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Editing gene: TCF20 (CAeditome ID:6942)

Gene summary for TCF20

Gene summary

Gene information	Gene symbol	TCF20
	Gene ID	6942
	Gene name	transcription factor 20
	Synonyms	AR1\|DDVIBA\|SPBP\|TCF-20
	Cytomap	22q13.2\|22q13.3
	Type of gene	protein-coding
	Description	transcription factor 20SPRE-binding proteinnuclear factor SPBPstromelysin-1 PDGF-responsive element-binding proteinstromelysin-1 platelet-derived growth factor-responsive element binding protein
	Modification date	20210518
	UniProtAcc	Q9UGU0
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TCF20	GO:0005634	Transcription factor 20	10995766
TCF20	GO:0005654	Transcription factor 20	0000052
TCF20	GO:0016604	Transcription factor 20	0000052

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RNA A-to-I events for TCF20

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000100207.17

RNA A-to-I editing events in Cancer.

CAediting_1489559(42161887, -), CAediting_1489560(42161890, -), CAediting_1489561(42161903, -), CAediting_1489562(42161920, -), CAediting_1489563(42161936, -), CAediting_1489564(42161957, -), CAediting_1489565(42162035, -), CAediting_1489566(42162043, -), CAediting_1489567(42162077, -), CAediting_1489568(42162078, -), CAediting_1489569(42162083, -), CAediting_1489570(42162089, -), CAediting_1489571(42162118, -), CAediting_1489572(42162125, -), CAediting_1489573(42162145, -), CAediting_1489574(42162151, -), CAediting_1489575(42162154, -), CAediting_1489576(42162159, -), CAediting_1489577(42162160, -), CAediting_1489578(42162169, -), CAediting_1489579(42162177, -), CAediting_1489580(42162190, -), CAediting_1489581(42162195, -), CAediting_1489582(42162214, -), CAediting_1489583(42162244, -), CAediting_1489584(42164267, -), CAediting_1489585(42164326, -), CAediting_1489586(42164334, -), CAediting_1489587(42164353, -), CAediting_1489588(42164389, -), CAediting_1489589(42164490, -), CAediting_1489590(42164498, -), CAediting_1489591(42164505, -), CAediting_1489592(42164514, -), CAediting_1489593(42166363, -), CAediting_1489594(42166364, -), CAediting_1489595(42166365, -), CAediting_1489596(42166428, -), CAediting_1489597(42166464, -), CAediting_1489598(42166476, -), CAediting_1489599(42166562, -), CAediting_1489600(42166565, -), CAediting_1489601(42167774, -), CAediting_1489602(42167788, -), CAediting_1489603(42167825, -), CAediting_1489604(42167847, -), CAediting_1489605(42167851, -), CAediting_1489606(42167861, -), CAediting_1489607(42167871, -), CAediting_1489608(42167890, -), CAediting_1489609(42167928, -), CAediting_1489610(42167960, -), CAediting_1489611(42167973, -), CAediting_1489612(42167994, -), CAediting_1489613(42170305, -), CAediting_1489614(42175469, -), CAediting_1489615(42175479, -), CAediting_1489616(42177212, -), CAediting_1489617(42177252, -), CAediting_1489618(42177315, -), CAediting_1489619(42177339, -), CAediting_1489620(42177371, -), CAediting_1489621(42177383, -), CAediting_1489622(42177396, -), CAediting_1489623(42178694, -), CAediting_1489624(42178727, -), CAediting_1489625(42178750, -), CAediting_1489626(42178758, -), CAediting_1489627(42178759, -), CAediting_1489628(42178762, -), CAediting_1489629(42178773, -), CAediting_1489630(42178781, -), CAediting_1489631(42178783, -), CAediting_1489632(42178799, -), CAediting_1489633(42178807, -), CAediting_1489634(42190261, -), CAediting_1489635(42190262, -), CAediting_1489636(42190287, -), CAediting_1489637(42193429, -), CAediting_1489638(42194803, -), CAediting_1489639(42194854, -), CAediting_1489640(42195161, -), CAediting_1489641(42195164, -), CAediting_1489642(42196082, -), CAediting_1489643(42196088, -), CAediting_1489644(42196093, -), CAediting_1489645(42196131, -), CAediting_1489646(42199774, -), CAediting_1489647(42204302, -), CAediting_1489648(42206047, -), CAediting_1489649(42211041, -), CAediting_1489650(42215553, -), CAediting_1489651(42215581, -), CAediting_1489652(42215636, -), CAediting_1489653(42215648, -), CAediting_1489654(42215766, -), CAediting_1489655(42216125, -), CAediting_1489656(42216182, -), CAediting_1489657(42216187, -), CAediting_1489658(42216201, -), CAediting_1489659(42216205, -), CAediting_1489660(42216211, -), CAediting_1489661(42216213, -), CAediting_1489662(42216219, -), CAediting_1489663(42216220, -), CAediting_1489664(42216221, -), CAediting_1489665(42216228, -), CAediting_1489666(42219127, -), CAediting_1489667(42219265, -), CAediting_1489668(42221835, -), CAediting_1489669(42221867, -), CAediting_1489670(42221899, -), CAediting_1489671(42221903, -), CAediting_1489672(42224396, -), CAediting_1489673(42225160, -), CAediting_1489674(42225169, -), CAediting_1489675(42225199, -), CAediting_1489676(42225200, -), CAediting_1489677(42225223, -), CAediting_1489678(42225242, -), CAediting_1489679(42225251, -), CAediting_1489680(42225268, -), CAediting_1489681(42226593, -), CAediting_1489682(42226642, -), CAediting_1489683(42227167, -), CAediting_1489684(42233006, -), CAediting_1489685(42233014, -), CAediting_1489686(42233017, -), CAediting_1489687(42233049, -), CAediting_1489688(42233059, -), CAediting_1489689(42234883, -), CAediting_1489690(42241687, -), CAediting_1489691(42244845, -), CAediting_1489692(42244868, -), CAediting_1489693(42245242, -), CAediting_1489694(42245244, -), CAediting_1489695(42245252, -), CAediting_1489696(42245283, -), CAediting_1489697(42245311, -), CAediting_1489698(42245358, -), CAediting_1489699(42246166, -), CAediting_1489700(42246173, -), CAediting_1489701(42246202, -), CAediting_1489702(42246203, -), CAediting_1489703(42246216, -), CAediting_1489704(42246233, -), CAediting_1489705(42246242, -), CAediting_1489706(42246243, -), CAediting_1489707(42246269, -), CAediting_1489708(42246273, -), CAediting_1489709(42246278, -), CAediting_1489710(42246287, -), CAediting_1489711(42246298, -), CAediting_1489712(42246299, -), CAediting_1489713(42246300, -), CAediting_1489714(42246308, -), CAediting_1489715(42246309, -), CAediting_1489716(42246323, -), CAediting_1489717(42246324, -), CAediting_1489718(42246331, -), CAediting_1489719(42246332, -), CAediting_1489720(42246333, -), CAediting_1489721(42246366, -), CAediting_1489722(42251263, -), CAediting_1489723(42251272, -), CAediting_1489724(42251292, -), CAediting_1489725(42251324, -), CAediting_1489726(42251330, -), CAediting_1489727(42251375, -), CAediting_1489728(42251385, -), CAediting_1489729(42251401, -), CAediting_1489730(42251409, -), CAediting_1489731(42251424, -), CAediting_1489732(42251437, -), CAediting_1489733(42251449, -), CAediting_1489734(42251454, -), CAediting_1489735(42251455, -), CAediting_1489736(42251477, -), CAediting_1489737(42251565, -), CAediting_1489738(42251599, -), CAediting_1489739(42251600, -), CAediting_1489740(42251618, -), CAediting_1489741(42251641, -), CAediting_1489742(42251650, -), CAediting_1489743(42251716, -), CAediting_1489744(42251730, -), CAediting_1489745(42251735, -), CAediting_1489746(42251753, -), CAediting_1489747(42251987, -), CAediting_1489748(42252000, -), CAediting_1489749(42252098, -), CAediting_1489750(42255292, -), CAediting_1489751(42256902, -), CAediting_1489752(42256925, -), CAediting_1489753(42257076, -), CAediting_1489754(42259923, -), CAediting_1489755(42261867, -), CAediting_1489756(42265400, -), CAediting_1489757(42265406, -), CAediting_1489758(42265411, -), CAediting_1489759(42265433, -), CAediting_1489760(42265447, -), CAediting_1489761(42267184, -), CAediting_1489762(42267619, -), CAediting_1489763(42279401, -), CAediting_1489764(42313668, -), CAediting_1489765(42313738, -), CAediting_1489766(42313748, -), CAediting_1489767(42313793, -), CAediting_1489768(42316551, -), CAediting_1489769(42316576, -), CAediting_1489770(42316602, -), CAediting_1489771(42316717, -), CAediting_1489772(42316725, -), CAediting_1489773(42321690, -), CAediting_1489774(42321696, -), CAediting_1489775(42321743, -),

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RNA editing positional annotations for TCF20 using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1489649	chr22_42211041_-	nonsynonymous SNV	ENST00000335626.7	c.A4265G	p.Q1422R	D	B	N
CAediting_1489649	chr22_42211041_-	nonsynonymous SNV	ENST00000359486.6	c.A4265G	p.Q1422R	D	B	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1489559	chr22_42161887_-	intronic
CAediting_1489560	chr22_42161890_-	intronic
CAediting_1489561	chr22_42161903_-	intronic
CAediting_1489562	chr22_42161920_-	intronic
CAediting_1489563	chr22_42161936_-	intronic
CAediting_1489564	chr22_42161957_-	intronic
CAediting_1489565	chr22_42162035_-	intronic
CAediting_1489566	chr22_42162043_-	intronic
CAediting_1489567	chr22_42162077_-	intronic
CAediting_1489568	chr22_42162078_-	intronic
CAediting_1489569	chr22_42162083_-	intronic
CAediting_1489570	chr22_42162089_-	intronic
CAediting_1489571	chr22_42162118_-	intronic
CAediting_1489572	chr22_42162125_-	intronic
CAediting_1489573	chr22_42162145_-	intronic
CAediting_1489574	chr22_42162151_-	intronic
CAediting_1489575	chr22_42162154_-	intronic
CAediting_1489576	chr22_42162159_-	intronic
CAediting_1489577	chr22_42162160_-	intronic
CAediting_1489578	chr22_42162169_-	intronic
CAediting_1489579	chr22_42162177_-	intronic
CAediting_1489580	chr22_42162190_-	intronic
CAediting_1489581	chr22_42162195_-	intronic
CAediting_1489582	chr22_42162214_-	intronic
CAediting_1489583	chr22_42162244_-	intronic
CAediting_1489584	chr22_42164267_-	intronic
CAediting_1489585	chr22_42164326_-	intronic
CAediting_1489586	chr22_42164334_-	intronic
CAediting_1489587	chr22_42164353_-	intronic
CAediting_1489588	chr22_42164389_-	intronic
CAediting_1489589	chr22_42164490_-	intronic
CAediting_1489590	chr22_42164498_-	intronic
CAediting_1489591	chr22_42164505_-	intronic
CAediting_1489592	chr22_42164514_-	intronic
CAediting_1489593	chr22_42166363_-	intronic
CAediting_1489594	chr22_42166364_-	intronic
CAediting_1489595	chr22_42166365_-	intronic
CAediting_1489596	chr22_42166428_-	intronic
CAediting_1489597	chr22_42166464_-	intronic
CAediting_1489598	chr22_42166476_-	intronic
CAediting_1489599	chr22_42166562_-	intronic
CAediting_1489600	chr22_42166565_-	intronic
CAediting_1489601	chr22_42167774_-	intronic
CAediting_1489602	chr22_42167788_-	intronic
CAediting_1489603	chr22_42167825_-	intronic
CAediting_1489604	chr22_42167847_-	intronic
CAediting_1489605	chr22_42167851_-	intronic
CAediting_1489606	chr22_42167861_-	intronic
CAediting_1489607	chr22_42167871_-	intronic
CAediting_1489608	chr22_42167890_-	intronic
CAediting_1489609	chr22_42167928_-	intronic
CAediting_1489610	chr22_42167960_-	intronic
CAediting_1489611	chr22_42167973_-	intronic
CAediting_1489612	chr22_42167994_-	intronic
CAediting_1489613	chr22_42170305_-	intronic
CAediting_1489614	chr22_42175469_-	intronic
CAediting_1489615	chr22_42175479_-	intronic
CAediting_1489616	chr22_42177212_-	intronic
CAediting_1489617	chr22_42177252_-	intronic
CAediting_1489618	chr22_42177315_-	intronic
CAediting_1489619	chr22_42177339_-	intronic
CAediting_1489620	chr22_42177371_-	intronic
CAediting_1489621	chr22_42177383_-	intronic
CAediting_1489622	chr22_42177396_-	intronic
CAediting_1489623	chr22_42178694_-	intronic
CAediting_1489624	chr22_42178727_-	intronic
CAediting_1489625	chr22_42178750_-	intronic
CAediting_1489626	chr22_42178758_-	intronic
CAediting_1489627	chr22_42178759_-	intronic
CAediting_1489628	chr22_42178762_-	intronic
CAediting_1489629	chr22_42178773_-	intronic
CAediting_1489630	chr22_42178781_-	intronic
CAediting_1489631	chr22_42178783_-	intronic
CAediting_1489632	chr22_42178799_-	intronic
CAediting_1489633	chr22_42178807_-	intronic
CAediting_1489634	chr22_42190261_-	intronic
CAediting_1489635	chr22_42190262_-	intronic
CAediting_1489636	chr22_42190287_-	intronic
CAediting_1489637	chr22_42193429_-	intronic
CAediting_1489638	chr22_42194803_-	intronic
CAediting_1489639	chr22_42194854_-	intronic
CAediting_1489640	chr22_42195161_-	intronic
CAediting_1489641	chr22_42195164_-	intronic
CAediting_1489642	chr22_42196082_-	intronic
CAediting_1489643	chr22_42196088_-	intronic
CAediting_1489644	chr22_42196093_-	intronic
CAediting_1489645	chr22_42196131_-	intronic
CAediting_1489646	chr22_42199774_-	intronic
CAediting_1489647	chr22_42204302_-	intronic
CAediting_1489648	chr22_42206047_-	intronic
CAediting_1489649	chr22_42211041_-	exonic
CAediting_1489650	chr22_42215553_-	intronic
CAediting_1489651	chr22_42215581_-	intronic
CAediting_1489652	chr22_42215636_-	intronic
CAediting_1489653	chr22_42215648_-	intronic
CAediting_1489654	chr22_42215766_-	intronic
CAediting_1489655	chr22_42216125_-	intronic
CAediting_1489656	chr22_42216182_-	intronic
CAediting_1489657	chr22_42216187_-	intronic
CAediting_1489658	chr22_42216201_-	intronic
CAediting_1489659	chr22_42216205_-	intronic
CAediting_1489660	chr22_42216211_-	intronic
CAediting_1489661	chr22_42216213_-	intronic
CAediting_1489662	chr22_42216219_-	intronic
CAediting_1489663	chr22_42216220_-	intronic
CAediting_1489664	chr22_42216221_-	intronic
CAediting_1489665	chr22_42216228_-	intronic
CAediting_1489666	chr22_42219127_-	intronic
CAediting_1489667	chr22_42219265_-	intronic
CAediting_1489668	chr22_42221835_-	intronic
CAediting_1489669	chr22_42221867_-	intronic
CAediting_1489670	chr22_42221899_-	intronic
CAediting_1489671	chr22_42221903_-	intronic
CAediting_1489672	chr22_42224396_-	intronic
CAediting_1489673	chr22_42225160_-	intronic
CAediting_1489674	chr22_42225169_-	intronic
CAediting_1489675	chr22_42225199_-	intronic
CAediting_1489676	chr22_42225200_-	intronic
CAediting_1489677	chr22_42225223_-	intronic
CAediting_1489678	chr22_42225242_-	intronic
CAediting_1489679	chr22_42225251_-	intronic
CAediting_1489680	chr22_42225268_-	intronic
CAediting_1489681	chr22_42226593_-	intronic
CAediting_1489682	chr22_42226642_-	intronic
CAediting_1489683	chr22_42227167_-	intronic
CAediting_1489684	chr22_42233006_-	intronic
CAediting_1489685	chr22_42233014_-	intronic
CAediting_1489686	chr22_42233017_-	intronic
CAediting_1489687	chr22_42233049_-	intronic
CAediting_1489688	chr22_42233059_-	intronic
CAediting_1489689	chr22_42234883_-	intronic
CAediting_1489690	chr22_42241687_-	intronic
CAediting_1489691	chr22_42244845_-	intronic
CAediting_1489692	chr22_42244868_-	intronic
CAediting_1489693	chr22_42245242_-	intronic
CAediting_1489694	chr22_42245244_-	intronic
CAediting_1489695	chr22_42245252_-	intronic
CAediting_1489696	chr22_42245283_-	intronic
CAediting_1489697	chr22_42245311_-	intronic
CAediting_1489698	chr22_42245358_-	intronic
CAediting_1489699	chr22_42246166_-	intronic
CAediting_1489700	chr22_42246173_-	intronic
CAediting_1489701	chr22_42246202_-	intronic
CAediting_1489702	chr22_42246203_-	intronic
CAediting_1489703	chr22_42246216_-	intronic
CAediting_1489704	chr22_42246233_-	intronic
