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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TMPRSS2 (CAeditome ID:7113)

Gene summary for TMPRSS2

check button Gene summary
Gene informationGene symbol

TMPRSS2

Gene ID

7113

Gene nametransmembrane serine protease 2
SynonymsPRSS10
Cytomap

21q22.3

Type of geneprotein-coding
Descriptiontransmembrane protease serine 2epitheliasinserine protease 10transmembrane protease, serine 2
Modification date20210531
UniProtAcc

O15393

Context- 34094930(High Expression of ACE2 and TMPRSS2 at the Resection Margin Makes Lung Cancer Survivors Susceptible to SARS-CoV-2 With Unfavorable Prognosis)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TMPRSS2

GO:0006508

Transmembrane protease serine 2

21068237

TMPRSS2

GO:0006508

Transmembrane protease serine 2

24227843

TMPRSS2

GO:0046598

Transmembrane protease serine 2

21068237

TMPRSS2

GO:0046598

Transmembrane protease serine 2

24227843

TMPRSS2

GO:0046598

Transmembrane protease serine 2

32404436

TMPRSS2

GO:0005654

Transmembrane protease serine 2

0000052

TMPRSS2

GO:0005886

Transmembrane protease serine 2

0000052

TMPRSS2

GO:0005886

Transmembrane protease serine 2

21068237


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RNA A-to-I events for TMPRSS2

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000184012.10
boxplot

check button RNA A-to-I editing events in Cancer.
CAediting_1453686(41480681, -), CAediting_1453687(41480696, -), CAediting_1453688(41480699, -), CAediting_1453689(41480711, -), CAediting_1453690(41480735, -), CAediting_1453691(41480736, -), CAediting_1453692(41480741, -), CAediting_1453693(41480744, -), CAediting_1453694(41480750, -), CAediting_1453695(41480754, -), CAediting_1453696(41480767, -), CAediting_1453697(41480771, -), CAediting_1453698(41480776, -), CAediting_1453699(41480777, -), CAediting_1453700(41480802, -), CAediting_1453701(41480803, -), CAediting_1453702(41480814, -), CAediting_1453703(41480826, -), CAediting_1453704(41480831, -), CAediting_1453705(41480832, -), CAediting_1453706(41480851, -), CAediting_1453707(41480856, -), CAediting_1453708(41480857, -), CAediting_1453709(41480865, -), CAediting_1453710(41480875, -), CAediting_1453711(41480884, -), CAediting_1453712(41480892, -), CAediting_1453713(41480894, -), CAediting_1453714(41480911, -), CAediting_1453715(41480919, -), CAediting_1453716(41480926, -), CAediting_1453717(41481790, -), CAediting_1453718(41481806, -), CAediting_1453719(41481818, -), CAediting_1453720(41481819, -), CAediting_1453721(41481820, -), CAediting_1453722(41481846, -), CAediting_1453723(41481858, -), CAediting_1453724(41481860, -), CAediting_1453725(41481865, -), CAediting_1453726(41481871, -), CAediting_1453727(41481896, -), CAediting_1453728(41481899, -), CAediting_1453729(41481912, -), CAediting_1453730(41481913, -), CAediting_1453731(41481921, -), CAediting_1453732(41481923, -), CAediting_1453733(41481939, -), CAediting_1453734(41481949, -), CAediting_1453735(41481952, -), CAediting_1453736(41481953, -), CAediting_1453737(41481961, -), CAediting_1453738(41481974, -), CAediting_1453739(41481975, -), CAediting_1453740(41481978, -), CAediting_1453741(41481979, -), CAediting_1453742(41481992, -), CAediting_1453743(41481998, -), CAediting_1453744(41481999, -), CAediting_1453745(41482004, -), CAediting_1453746(41482009, -), CAediting_1453747(41482014, -), CAediting_1453748(41482023, -), CAediting_1453749(41482028, -), CAediting_1453750(41482035, -), CAediting_1453751(41482059, -), CAediting_1453752(41483300, -), CAediting_1453753(41483380, -), CAediting_1453754(41483395, -), CAediting_1453755(41483408, -), CAediting_1453756(41483412, -), CAediting_1453757(41483421, -), CAediting_1453758(41483422, -), CAediting_1453759(41483430, -), CAediting_1453760(41483447, -), CAediting_1453761(41483452, -), CAediting_1453762(41483506, -), CAediting_1453763(41483568, -), CAediting_1453764(41483873, -), CAediting_1453765(41483885, -), CAediting_1453766(41483886, -), CAediting_1453767(41483913, -), CAediting_1453768(41483956, -), CAediting_1453769(41483995, -), CAediting_1453770(41483997, -), CAediting_1453771(41484007, -), CAediting_1453772(41484008, -), CAediting_1453773(41484009, -), CAediting_1453774(41484010, -), CAediting_1453775(41484069, -), CAediting_1453776(41484097, -), CAediting_1453777(41484112, -), CAediting_1453778(41484113, -), CAediting_1453779(41485381, -), CAediting_1453780(41485389, -), CAediting_1453781(41485391, -), CAediting_1453782(41485413, -), CAediting_1453783(41485427, -), CAediting_1453784(41485430, -), CAediting_1453785(41485454, -), CAediting_1453786(41485466, -), CAediting_1453787(41485480, -), CAediting_1453788(41485483, -), CAediting_1453789(41485501, -), CAediting_1453790(41485509, -), CAediting_1453791(41485511, -), CAediting_1453792(41485514, -), CAediting_1453793(41485525, -), CAediting_1453794(41485549, -), CAediting_1453795(41485555, -), CAediting_1453796(41485562, -), CAediting_1453797(41485566, -), CAediting_1453798(41485567, -), CAediting_1453799(41485605, -), CAediting_1453800(41485609, -), CAediting_1453801(41485616, -), CAediting_1453802(41485623, -), CAediting_1453803(41485635, -), CAediting_1453804(41485643, -), CAediting_1453805(41486322, -), CAediting_1453806(41486335, -), CAediting_1453807(41486402, -), CAediting_1453808(41486411, -), CAediting_1453809(41486421, -), CAediting_1453810(41486428, -), CAediting_1453811(41486432, -), CAediting_1453812(41486438, -), CAediting_1453813(41486464, -), CAediting_1453814(41486473, -), CAediting_1453815(41486476, -), CAediting_1453816(41486479, -), CAediting_1453817(41486482, -), CAediting_1453818(41486493, -), CAediting_1453819(41486494, -), CAediting_1453820(41486503, -), CAediting_1453821(41486513, -), CAediting_1453822(41486565, -), CAediting_1453823(41486570, -), CAediting_1453824(41486571, -), CAediting_1453825(41487889, -), CAediting_1453826(41487895, -), CAediting_1453827(41487898, -), CAediting_1453828(41487925, -), CAediting_1453829(41487930, -), CAediting_1453830(41487931, -), CAediting_1453831(41487952, -), CAediting_1453832(41487957, -), CAediting_1453833(41487961, -), CAediting_1453834(41487971, -), CAediting_1453835(41487972, -), CAediting_1453836(41487975, -), CAediting_1453837(41487986, -), CAediting_1453838(41488011, -), CAediting_1453839(41488049, -), CAediting_1453840(41488065, -), CAediting_1453841(41488066, -), CAediting_1453842(41488088, -), CAediting_1453843(41488705, -), CAediting_1453844(41488735, -), CAediting_1453845(41488740, -), CAediting_1453846(41488762, -), CAediting_1453847(41488776, -), CAediting_1453848(41488802, -), CAediting_1453849(41488887, -), CAediting_1453850(41488891, -), CAediting_1453851(41488899, -), CAediting_1453852(41488900, -), CAediting_1453853(41489885, -), CAediting_1453854(41489897, -), CAediting_1453855(41489903, -), CAediting_1453856(41489904, -), CAediting_1453857(41489913, -), CAediting_1453858(41489930, -), CAediting_1453859(41489985, -), CAediting_1453860(41490048, -), CAediting_1453861(41491187, -), CAediting_1453862(41491188, -), CAediting_1453863(41491191, -), CAediting_1453864(41491194, -), CAediting_1453865(41491195, -), CAediting_1453866(41491225, -), CAediting_1453867(41491229, -), CAediting_1453868(41491233, -), CAediting_1453869(41491249, -), CAediting_1453870(41491264, -), CAediting_1453871(41491265, -), CAediting_1453872(41491271, -), CAediting_1453873(41491289, -), CAediting_1453874(41491317, -), CAediting_1453875(41491340, -), CAediting_1453876(41491350, -), CAediting_1453877(41491363, -), CAediting_1453878(41491365, -), CAediting_1453879(41491384, -), CAediting_1453880(41491392, -), CAediting_1453881(41491411, -), CAediting_1453882(41491414, -), CAediting_1453883(41491426, -), CAediting_1453884(41492032, -), CAediting_1453885(41492081, -), CAediting_1453886(41492093, -), CAediting_1453887(41492110, -), CAediting_1453888(41492167, -), CAediting_1453889(41492171, -), CAediting_1453890(41492185, -), CAediting_1453891(41494751, -), CAediting_1453892(41494886, -), CAediting_1453893(41494897, -), CAediting_1453894(41494912, -), CAediting_1453895(41494920, -), CAediting_1453896(41494921, -), CAediting_1453897(41494925, -), CAediting_1453898(41494969, -), CAediting_1453899(41494986, -), CAediting_1453900(41495012, -), CAediting_1453901(41495017, -), CAediting_1453902(41495513, -), CAediting_1453903(41496906, -), CAediting_1453904(41496908, -), CAediting_1453905(41496909, -), CAediting_1453906(41496913, -), CAediting_1453907(41496926, -), CAediting_1453908(41496937, -), CAediting_1453909(41496943, -), CAediting_1453910(41496946, -), CAediting_1453911(41496952, -), CAediting_1453912(41496956, -), CAediting_1453913(41496973, -), CAediting_1453914(41496978, -), CAediting_1453915(41496979, -), CAediting_1453916(41497005, -), CAediting_1453917(41497014, -), CAediting_1453918(41497017, -), CAediting_1453919(41497018, -), CAediting_1453920(41497023, -), CAediting_1453921(41497035, -), CAediting_1453922(41497045, -), CAediting_1453923(41497083, -), CAediting_1453924(41497087, -), CAediting_1453925(41497108, -), CAediting_1453926(41497112, -), CAediting_1453927(41497146, -), CAediting_1453928(41497154, -), CAediting_1453929(41510951, -),

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RNA editing positional annotations for TMPRSS2 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1453686chr21_41480681_-intronic
CAediting_1453687chr21_41480696_-intronic
CAediting_1453688chr21_41480699_-intronic
CAediting_1453689chr21_41480711_-intronic
CAediting_1453690chr21_41480735_-intronic
CAediting_1453691chr21_41480736_-intronic
CAediting_1453692chr21_41480741_-intronic
CAediting_1453693chr21_41480744_-intronic
CAediting_1453694chr21_41480750_-intronic
CAediting_1453695chr21_41480754_-intronic
CAediting_1453696chr21_41480767_-intronic
CAediting_1453697chr21_41480771_-intronic
CAediting_1453698chr21_41480776_-intronic
CAediting_1453699chr21_41480777_-intronic
CAediting_1453700chr21_41480802_-intronic
CAediting_1453701chr21_41480803_-intronic
CAediting_1453702chr21_41480814_-intronic
CAediting_1453703chr21_41480826_-intronic
CAediting_1453704chr21_41480831_-intronic
CAediting_1453705chr21_41480832_-intronic
CAediting_1453706chr21_41480851_-intronic
CAediting_1453707chr21_41480856_-intronic
CAediting_1453708chr21_41480857_-intronic
CAediting_1453709chr21_41480865_-intronic
CAediting_1453710chr21_41480875_-intronic
CAediting_1453711chr21_41480884_-intronic
CAediting_1453712chr21_41480892_-intronic
CAediting_1453713chr21_41480894_-intronic
CAediting_1453714chr21_41480911_-intronic
CAediting_1453715chr21_41480919_-intronic
CAediting_1453716chr21_41480926_-intronic
CAediting_1453717chr21_41481790_-intronic
CAediting_1453718chr21_41481806_-intronic
CAediting_1453719chr21_41481818_-intronic
CAediting_1453720chr21_41481819_-intronic
CAediting_1453721chr21_41481820_-intronic
CAediting_1453722chr21_41481846_-intronic
CAediting_1453723chr21_41481858_-intronic
CAediting_1453724chr21_41481860_-intronic
CAediting_1453725chr21_41481865_-intronic
CAediting_1453726chr21_41481871_-intronic
CAediting_1453727chr21_41481896_-intronic
CAediting_1453728chr21_41481899_-intronic
CAediting_1453729chr21_41481912_-intronic
CAediting_1453730chr21_41481913_-intronic
CAediting_1453731chr21_41481921_-intronic
CAediting_1453732chr21_41481923_-intronic
CAediting_1453733chr21_41481939_-intronic
CAediting_1453734chr21_41481949_-intronic
CAediting_1453735chr21_41481952_-intronic
CAediting_1453736chr21_41481953_-intronic
CAediting_1453737chr21_41481961_-intronic
CAediting_1453738chr21_41481974_-intronic
CAediting_1453739chr21_41481975_-intronic
CAediting_1453740chr21_41481978_-intronic
CAediting_1453741chr21_41481979_-intronic
CAediting_1453742chr21_41481992_-intronic
CAediting_1453743chr21_41481998_-intronic
CAediting_1453744chr21_41481999_-intronic
CAediting_1453745chr21_41482004_-intronic
CAediting_1453746chr21_41482009_-intronic
CAediting_1453747chr21_41482014_-intronic
CAediting_1453748chr21_41482023_-intronic
CAediting_1453749chr21_41482028_-intronic
CAediting_1453750chr21_41482035_-intronic
CAediting_1453751chr21_41482059_-intronic
CAediting_1453752chr21_41483300_-intronic
CAediting_1453753chr21_41483380_-intronic
CAediting_1453754chr21_41483395_-intronic
CAediting_1453755chr21_41483408_-intronic
CAediting_1453756chr21_41483412_-intronic
CAediting_1453757chr21_41483421_-intronic
CAediting_1453758chr21_41483422_-intronic
CAediting_1453759chr21_41483430_-intronic
CAediting_1453760chr21_41483447_-intronic
CAediting_1453761chr21_41483452_-intronic
CAediting_1453762chr21_41483506_-intronic
CAediting_1453763chr21_41483568_-intronic
CAediting_1453764chr21_41483873_-intronic
CAediting_1453765chr21_41483885_-intronic
CAediting_1453766chr21_41483886_-intronic
CAediting_1453767chr21_41483913_-intronic
CAediting_1453768chr21_41483956_-intronic
CAediting_1453769chr21_41483995_-intronic
CAediting_1453770chr21_41483997_-intronic
CAediting_1453771chr21_41484007_-intronic
CAediting_1453772chr21_41484008_-intronic
CAediting_1453773chr21_41484009_-intronic
CAediting_1453774chr21_41484010_-intronic
CAediting_1453775chr21_41484069_-intronic
CAediting_1453776chr21_41484097_-intronic
CAediting_1453777chr21_41484112_-intronic
CAediting_1453778chr21_41484113_-intronic
CAediting_1453779chr21_41485381_-intronic
CAediting_1453780chr21_41485389_-intronic
CAediting_1453781chr21_41485391_-intronic
CAediting_1453782chr21_41485413_-intronic
CAediting_1453783chr21_41485427_-intronic
CAediting_1453784chr21_41485430_-intronic
CAediting_1453785chr21_41485454_-intronic
CAediting_1453786chr21_41485466_-intronic
CAediting_1453787chr21_41485480_-intronic
CAediting_1453788chr21_41485483_-intronic
CAediting_1453789chr21_41485501_-intronic
CAediting_1453790chr21_41485509_-intronic
CAediting_1453791chr21_41485511_-intronic
CAediting_1453792chr21_41485514_-intronic
CAediting_1453793chr21_41485525_-intronic
CAediting_1453794chr21_41485549_-intronic
CAediting_1453795chr21_41485555_-intronic
CAediting_1453796chr21_41485562_-intronic
CAediting_1453797chr21_41485566_-intronic
CAediting_1453798chr21_41485567_-intronic
CAediting_1453799chr21_41485605_-intronic
CAediting_1453800chr21_41485609_-intronic
CAediting_1453801chr21_41485616_-intronic
CAediting_1453802chr21_41485623_-intronic
CAediting_1453803chr21_41485635_-intronic
CAediting_1453804chr21_41485643_-intronic
CAediting_1453805chr21_41486322_-intronic
CAediting_1453806chr21_41486335_-intronic
CAediting_1453807chr21_41486402_-intronic
CAediting_1453808chr21_41486411_-intronic
CAediting_1453809chr21_41486421_-intronic
CAediting_1453810chr21_41486428_-intronic
CAediting_1453811chr21_41486432_-intronic
CAediting_1453812chr21_41486438_-intronic
CAediting_1453813chr21_41486464_-intronic
CAediting_1453814chr21_41486473_-ncRNA_exonic
CAediting_1453815chr21_41486476_-ncRNA_exonic
CAediting_1453816chr21_41486479_-ncRNA_exonic
CAediting_1453817chr21_41486482_-ncRNA_exonic
CAediting_1453818chr21_41486493_-ncRNA_exonic
CAediting_1453819chr21_41486494_-ncRNA_exonic
CAediting_1453820chr21_41486503_-ncRNA_exonic
CAediting_1453821chr21_41486513_-ncRNA_exonic
CAediting_1453822chr21_41486565_-ncRNA_exonic
CAediting_1453823chr21_41486570_-ncRNA_exonic
CAediting_1453824chr21_41486571_-ncRNA_exonic
CAediting_1453825chr21_41487889_-ncRNA_exonic
CAediting_1453826chr21_41487895_-ncRNA_exonic
CAediting_1453827chr21_41487898_-ncRNA_exonic
CAediting_1453828chr21_41487925_-ncRNA_exonic
CAediting_1453829chr21_41487930_-ncRNA_exonic
CAediting_1453830chr21_41487931_-ncRNA_exonic
CAediting_1453831chr21_41487952_-ncRNA_exonic
CAediting_1453832chr21_41487957_-ncRNA_exonic
CAediting_1453833chr21_41487961_-ncRNA_exonic
CAediting_1453834chr21_41487971_-ncRNA_exonic
CAediting_1453835chr21_41487972_-ncRNA_exonic
CAediting_1453836chr21_41487975_-ncRNA_exonic
CAediting_1453837chr21_41487986_-ncRNA_exonic
CAediting_1453838chr21_41488011_-ncRNA_exonic
CAediting_1453839chr21_41488049_-ncRNA_intronic
CAediting_1453840chr21_41488065_-ncRNA_intronic
CAediting_1453841chr21_41488066_-ncRNA_intronic
CAediting_1453842chr21_41488088_-ncRNA_intronic
CAediting_1453843chr21_41488705_-ncRNA_intronic
CAediting_1453844chr21_41488735_-ncRNA_intronic
CAediting_1453845chr21_41488740_-ncRNA_intronic
CAediting_1453846chr21_41488762_-ncRNA_intronic
CAediting_1453847chr21_41488776_-ncRNA_intronic
CAediting_1453848chr21_41488802_-ncRNA_intronic
CAediting_1453849chr21_41488887_-ncRNA_intronic
CAediting_1453850chr21_41488891_-ncRNA_intronic
CAediting_1453851chr21_41488899_-ncRNA_intronic
CAediting_1453852chr21_41488900_-ncRNA_intronic
CAediting_1453853chr21_41489885_-ncRNA_intronic
CAediting_1453854chr21_41489897_-ncRNA_intronic
CAediting_1453855chr21_41489903_-ncRNA_intronic
CAediting_1453856chr21_41489904_-ncRNA_intronic
CAediting_1453857chr21_41489913_-ncRNA_intronic
CAediting_1453858chr21_41489930_-ncRNA_intronic
CAediting_1453859chr21_41489985_-ncRNA_intronic
CAediting_1453860chr21_41490048_-ncRNA_intronic
CAediting_1453861chr21_41491187_-ncRNA_intronic
CAediting_1453862chr21_41491188_-ncRNA_intronic
CAediting_1453863chr21_41491191_-ncRNA_intronic
CAediting_1453864chr21_41491194_-ncRNA_intronic
CAediting_1453865chr21_41491195_-ncRNA_intronic
CAediting_1453866chr21_41491225_-ncRNA_intronic
CAediting_1453867chr21_41491229_-ncRNA_intronic
CAediting_1453868chr21_41491233_-ncRNA_intronic
CAediting_1453869chr21_41491249_-ncRNA_intronic
CAediting_1453870chr21_41491264_-ncRNA_intronic
CAediting_1453871chr21_41491265_-ncRNA_intronic
CAediting_1453872chr21_41491271_-ncRNA_intronic
CAediting_1453873chr21_41491289_-ncRNA_intronic
CAediting_1453874chr21_41491317_-ncRNA_intronic
CAediting_1453875chr21_41491340_-ncRNA_intronic
CAediting_1453876chr21_41491350_-ncRNA_intronic
CAediting_1453877chr21_41491363_-ncRNA_intronic
CAediting_1453878chr21_41491365_-ncRNA_intronic
CAediting_1453879chr21_41491384_-ncRNA_intronic
CAediting_1453880chr21_41491392_-ncRNA_intronic
CAediting_1453881chr21_41491411_-ncRNA_intronic
CAediting_1453882chr21_41491414_-ncRNA_intronic
CAediting_1453883chr21_41491426_-ncRNA_intronic
CAediting_1453884chr21_41492032_-ncRNA_intronic
CAediting_1453885chr21_41492081_-ncRNA_intronic
CAediting_1453886chr21_41492093_-ncRNA_intronic
CAediting_1453887chr21_41492110_-ncRNA_intronic
CAediting_1453888chr21_41492167_-ncRNA_intronic
CAediting_1453889chr21_41492171_-ncRNA_intronic
CAediting_1453890chr21_41492185_-ncRNA_intronic
CAediting_1453891chr21_41494751_-ncRNA_intronic
CAediting_1453892chr21_41494886_-ncRNA_intronic
CAediting_1453893chr21_41494897_-ncRNA_intronic
CAediting_1453894chr21_41494912_-ncRNA_intronic
CAediting_1453895chr21_41494920_-ncRNA_intronic
CAediting_1453896chr21_41494921_-ncRNA_intronic
CAediting_1453897chr21_41494925_-ncRNA_intronic
CAediting_1453898chr21_41494969_-ncRNA_intronic
CAediting_1453899chr21_41494986_-ncRNA_intronic
CAediting_1453900chr21_41495012_-ncRNA_intronic
CAediting_1453901chr21_41495017_-ncRNA_intronic
CAediting_1453902chr21_41495513_-ncRNA_intronic
CAediting_1453903chr21_41496906_-ncRNA_intronic
CAediting_1453904chr21_41496908_-ncRNA_intronic
CAediting_1453905chr21_41496909_-ncRNA_intronic
CAediting_1453906chr21_41496913_-ncRNA_intronic
CAediting_1453907chr21_41496926_-ncRNA_intronic
CAediting_1453908chr21_41496937_-ncRNA_intronic
CAediting_1453909chr21_41496943_-ncRNA_intronic
CAediting_1453910chr21_41496946_-ncRNA_intronic
CAediting_1453911chr21_41496952_-ncRNA_intronic
CAediting_1453912chr21_41496956_-ncRNA_intronic
CAediting_1453913chr21_41496973_-ncRNA_intronic
CAediting_1453914chr21_41496978_-ncRNA_intronic
CAediting_1453915chr21_41496979_-ncRNA_intronic
CAediting_1453916chr21_41497005_-ncRNA_intronic
CAediting_1453917chr21_41497014_-ncRNA_intronic
CAediting_1453918chr21_41497017_-ncRNA_intronic
CAediting_1453919chr21_41497018_-ncRNA_intronic
CAediting_1453920chr21_41497023_-ncRNA_intronic
CAediting_1453921chr21_41497035_-ncRNA_intronic
CAediting_1453922chr21_41497045_-ncRNA_intronic
CAediting_1453923chr21_41497083_-ncRNA_intronic
CAediting_1453924chr21_41497087_-ncRNA_intronic
CAediting_1453925chr21_41497108_-ncRNA_intronic
CAediting_1453926chr21_41497112_-ncRNA_intronic
CAediting_1453927chr21_41497146_-ncRNA_intronic
CAediting_1453928chr21_41497154_-ncRNA_intronic
CAediting_1453929chr21_41510951_-intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1453686chr21_41480681_-SINEAluAluSx1
CAediting_1453687chr21_41480696_-SINEAluAluSx1
CAediting_1453688chr21_41480699_-SINEAluAluSx1
CAediting_1453689chr21_41480711_-SINEAluAluSx1
CAediting_1453690chr21_41480735_-SINEAluAluSx1
CAediting_1453691chr21_41480736_-SINEAluAluSx1
CAediting_1453692chr21_41480741_-SINEAluAluSx1
CAediting_1453693chr21_41480744_-SINEAluAluSx1
CAediting_1453694chr21_41480750_-SINEAluAluSx1
CAediting_1453695chr21_41480754_-SINEAluAluSx1
CAediting_1453696chr21_41480767_-SINEAluAluSx1
CAediting_1453697chr21_41480771_-SINEAluAluSx1
CAediting_1453698chr21_41480776_-SINEAluAluSx1
CAediting_1453699chr21_41480777_-SINEAluAluSx1
CAediting_1453700chr21_41480802_-SINEAluAluSx1
CAediting_1453701chr21_41480803_-SINEAluAluSx1
CAediting_1453702chr21_41480814_-SINEAluAluSx1
CAediting_1453703chr21_41480826_-SINEAluAluSx1
CAediting_1453704chr21_41480831_-SINEAluAluSx1
CAediting_1453705chr21_41480832_-SINEAluAluSx1
CAediting_1453706chr21_41480851_-SINEAluAluSx1
CAediting_1453707chr21_41480856_-SINEAluAluSx1
CAediting_1453708chr21_41480857_-SINEAluAluSx1
CAediting_1453709chr21_41480865_-SINEAluAluSx1
CAediting_1453710chr21_41480875_-SINEAluAluSx1
CAediting_1453711chr21_41480884_-SINEAluAluSx1
CAediting_1453712chr21_41480892_-SINEAluAluSx1
CAediting_1453713chr21_41480894_-SINEAluAluSx1
CAediting_1453714chr21_41480911_-SINEAluAluSx1
CAediting_1453715chr21_41480919_-SINEAluAluSx1
CAediting_1453716chr21_41480926_-SINEAluAluSx1
CAediting_1453717chr21_41481790_-SINEAluAluSx
CAediting_1453718chr21_41481806_-SINEAluAluSx
CAediting_1453719chr21_41481818_-SINEAluAluSx
CAediting_1453720chr21_41481819_-SINEAluAluSx
CAediting_1453721chr21_41481820_-SINEAluAluSx
CAediting_1453722chr21_41481846_-SINEAluAluSx
CAediting_1453723chr21_41481858_-SINEAluAluSx
CAediting_1453724chr21_41481860_-SINEAluAluSx
CAediting_1453725chr21_41481865_-SINEAluAluSx
CAediting_1453726chr21_41481871_-SINEAluAluSx
CAediting_1453727chr21_41481896_-SINEAluAluSx
CAediting_1453728chr21_41481899_-SINEAluAluSx
CAediting_1453729chr21_41481912_-SINEAluAluSx
CAediting_1453730chr21_41481913_-SINEAluAluSx
CAediting_1453731chr21_41481921_-SINEAluAluSx
CAediting_1453732chr21_41481923_-SINEAluAluSx
CAediting_1453733chr21_41481939_-SINEAluAluSx
CAediting_1453734chr21_41481949_-SINEAluAluSx
CAediting_1453735chr21_41481952_-SINEAluAluSx
CAediting_1453736chr21_41481953_-SINEAluAluSx
CAediting_1453737chr21_41481961_-SINEAluAluSx
CAediting_1453738chr21_41481974_-SINEAluAluSx
CAediting_1453739chr21_41481975_-SINEAluAluSx
CAediting_1453740chr21_41481978_-SINEAluAluSx
CAediting_1453741chr21_41481979_-SINEAluAluSx
CAediting_1453742chr21_41481992_-SINEAluAluSx
CAediting_1453743chr21_41481998_-SINEAluAluSx
CAediting_1453744chr21_41481999_-SINEAluAluSx
CAediting_1453745chr21_41482004_-SINEAluAluSx
CAediting_1453746chr21_41482009_-SINEAluAluSx
CAediting_1453747chr21_41482014_-SINEAluAluSx
CAediting_1453748chr21_41482023_-SINEAluAluSx
CAediting_1453749chr21_41482028_-SINEAluAluSx
CAediting_1453750chr21_41482035_-SINEAluAluSx
CAediting_1453751chr21_41482059_-SINEAluAluSx
CAediting_1453752chr21_41483300_-SINEAluAluSp
CAediting_1453753chr21_41483380_-SINEAluAluSp
CAediting_1453754chr21_41483395_-SINEAluAluSp
CAediting_1453755chr21_41483408_-SINEAluAluSp
CAediting_1453756chr21_41483412_-SINEAluAluSp
CAediting_1453757chr21_41483421_-SINEAluAluSp
CAediting_1453758chr21_41483422_-SINEAluAluSp
CAediting_1453759chr21_41483430_-SINEAluAluSp
CAediting_1453760chr21_41483447_-SINEAluAluSp
CAediting_1453761chr21_41483452_-SINEAluAluSp
CAediting_1453762chr21_41483506_-SINEAluAluSp
CAediting_1453763chr21_41483568_-SINEAluAluSp
CAediting_1453764chr21_41483873_-SINEAluAluJb
CAediting_1453765chr21_41483885_-SINEAluAluJb
CAediting_1453766chr21_41483886_-SINEAluAluJb
CAediting_1453767chr21_41483913_-SINEAluAluJb
CAediting_1453768chr21_41483956_-SINEAluAluJb
CAediting_1453769chr21_41483995_-SINEAluAluJb
CAediting_1453770chr21_41483997_-SINEAluAluJb
CAediting_1453771chr21_41484007_-SINEAluAluJb
CAediting_1453772chr21_41484008_-SINEAluAluJb
CAediting_1453773chr21_41484009_-SINEAluAluJb
CAediting_1453774chr21_41484010_-SINEAluAluJb
CAediting_1453775chr21_41484069_-SINEAluAluJb
CAediting_1453776chr21_41484097_-SINEAluAluJb
CAediting_1453777chr21_41484112_-SINEAluAluJb
CAediting_1453778chr21_41484113_-SINEAluAluJb
CAediting_1453779chr21_41485381_-SINEAluAluJb
CAediting_1453780chr21_41485389_-SINEAluAluJb
CAediting_1453781chr21_41485391_-SINEAluAluJb
CAediting_1453782chr21_41485413_-SINEAluAluJb
CAediting_1453783chr21_41485427_-SINEAluAluJb
CAediting_1453784chr21_41485430_-SINEAluAluJb
CAediting_1453785chr21_41485454_-SINEAluAluJb
CAediting_1453786chr21_41485466_-SINEAluAluJb
CAediting_1453787chr21_41485480_-SINEAluAluJb
CAediting_1453788chr21_41485483_-SINEAluAluJb
CAediting_1453789chr21_41485501_-SINEAluAluJb
CAediting_1453790chr21_41485509_-SINEAluAluJb
CAediting_1453791chr21_41485511_-SINEAluAluJb
CAediting_1453792chr21_41485514_-SINEAluAluJb
CAediting_1453793chr21_41485525_-SINEAluAluJb
CAediting_1453794chr21_41485549_-SINEAluAluJb
CAediting_1453795chr21_41485555_-SINEAluAluJb
CAediting_1453796chr21_41485562_-SINEAluAluJb
CAediting_1453797chr21_41485566_-SINEAluAluJb
CAediting_1453798chr21_41485567_-SINEAluAluJb
CAediting_1453799chr21_41485605_-SINEAluAluJb
CAediting_1453800chr21_41485609_-SINEAluAluJb
CAediting_1453801chr21_41485616_-SINEAluAluJb
CAediting_1453802chr21_41485623_-SINEAluAluJb
CAediting_1453803chr21_41485635_-SINEAluAluJb
CAediting_1453804chr21_41485643_-SINEAluAluJb
CAediting_1453805chr21_41486322_-SINEAluAluSg
CAediting_1453806chr21_41486335_-SINEAluAluSg
CAediting_1453807chr21_41486402_-SINEAluAluSg
CAediting_1453808chr21_41486411_-SINEAluAluSg
CAediting_1453809chr21_41486421_-SINEAluAluSg
CAediting_1453810chr21_41486428_-SINEAluAluSg
CAediting_1453811chr21_41486432_-SINEAluAluSg
CAediting_1453812chr21_41486438_-SINEAluAluSg
CAediting_1453813chr21_41486464_-SINEAluAluSg
CAediting_1453814chr21_41486473_-SINEAluAluSg
CAediting_1453815chr21_41486476_-SINEAluAluSg
CAediting_1453816chr21_41486479_-SINEAluAluSg
CAediting_1453817chr21_41486482_-SINEAluAluSg
CAediting_1453818chr21_41486493_-SINEAluAluSg
CAediting_1453819chr21_41486494_-SINEAluAluSg
CAediting_1453820chr21_41486503_-SINEAluAluSg
CAediting_1453821chr21_41486513_-SINEAluAluSg
CAediting_1453822chr21_41486565_-SINEAluAluSg
CAediting_1453823chr21_41486570_-SINEAluAluSg
CAediting_1453824chr21_41486571_-SINEAluAluSg
CAediting_1453825chr21_41487889_-SINEAluAluSx1
CAediting_1453826chr21_41487895_-SINEAluAluSx1
CAediting_1453827chr21_41487898_-SINEAluAluSx1
CAediting_1453828chr21_41487925_-SINEAluAluSx1
CAediting_1453829chr21_41487930_-SINEAluAluSx1
CAediting_1453830chr21_41487931_-SINEAluAluSx1
CAediting_1453831chr21_41487952_-SINEAluAluSx1
CAediting_1453832chr21_41487957_-SINEAluAluSx1
CAediting_1453833chr21_41487961_-SINEAluAluSx1
CAediting_1453834chr21_41487971_-SINEAluAluSx1
CAediting_1453835chr21_41487972_-SINEAluAluSx1
CAediting_1453836chr21_41487975_-SINEAluAluSx1
CAediting_1453837chr21_41487986_-SINEAluAluSx1
CAediting_1453838chr21_41488011_-SINEAluAluSx1
CAediting_1453839chr21_41488049_-SINEAluAluSx1
CAediting_1453840chr21_41488065_-SINEAluAluSx1
CAediting_1453841chr21_41488066_-SINEAluAluSx1
CAediting_1453842chr21_41488088_-SINEAluAluSx1
CAediting_1453843chr21_41488705_-SINEAluAluSx
CAediting_1453844chr21_41488735_-SINEAluAluSx
CAediting_1453845chr21_41488740_-SINEAluAluSx
CAediting_1453846chr21_41488762_-SINEAluAluSx
CAediting_1453847chr21_41488776_-SINEAluAluSx
CAediting_1453848chr21_41488802_-SINEAluAluSx
CAediting_1453849chr21_41488887_-SINEAluAluSx
CAediting_1453850chr21_41488891_-SINEAluAluSx
CAediting_1453851chr21_41488899_-SINEAluAluSx
CAediting_1453852chr21_41488900_-SINEAluAluSx
CAediting_1453853chr21_41489885_-SINEAluAluSx1
CAediting_1453854chr21_41489897_-SINEAluAluSx1
CAediting_1453855chr21_41489903_-SINEAluAluSx1
CAediting_1453856chr21_41489904_-SINEAluAluSx1
CAediting_1453857chr21_41489913_-SINEAluAluSx1
CAediting_1453858chr21_41489930_-SINEAluAluSx1
CAediting_1453859chr21_41489985_-SINEAluAluSx1
CAediting_1453860chr21_41490048_-SINEAluAluSx1
CAediting_1453861chr21_41491187_-SINEAluAluJb
CAediting_1453862chr21_41491188_-SINEAluAluJb
CAediting_1453863chr21_41491191_-SINEAluAluJb
CAediting_1453864chr21_41491194_-SINEAluAluJb
CAediting_1453865chr21_41491195_-SINEAluAluJb
CAediting_1453866chr21_41491225_-SINEAluAluJb
CAediting_1453867chr21_41491229_-SINEAluAluJb
CAediting_1453868chr21_41491233_-SINEAluAluJb
CAediting_1453869chr21_41491249_-SINEAluAluJb
CAediting_1453870chr21_41491264_-SINEAluAluJb
CAediting_1453871chr21_41491265_-SINEAluAluJb
CAediting_1453872chr21_41491271_-SINEAluAluJb
CAediting_1453873chr21_41491289_-SINEAluAluJb
CAediting_1453874chr21_41491317_-SINEAluAluJb
CAediting_1453875chr21_41491340_-SINEAluAluJb
CAediting_1453876chr21_41491350_-SINEAluAluJb
CAediting_1453877chr21_41491363_-SINEAluAluJb
CAediting_1453878chr21_41491365_-SINEAluAluJb
CAediting_1453879chr21_41491384_-SINEAluAluJb
CAediting_1453880chr21_41491392_-SINEAluAluJb
CAediting_1453881chr21_41491411_-SINEAluAluJb
CAediting_1453882chr21_41491414_-SINEAluAluJb
CAediting_1453883chr21_41491426_-SINEAluAluJb
CAediting_1453884chr21_41492032_-SINEAluAluSx
CAediting_1453885chr21_41492081_-SINEAluAluSx
CAediting_1453886chr21_41492093_-SINEAluAluSx
CAediting_1453887chr21_41492110_-SINEAluAluSx
CAediting_1453888chr21_41492167_-SINEAluAluSx
CAediting_1453889chr21_41492171_-SINEAluAluSx
CAediting_1453890chr21_41492185_-SINEAluAluSx
CAediting_1453892chr21_41494886_-SINEAluAluSc
CAediting_1453893chr21_41494897_-SINEAluAluSc
CAediting_1453894chr21_41494912_-SINEAluAluSc
CAediting_1453895chr21_41494920_-SINEAluAluSc
CAediting_1453896chr21_41494921_-SINEAluAluSc
CAediting_1453897chr21_41494925_-SINEAluAluSc
CAediting_1453898chr21_41494969_-SINEAluAluSc
CAediting_1453899chr21_41494986_-SINEAluAluSc
CAediting_1453900chr21_41495012_-SINEAluAluSc
CAediting_1453901chr21_41495017_-SINEAluAluSc
CAediting_1453902chr21_41495513_-SINEAluAluSq2
CAediting_1453903chr21_41496906_-SINEAluAluSp
CAediting_1453904chr21_41496908_-SINEAluAluSp
CAediting_1453905chr21_41496909_-SINEAluAluSp
CAediting_1453906chr21_41496913_-SINEAluAluSp
CAediting_1453907chr21_41496926_-SINEAluAluSp
CAediting_1453908chr21_41496937_-SINEAluAluSp
CAediting_1453909chr21_41496943_-SINEAluAluSp
CAediting_1453910chr21_41496946_-SINEAluAluSp
CAediting_1453911chr21_41496952_-SINEAluAluSp
CAediting_1453912chr21_41496956_-SINEAluAluSp
CAediting_1453913chr21_41496973_-SINEAluAluSp
CAediting_1453914chr21_41496978_-SINEAluAluSp
CAediting_1453915chr21_41496979_-SINEAluAluSp
CAediting_1453916chr21_41497005_-SINEAluAluSp
CAediting_1453917chr21_41497014_-SINEAluAluSp
CAediting_1453918chr21_41497017_-SINEAluAluSp
CAediting_1453919chr21_41497018_-SINEAluAluSp
CAediting_1453920chr21_41497023_-SINEAluAluSp
CAediting_1453921chr21_41497035_-SINEAluAluSp
CAediting_1453922chr21_41497045_-SINEAluAluSp
CAediting_1453923chr21_41497083_-SINEAluAluSp
CAediting_1453924chr21_41497087_-SINEAluAluSp
CAediting_1453925chr21_41497108_-SINEAluAluSp
CAediting_1453926chr21_41497112_-SINEAluAluSp
CAediting_1453929chr21_41510951_-SINEAluAluJr

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RNA A-to-I editing events in the alternative splicing sites for TMPRSS2

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1453787chr21_41485480_-41485479:414855013SS2+0iAATTTTTGTATTTTTTGTAGAAA7.14AATTTTTGTATTTTTTGTAGAGA6.53
ESCAediting_1453788chr21_41485483_-41485479:414855013SS0+2iAATTTTTGTATTTTTTGTAGAAA7.14AATTTTTGTATTTTTTGTGGAAA-0.82
ESCAediting_1453789chr21_41485501_-41485479:414855013SS0+20iAATTTTTGTATTTTTTGTAGAAA7.14GATTTTTGTATTTTTTGTAGAAA7.35

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000184012.10.TMPRSS2.

check button Correlation between RNA A-to-I editing and PSI for ENSG00000184012.10.TMPRSS2.

Top

Differntial gene expression between RNA A-to-I edited versus non-edited samples for TMPRSS2

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

Top

Protein coding region RNA A-to-I editings for TMPRSS2

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TMPRSS2

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_748296chr10_51299626_+ENSG00000184012.10ENST00000398585hsa-miR-605-3p41465718414657247mer-m84146571741465738140-17.53
CAediting_393chr1_1167164_+ENSG00000184012.10ENST00000398585hsa-miR-200b-3p41464769414647757mer-m84146476841464789151-13.16
CAediting_688081chr9_63819627_+ENSG00000184012.10ENST00000398585hsa-miR-4477b41465945414659517mer-m84146594441465965142-10.14
CAediting_1229415chr17_67471547_+ENSG00000184012.10ENST00000398585hsa-miR-548aa41466006414660127mer-m84146600541466033157-11.81
CAediting_1351755chr19_40282625_-ENSG00000184012.10ENST00000398585hsa-miR-64141465189414651957mer-m84146518841465213152-14.63
CAediting_77128chr1_85133844_+ENSG00000184012.10ENST00000398585hsa-miR-4423-3p41465047414650537mer-m84146504641465066140-17.45
CAediting_442554chr5_154685830_+ENSG00000184012.10ENST00000398585hsa-miR-130341465186414651927mer-m84146518541465206146-18.97
CAediting_468389chr6_31355314_-ENSG00000184012.10ENST00000398585hsa-miR-6891-5p41465413414654208mer-1a4146541341465432159-26.36

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1229413chr17_67471544_+ENSG00000184012.10ENST00000398585hsa-miR-548aa41466086414660927mer-m84146608541466112150-9.28
CAediting_1229415chr17_67471547_+ENSG00000184012.10ENST00000398585hsa-miR-548aa41466086414660927mer-m84146608541466112150-9.28
CAediting_1229414chr17_67471546_+ENSG00000184012.10ENST00000398585hsa-miR-548aa41466086414660927mer-m84146608541466112150-9.28
CAediting_1229414chr17_67471546_+ENSG00000184012.10ENST00000458356hsa-miR-548aa41466086414660927mer-m84146608541466112150-9.28

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TMPRSS2

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TMPRSS2

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)
PRADCAediting_1453770chr21_41483997_-..0.002617031532269610.306979192362507..
PRADCAediting_1453773chr21_41484009_-..0.0004000958251505360.258981406854075..

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Relation with cancer stages for TMPRSS2

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
STADpathologic_stageCAediting_1453698chr21_41480776_-0.0284042775432022-0.285471115996353

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Relation with survival for TMPRSS2

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR

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RelatedDrugs for TMPRSS2

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TMPRSS2

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TMPRSS2C0033578Prostatic Neoplasms4CTD_human
TMPRSS2C0376358Malignant neoplasm of prostate4CTD_human