronic
CAediting_657405chr8_115547974_-intronic
CAediting_657406chr8_115547986_-intronic
CAediting_657407chr8_115547987_-intronic
CAediting_657408chr8_115547995_-intronic
CAediting_657409chr8_115548112_-intronic
CAediting_657410chr8_115548122_-intronic
CAediting_657411chr8_115548165_-intronic
CAediting_657412chr8_115548166_-intronic
CAediting_657413chr8_115548172_-intronic
CAediting_657414chr8_115548187_-intronic
CAediting_657415chr8_115548188_-intronic
CAediting_657416chr8_115548198_-intronic
CAediting_657417chr8_115548200_-intronic
CAediting_657418chr8_115548201_-intronic
CAediting_657419chr8_115548212_-intronic
CAediting_657420chr8_115548225_-intronic
CAediting_657421chr8_115548423_-intronic
CAediting_657422chr8_115548449_-intronic
CAediting_657423chr8_115548462_-intronic
CAediting_657424chr8_115548466_-intronic
CAediting_657425chr8_115548476_-intronic
CAediting_657426chr8_115548549_-intronic
CAediting_657427chr8_115548552_-intronic
CAediting_657428chr8_115548557_-intronic
CAediting_657429chr8_115548558_-intronic
CAediting_657430chr8_115548574_-intronic
CAediting_657431chr8_115548576_-intronic
CAediting_657432chr8_115548580_-intronic
CAediting_657433chr8_115556998_-intronic
CAediting_657434chr8_115556999_-intronic
CAediting_657435chr8_115557065_-intronic
CAediting_657436chr8_115557066_-intronic
CAediting_657437chr8_115557131_-intronic
CAediting_657438chr8_115557139_-intronic
CAediting_657439chr8_115557145_-intronic
CAediting_657440chr8_115557146_-intronic
CAediting_657441chr8_115557153_-intronic
CAediting_657442chr8_115557196_-intronic
CAediting_657443chr8_115557201_-intronic
CAediting_657444chr8_115557211_-intronic
CAediting_657445chr8_115557412_-intronic
CAediting_657446chr8_115557476_-intronic
CAediting_657447chr8_115557503_-intronic
CAediting_657448chr8_115557512_-intronic
CAediting_657449chr8_115557513_-intronic
CAediting_657450chr8_115557525_-intronic
CAediting_657451chr8_115557533_-intronic
CAediting_657452chr8_115557548_-intronic
CAediting_657453chr8_115557549_-intronic
CAediting_657454chr8_115557551_-intronic
CAediting_657455chr8_115557561_-intronic
CAediting_657456chr8_115557627_-intronic
CAediting_657457chr8_115557676_-intronic
CAediting_657458chr8_115557678_-intronic
CAediting_657459chr8_115557695_-intronic
CAediting_657460chr8_115557700_-intronic
CAediting_657461chr8_115557701_-intronic
CAediting_657462chr8_115557718_-intronic
CAediting_657463chr8_115557719_-intronic
CAediting_657464chr8_115557723_-intronic
CAediting_657465chr8_115591072_-intronic
CAediting_657466chr8_115591096_-intronic
CAediting_657467chr8_115591097_-intronic
CAediting_657468chr8_115591105_-intronic
CAediting_657469chr8_115591111_-intronic
CAediting_657470chr8_115591112_-intronic
CAediting_657471chr8_115591118_-intronic
CAediting_657472chr8_115591125_-intronic
CAediting_657473chr8_115591126_-intronic
CAediting_657474chr8_115591131_-intronic
CAediting_657475chr8_115591132_-intronic
CAediting_657476chr8_115591133_-intronic
CAediting_657477chr8_115591134_-intronic