CAediting_1489705	chr22_42246242_-	intronic
CAediting_1489706	chr22_42246243_-	intronic
CAediting_1489707	chr22_42246269_-	intronic
CAediting_1489708	chr22_42246273_-	intronic
CAediting_1489709	chr22_42246278_-	intronic
CAediting_1489710	chr22_42246287_-	intronic
CAediting_1489711	chr22_42246298_-	intronic
CAediting_1489712	chr22_42246299_-	intronic
CAediting_1489713	chr22_42246300_-	intronic
CAediting_1489714	chr22_42246308_-	intronic
CAediting_1489715	chr22_42246309_-	intronic
CAediting_1489716	chr22_42246323_-	intronic
CAediting_1489717	chr22_42246324_-	intronic
CAediting_1489718	chr22_42246331_-	intronic
CAediting_1489719	chr22_42246332_-	intronic
CAediting_1489720	chr22_42246333_-	intronic
CAediting_1489721	chr22_42246366_-	intronic
CAediting_1489722	chr22_42251263_-	intronic
CAediting_1489723	chr22_42251272_-	intronic
CAediting_1489724	chr22_42251292_-	intronic
CAediting_1489725	chr22_42251324_-	intronic
CAediting_1489726	chr22_42251330_-	intronic
CAediting_1489727	chr22_42251375_-	intronic
CAediting_1489728	chr22_42251385_-	intronic
CAediting_1489729	chr22_42251401_-	intronic
CAediting_1489730	chr22_42251409_-	intronic
CAediting_1489731	chr22_42251424_-	intronic
CAediting_1489732	chr22_42251437_-	intronic
CAediting_1489733	chr22_42251449_-	intronic
CAediting_1489734	chr22_42251454_-	intronic
CAediting_1489735	chr22_42251455_-	intronic
CAediting_1489736	chr22_42251477_-	intronic
CAediting_1489737	chr22_42251565_-	intronic
CAediting_1489738	chr22_42251599_-	intronic
CAediting_1489739	chr22_42251600_-	intronic
CAediting_1489740	chr22_42251618_-	intronic
CAediting_1489741	chr22_42251641_-	intronic
CAediting_1489742	chr22_42251650_-	intronic
CAediting_1489743	chr22_42251716_-	intronic
CAediting_1489744	chr22_42251730_-	intronic
CAediting_1489745	chr22_42251735_-	intronic
CAediting_1489746	chr22_42251753_-	intronic
CAediting_1489747	chr22_42251987_-	intronic
CAediting_1489748	chr22_42252000_-	intronic
CAediting_1489749	chr22_42252098_-	intronic
CAediting_1489750	chr22_42255292_-	intronic
CAediting_1489751	chr22_42256902_-	intronic
CAediting_1489752	chr22_42256925_-	intronic
CAediting_1489753	chr22_42257076_-	intronic
CAediting_1489754	chr22_42259923_-	intronic
CAediting_1489755	chr22_42261867_-	intronic
CAediting_1489756	chr22_42265400_-	intronic
CAediting_1489757	chr22_42265406_-	intronic
CAediting_1489758	chr22_42265411_-	intronic
CAediting_1489759	chr22_42265433_-	intronic
CAediting_1489760	chr22_42265447_-	intronic
CAediting_1489761	chr22_42267184_-	intronic
CAediting_1489762	chr22_42267619_-	intronic
CAediting_1489763	chr22_42279401_-	intronic
CAediting_1489764	chr22_42313668_-	intronic
CAediting_1489765	chr22_42313738_-	intronic
CAediting_1489766	chr22_42313748_-	intronic
CAediting_1489767	chr22_42313793_-	intronic
CAediting_1489768	chr22_42316551_-	intronic
CAediting_1489769	chr22_42316576_-	intronic
CAediting_1489770	chr22_42316602_-	intronic
CAediting_1489771	chr22_42316717_-	intronic
CAediting_1489772	chr22_42316725_-	intronic
CAediting_1489773	chr22_42321690_-	intronic
CAediting_1489774	chr22_42321696_-	intronic
CAediting_1489775	chr22_42321743_-	intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1489559	chr22_42161887_-	SINE	Alu	AluJb
CAediting_1489560	chr22_42161890_-	SINE	Alu	AluJb
CAediting_1489561	chr22_42161903_-	SINE	Alu	AluJb
CAediting_1489562	chr22_42161920_-	SINE	Alu	AluJb
CAediting_1489563	chr22_42161936_-	SINE	Alu	AluJb
CAediting_1489564	chr22_42161957_-	SINE	Alu	AluJb
CAediting_1489565	chr22_42162035_-	SINE	Alu	AluSz6
CAediting_1489566	chr22_42162043_-	SINE	Alu	AluSz6
CAediting_1489567	chr22_42162077_-	SINE	Alu	AluSz6
CAediting_1489568	chr22_42162078_-	SINE	Alu	AluSz6
CAediting_1489569	chr22_42162083_-	SINE	Alu	AluSz6
CAediting_1489570	chr22_42162089_-	SINE	Alu	AluSz6
CAediting_1489571	chr22_42162118_-	SINE	Alu	AluSz6
CAediting_1489572	chr22_42162125_-	SINE	Alu	AluSz6
CAediting_1489573	chr22_42162145_-	SINE	Alu	AluSz6
CAediting_1489574	chr22_42162151_-	SINE	Alu	AluSz6
CAediting_1489575	chr22_42162154_-	SINE	Alu	AluSz6
CAediting_1489576	chr22_42162159_-	SINE	Alu	AluSz6
CAediting_1489577	chr22_42162160_-	SINE	Alu	AluSz6
CAediting_1489578	chr22_42162169_-	SINE	Alu	AluSz6
CAediting_1489579	chr22_42162177_-	SINE	Alu	AluSz6
CAediting_1489580	chr22_42162190_-	SINE	Alu	AluSz6
CAediting_1489581	chr22_42162195_-	SINE	Alu	AluSz6
CAediting_1489582	chr22_42162214_-	SINE	Alu	AluSz6
CAediting_1489583	chr22_42162244_-	SINE	Alu	AluSz6
CAediting_1489584	chr22_42164267_-	SINE	Alu	AluY
CAediting_1489585	chr22_42164326_-	SINE	Alu	AluY
CAediting_1489586	chr22_42164334_-	SINE	Alu	AluY
CAediting_1489587	chr22_42164353_-	SINE	Alu	AluY
CAediting_1489588	chr22_42164389_-	SINE	Alu	AluY
CAediting_1489589	chr22_42164490_-	SINE	Alu	AluY
CAediting_1489590	chr22_42164498_-	SINE	Alu	AluY
CAediting_1489591	chr22_42164505_-	SINE	Alu	AluY
CAediting_1489592	chr22_42164514_-	SINE	Alu	AluY
CAediting_1489593	chr22_42166363_-	SINE	Alu	AluSz
CAediting_1489594	chr22_42166364_-	SINE	Alu	AluSz
CAediting_1489595	chr22_42166365_-	SINE	Alu	AluSz
CAediting_1489596	chr22_42166428_-	SINE	Alu	AluSz
CAediting_1489597	chr22_42166464_-	SINE	Alu	AluSz
CAediting_1489598	chr22_42166476_-	SINE	Alu	AluSz
CAediting_1489599	chr22_42166562_-	SINE	Alu	AluSz
CAediting_1489600	chr22_42166565_-	SINE	Alu	AluSz
CAediting_1489601	chr22_42167774_-	SINE	Alu	AluJb
CAediting_1489602	chr22_42167788_-	SINE	Alu	AluJb
CAediting_1489603	chr22_42167825_-	SINE	Alu	AluJb
CAediting_1489604	chr22_42167847_-	SINE	Alu	AluJb
CAediting_1489605	chr22_42167851_-	SINE	Alu	AluJb
CAediting_1489606	chr22_42167861_-	SINE	Alu	AluJb
CAediting_1489607	chr22_42167871_-	SINE	Alu	AluJb
CAediting_1489608	chr22_42167890_-	SINE	Alu	AluJb
CAediting_1489609	chr22_42167928_-	SINE	Alu	AluJb
CAediting_1489610	chr22_42167960_-	SINE	Alu	AluJb
CAediting_1489611	chr22_42167973_-	SINE	Alu	AluJb
CAediting_1489612	chr22_42167994_-	SINE	Alu	AluJb
CAediting_1489613	chr22_42170305_-	SINE	Alu	AluJr
CAediting_1489614	chr22_42175469_-	SINE	Alu	AluSx3
CAediting_1489615	chr22_42175479_-	SINE	Alu	AluSx3
CAediting_1489616	chr22_42177212_-	SINE	Alu	AluSq2
CAediting_1489617	chr22_42177252_-	SINE	Alu	AluSq2
CAediting_1489618	chr22_42177315_-	SINE	Alu	AluSq2
CAediting_1489619	chr22_42177339_-	SINE	Alu	AluSq2
CAediting_1489620	chr22_42177371_-	SINE	Alu	AluSq2
CAediting_1489621	chr22_42177383_-	SINE	Alu	AluSq2
CAediting_1489622	chr22_42177396_-	SINE	Alu	AluSq2
CAediting_1489623	chr22_42178694_-	SINE	Alu	AluSg
CAediting_1489624	chr22_42178727_-	SINE	Alu	AluSg
CAediting_1489625	chr22_42178750_-	SINE	Alu	AluSg
CAediting_1489626	chr22_42178758_-	SINE	Alu	AluSg
CAediting_1489627	chr22_42178759_-	SINE	Alu	AluSg
CAediting_1489628	chr22_42178762_-	SINE	Alu	AluSg
CAediting_1489629	chr22_42178773_-	SINE	Alu	AluSg
CAediting_1489630	chr22_42178781_-	SINE	Alu	AluSg
CAediting_1489631	chr22_42178783_-	SINE	Alu	AluSg
CAediting_1489632	chr22_42178799_-	SINE	Alu	AluSg
CAediting_1489633	chr22_42178807_-	SINE	Alu	AluSg
CAediting_1489634	chr22_42190261_-	SINE	Alu	AluJr
CAediting_1489635	chr22_42190262_-	SINE	Alu	AluJr
CAediting_1489636	chr22_42190287_-	SINE	Alu	AluJr
CAediting_1489637	chr22_42193429_-	SINE	Alu	AluJo
CAediting_1489646	chr22_42199774_-	SINE	Alu	AluSq
CAediting_1489647	chr22_42204302_-	SINE	Alu	AluSz
CAediting_1489648	chr22_42206047_-	SINE	Alu	AluSx1
CAediting_1489650	chr22_42215553_-	SINE	Alu	AluSx3
CAediting_1489651	chr22_42215581_-	SINE	Alu	AluSx3
CAediting_1489652	chr22_42215636_-	SINE	Alu	AluSx3
CAediting_1489653	chr22_42215648_-	SINE	Alu	AluSx3
CAediting_1489654	chr22_42215766_-	SINE	Alu	AluSx3
CAediting_1489655	chr22_42216125_-	SINE	Alu	AluJo
CAediting_1489656	chr22_42216182_-	SINE	Alu	AluJo
CAediting_1489657	chr22_42216187_-	SINE	Alu	AluJo
CAediting_1489658	chr22_42216201_-	SINE	Alu	AluJo
CAediting_1489659	chr22_42216205_-	SINE	Alu	AluJo
CAediting_1489660	chr22_42216211_-	SINE	Alu	AluJo
CAediting_1489661	chr22_42216213_-	SINE	Alu	AluJo
CAediting_1489662	chr22_42216219_-	SINE	Alu	AluJo
CAediting_1489663	chr22_42216220_-	SINE	Alu	AluJo
CAediting_1489664	chr22_42216221_-	SINE	Alu	AluJo
CAediting_1489665	chr22_42216228_-	SINE	Alu	AluJo
CAediting_1489666	chr22_42219127_-	SINE	Alu	AluJr
CAediting_1489667	chr22_42219265_-	SINE	Alu	AluJr
CAediting_1489668	chr22_42221835_-	SINE	Alu	AluYk3
CAediting_1489669	chr22_42221867_-	SINE	Alu	AluYk3
CAediting_1489670	chr22_42221899_-	SINE	Alu	AluYk3
CAediting_1489671	chr22_42221903_-	SINE	Alu	AluYk3
CAediting_1489672	chr22_42224396_-	SINE	Alu	AluY
CAediting_1489673	chr22_42225160_-	SINE	Alu	AluSx1
CAediting_1489674	chr22_42225169_-	SINE	Alu	AluSx1
CAediting_1489675	chr22_42225199_-	SINE	Alu	AluSx1
CAediting_1489676	chr22_42225200_-	SINE	Alu	AluSx1
CAediting_1489677	chr22_42225223_-	SINE	Alu	AluSx1
CAediting_1489678	chr22_42225242_-	SINE	Alu	AluSx1
CAediting_1489679	chr22_42225251_-	SINE	Alu	AluSx1
CAediting_1489680	chr22_42225268_-	SINE	Alu	AluSx1
CAediting_1489681	chr22_42226593_-	SINE	Alu	AluSx1
CAediting_1489682	chr22_42226642_-	SINE	Alu	AluSx1
CAediting_1489683	chr22_42227167_-	SINE	Alu	AluSz6
CAediting_1489684	chr22_42233006_-	SINE	Alu	AluSz
CAediting_1489685	chr22_42233014_-	SINE	Alu	AluSz
CAediting_1489686	chr22_42233017_-	SINE	Alu	AluSz
CAediting_1489687	chr22_42233049_-	SINE	Alu	AluSz
CAediting_1489688	chr22_42233059_-	SINE	Alu	AluSz
CAediting_1489689	chr22_42234883_-	SINE	Alu	AluSg
CAediting_1489690	chr22_42241687_-	SINE	Alu	AluSz6
CAediting_1489691	chr22_42244845_-	SINE	Alu	AluJb
CAediting_1489692	chr22_42244868_-	SINE	Alu	AluJb
CAediting_1489693	chr22_42245242_-	SINE	Alu	AluJo
CAediting_1489694	chr22_42245244_-	SINE	Alu	AluJo
CAediting_1489695	chr22_42245252_-	SINE	Alu	AluJo
CAediting_1489696	chr22_42245283_-	SINE	Alu	AluJo
CAediting_1489697	chr22_42245311_-	SINE	Alu	AluJo
CAediting_1489698	chr22_42245358_-	SINE	Alu	AluJo
CAediting_1489699	chr22_42246166_-	SINE	Alu	AluSz
CAediting_1489700	chr22_42246173_-	SINE	Alu	AluSz
CAediting_1489701	chr22_42246202_-	SINE	Alu	AluSz
CAediting_1489702	chr22_42246203_-	SINE	Alu	AluSz
CAediting_1489703	chr22_42246216_-	SINE	Alu	AluSz
CAediting_1489704	chr22_42246233_-	SINE	Alu	AluSz
CAediting_1489705	chr22_42246242_-	SINE	Alu	AluSz
CAediting_1489706	chr22_42246243_-	SINE	Alu	AluSz
CAediting_1489707	chr22_42246269_-	SINE	Alu	AluSz
CAediting_1489708	chr22_42246273_-	SINE	Alu	AluSz
CAediting_1489709	chr22_42246278_-	SINE	Alu	AluSz
CAediting_1489710	chr22_42246287_-	SINE	Alu	AluSz
CAediting_1489711	chr22_42246298_-	SINE	Alu	AluSz
CAediting_1489712	chr22_42246299_-	SINE	Alu	AluSz
CAediting_1489713	chr22_42246300_-	SINE	Alu	AluSz
CAediting_1489714	chr22_42246308_-	SINE	Alu	AluSz
CAediting_1489715	chr22_42246309_-	SINE	Alu	AluSz
CAediting_1489716	chr22_42246323_-	SINE	Alu	AluSz
CAediting_1489717	chr22_42246324_-	SINE	Alu	AluSz
CAediting_1489718	chr22_42246331_-	SINE	Alu	AluSz
CAediting_1489719	chr22_42246332_-	SINE	Alu	AluSz
CAediting_1489720	chr22_42246333_-	SINE	Alu	AluSz
CAediting_1489721	chr22_42246366_-	SINE	Alu	AluSz
CAediting_1489722	chr22_42251263_-	SINE	Alu	AluJb
CAediting_1489723	chr22_42251272_-	SINE	Alu	AluJb
CAediting_1489724	chr22_42251292_-	SINE	Alu	AluJb
CAediting_1489725	chr22_42251324_-	SINE	Alu	AluJb
CAediting_1489726	chr22_42251330_-	SINE	Alu	AluJb
CAediting_1489727	chr22_42251375_-	SINE	Alu	AluJb
CAediting_1489728	chr22_42251385_-	SINE	Alu	AluJb
CAediting_1489729	chr22_42251401_-	SINE	Alu	AluJb
CAediting_1489730	chr22_42251409_-	SINE	Alu	AluJb
CAediting_1489731	chr22_42251424_-	SINE	Alu	AluJb
CAediting_1489732	chr22_42251437_-	SINE	Alu	AluJb
CAediting_1489733	chr22_42251449_-	SINE	Alu	AluJb
CAediting_1489734	chr22_42251454_-	SINE	Alu	AluJb
CAediting_1489735	chr22_42251455_-	SINE	Alu	AluJb
CAediting_1489736	chr22_42251477_-	SINE	Alu	AluJb
CAediting_1489737	chr22_42251565_-	SINE	Alu	AluSz6
CAediting_1489738	chr22_42251599_-	SINE	Alu	AluSz6
CAediting_1489739	chr22_42251600_-	SINE	Alu	AluSz6
CAediting_1489740	chr22_42251618_-	SINE	Alu	AluSz6
CAediting_1489741	chr22_42251641_-	SINE	Alu	AluSz6
CAediting_1489742	chr22_42251650_-	SINE	Alu	AluSz6
CAediting_1489743	chr22_42251716_-	SINE	Alu	AluSz6
CAediting_1489744	chr22_42251730_-	SINE	Alu	AluSz6
CAediting_1489745	chr22_42251735_-	SINE	Alu	AluSz6
CAediting_1489746	chr22_42251753_-	SINE	Alu	AluSz6
CAediting_1489747	chr22_42251987_-	SINE	Alu	AluSx
CAediting_1489748	chr22_42252000_-	SINE	Alu	AluSx
CAediting_1489749	chr22_42252098_-	SINE	Alu	AluSx
CAediting_1489750	chr22_42255292_-	SINE	Alu	AluSc
CAediting_1489751	chr22_42256902_-	SINE	Alu	AluJr
CAediting_1489752	chr22_42256925_-	SINE	Alu	AluJr
CAediting_1489753	chr22_42257076_-	SINE	Alu	AluJr
CAediting_1489754	chr22_42259923_-	SINE	Alu	AluJr
CAediting_1489755	chr22_42261867_-	SINE	Alu	AluSg
CAediting_1489756	chr22_42265400_-	SINE	Alu	AluJb
CAediting_1489757	chr22_42265406_-	SINE	Alu	AluJb
CAediting_1489758	chr22_42265411_-	SINE	Alu	AluJb
CAediting_1489759	chr22_42265433_-	SINE	Alu	AluJb
CAediting_1489760	chr22_42265447_-	SINE	Alu	AluJb
CAediting_1489761	chr22_42267184_-	SINE	Alu	AluSp
CAediting_1489762	chr22_42267619_-	SINE	Alu	AluSc
CAediting_1489763	chr22_42279401_-	SINE	Alu	AluSx1
CAediting_1489764	chr22_42313668_-	SINE	Alu	AluSz
CAediting_1489765	chr22_42313738_-	SINE	Alu	AluSz
CAediting_1489766	chr22_42313748_-	SINE	Alu	AluSz
CAediting_1489767	chr22_42313793_-	SINE	Alu	AluSz
CAediting_1489768	chr22_42316551_-	SINE	Alu	AluSz
CAediting_1489769	chr22_42316576_-	SINE	Alu	AluSz
CAediting_1489770	chr22_42316602_-	SINE	Alu	AluSz
CAediting_1489771	chr22_42316717_-	SINE	Alu	AluSz
CAediting_1489772	chr22_42316725_-	SINE	Alu	AluSz
CAediting_1489773	chr22_42321690_-	SINE	Alu	AluSx1
CAediting_1489774	chr22_42321696_-	SINE	Alu	AluSx1
CAediting_1489775	chr22_42321743_-	SINE	Alu	AluSx1

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RNA A-to-I editing events in the alternative splicing sites for TCF20

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000100207.17.TCF20.

Correlation between RNA A-to-I editing and PSI for ENSG00000100207.17.TCF20.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCF20

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TCF20

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TCF20

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_396018	chr5_1062918_-	ENSG00000100207.17	ENST00000359486	hsa-miR-4635	42160556	42160562	7mer-m8	42160555	42160575	163	-25.83
CAediting_442554	chr5_154685830_+	ENSG00000100207.17	ENST00000359486	hsa-miR-1303	42160961	42160968	8mer-1a	42160961	42160982	140	-16.5
CAediting_468389	chr6_31355314_-	ENSG00000100207.17	ENST00000359486	hsa-miR-6891-5p	42160505	42160511	7mer-m8	42160504	42160522	149	-17.83

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_573001	chr7_92204086_-	ENSG00000100207.17	ENST00000359486	hsa-miR-1285-5p	42160925	42160931	7mer-m8	42160924	42160947	148	-11.99
CAediting_688080	chr9_63819626_+	ENSG00000100207.17	ENST00000359486	hsa-miR-4477b	42161230	42161236	7mer-m8	42161229	42161251	147	-10.09

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TCF20

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TCF20

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

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Relation with cancer stages for TCF20

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TCF20

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TCF20

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TCF20

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TCF20	C0023893	Liver Cirrhosis, Experimental	1	CTD_human
TCF20	C0424605	Developmental delay (disorder)	1	GENOMICS_ENGLAND
TCF20	C0557874	Global developmental delay	1	GENOMICS_ENGLAND
TCF20	C3714756	Intellectual Disability	1	GENOMICS_ENGLAND

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene