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Editing gene: TEAD1 (CAeditome ID:7003)

Gene summary for TEAD1

Gene summary

Gene information	Gene symbol	TEAD1
	Gene ID	7003
	Gene name	TEA domain transcription factor 1
	Synonyms	AA\|NTEF-1\|REF1\|TCF-13\|TCF13\|TEAD-1\|TEF-1
	Cytomap	11p15.3
	Type of gene	protein-coding
	Description	transcriptional enhancer factor TEF-1TEA domain family member 1 (SV40 transcriptional enhancer factor)protein GT-IICtranscription factor 13transcriptional enhancer factor 1
	Modification date	20210518
	UniProtAcc	P28347
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TEAD1	GO:0003700	Transcriptional enhancer factor TEF-1	18579750
TEAD1	GO:0003700	Transcriptional enhancer factor TEF-1	19324877
TEAD1	GO:1990837	Transcriptional enhancer factor TEF-1	28473536
TEAD1	GO:0035329	Transcriptional enhancer factor TEF-1	18579750
TEAD1	GO:0035329	Transcriptional enhancer factor TEF-1	19324877
TEAD1	GO:0005654	Transcriptional enhancer factor TEF-1	0000052
TEAD1	GO:0140552	Transcriptional enhancer factor TEF-1	20123905

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RNA A-to-I events for TEAD1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000187079.13

RNA A-to-I editing events in Cancer.

CAediting_798877(12675490, +), CAediting_798878(12675492, +), CAediting_798879(12675493, +), CAediting_798880(12675511, +), CAediting_798881(12675526, +), CAediting_798882(12690074, +), CAediting_798883(12690090, +), CAediting_798884(12690094, +), CAediting_798885(12690138, +), CAediting_798886(12690143, +), CAediting_798887(12690144, +), CAediting_798888(12690167, +), CAediting_798889(12690778, +), CAediting_798890(12690802, +), CAediting_798891(12690929, +), CAediting_798892(12709091, +), CAediting_798893(12709224, +), CAediting_798894(12709259, +), CAediting_798895(12709644, +), CAediting_798896(12709656, +), CAediting_798897(12709767, +), CAediting_798898(12710141, +), CAediting_798899(12710149, +), CAediting_798900(12721188, +), CAediting_798901(12721194, +), CAediting_798902(12721203, +), CAediting_798903(12721206, +), CAediting_798904(12721233, +), CAediting_798905(12721292, +), CAediting_798906(12722305, +), CAediting_798907(12722317, +), CAediting_798908(12722323, +), CAediting_798909(12722381, +), CAediting_798910(12751073, +), CAediting_798911(12751168, +), CAediting_798912(12781874, +), CAediting_798913(12781912, +), CAediting_798914(12781915, +), CAediting_798915(12781971, +), CAediting_798916(12781975, +), CAediting_798917(12782016, +), CAediting_798918(12782043, +), CAediting_798919(12782052, +), CAediting_798920(12782065, +), CAediting_798921(12782070, +), CAediting_798922(12792847, +), CAediting_798923(12836299, +), CAediting_798924(12839323, +), CAediting_798925(12848744, +), CAediting_798926(12848746, +), CAediting_798927(12849128, +), CAediting_798928(12851697, +), CAediting_798929(12851764, +), CAediting_798930(12852565, +), CAediting_798931(12854816, +), CAediting_798932(12870005, +), CAediting_798933(12870630, +), CAediting_798934(12870631, +), CAediting_798935(12870792, +), CAediting_798936(12870807, +), CAediting_798937(12877419, +), CAediting_798938(12877538, +), CAediting_798939(12877539, +), CAediting_798940(12877565, +), CAediting_798941(12877574, +), CAediting_798942(12877580, +), CAediting_798943(12877604, +), CAediting_798944(12877609, +), CAediting_798945(12877838, +), CAediting_798946(12877899, +), CAediting_798947(12877901, +), CAediting_798948(12877910, +), CAediting_798949(12877915, +), CAediting_798950(12877937, +), CAediting_798951(12877996, +), CAediting_798952(12878042, +), CAediting_798953(12878054, +), CAediting_798954(12878059, +), CAediting_798955(12892524, +), CAediting_798956(12913669, +), CAediting_798957(12938215, +), CAediting_798958(12938292, +), CAediting_798959(12938298, +), CAediting_798960(12941258, +),