CAediting_657478chr8_115591135_-intronic
CAediting_657479chr8_115591136_-intronic
CAediting_657480chr8_115591139_-intronic
CAediting_657481chr8_115591140_-intronic
CAediting_657482chr8_115591149_-intronic
CAediting_657483chr8_115591163_-intronic
CAediting_657484chr8_115591176_-intronic
CAediting_657485chr8_115591188_-intronic
CAediting_657486chr8_115591196_-intronic
CAediting_657487chr8_115591197_-intronic
CAediting_657488chr8_115591203_-intronic
CAediting_657489chr8_115591208_-intronic
CAediting_657490chr8_115591211_-intronic
CAediting_657491chr8_115591218_-intronic
CAediting_657492chr8_115591232_-intronic
CAediting_657493chr8_115591235_-intronic
CAediting_657494chr8_115591236_-intronic
CAediting_657495chr8_115591260_-intronic
CAediting_657496chr8_115591261_-intronic
CAediting_657497chr8_115591262_-intronic
CAediting_657498chr8_115591404_-intronic
CAediting_657499chr8_115592378_-intronic
CAediting_657500chr8_115592389_-intronic
CAediting_657501chr8_115592398_-intronic
CAediting_657502chr8_115592409_-intronic
CAediting_657503chr8_115592422_-intronic
CAediting_657504chr8_115592436_-intronic
CAediting_657505chr8_115592443_-intronic
CAediting_657506chr8_115592460_-intronic
CAediting_657507chr8_115592473_-intronic
CAediting_657508chr8_115592474_-intronic
CAediting_657509chr8_115592481_-intronic
CAediting_657510chr8_115592489_-intronic
CAediting_657511chr8_115592514_-intronic
CAediting_657512chr8_115608931_-intronic
CAediting_657513chr8_115608962_-intronic
CAediting_657514chr8_115608963_-intronic
CAediting_657515chr8_115609022_-intronic
CAediting_657516chr8_115609024_-intronic
CAediting_657517chr8_115609119_-intronic
CAediting_657518chr8_115639075_-intronic
CAediting_657519chr8_115639093_-intronic
CAediting_657520chr8_115639094_-intronic
CAediting_657521chr8_115639126_-intronic
CAediting_657522chr8_115639140_-intronic
CAediting_657523chr8_115639161_-intronic
CAediting_657524chr8_115639178_-intronic
CAediting_657525chr8_115639179_-intronic
CAediting_657526chr8_115639223_-intronic
CAediting_657527chr8_115639227_-intronic
CAediting_657528chr8_115639228_-intronic
CAediting_657529chr8_115639272_-intronic
CAediting_657530chr8_115639273_-intronic
CAediting_657531chr8_115639348_-intronic
CAediting_657532chr8_115639350_-intronic
CAediting_657533chr8_115639573_-intronic
CAediting_657534chr8_115639694_-intronic
CAediting_657535chr8_115639705_-intronic
CAediting_657536chr8_115639710_-intronic
CAediting_657537chr8_115639717_-intronic
CAediting_657538chr8_115639746_-intronic
CAediting_657539chr8_115639753_-intronic
CAediting_657540chr8_115639815_-intronic
CAediting_657541chr8_115639823_-intronic
CAediting_657542chr8_115639839_-intronic
CAediting_657543chr8_115639843_-intronic
CAediting_657544chr8_115645618_-intronic
CAediting_657545chr8_115645655_-intronic
CAediting_657546chr8_115647890_-intronic
CAediting_657547chr8_115647891_-intronic
CAediting_657548chr8_115647896_-intronic
CAediting_657549chr8_115647897_-intronic
CAediting_657550chr8_115647900_-intronic
CAediting_657551chr8_115647902_-intronic
CAediting_657552chr8_115647926_-intronic
CAediting_657553chr8_115647942_-intronic
CAediting_657554chr8_115647943_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_657211chr8_115422487_-SINEAluAluSx1
CAediting_657212chr8_115422504_-SINEAluAluSx1
CAediting_657213chr8_115422527_-SINEAluAluSx1
CAediting_657214chr8_115427054_-SINEAluAluJr
CAediting_657215chr8_115427155_-SINEAluAluJr
CAediting_657216chr8_115427217_-SINEAluAluJr
CAediting_657217chr8_115453114_-SINEAluAluSg7
CAediting_657218chr8_115453254_-SINEAluAluSg7
CAediting_657219chr8_115453298_-SINEAluAluSg7
CAediting_657220chr8_115455837_-SINEAluAluY
CAediting_657221chr8_115455842_-SINEAluAluY
CAediting_657222chr8_115455845_-SINEAluAluY
CAediting_657223chr8_115455850_-SINEAluAluY
CAediting_657224chr8_115455852_-SINEAluAluY
CAediting_657225chr8_115455857_-SINEAluAluY
CAediting_657226chr8_115455877_-SINEAluAluY
CAediting_657227chr8_115455939_-SINEAluAluY
CAediting_657228chr8_115455949_-SINEAluAluY
CAediting_657229chr8_115455979_-SINEAluAluY
CAediting_657230chr8_115455989_-SINEAluAluY
CAediting_657231chr8_115455990_-SINEAluAluY
CAediting_657232chr8_115456010_-SINEAluAluY
CAediting_657233chr8_115456018_-SINEAluAluY
CAediting_657234chr8_115456021_-SINEAluAluY
CAediting_657235chr8_115456034_-SINEAluAluY
CAediting_657236chr8_115456051_-SINEAluAluY
CAediting_657237chr8_115456056_-SINEAluAluY
CAediting_657238chr8_115456057_-SINEAluAluY
CAediting_657239chr8_115456063_-SINEAluAluY
CAediting_657240chr8_115456072_-SINEAluAluY
CAediting_657241chr8_115459144_-SINEAluAluY
CAediting_657242chr8_115459148_-SINEAluAluY
CAediting_657243chr8_115459170_-SINEAluAluY
CAediting_657244chr8_115459173_-SINEAluAluY
CAediting_657245chr8_115459179_-SINEAluAluY
CAediting_657246chr8_115459194_-SINEAluAluY
CAediting_657247chr8_115459200_-SINEAluAluY
CAediting_657248chr8_115459210_-SINEAluAluY
CAediting_657249chr8_115459227_-SINEAluAluY
CAediting_657250chr8_115459262_-SINEAluAluY
CAediting_657251chr8_115459267_-SINEAluAluY
CAediting_657252chr8_115459277_-SINEAluAluY
CAediting_657253chr8_115468883_-SINEAluAluJb
CAediting_657254chr8_115468895_-SINEAluAluJb
CAediting_657255chr8_115468936_-SINEAluAluJb
CAediting_657256chr8_115468937_-SINEAluAluJb
CAediting_657257chr8_115468948_-SINEAluAluJb
CAediting_657258chr8_115468969_-SINEAluAluJb
CAediting_657259chr8_115468973_-SINEAluAluJb
CAediting_657260chr8_115469055_-SINEAluAluJb
CAediting_657261chr8_115469065_-SINEAluAluJb
CAediting_657262chr8_115469072_-SINEAluAluJb
CAediting_657263chr8_115469073_-SINEAluAluJb
CAediting_657264chr8_115469079_-SINEAluAluJb
CAediting_657265chr8_115469127_-SINEAluAluJb
CAediting_657266chr8_115469135_-SINEAluAluJb
CAediting_657267chr8_115469521_-SINEAluAluSx1
CAediting_657268chr8_115469528_-SINEAluAluSx1
CAediting_657269chr8_115469581_-SINEAluAluSx1
CAediting_657270chr8_115469595_-SINEAluAluSx1
CAediting_657271chr8_115469601_-SINEAluAluSx1
CAediting_657272chr8_115469742_-SINEAluAluSx1
CAediting_657273chr8_115469747_-SINEAluAluSx1
CAediting_657274chr8_115469748_-SINEAluAluSx1
CAediting_657275chr8_115469801_-SINEAluAluSx1
CAediting_657276chr8_115469802_-SINEAluAluSx1
CAediting_657277chr8_115469810_-SINEAluAluSx1
CAediting_657278chr8_115483492_-SINEAluAluJb
CAediting_657279chr8_115488465_-SINEAluAluSc
CAediting_657280chr8_115492852_-SINEAluAluSz
CAediting_657281chr8_115492918_-SINEAluAluSz
CAediting_657282chr8_115492932_-SINEAluAluSz
CAediting_657283chr8_115492934_-SINEAluAluSz
CAediting_657284chr8_115492994_-SINEAluAluSz
CAediting_657285chr8_115493435_-SINEAluAluSp
CAediting_657286chr8_115493478_-SINEAluAluSp
CAediting_657287chr8_115493487_-SINEAluAluSp
CAediting_657288chr8_115493488_-SINEAluAluSp
CAediting_657289chr8_115493522_-SINEAluAluSp
CAediting_657290chr8_115498133_-SINEAluAluJb
CAediting_657291chr8_115498148_-SINEAluAluJb
CAediting_657292chr8_115498151_-SINEAluAluJb
CAediting_657293chr8_115498174_-SINEAluAluJb
CAediting_657294chr8_115498184_-SINEAluAluJb
CAediting_657295chr8_115498230_-SINEAluAluJb
CAediting_657296chr8_115498249_-SINEAluAluJb
CAediting_657297chr8_115498255_-SINEAluAluJb
CAediting_657298chr8_115498257_-SINEAluAluJb
CAediting_657299chr8_115498260_-SINEAluAluJb
CAediting_657300chr8_115498261_-SINEAluAluJb
CAediting_657301chr8_115498278_-SINEAluAluJb
CAediting_657302chr8_115498283_-SINEAluAluJb
CAediting_657303chr8_115498296_-SINEAluAluJb
CAediting_657304chr8_115498345_-SINEAluAluJb
CAediting_657306chr8_115500036_-SINEAluAluSg
CAediting_657307chr8_115500087_-SINEAluAluSg
CAediting_657308chr8_115500095_-SINEAluAluSg
CAediting_657309chr8_115500097_-SINEAluAluSg
CAediting_657310chr8_115500102_-SINEAluAluSg
CAediting_657311chr8_115500115_-SINEAluAluSg
CAediting_657312chr8_115500126_-SINEAluAluSg
CAediting_657313chr8_115500127_-SINEAluAluSg
CAediting_657314chr8_115500128_-SINEAluAluSg
CAediting_657315chr8_115500141_-SINEAluAluSg
CAediting_657316chr8_115500145_-SINEAluAluSg
CAediting_657317chr8_115500151_-SINEAluAluSg
CAediting_657318chr8_115500158_-SINEAluAluSg
CAediting_657319chr8_115500162_-SINEAluAluSg
CAediting_657320chr8_115500167_-SINEAluAluSg
CAediting_657321chr8_115500168_-SINEAluAluSg
CAediting_657322chr8_115500200_-SINEAluAluSg
CAediting_657323chr8_115500203_-SINEAluAluSg
CAediting_657324chr8_115500206_-SINEAluAluSg
CAediting_657325chr8_115500207_-SINEAluAluSg
CAediting_657326chr8_115500208_-SINEAluAluSg
CAediting_657327chr8_115500209_-SINEAluAluSg
CAediting_657328chr8_115500212_-SINEAluAluSg
CAediting_657329chr8_115500223_-SINEAluAluSg
CAediting_657330chr8_115500233_-SINEAluAluSg
CAediting_657331chr8_115500234_-SINEAluAluSg
CAediting_657332chr8_115500243_-SINEAluAluSg
CAediting_657333chr8_115500246_-SINEAluAluSg
CAediting_657334chr8_115500248_-SINEAluAluSg
CAediting_657335chr8_115500262_-SINEAluAluSg
CAediting_657336chr8_115500265_-SINEAluAluSg
CAediting_657337chr8_115500268_-SINEAluAluSg
CAediting_657338chr8_115500270_-SINEAluAluSg
CAediting_657339chr8_115500279_-SINEAluAluSg
CAediting_657340chr8_115500284_-SINEAluAluSg
CAediting_657341chr8_115500292_-SINEAluAluSg
CAediting_657342chr8_115500295_-SINEAluAluSg
CAediting_657343chr8_115500300_-SINEAluAluSg
CAediting_657344chr8_115500301_-SINEAluAluSg
CAediting_657345chr8_115500307_-SINEAluAluSg
CAediting_657346chr8_115500309_-SINEAluAluSg
CAediting_657350chr8_115500680_-SINEAluAluY
CAediting_657351chr8_115500702_-SINEAluAluY
CAediting_657352chr8_115500730_-SINEAluAluY
CAediting_657353chr8_115500779_-SINEAluAluY
CAediting_657354chr8_115500815_-SINEAluAluY
CAediting_657355chr8_115500845_-SINEAluAluY
CAediting_657356chr8_115500846_-SINEAluAluY
CAediting_657357chr8_115523491_-SINEAluAluSz6
CAediting_657358chr8_115524381_-SINEAluAluSg
CAediting_657359chr8_115524386_-SINEAluAluSg
CAediting_657360chr8_115524417_-SINEAluAluSg
CAediting_657361chr8_115524418_-SINEAluAluSg
CAediting_657362chr8_115524426_-SINEAluAluSg
CAediting_657363chr8_115524432_-SINEAluAluSg
CAediting_657364chr8_115524436_-SINEAluAluSg
CAediting_657365chr8_115524445_-SINEAluAluSg
CAediting_657366chr8_115524449_-SINEAluAluSg
CAediting_657367chr8_115524458_-SINEAluAluSg
CAediting_657368chr8_115524459_-SINEAluAluSg
CAediting_657369chr8_115524467_-SINEAluAluSg
CAediting_657370chr8_115524485_-SINEAluAluSg
CAediting_657371chr8_115524494_-SINEAluAluSg
CAediting_657372chr8_115524500_-SINEAluAluSg
CAediting_657373chr8_115524514_-SINEAluAluSg
CAediting_657374chr8_115524515_-SINEAluAluSg
CAediting_657375chr8_115524524_-SINEAluAluSg
CAediting_657376chr8_115524528_-SINEAluAluSg
CAediting_657377chr8_115524592_-SINEAluAluSg
CAediting_657378chr8_115526140_-SINEAluAluSx
CAediting_657379chr8_115526143_-SINEAluAluSx
CAediting_657380chr8_115526146_-SINEAluAluSx
CAediting_657381chr8_115526160_-SINEAluAluSx
CAediting_657382chr8_115526161_-SINEAluAluSx
CAediting_657383chr8_115526169_-SINEAluAluSx
CAediting_657384chr8_115526171_-SINEAluAluSx
CAediting_657385chr8_115526174_-SINEAluAluSx
CAediting_657386chr8_115526177_-SINEAluAluSx
CAediting_657387chr8_115526187_-SINEAluAluSx
CAediting_657388chr8_115526200_-SINEAluAluSx
CAediting_657389chr8_115526209_-SINEAluAluSx
CAediting_657390chr8_115526224_-SINEAluAluSx
CAediting_657391chr8_115526227_-SINEAluAluSx
CAediting_657392chr8_115526240_-SINEAluAluSx
CAediting_657393chr8_115526257_-SINEAluAluSx
CAediting_657394chr8_115526262_-SINEAluAluSx
CAediting_657401chr8_115536331_-SINEAluAluY
CAediting_657402chr8_115547958_-SINEAluAluJb
CAediting_657403chr8_115547965_-SINEAluAluJb
CAediting_657404chr8_115547970_-SINEAluAluJb
CAediting_657405chr8_115547974_-SINEAluAluJb
CAediting_657406chr8_115547986_-SINEAluAluJb
CAediting_657407chr8_115547987_-SINEAluAluJb
CAediting_657408chr8_115547995_-SINEAluAluJb
CAediting_657409chr8_115548112_-SINEAluAluJb
CAediting_657410chr8_115548122_-SINEAluAluJb
CAediting_657411chr8_115548165_-SINEAluAluJb
CAediting_657412chr8_115548166_-SINEAluAluJb
CAediting_657413chr8_115548172_-SINEAluAluJb
CAediting_657414chr8_115548187_-SINEAluAluJb
CAediting_657415chr8_115548188_-SINEAluAluJb
CAediting_657416chr8_115548198_-SINEAluAluJb
CAediting_657417chr8_115548200_-SINEAluAluJb
CAediting_657418chr8_115548201_-SINEAluAluJb
CAediting_657419chr8_115548212_-SINEAluAluJb
CAediting_657421chr8_115548423_-SINEAluAluSx1
CAediting_657422chr8_115548449_-SINEAluAluSx1
CAediting_657423chr8_115548462_-SINEAluAluSx1
CAediting_657424chr8_115548466_-SINEAluAluSx1
CAediting_657425chr8_115548476_-SINEAluAluSx1
CAediting_657426chr8_115548549_-SINEAluAluSx1
CAediting_657427chr8_115548552_-SINEAluAluSx1
CAediting_657428chr8_115548557_-SINEAluAluSx1
CAediting_657429chr8_115548558_-SINEAluAluSx1
CAediting_657430chr8_115548574_-SINEAluAluSx1
CAediting_657431chr8_115548576_-SINEAluAluSx1
CAediting_657432chr8_115548580_-SINEAluAluSx1
CAediting_657433chr8_115556998_-LTRERVL-MaLRTHE1B
CAediting_657434chr8_115556999_-LTRERVL-MaLRTHE1B
CAediting_657435chr8_115557065_-LTRERVL-MaLRTHE1B
CAediting_657436chr8_115557066_-LTRERVL-MaLRTHE1B
CAediting_657437chr8_115557131_-LTRERVL-MaLRTHE1B
CAediting_657438chr8_115557139_-LTRERVL-MaLRTHE1B
CAediting_657439chr8_115557145_-LTRERVL-MaLRTHE1B
CAediting_657440chr8_115557146_-LTRERVL-MaLRTHE1B
CAediting_657441chr8_115557153_-LTRERVL-MaLRTHE1B
CAediting_657442chr8_115557196_-LTRERVL-MaLRTHE1B
CAediting_657443chr8_115557201_-LTRERVL-MaLRTHE1B
CAediting_657444chr8_115557211_-LTRERVL-MaLRTHE1B
CAediting_657445chr8_115557412_-LTRERVL-MaLRTHE1C
CAediting_657446chr8_115557476_-LTRERVL-MaLRTHE1C
CAediting_657447chr8_115557503_-LTRERVL-MaLRTHE1C
CAediting_657448chr8_115557512_-LTRERVL-MaLRTHE1C
CAediting_657449chr8_115557513_-LTRERVL-MaLRTHE1C
CAediting_657450chr8_115557525_-LTRERVL-MaLRTHE1C
CAediting_657451chr8_115557533_-LTRERVL-MaLRTHE1C
CAediting_657452chr8_115557548_-LTRERVL-MaLRTHE1C
CAediting_657453chr8_115557549_-LTRERVL-MaLRTHE1C
CAediting_657454chr8_115557551_-LTRERVL-MaLRTHE1C
CAediting_657455chr8_115557561_-LTRERVL-MaLRTHE1C
CAediting_657456chr8_115557627_-LTRERVL-MaLRTHE1C
CAediting_657457chr8_115557676_-LTRERVL-MaLRTHE1C
CAediting_657458chr8_115557678_-LTRERVL-MaLRTHE1C
CAediting_657459chr8_115557695_-LTRERVL-MaLRTHE1C
CAediting_657460chr8_115557700_-LTRERVL-MaLRTHE1C
CAediting_657461chr8_115557701_-LTRERVL-MaLRTHE1C
CAediting_657462chr8_115557718_-LTRERVL-MaLRTHE1C
CAediting_657463chr8_115557719_-LTRERVL-MaLRTHE1C
CAediting_657464chr8_115557723_-LTRERVL-MaLRTHE1C
CAediting_657512chr8_115608931_-SINEAluAluJb
CAediting_657513chr8_115608962_-SINEAluAluJb
CAediting_657514chr8_115608963_-SINEAluAluJb
CAediting_657515chr8_115609022_-SINEAluAluJb
CAediting_657516chr8_115609024_-SINEAluAluJb
CAediting_657517chr8_115609119_-SINEAluAluJb
CAediting_657518chr8_115639075_-SINEAluAluJo
CAediting_657519chr8_115639093_-SINEAluAluJo
CAediting_657520chr8_115639094_-SINEAluAluJo
CAediting_657521chr8_115639126_-SINEAluAluJo
CAediting_657522chr8_115639140_-SINEAluAluJo
CAediting_657523chr8_115639161_-SINEAluAluJo
CAediting_657524chr8_115639178_-SINEAluAluJo
CAediting_657525chr8_115639179_-SINEAluAluJo
CAediting_657526chr8_115639223_-SINEAluAluJo
CAediting_657527chr8_115639227_-SINEAluAluJo
CAediting_657528chr8_115639228_-SINEAluAluJo
CAediting_657529chr8_115639272_-SINEAluAluJo
CAediting_657530chr8_115639273_-SINEAluAluJo
CAediting_657531chr8_115639348_-SINEAluAluJo
CAediting_657532chr8_115639350_-SINEAluAluJo
CAediting_657533chr8_115639573_-SINEAluAluJb
CAediting_657534chr8_115639694_-SINEAluAluJb
CAediting_657535chr8_115639705_-SINEAluAluJb
CAediting_657536chr8_115639710_-SINEAluAluJb
CAediting_657537chr8_115639717_-SINEAluAluJb
CAediting_657538chr8_115639746_-SINEAluAluJb
CAediting_657539chr8_115639753_-SINEAluAluJb
CAediting_657540chr8_115639815_-SINEAluAluJb
CAediting_657541chr8_115639823_-SINEAluAluJb
CAediting_657542chr8_115639839_-SINEAluAluJb
CAediting_657543chr8_115639843_-SINEAluAluJb

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RNA A-to-I editing events in the alternative splicing sites for TRPS1

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000104447.10.TRPS1.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000104447.10.TRPS1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TRPS1

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TRPS1

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TRPS1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_980496chr14_31014685_-ENSG00000104447.10ENST00000395715hsa-miR-624-3p1154101001154101056mer115410099115410118145-17.13
CAediting_1229415chr17_67471547_+ENSG00000104447.10ENST00000395715hsa-miR-548aa1154110741154110796mer115411073115411096141-27.41
CAediting_1368054chr19_46709310_-ENSG00000104447.10ENST00000395715hsa-miR-320e1154107241154107318mer-1a115410724115410741140-15.68
CAediting_117844chr1_162342605_+ENSG00000104447.10ENST00000395715hsa-miR-556-3p1154114051154114117mer-m8115411404115411428154-15.87
CAediting_1524209chrX_134546392_-ENSG00000104447.10ENST00000395715hsa-miR-503-5p1154101041154101096mer115410103115410126146-25.8

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688080chr9_63819626_+ENSG00000104447.10ENST00000395715hsa-miR-4477b1154114711154114777mer-m8115411470115411491150-12.1
CAediting_1229414chr17_67471546_+ENSG00000104447.10ENST00000395715hsa-miR-548aa1154096361154096427mer-m8115409635115409662153-12.26
CAediting_1229415chr17_67471547_+ENSG00000104447.10ENST00000395715hsa-miR-548aa1154096361154096427mer-m8115409635115409662153-12.26
CAediting_1229413chr17_67471544_+ENSG00000104447.10ENST00000395715hsa-miR-548aa1154096361154096427mer-m8115409635115409662153-12.26
CAediting_117844chr1_162342605_+ENSG00000104447.10ENST00000395715hsa-miR-556-3p1154103851154103917mer-m8115410384115410404151-12.31
CAediting_228905chr2_188297554_+ENSG00000104447.10ENST00000395715hsa-miR-561-3p1154129871154129937mer-m8115412986115413011145-8.53
CAediting_228905chr2_188297554_+ENSG00000104447.10ENST00000395715hsa-miR-561-3p1154107401154107478mer-1a115410740115410759152-12.41
CAediting_228905chr2_188297554_+ENSG00000104447.10ENST00000395715hsa-miR-561-3p1154088381154088447mer-m8115408837115408858141-12.14
CAediting_524911chr7_5495852_-ENSG00000104447.10ENST00000395715hsa-miR-589-3p1154104571154104637mer-m8115410456115410479140-9.73
CAediting_524911chr7_5495852_-ENSG00000104447.10ENST00000395715hsa-miR-589-3p1154104571154104637mer-m8115410441115410464140-11.68
CAediting_524911chr7_5495852_-ENSG00000104447.10ENST00000395715hsa-miR-589-3p1154104421154104487mer-m8115410441115410464140-11.68
CAediting_1351755chr19_40282625_-ENSG00000104447.10ENST00000395715hsa-miR-6411154118541154118607mer-m8115411853115411876140-11.3
CAediting_1351755chr19_40282625_-ENSG00000104447.10ENST00000395715hsa-miR-6411154087561154087627mer-m8115408755115408778140-9.96
CAediting_1351755chr19_40282625_-ENSG00000104447.10ENST00000395715hsa-miR-6411154139511154139588mer-1a115413951115413979148-12.33
CAediting_1399425chr20_1392958_-ENSG00000104447.10ENST00000395715hsa-miR-6869-5p1154113721154113787mer-m8115411371115411392150-17.99
CAediting_1399425chr20_1392958_-ENSG00000104447.10ENST00000395715hsa-miR-6869-5p1154085981154086047mer-m8115408597115408619147-18.87

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TRPS1

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TRPS1

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
OVCAediting_657320chr8_115500167_-....0.01824866693516990.205997987573768
UCECCAediting_657321chr8_115500168_-0.00489215271165240.391828152734492....
BRCACAediting_657346chr8_115500309_-..0.01697228882045180.255380415794796..
BRCACAediting_657405chr8_115547974_-0.002254302963297760.41828821341553....
BRCACAediting_657406chr8_115547986_-0.001038327132046050.376174842015235....

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Relation with cancer stages for TRPS1

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_657320chr8_115500167_-0.0168392190552043-0.407204348274743
ESCApathologic_stageCAediting_657315chr8_115500141_-0.0129526704680890.289591940338122
STADpathologic_stageCAediting_657315chr8_115500141_-0.02140083958538150.291755267383162

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Relation with survival for TRPS1

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TRPS1

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TRPS1

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TRPS1C0376634Craniofacial Abnormalities2CTD_human
TRPS1C0432233Trichorhinophalangeal dysplasia type I2CTD_human;GENOMICS_ENGLAND;UNIPROT
TRPS1C1860823Trichorhinophalangeal Syndrome, Type III2CTD_human;GENOMICS_ENGLAND;UNIPROT
TRPS1C0005941Bone Diseases, Developmental1CTD_human
TRPS1C0007097Carcinoma1CTD_human
TRPS1C0023003Langer-Giedion Syndrome1CTD_human;ORPHANET
TRPS1C0024667Animal Mammary Neoplasms1CTD_human
TRPS1C0024668Mammary Neoplasms, Experimental1CTD_human
TRPS1C0205696Anaplastic carcinoma1CTD_human
TRPS1C0205697Carcinoma, Spindle-Cell1CTD_human
TRPS1C0205698Undifferentiated carcinoma1CTD_human
TRPS1C0205699Carcinomatosis1CTD_human
TRPS1C1257925Mammary Carcinoma, Animal1CTD_human