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Center for Computational Systems Medicine
Soverview

Gene summary

Soverview

RNA A-to-I events

Soverview

Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples

Soverview

Protein coding region RNA A-to-I editings

Soverview

The effects of the RNA editing to the miRNA binding sites

Soverview

The effects of the RNA editing to the stability of the RNA structures

Soverview

Relation with ADAR

Soverview

Relation with cancer stages

Soverview

Relation with survival state

Soverview

Related drugs with this gene

Soverview

Related diseases with this gene

Editing gene: TFE3 (CAeditome ID:7030)

Gene summary for TFE3

check button Gene summary
Gene informationGene symbol

TFE3

Gene ID

7030

Gene nametranscription factor binding to IGHM enhancer 3
SynonymsRCCP2|RCCX1|TFEA|bHLHe33
Cytomap

Xp11.23

Type of geneprotein-coding
Descriptiontranscription factor E3class E basic helix-loop-helix protein 33transcription factor E family, member Atranscription factor for IgH enhancertranscription factor for immunoglobulin heavy-chain enhancer 3
Modification date20210531
UniProtAcc

P19532

Context- 30030118(TFE3 is a diagnostic marker for solid pseudopapillary neoplasms of the pancreas)

check button Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez
GeneGO IDGO termPubMed ID
TFE3

GO:1990837

Transcription factor E3

28473536

TFE3

GO:0005634

Transcription factor E3

22692423

TFE3

GO:0005654

Transcription factor E3

0000052

TFE3

GO:0005737

Transcription factor E3

22692423

TFE3

GO:0005829

Transcription factor E3

0000052


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RNA A-to-I events for TFE3

check buttonRNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.
all structure

check button RNA editing frequencies across 33 cancers of gene: ENSG00000068323.15

check button RNA A-to-I editing events in Cancer.
CAediting_1507180(49030999, -), CAediting_1507181(49033171, -), CAediting_1507182(49034992, -), CAediting_1507183(49035015, -), CAediting_1507184(49035020, -), CAediting_1507185(49035036, -), CAediting_1507186(49035054, -), CAediting_1507187(49035066, -), CAediting_1507188(49035067, -), CAediting_1507189(49035068, -), CAediting_1507190(49035119, -), CAediting_1507191(49035131, -), CAediting_1507192(49035145, -), CAediting_1507193(49035148, -), CAediting_1507194(49035184, -), CAediting_1507195(49035192, -), CAediting_1507196(49035197, -), CAediting_1507197(49035198, -), CAediting_1507198(49035200, -), CAediting_1507199(49035203, -), CAediting_1507200(49035210, -), CAediting_1507201(49035213, -), CAediting_1507202(49035214, -), CAediting_1507203(49035222, -), CAediting_1507204(49035239, -), CAediting_1507205(49035240, -), CAediting_1507206(49035253, -), CAediting_1507207(49035265, -), CAediting_1507208(49035289, -), CAediting_1507209(49035439, -), CAediting_1507210(49035464, -), CAediting_1507211(49035479, -), CAediting_1507212(49035503, -), CAediting_1507213(49035504, -), CAediting_1507214(49035512, -), CAediting_1507215(49035518, -), CAediting_1507216(49035522, -), CAediting_1507217(49035535, -), CAediting_1507218(49035539, -), CAediting_1507219(49035545, -), CAediting_1507220(49035571, -), CAediting_1507221(49035574, -), CAediting_1507222(49035575, -), CAediting_1507223(49035582, -), CAediting_1507224(49035584, -), CAediting_1507225(49035585, -), CAediting_1507226(49035586, -), CAediting_1507227(49035588, -), CAediting_1507228(49035591, -), CAediting_1507229(49035602, -), CAediting_1507230(49035603, -), CAediting_1507231(49035604, -), CAediting_1507232(49035610, -), CAediting_1507233(49035612, -), CAediting_1507234(49035613, -), CAediting_1507235(49035636, -), CAediting_1507236(49035649, -), CAediting_1507237(49035671, -), CAediting_1507238(49035674, -), CAediting_1507239(49035679, -), CAediting_1507240(49035680, -), CAediting_1507241(49035686, -), CAediting_1507242(49035688, -), CAediting_1507243(49035698, -), CAediting_1507244(49035702, -), CAediting_1507245(49035905, -), CAediting_1507246(49035907, -), CAediting_1507247(49035911, -), CAediting_1507248(49035913, -), CAediting_1507249(49035925, -), CAediting_1507250(49035926, -), CAediting_1507251(49035927, -), CAediting_1507252(49035940, -), CAediting_1507253(49035948, -), CAediting_1507254(49035952, -), CAediting_1507255(49035978, -), CAediting_1507256(49035990, -), CAediting_1507257(49035998, -), CAediting_1507258(49036004, -), CAediting_1507259(49036007, -), CAediting_1507260(49036013, -), CAediting_1507261(49036022, -), CAediting_1507262(49036023, -), CAediting_1507263(49036047, -), CAediting_1507264(49036049, -), CAediting_1507265(49036058, -), CAediting_1507266(49036059, -), CAediting_1507267(49036063, -), CAediting_1507268(49036071, -), CAediting_1507269(49036076, -), CAediting_1507270(49036084, -), CAediting_1507271(49036088, -), CAediting_1507272(49036089, -), CAediting_1507273(49036102, -), CAediting_1507274(49036109, -), CAediting_1507275(49036114, -), CAediting_1507276(49036124, -), CAediting_1507277(49036133, -), CAediting_1507278(49036149, -), CAediting_1507279(49036165, -), CAediting_1507280(49036169, -), CAediting_1507281(49036211, -), CAediting_1507282(49036242, -), CAediting_1507283(49036285, -), CAediting_1507284(49036305, -), CAediting_1507285(49036318, -), CAediting_1507286(49036319, -), CAediting_1507287(49036332, -), CAediting_1507288(49036343, -), CAediting_1507289(49036345, -), CAediting_1507290(49036350, -), CAediting_1507291(49036355, -), CAediting_1507292(49036358, -), CAediting_1507293(49036359, -), CAediting_1507294(49036381, -), CAediting_1507295(49036385, -), CAediting_1507296(49036427, -), CAediting_1507297(49036432, -), CAediting_1507298(49036542, -), CAediting_1507299(49036548, -), CAediting_1507300(49036560, -), CAediting_1507301(49036591, -), CAediting_1507302(49036600, -), CAediting_1507303(49036610, -), CAediting_1507304(49036636, -), CAediting_1507305(49036639, -), CAediting_1507306(49036653, -), CAediting_1507307(49036654, -), CAediting_1507308(49036678, -), CAediting_1507309(49036680, -), CAediting_1507310(49036683, -), CAediting_1507311(49036689, -), CAediting_1507312(49036690, -), CAediting_1507313(49036702, -), CAediting_1507314(49036715, -), CAediting_1507315(49036719, -), CAediting_1507316(49036720, -), CAediting_1507317(49036725, -), CAediting_1507318(49036726, -), CAediting_1507319(49036729, -), CAediting_1507320(49036740, -), CAediting_1507321(49036745, -), CAediting_1507322(49036755, -), CAediting_1507323(49036764, -), CAediting_1507324(49036769, -), CAediting_1507325(49037291, -), CAediting_1507326(49037550, -),

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RNA editing positional annotations for TFE3 using Annovar

check button Protein coding RNA editing(s).
CAeditome IDPositionVariant typeENSTNTchangeAAchangeSIFT_scorePolyphen2_HVAR_scorePROVEAN_pred

check button Gene structure information of RNA editing(s).
CAeditome IDPositionVariant type
CAediting_1507180chrX_49030999_-ncRNA_intronic
CAediting_1507181chrX_49033171_-ncRNA_intronic
CAediting_1507182chrX_49034992_-ncRNA_intronic
CAediting_1507183chrX_49035015_-ncRNA_intronic
CAediting_1507184chrX_49035020_-ncRNA_intronic
CAediting_1507185chrX_49035036_-ncRNA_intronic
CAediting_1507186chrX_49035054_-ncRNA_intronic
CAediting_1507187chrX_49035066_-ncRNA_intronic
CAediting_1507188chrX_49035067_-ncRNA_intronic
CAediting_1507189chrX_49035068_-ncRNA_intronic
CAediting_1507190chrX_49035119_-ncRNA_intronic
CAediting_1507191chrX_49035131_-ncRNA_intronic
CAediting_1507192chrX_49035145_-ncRNA_intronic
CAediting_1507193chrX_49035148_-ncRNA_intronic
CAediting_1507194chrX_49035184_-ncRNA_intronic
CAediting_1507195chrX_49035192_-ncRNA_intronic
CAediting_1507196chrX_49035197_-ncRNA_intronic
CAediting_1507197chrX_49035198_-ncRNA_intronic
CAediting_1507198chrX_49035200_-ncRNA_intronic
CAediting_1507199chrX_49035203_-ncRNA_intronic
CAediting_1507200chrX_49035210_-ncRNA_intronic
CAediting_1507201chrX_49035213_-ncRNA_intronic
CAediting_1507202chrX_49035214_-ncRNA_intronic
CAediting_1507203chrX_49035222_-ncRNA_intronic
CAediting_1507204chrX_49035239_-ncRNA_intronic
CAediting_1507205chrX_49035240_-ncRNA_intronic
CAediting_1507206chrX_49035253_-ncRNA_intronic
CAediting_1507207chrX_49035265_-ncRNA_intronic
CAediting_1507208chrX_49035289_-ncRNA_intronic
CAediting_1507209chrX_49035439_-ncRNA_intronic
CAediting_1507210chrX_49035464_-ncRNA_intronic
CAediting_1507211chrX_49035479_-ncRNA_intronic
CAediting_1507212chrX_49035503_-ncRNA_intronic
CAediting_1507213chrX_49035504_-ncRNA_intronic
CAediting_1507214chrX_49035512_-ncRNA_intronic
CAediting_1507215chrX_49035518_-ncRNA_intronic
CAediting_1507216chrX_49035522_-ncRNA_intronic
CAediting_1507217chrX_49035535_-ncRNA_intronic
CAediting_1507218chrX_49035539_-ncRNA_intronic
CAediting_1507219chrX_49035545_-ncRNA_intronic
CAediting_1507220chrX_49035571_-ncRNA_intronic
CAediting_1507221chrX_49035574_-ncRNA_intronic
CAediting_1507222chrX_49035575_-ncRNA_intronic
CAediting_1507223chrX_49035582_-ncRNA_intronic
CAediting_1507224chrX_49035584_-ncRNA_intronic
CAediting_1507225chrX_49035585_-ncRNA_intronic
CAediting_1507226chrX_49035586_-ncRNA_intronic
CAediting_1507227chrX_49035588_-ncRNA_intronic
CAediting_1507228chrX_49035591_-ncRNA_intronic
CAediting_1507229chrX_49035602_-ncRNA_intronic
CAediting_1507230chrX_49035603_-ncRNA_intronic
CAediting_1507231chrX_49035604_-ncRNA_intronic
CAediting_1507232chrX_49035610_-ncRNA_intronic
CAediting_1507233chrX_49035612_-ncRNA_intronic
CAediting_1507234chrX_49035613_-ncRNA_intronic
CAediting_1507235chrX_49035636_-ncRNA_intronic
CAediting_1507236chrX_49035649_-ncRNA_intronic
CAediting_1507237chrX_49035671_-ncRNA_intronic
CAediting_1507238chrX_49035674_-ncRNA_intronic
CAediting_1507239chrX_49035679_-ncRNA_intronic
CAediting_1507240chrX_49035680_-ncRNA_intronic
CAediting_1507241chrX_49035686_-ncRNA_intronic
CAediting_1507242chrX_49035688_-ncRNA_intronic
CAediting_1507243chrX_49035698_-ncRNA_intronic
CAediting_1507244chrX_49035702_-ncRNA_intronic
CAediting_1507245chrX_49035905_-ncRNA_intronic
CAediting_1507246chrX_49035907_-ncRNA_intronic
CAediting_1507247chrX_49035911_-ncRNA_intronic
CAediting_1507248chrX_49035913_-ncRNA_intronic
CAediting_1507249chrX_49035925_-ncRNA_intronic
CAediting_1507250chrX_49035926_-ncRNA_intronic
CAediting_1507251chrX_49035927_-ncRNA_intronic
CAediting_1507252chrX_49035940_-ncRNA_intronic
CAediting_1507253chrX_49035948_-ncRNA_intronic
CAediting_1507254chrX_49035952_-ncRNA_intronic
CAediting_1507255chrX_49035978_-ncRNA_intronic
CAediting_1507256chrX_49035990_-ncRNA_intronic
CAediting_1507257chrX_49035998_-ncRNA_intronic
CAediting_1507258chrX_49036004_-ncRNA_intronic
CAediting_1507259chrX_49036007_-ncRNA_intronic
CAediting_1507260chrX_49036013_-ncRNA_intronic
CAediting_1507261chrX_49036022_-ncRNA_intronic
CAediting_1507262chrX_49036023_-ncRNA_intronic
CAediting_1507263chrX_49036047_-ncRNA_intronic
CAediting_1507264chrX_49036049_-ncRNA_intronic
CAediting_1507265chrX_49036058_-ncRNA_intronic
CAediting_1507266chrX_49036059_-ncRNA_intronic
CAediting_1507267chrX_49036063_-ncRNA_intronic
CAediting_1507268chrX_49036071_-ncRNA_intronic
CAediting_1507269chrX_49036076_-ncRNA_intronic
CAediting_1507270chrX_49036084_-ncRNA_intronic
CAediting_1507271chrX_49036088_-ncRNA_intronic
CAediting_1507272chrX_49036089_-ncRNA_intronic
CAediting_1507273chrX_49036102_-ncRNA_intronic
CAediting_1507274chrX_49036109_-ncRNA_intronic
CAediting_1507275chrX_49036114_-ncRNA_intronic
CAediting_1507276chrX_49036124_-ncRNA_intronic
CAediting_1507277chrX_49036133_-ncRNA_intronic
CAediting_1507278chrX_49036149_-ncRNA_intronic
CAediting_1507279chrX_49036165_-ncRNA_intronic
CAediting_1507280chrX_49036169_-ncRNA_intronic
CAediting_1507281chrX_49036211_-ncRNA_intronic
CAediting_1507282chrX_49036242_-ncRNA_intronic
CAediting_1507283chrX_49036285_-ncRNA_intronic
CAediting_1507284chrX_49036305_-ncRNA_intronic
CAediting_1507285chrX_49036318_-ncRNA_intronic
CAediting_1507286chrX_49036319_-ncRNA_intronic
CAediting_1507287chrX_49036332_-ncRNA_intronic
CAediting_1507288chrX_49036343_-ncRNA_intronic
CAediting_1507289chrX_49036345_-ncRNA_intronic
CAediting_1507290chrX_49036350_-ncRNA_intronic
CAediting_1507291chrX_49036355_-ncRNA_intronic
CAediting_1507292chrX_49036358_-ncRNA_intronic
CAediting_1507293chrX_49036359_-ncRNA_intronic
CAediting_1507294chrX_49036381_-ncRNA_intronic
CAediting_1507295chrX_49036385_-ncRNA_intronic
CAediting_1507296chrX_49036427_-ncRNA_intronic
CAediting_1507297chrX_49036432_-ncRNA_intronic
CAediting_1507298chrX_49036542_-ncRNA_intronic
CAediting_1507299chrX_49036548_-ncRNA_intronic
CAediting_1507300chrX_49036560_-ncRNA_intronic
CAediting_1507301chrX_49036591_-ncRNA_intronic
CAediting_1507302chrX_49036600_-ncRNA_intronic
CAediting_1507303chrX_49036610_-ncRNA_intronic
CAediting_1507304chrX_49036636_-ncRNA_intronic
CAediting_1507305chrX_49036639_-ncRNA_intronic
CAediting_1507306chrX_49036653_-ncRNA_intronic
CAediting_1507307chrX_49036654_-ncRNA_intronic
CAediting_1507308chrX_49036678_-ncRNA_intronic
CAediting_1507309chrX_49036680_-ncRNA_intronic
CAediting_1507310chrX_49036683_-ncRNA_intronic
CAediting_1507311chrX_49036689_-ncRNA_intronic
CAediting_1507312chrX_49036690_-ncRNA_intronic
CAediting_1507313chrX_49036702_-ncRNA_intronic
CAediting_1507314chrX_49036715_-ncRNA_intronic
CAediting_1507315chrX_49036719_-ncRNA_intronic
CAediting_1507316chrX_49036720_-ncRNA_intronic
CAediting_1507317chrX_49036725_-ncRNA_intronic
CAediting_1507318chrX_49036726_-ncRNA_intronic
CAediting_1507319chrX_49036729_-ncRNA_intronic
CAediting_1507320chrX_49036740_-ncRNA_intronic
CAediting_1507321chrX_49036745_-ncRNA_intronic
CAediting_1507322chrX_49036755_-ncRNA_intronic
CAediting_1507323chrX_49036764_-ncRNA_intronic
CAediting_1507324chrX_49036769_-ncRNA_intronic
CAediting_1507325chrX_49037291_-ncRNA_intronic
CAediting_1507326chrX_49037550_-ncRNA_intronic

check button Repat-regional RNA editing(s).
CAeditome IDPositionRepeat familyRepeat sub familyRepeat name
CAediting_1507180chrX_49030999_-SINEAluAluSp
CAediting_1507181chrX_49033171_-SINEAluAlu
CAediting_1507185chrX_49035036_-SINEAluAluSz
CAediting_1507186chrX_49035054_-SINEAluAluSz
CAediting_1507187chrX_49035066_-SINEAluAluSz
CAediting_1507188chrX_49035067_-SINEAluAluSz
CAediting_1507189chrX_49035068_-SINEAluAluSz
CAediting_1507190chrX_49035119_-SINEAluAluSz
CAediting_1507191chrX_49035131_-SINEAluAluSz
CAediting_1507192chrX_49035145_-SINEAluAluSz
CAediting_1507193chrX_49035148_-SINEAluAluSz
CAediting_1507194chrX_49035184_-SINEAluAluSz
CAediting_1507195chrX_49035192_-SINEAluAluSz
CAediting_1507196chrX_49035197_-SINEAluAluSz
CAediting_1507197chrX_49035198_-SINEAluAluSz
CAediting_1507198chrX_49035200_-SINEAluAluSz
CAediting_1507199chrX_49035203_-SINEAluAluSz
CAediting_1507200chrX_49035210_-SINEAluAluSz
CAediting_1507201chrX_49035213_-SINEAluAluSz
CAediting_1507202chrX_49035214_-SINEAluAluSz
CAediting_1507203chrX_49035222_-SINEAluAluSz
CAediting_1507204chrX_49035239_-SINEAluAluSz
CAediting_1507205chrX_49035240_-SINEAluAluSz
CAediting_1507206chrX_49035253_-SINEAluAluSz
CAediting_1507207chrX_49035265_-SINEAluAluSz
CAediting_1507208chrX_49035289_-SINEAluAluSz
CAediting_1507209chrX_49035439_-SINEAluAluY
CAediting_1507210chrX_49035464_-SINEAluAluY
CAediting_1507211chrX_49035479_-SINEAluAluY
CAediting_1507212chrX_49035503_-SINEAluAluY
CAediting_1507213chrX_49035504_-SINEAluAluY
CAediting_1507214chrX_49035512_-SINEAluAluY
CAediting_1507215chrX_49035518_-SINEAluAluY
CAediting_1507216chrX_49035522_-SINEAluAluY
CAediting_1507217chrX_49035535_-SINEAluAluY
CAediting_1507218chrX_49035539_-SINEAluAluY
CAediting_1507219chrX_49035545_-SINEAluAluY
CAediting_1507220chrX_49035571_-SINEAluAluY
CAediting_1507221chrX_49035574_-SINEAluAluY
CAediting_1507222chrX_49035575_-SINEAluAluY
CAediting_1507223chrX_49035582_-SINEAluAluY
CAediting_1507224chrX_49035584_-SINEAluAluY
CAediting_1507225chrX_49035585_-SINEAluAluY
CAediting_1507226chrX_49035586_-SINEAluAluY
CAediting_1507227chrX_49035588_-SINEAluAluY
CAediting_1507228chrX_49035591_-SINEAluAluY
CAediting_1507229chrX_49035602_-SINEAluAluY
CAediting_1507230chrX_49035603_-SINEAluAluY
CAediting_1507231chrX_49035604_-SINEAluAluY
CAediting_1507232chrX_49035610_-SINEAluAluY
CAediting_1507233chrX_49035612_-SINEAluAluY
CAediting_1507234chrX_49035613_-SINEAluAluY
CAediting_1507235chrX_49035636_-SINEAluAluY
CAediting_1507236chrX_49035649_-SINEAluAluY
CAediting_1507237chrX_49035671_-SINEAluAluY
CAediting_1507238chrX_49035674_-SINEAluAluY
CAediting_1507239chrX_49035679_-SINEAluAluY
CAediting_1507240chrX_49035680_-SINEAluAluY
CAediting_1507241chrX_49035686_-SINEAluAluY
CAediting_1507242chrX_49035688_-SINEAluAluY
CAediting_1507243chrX_49035698_-SINEAluAluY
CAediting_1507244chrX_49035702_-SINEAluAluY
CAediting_1507245chrX_49035905_-SINEAluAluJb
CAediting_1507246chrX_49035907_-SINEAluAluJb
CAediting_1507247chrX_49035911_-SINEAluAluJb
CAediting_1507248chrX_49035913_-SINEAluAluJb
CAediting_1507249chrX_49035925_-SINEAluAluJb
CAediting_1507250chrX_49035926_-SINEAluAluJb
CAediting_1507251chrX_49035927_-SINEAluAluJb
CAediting_1507252chrX_49035940_-SINEAluAluJb
CAediting_1507253chrX_49035948_-SINEAluAluJb
CAediting_1507254chrX_49035952_-SINEAluAluJb
CAediting_1507255chrX_49035978_-SINEAluAluJb
CAediting_1507256chrX_49035990_-SINEAluAluJb
CAediting_1507257chrX_49035998_-SINEAluAluJb
CAediting_1507258chrX_49036004_-SINEAluAluJb
CAediting_1507259chrX_49036007_-SINEAluAluJb
CAediting_1507260chrX_49036013_-SINEAluAluJb
CAediting_1507261chrX_49036022_-SINEAluAluJb
CAediting_1507262chrX_49036023_-SINEAluAluJb
CAediting_1507263chrX_49036047_-SINEAluAluJb
CAediting_1507264chrX_49036049_-SINEAluAluJb
CAediting_1507265chrX_49036058_-SINEAluAluJb
CAediting_1507266chrX_49036059_-SINEAluAluJb
CAediting_1507267chrX_49036063_-SINEAluAluJb
CAediting_1507268chrX_49036071_-SINEAluAluJb
CAediting_1507269chrX_49036076_-SINEAluAluJb
CAediting_1507270chrX_49036084_-SINEAluAluJb
CAediting_1507271chrX_49036088_-SINEAluAluJb
CAediting_1507272chrX_49036089_-SINEAluAluJb
CAediting_1507273chrX_49036102_-SINEAluAluJb
CAediting_1507274chrX_49036109_-SINEAluAluJb
CAediting_1507275chrX_49036114_-SINEAluAluJb
CAediting_1507276chrX_49036124_-SINEAluAluJb
CAediting_1507277chrX_49036133_-SINEAluAluJb
CAediting_1507278chrX_49036149_-SINEAluAluJb
CAediting_1507279chrX_49036165_-SINEAluAluJb
CAediting_1507280chrX_49036169_-SINEAluAluJb
CAediting_1507281chrX_49036211_-SINEAluAluSq2
CAediting_1507282chrX_49036242_-SINEAluAluSq2
CAediting_1507283chrX_49036285_-SINEAluAluSq2
CAediting_1507284chrX_49036305_-SINEAluAluSq2
CAediting_1507285chrX_49036318_-SINEAluAluSq2
CAediting_1507286chrX_49036319_-SINEAluAluSq2
CAediting_1507287chrX_49036332_-SINEAluAluSq2
CAediting_1507288chrX_49036343_-SINEAluAluSq2
CAediting_1507289chrX_49036345_-SINEAluAluSq2
CAediting_1507290chrX_49036350_-SINEAluAluSq2
CAediting_1507291chrX_49036355_-SINEAluAluSq2
CAediting_1507292chrX_49036358_-SINEAluAluSq2
CAediting_1507293chrX_49036359_-SINEAluAluSq2
CAediting_1507294chrX_49036381_-SINEAluAluSq2
CAediting_1507295chrX_49036385_-SINEAluAluSq2
CAediting_1507296chrX_49036427_-SINEAluAluSq2
CAediting_1507297chrX_49036432_-SINEAluAluSq2
CAediting_1507298chrX_49036542_-SINEAluAluSc8
CAediting_1507299chrX_49036548_-SINEAluAluSc8
CAediting_1507300chrX_49036560_-SINEAluAluSc8
CAediting_1507301chrX_49036591_-SINEAluAluSc8
CAediting_1507302chrX_49036600_-SINEAluAluSc8
CAediting_1507303chrX_49036610_-SINEAluAluSc8
CAediting_1507304chrX_49036636_-SINEAluAluSc8
CAediting_1507305chrX_49036639_-SINEAluAluSc8
CAediting_1507306chrX_49036653_-SINEAluAluSc8
CAediting_1507307chrX_49036654_-SINEAluAluSc8
CAediting_1507308chrX_49036678_-SINEAluAluSc8
CAediting_1507309chrX_49036680_-SINEAluAluSc8
CAediting_1507310chrX_49036683_-SINEAluAluSc8
CAediting_1507311chrX_49036689_-SINEAluAluSc8
CAediting_1507312chrX_49036690_-SINEAluAluSc8
CAediting_1507313chrX_49036702_-SINEAluAluSc8
CAediting_1507314chrX_49036715_-SINEAluAluSc8
CAediting_1507315chrX_49036719_-SINEAluAluSc8
CAediting_1507316chrX_49036720_-SINEAluAluSc8
CAediting_1507317chrX_49036725_-SINEAluAluSc8
CAediting_1507318chrX_49036726_-SINEAluAluSc8
CAediting_1507319chrX_49036729_-SINEAluAluSc8
CAediting_1507320chrX_49036740_-SINEAluAluSc8
CAediting_1507321chrX_49036745_-SINEAluAluSc8
CAediting_1507322chrX_49036755_-SINEAluAluSc8
CAediting_1507323chrX_49036764_-SINEAluAluSc8
CAediting_1507324chrX_49036769_-SINEAluAluSc8
CAediting_1507325chrX_49037291_-SINEAluAluSz
CAediting_1507326chrX_49037550_-SINEAluAluSg

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RNA A-to-I editing events in the alternative splicing sites for TFE3

check button RNA A-to-I editing(s) in the alternative splicing sites.
AStypeCAeditomIDEditing positionAS positionAS directionExonic locationWildtype sequenceWildtype splicing strengthRNA edited sequenceRNA edited splicing strength
ESCAediting_1507192chrX_49035145_-49035144:490351663SS2+0iTTGTTGTTTTGTATTTTTAGTAG6.27TTGTTGTTTTGTATTTTTAGTGG7.59
MEX_1CAediting_1507192chrX_49035145_-49035144:490351663SS2+0iTTGTTGTTTTGTATTTTTAGTAG6.27TTGTTGTTTTGTATTTTTAGTGG7.59
ESCAediting_1507193chrX_49035148_-49035144:490351663SS0+2iTTGTTGTTTTGTATTTTTAGTAG6.27TTGTTGTTTTGTATTTTTGGTAG-1.69
MEX_1CAediting_1507193chrX_49035148_-49035144:490351663SS0+2iTTGTTGTTTTGTATTTTTAGTAG6.27TTGTTGTTTTGTATTTTTGGTAG-1.69
ESCAediting_1507308chrX_49036678_-49036670:490366785SS3+0iAGGCGCGTG-24.6GGGCGCGTG-27.51
MEX_2CAediting_1507308chrX_49036678_-49036670:490366785SS3+0iAGGCGCGTG-24.6GGGCGCGTG-27.51

check button Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000068323.15.TFE3.
boxplot

check button Correlation between RNA A-to-I editing and PSI for ENSG00000068323.15.TFE3.
boxplot

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TFE3

check button Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.
boxplot

check button Correlation between RNA A-to-I editing and gene expression.
boxplot

check button - Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TFE3

check button- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.


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The effects of the RNA editing to the miRNA binding sites for TFE3

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

check button RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA gained miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in lncRNA lost miRNA binding sites.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs lost binding to lncRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy

check button RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_688081chr9_63819627_+ENSG00000068323.15ENST00000493583hsa-miR-4477b49033477490334837mer-m84903347649033493143-13.37
CAediting_980496chr14_31014685_-ENSG00000068323.15ENST00000493583hsa-miR-624-3p49029808490298147mer-m84902980749029827146-16.38
CAediting_86358chr1_109598906_+ENSG00000068323.15ENST00000493583hsa-miR-197-5p49039137490391437mer-m84903913649039158156-24.42
CAediting_77128chr1_85133844_+ENSG00000068323.15ENST00000493583hsa-miR-4423-3p49039121490391277mer-m84903912049039138146-18.87
CAediting_1368054chr19_46709310_-ENSG00000068323.15ENST00000493583hsa-miR-320e49038206490382138mer-1a4903820649038224144-19.99
CAediting_77128chr1_85133844_+ENSG00000068323.15ENST00000493583hsa-miR-4423-3p49038300490383067mer-m84903829949038319140-15.42
CAediting_604450chr7_133034877_-ENSG00000068323.15ENST00000493583hsa-miR-365449038209490382157mer-m84903820849038229147-20.06
CAediting_1054808chr15_66496985_-ENSG00000068323.15ENST00000493583hsa-miR-451249029539490295468mer-1a4902953949029560146-20.2
CAediting_1054808chr15_66496985_-ENSG00000068323.15ENST00000493583hsa-miR-451249029244490292507mer-m84902924349029266150-23.09
CAediting_1054808chr15_66496985_-ENSG00000068323.15ENST00000493583hsa-miR-451249028810490288178mer-1a4902881049028831146-19.82
CAediting_1054808chr15_66496985_-ENSG00000068323.15ENST00000493583hsa-miR-451249030092490300987mer-m84903009149030114155-29.51
CAediting_1160181chr17_7017644_-ENSG00000068323.15ENST00000493583hsa-miR-195-3p49030486490304927mer-1a4903048649030509150-17.95
CAediting_396018chr5_1062918_-ENSG00000068323.15ENST00000493583hsa-miR-463549030506490305127mer-m84903050549030528165-24.45
CAediting_442554chr5_154685830_+ENSG00000068323.15ENST00000493583hsa-miR-130349030204490302107mer-m84903020349030224151-21.19
CAediting_524911chr7_5495852_-ENSG00000068323.15ENST00000493583hsa-miR-589-3p49029628490296347mer-m84902962749029650148-18.37

check button RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.
CAeditom_IDPositionENSGENSTmiRNATargetscan startTargetscan endTargetscan scoreMiranda startMiranda endMiranda scoreMiranda energy
CAediting_1054808chr15_66496985_-ENSG00000068323.15ENST00000493583hsa-miR-451249038330490383367mer-m84903832949038350140-14.34
CAediting_1524209chrX_134546392_-ENSG00000068323.15ENST00000493583hsa-miR-503-5p49038225490382317mer-m84903822449038250144-16.21
CAediting_393chr1_1167164_+ENSG00000068323.15ENST00000493583hsa-miR-200b-3p49029138490291447mer-m84902913749029156153-13.11
CAediting_748296chr10_51299626_+ENSG00000068323.15ENST00000493583hsa-miR-605-3p49029219490292257mer-m84902921849029239140-14.06
CAediting_1351755chr19_40282625_-ENSG00000068323.15ENST00000493583hsa-miR-64149029737490297426mer4902973649029759153-20.33
CAediting_580943chr7_100356700_+ENSG00000068323.15ENST00000493583hsa-miR-6840-3p49029089490290968mer-1a4902908949029110140-15.37
CAediting_580943chr7_100356700_+ENSG00000068323.15ENST00000493583hsa-miR-6840-3p49029774490297818mer-1a4902977449029795149-24.67

check button Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TFE3

check button - RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.
ENSTENST typeRNA structure without RNA A-to-I editing.RNA structure with RNA A-to-I editing.

check button RNA A-to-I editing in RNA structures for Minimum free energy (MFE).
CAeditom_IDENSTEditing_PositionMFE_withoneAIMFE_withoutAIMFE_withmultipleAI

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Relation with ADAR for TFE3

check button Correlation between ADAR gene expression and RNA editing frequency
CancerCAeditomIDpositionADAR1 (p-val)ADAR1 (coeff.)ADAR2 (p-val)ADAR2 (coeff.)ADAR3 (p-val)ADAR3 (coeff.)

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Relation with cancer stages for TFE3

check button Correlation between Cancer stages and RNA editing frequency
CancerStage_typeCAeditomIDpositionP-valCoeff.
ESCAclinical_stageCAediting_1507274chrX_49036109_-0.02412791010633250.514740559342704

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Relation with survival for TFE3

check button Correlation between RNA editing and survival
CancerCAeditomIDpositionKMpvalueCoxpvalueCoxHR
STADCAediting_1507311chrX_49036689_-0.02048932710931850.03463345489.56

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RelatedDrugs for TFE3

check button Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)
GeneUniProtAccDrugBank IDDrug nameDrug activityDrug typeDrug status

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RelatedDiseases for TFE3

check button Diseases associated with this gene.
(DisGeNet 7.0)
GeneDisease IDDisease name# pubmedsSource
TFE3C4518356MiT family translocation renal cell carcinoma2ORPHANET
TFE3C0206657Alveolar Soft Part Sarcoma1ORPHANET
TFE3C0206732Epithelioid hemangioendothelioma1ORPHANET