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RNA editing positional annotations for TEAD1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_798877	chr11_12675490_+	UTR5
CAediting_798878	chr11_12675492_+	UTR5
CAediting_798879	chr11_12675493_+	UTR5
CAediting_798880	chr11_12675511_+	UTR5
CAediting_798881	chr11_12675526_+	UTR5
CAediting_798882	chr11_12690074_+	intronic
CAediting_798883	chr11_12690090_+	intronic
CAediting_798884	chr11_12690094_+	intronic
CAediting_798885	chr11_12690138_+	intronic
CAediting_798886	chr11_12690143_+	intronic
CAediting_798887	chr11_12690144_+	intronic
CAediting_798888	chr11_12690167_+	intronic
CAediting_798889	chr11_12690778_+	intronic
CAediting_798890	chr11_12690802_+	intronic
CAediting_798891	chr11_12690929_+	intronic
CAediting_798892	chr11_12709091_+	intronic
CAediting_798893	chr11_12709224_+	intronic
CAediting_798894	chr11_12709259_+	intronic
CAediting_798895	chr11_12709644_+	intronic
CAediting_798896	chr11_12709656_+	intronic
CAediting_798897	chr11_12709767_+	intronic
CAediting_798898	chr11_12710141_+	intronic
CAediting_798899	chr11_12710149_+	intronic
CAediting_798900	chr11_12721188_+	intronic
CAediting_798901	chr11_12721194_+	intronic
CAediting_798902	chr11_12721203_+	intronic
CAediting_798903	chr11_12721206_+	intronic
CAediting_798904	chr11_12721233_+	intronic
CAediting_798905	chr11_12721292_+	intronic
CAediting_798906	chr11_12722305_+	intronic
CAediting_798907	chr11_12722317_+	intronic
CAediting_798908	chr11_12722323_+	intronic
CAediting_798909	chr11_12722381_+	intronic
CAediting_798910	chr11_12751073_+	intronic
CAediting_798911	chr11_12751168_+	intronic
CAediting_798912	chr11_12781874_+	intronic
CAediting_798913	chr11_12781912_+	intronic
CAediting_798914	chr11_12781915_+	intronic
CAediting_798915	chr11_12781971_+	intronic
CAediting_798916	chr11_12781975_+	intronic
CAediting_798917	chr11_12782016_+	intronic
CAediting_798918	chr11_12782043_+	intronic
CAediting_798919	chr11_12782052_+	intronic
CAediting_798920	chr11_12782065_+	intronic
CAediting_798921	chr11_12782070_+	intronic
CAediting_798922	chr11_12792847_+	intronic
CAediting_798923	chr11_12836299_+	ncRNA_intronic
CAediting_798924	chr11_12839323_+	ncRNA_intronic
CAediting_798925	chr11_12848744_+	ncRNA_intronic
CAediting_798926	chr11_12848746_+	ncRNA_intronic
CAediting_798927	chr11_12849128_+	ncRNA_exonic
CAediting_798928	chr11_12851697_+	ncRNA_intronic
CAediting_798929	chr11_12851764_+	ncRNA_intronic
CAediting_798930	chr11_12852565_+	ncRNA_intronic
CAediting_798931	chr11_12854816_+	ncRNA_intronic
CAediting_798932	chr11_12870005_+	intronic
CAediting_798933	chr11_12870630_+	intronic
CAediting_798934	chr11_12870631_+	intronic
CAediting_798935	chr11_12870792_+	intronic
CAediting_798936	chr11_12870807_+	intronic
CAediting_798937	chr11_12877419_+	intronic
CAediting_798938	chr11_12877538_+	intronic
CAediting_798939	chr11_12877539_+	intronic
CAediting_798940	chr11_12877565_+	intronic
CAediting_798941	chr11_12877574_+	intronic
CAediting_798942	chr11_12877580_+	intronic
CAediting_798943	chr11_12877604_+	intronic
CAediting_798944	chr11_12877609_+	intronic
CAediting_798945	chr11_12877838_+	intronic
CAediting_798946	chr11_12877899_+	intronic
CAediting_798947	chr11_12877901_+	intronic
CAediting_798948	chr11_12877910_+	intronic
CAediting_798949	chr11_12877915_+	intronic
CAediting_798950	chr11_12877937_+	intronic
CAediting_798951	chr11_12877996_+	intronic
CAediting_798952	chr11_12878042_+	intronic
CAediting_798953	chr11_12878054_+	intronic
CAediting_798954	chr11_12878059_+	intronic
CAediting_798955	chr11_12892524_+	intronic
CAediting_798956	chr11_12913669_+	intronic
CAediting_798957	chr11_12938215_+	UTR3
CAediting_798958	chr11_12938292_+	UTR3
CAediting_798959	chr11_12938298_+	UTR3
CAediting_798960	chr11_12941258_+	UTR3

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_798882	chr11_12690074_+	SINE	Alu	AluY
CAediting_798883	chr11_12690090_+	SINE	Alu	AluY
CAediting_798884	chr11_12690094_+	SINE	Alu	AluY
CAediting_798885	chr11_12690138_+	SINE	Alu	AluY
CAediting_798886	chr11_12690143_+	SINE	Alu	AluY
CAediting_798887	chr11_12690144_+	SINE	Alu	AluY
CAediting_798888	chr11_12690167_+	SINE	Alu	AluY
CAediting_798889	chr11_12690778_+	SINE	Alu	AluJb
CAediting_798890	chr11_12690802_+	SINE	Alu	AluJb
CAediting_798891	chr11_12690929_+	SINE	Alu	AluJb
CAediting_798892	chr11_12709091_+	SINE	Alu	AluSz
CAediting_798893	chr11_12709224_+	SINE	Alu	AluSz
CAediting_798894	chr11_12709259_+	SINE	Alu	AluSz
CAediting_798895	chr11_12709644_+	SINE	Alu	AluJr4
CAediting_798896	chr11_12709656_+	SINE	Alu	AluJr4
CAediting_798897	chr11_12709767_+	SINE	Alu	AluJr4
CAediting_798898	chr11_12710141_+	SINE	Alu	AluJb
CAediting_798899	chr11_12710149_+	SINE	Alu	AluJb
CAediting_798910	chr11_12751073_+	SINE	Alu	AluJr
CAediting_798911	chr11_12751168_+	SINE	Alu	AluJr
CAediting_798912	chr11_12781874_+	SINE	Alu	AluJb
CAediting_798913	chr11_12781912_+	SINE	Alu	AluJb
CAediting_798914	chr11_12781915_+	SINE	Alu	AluJb
CAediting_798915	chr11_12781971_+	SINE	Alu	AluJb
CAediting_798916	chr11_12781975_+	SINE	Alu	AluJb
CAediting_798917	chr11_12782016_+	SINE	Alu	AluJb
CAediting_798918	chr11_12782043_+	SINE	Alu	AluJb
CAediting_798919	chr11_12782052_+	SINE	Alu	AluJb
CAediting_798920	chr11_12782065_+	SINE	Alu	AluJb
CAediting_798921	chr11_12782070_+	SINE	Alu	AluJb
CAediting_798922	chr11_12792847_+	SINE	Alu	AluJr
CAediting_798923	chr11_12836299_+	SINE	Alu	AluY
CAediting_798924	chr11_12839323_+	SINE	Alu	AluSx
CAediting_798925	chr11_12848744_+	SINE	Alu	AluJr
CAediting_798926	chr11_12848746_+	SINE	Alu	AluJr
CAediting_798927	chr11_12849128_+	SINE	Alu	AluSz
CAediting_798928	chr11_12851697_+	SINE	Alu	AluSx1
CAediting_798929	chr11_12851764_+	SINE	Alu	AluSx1
CAediting_798930	chr11_12852565_+	SINE	Alu	AluSz
CAediting_798931	chr11_12854816_+	SINE	Alu	AluJo
CAediting_798932	chr11_12870005_+	SINE	Alu	AluSz
CAediting_798933	chr11_12870630_+	SINE	Alu	AluSx3
CAediting_798934	chr11_12870631_+	SINE	Alu	AluSx3
CAediting_798935	chr11_12870792_+	SINE	Alu	AluSx3
CAediting_798936	chr11_12870807_+	SINE	Alu	AluSx3
CAediting_798937	chr11_12877419_+	SINE	Alu	AluSq
CAediting_798938	chr11_12877538_+	SINE	Alu	AluSq
CAediting_798939	chr11_12877539_+	SINE	Alu	AluSq
CAediting_798940	chr11_12877565_+	SINE	Alu	AluSq
CAediting_798941	chr11_12877574_+	SINE	Alu	AluSq
CAediting_798942	chr11_12877580_+	SINE	Alu	AluSq
CAediting_798943	chr11_12877604_+	SINE	Alu	AluSq
CAediting_798944	chr11_12877609_+	SINE	Alu	AluSq
CAediting_798945	chr11_12877838_+	SINE	Alu	AluJb
CAediting_798946	chr11_12877899_+	SINE	Alu	AluJb
CAediting_798947	chr11_12877901_+	SINE	Alu	AluJb
CAediting_798948	chr11_12877910_+	SINE	Alu	AluJb
CAediting_798949	chr11_12877915_+	SINE	Alu	AluJb
CAediting_798950	chr11_12877937_+	SINE	Alu	AluJb
CAediting_798951	chr11_12877996_+	SINE	Alu	AluJb
CAediting_798952	chr11_12878042_+	SINE	Alu	AluJb
CAediting_798953	chr11_12878054_+	SINE	Alu	AluJb
CAediting_798954	chr11_12878059_+	SINE	Alu	AluJb
CAediting_798955	chr11_12892524_+	SINE	Alu	AluSx1
CAediting_798956	chr11_12913669_+	DNA	hAT-Blackjack	MER53

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RNA A-to-I editing events in the alternative splicing sites for TEAD1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000187079.13.TEAD1.

Correlation between RNA A-to-I editing and PSI for ENSG00000187079.13.TEAD1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TEAD1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TEAD1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TEAD1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_798960	chr11_12941258_+	ENSG00000187079.13	ENST00000526600	hsa-miR-6514-3p	12941254	12941260	7mer-m8	12941242	12941261	144.00	-19.46
CAediting_798960	chr11_12941258_+	ENSG00000187079.13	ENST00000526600	hsa-miR-6747-3p	12941256	12941262	7mer-m8	12941247	12941267	145.00	-20.00
CAediting_798960	chr11_12941258_+	ENSG00000187079.13	ENST00000526600	hsa-miR-6811-3p	12941253	12941260	8mer-1a	12941240	12941260	154.00	-20.36
CAediting_798960	chr11_12941258_+	ENSG00000187079.13	ENST00000526600	hsa-miR-7114-5p	12941251	12941257	7mer-m8	12941239	12941258	141.00	-18.98
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000334310	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000334310	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000334310	hsa-miR-129-1-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000334310	hsa-miR-129-2-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000527575	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000527575	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000527575	hsa-miR-129-1-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000527575	hsa-miR-129-2-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000526600	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000526600	hsa-miR-1233-3p	12938290	12938297	8mer-1a	12938278	12938297	149.00	-16.39
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000526600	hsa-miR-129-1-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56
CAediting_798958	chr11_12938292_+	ENSG00000187079.13	ENST00000526600	hsa-miR-129-2-3p	12938289	12938295	7mer-m8	12938274	12938296	141.00	-11.56

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_798957	chr11_12938215_+	ENSG00000187079.13	ENST00000334310	hsa-miR-12123	12938208	12938214	7mer-m8	12938195	12938215	148	-6.47
CAediting_798959	chr11_12938298_+	ENSG00000187079.13	ENST00000334310	hsa-miR-4502	12938295	12938301	7mer-m8	12938281	12938302	146	-13.93
CAediting_798957	chr11_12938215_+	ENSG00000187079.13	ENST00000527575	hsa-miR-12123	12938208	12938214	7mer-m8	12938195	12938215	148	-6.47
CAediting_798959	chr11_12938298_+	ENSG00000187079.13	ENST00000527575	hsa-miR-4502	12938295	12938301	7mer-m8	12938281	12938302	146	-13.93
CAediting_798957	chr11_12938215_+	ENSG00000187079.13	ENST00000526600	hsa-miR-12123	12938208	12938214	7mer-m8	12938195	12938215	148	-6.47
CAediting_798959	chr11_12938298_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4502	12938295	12938301	7mer-m8	12938281	12938302	146	-13.93

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000334310	hsa-miR-4477b	12937884	12937890	7mer-m8	12937870	12937891	144	-11.18
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000334310	hsa-miR-4477b	12939033	12939039	7mer-m8	12939014	12939040	150	-21.56
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000527575	hsa-miR-4477b	12937884	12937890	7mer-m8	12937870	12937891	144	-11.18
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000527575	hsa-miR-4477b	12939033	12939039	7mer-m8	12939014	12939040	150	-21.56
CAediting_980496	chr14_31014685_-	ENSG00000187079.13	ENST00000526600	hsa-miR-624-3p	12940484	12940490	7mer-m8	12940471	12940491	145	-18.29
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12937884	12937890	7mer-m8	12937870	12937891	144	-11.18
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12939033	12939039	7mer-m8	12939014	12939040	150	-21.56
CAediting_228905	chr2_188297554_+	ENSG00000187079.13	ENST00000334310	hsa-miR-561-3p	12937917	12937923	7mer-m8	12937901	12937924	152	-9.66
CAediting_396018	chr5_1062918_-	ENSG00000187079.13	ENST00000334310	hsa-miR-4635	12937885	12937891	7mer-m8	12937872	12937892	150	-15.29
CAediting_228905	chr2_188297554_+	ENSG00000187079.13	ENST00000527575	hsa-miR-561-3p	12937917	12937923	7mer-m8	12937901	12937924	152	-9.66
CAediting_396018	chr5_1062918_-	ENSG00000187079.13	ENST00000527575	hsa-miR-4635	12937885	12937891	7mer-m8	12937872	12937892	150	-15.29
CAediting_1229415	chr17_67471547_+	ENSG00000187079.13	ENST00000526600	hsa-miR-548aa	12941466	12941473	8mer-1a	12941450	12941473	156	-15.39
CAediting_1229415	chr17_67471547_+	ENSG00000187079.13	ENST00000526600	hsa-miR-548aa	12942893	12942899	7mer-m8	12942875	12942900	165	-16.06
CAediting_1229415	chr17_67471547_+	ENSG00000187079.13	ENST00000526600	hsa-miR-548aa	12944394	12944401	8mer-1a	12944372	12944401	155	-13.4
CAediting_1160181	chr17_7017644_-	ENSG00000187079.13	ENST00000526600	hsa-miR-195-3p	12940528	12940533	6mer	12940515	12940534	140	-14.23
CAediting_1399425	chr20_1392958_-	ENSG00000187079.13	ENST00000526600	hsa-miR-6869-5p	12939455	12939461	7mer-m8	12939441	12939462	140	-15.32
CAediting_1399425	chr20_1392958_-	ENSG00000187079.13	ENST00000526600	hsa-miR-6869-5p	12940326	12940332	7mer-m8	12940313	12940333	156	-23.35
CAediting_228905	chr2_188297554_+	ENSG00000187079.13	ENST00000526600	hsa-miR-561-3p	12943062	12943068	7mer-m8	12943049	12943069	150	-9.56
CAediting_228905	chr2_188297554_+	ENSG00000187079.13	ENST00000526600	hsa-miR-561-3p	12937917	12937923	7mer-m8	12937901	12937924	152	-9.66
CAediting_396018	chr5_1062918_-	ENSG00000187079.13	ENST00000526600	hsa-miR-4635	12937885	12937891	7mer-m8	12937872	12937892	150	-15.29
CAediting_524911	chr7_5495852_-	ENSG00000187079.13	ENST00000526600	hsa-miR-589-3p	12941570	12941576	7mer-m8	12941554	12941577	154	-15.66

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000187079.13	ENST00000334310	hsa-miR-1285-5p	12938229	12938235	7mer-m8	12938216	12938236	147	-11.97
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000334310	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000334310	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_573001	chr7_92204086_-	ENSG00000187079.13	ENST00000527575	hsa-miR-1285-5p	12938229	12938235	7mer-m8	12938216	12938236	147	-11.97
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000527575	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000527575	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_573001	chr7_92204086_-	ENSG00000187079.13	ENST00000526600	hsa-miR-1285-5p	12938229	12938235	7mer-m8	12938216	12938236	147	-11.97
CAediting_573001	chr7_92204086_-	ENSG00000187079.13	ENST00000526600	hsa-miR-1285-5p	12939861	12939867	7mer-m8	12939848	12939868	143	-13.19
CAediting_1160181	chr17_7017644_-	ENSG00000187079.13	ENST00000526600	hsa-miR-195-3p	12937564	12937571	8mer-1a	12937550	12937571	146	-8.77
CAediting_1160181	chr17_7017644_-	ENSG00000187079.13	ENST00000526600	hsa-miR-195-3p	12941951	12941957	7mer-m8	12941937	12941958	150	-16.18
CAediting_1160181	chr17_7017644_-	ENSG00000187079.13	ENST00000526600	hsa-miR-195-3p	12944155	12944160	6mer	12944140	12944161	140	-8.33
CAediting_86358	chr1_109598906_+	ENSG00000187079.13	ENST00000526600	hsa-miR-197-5p	12939454	12939461	8mer-1a	12939439	12939461	148	-18.84
CAediting_86358	chr1_109598906_+	ENSG00000187079.13	ENST00000526600	hsa-miR-197-5p	12940325	12940332	8mer-1a	12940312	12940332	154	-24.24
CAediting_393	chr1_1167164_+	ENSG00000187079.13	ENST00000526600	hsa-miR-200b-3p	12944323	12944329	7mer-m8	12944309	12944330	152	-14.17
CAediting_604450	chr7_133034877_-	ENSG00000187079.13	ENST00000526600	hsa-miR-3654	12939809	12939815	7mer-m8	12939799	12939816	148	-17.69
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12939339	12939345	7mer-m8	12939325	12939346	148	-7.68
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12939339	12939345	7mer-m8	12939325	12939346	148	-7.68
CAediting_688080	chr9_63819626_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_688081	chr9_63819627_+	ENSG00000187079.13	ENST00000526600	hsa-miR-4477b	12937962	12937968	7mer-m8	12937947	12937969	144	-9.75
CAediting_228905	chr2_188297554_+	ENSG00000187079.13	ENST00000526600	hsa-miR-561-3p	12944284	12944290	7mer-m8	12944270	12944291	140	-4.57
CAediting_524911	chr7_5495852_-	ENSG00000187079.13	ENST00000526600	hsa-miR-589-3p	12940828	12940834	7mer-m8	12940810	12940835	148	-16.01
CAediting_748296	chr10_51299626_+	ENSG00000187079.13	ENST00000526600	hsa-miR-605-3p	12943658	12943664	7mer-m8	12943645	12943665	153	-14.42
CAediting_748296	chr10_51299626_+	ENSG00000187079.13	ENST00000526600	hsa-miR-605-3p	12944190	12944196	7mer-m8	12944176	12944197	140	-12.45
CAediting_980496	chr14_31014685_-	ENSG00000187079.13	ENST00000526600	hsa-miR-624-3p	12942907	12942914	8mer-1a	12942894	12942914	155	-13.69
CAediting_1351755	chr19_40282625_-	ENSG00000187079.13	ENST00000526600	hsa-miR-641	12944087	12944092	6mer	12944067	12944093	144	-24.17
CAediting_468389	chr6_31355314_-	ENSG00000187079.13	ENST00000526600	hsa-miR-6891-5p	12943842	12943848	7mer-m8	12943832	12943849	147	-22.32

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TEAD1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TEAD1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
LGG	CAediting_798960	chr11_12941258_+	0.000380908806488334	0.345173452481517	.	.	.	.
BRCA	CAediting_798960	chr11_12941258_+	0.000131486574288609	0.265184990457622	.	.	.	.
LIHC	CAediting_798960	chr11_12941258_+	0.00120229867754593	0.432988777660619	.	.	.	.
PCPG	CAediting_798960	chr11_12941258_+	1.05618519419352e-05	0.402993592759394	.	.	.	.

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Relation with cancer stages for TEAD1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TEAD1

Correlation between RNA editing and survival

Cancer	CAeditomID	position	KMpvalue	Coxpvalue	CoxHR
KIRC	CAediting_798960	chr11_12941258_+	0.00762186964017697	0.031178	1.13145e+11

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RelatedDrugs for TEAD1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TEAD1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TEAD1	C1862382	SVEINSSON CHORIORETINAL ATROPHY	3	CTD_human;ORPHANET;UNIPROT

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene