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Editing gene: TCEA1 (CAeditome ID:6917)

Gene summary for TCEA1

Gene summary

Gene information	Gene symbol	TCEA1
	Gene ID	6917
	Gene name	transcription elongation factor A1
	Synonyms	GTF2S\|SII\|TCEA\|TF2S\|TFIIS
	Cytomap	8q11.23
	Type of gene	protein-coding
	Description	transcription elongation factor A protein 1epididymis secretory sperm binding proteintranscription elongation factor A (SII), 1transcription elongation factor S-II protein 1transcription elongation factor TFIIS.otranscription factor IIS
	Modification date	20210518
	UniProtAcc	P23193
	Context	- 30416857(Abnormal expression of YEATS4 associates with poor prognosis and promotes cell proliferation of hepatic carcinoma cell by regulation the TCEA1/DDX3 axis)

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TCEA1	GO:0005654	Transcription elongation factor A protein 1	0000052
TCEA1	GO:0005730	Transcription elongation factor A protein 1	0000052
TCEA1	GO:0005669	Transcription elongation factor A protein 1	27193682

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RNA A-to-I events for TCEA1

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000187735.11

RNA A-to-I editing events in Cancer.

CAediting_638928(53968729, -), CAediting_638929(53974665, -), CAediting_638930(53974692, -), CAediting_638931(53974704, -), CAediting_638932(53974708, -), CAediting_638933(53974711, -), CAediting_638934(53974809, -), CAediting_638935(53974811, -), CAediting_638936(53981813, -), CAediting_638937(53981825, -), CAediting_638938(53981826, -), CAediting_638939(53981844, -), CAediting_638940(53981845, -), CAediting_638941(53981850, -), CAediting_638942(53981855, -), CAediting_638943(53981861, -), CAediting_638944(53981877, -), CAediting_638945(53981881, -), CAediting_638946(53981885, -), CAediting_638947(53981890, -), CAediting_638948(53981891, -), CAediting_638949(53981928, -), CAediting_638950(53981953, -), CAediting_638951(53981989, -), CAediting_638952(53981997, -), CAediting_638953(53982007, -), CAediting_638954(53982015, -), CAediting_638955(53982020, -), CAediting_638956(53982037, -), CAediting_638957(53982038, -), CAediting_638958(53982055, -), CAediting_638959(53982404, -), CAediting_638960(53982416, -), CAediting_638961(53983991, -), CAediting_638962(53983992, -), CAediting_638963(53984043, -), CAediting_638964(53984056, -), CAediting_638965(53984694, -), CAediting_638966(53984719, -), CAediting_638967(53984800, -), CAediting_638968(53984806, -), CAediting_638969(53984880, -), CAediting_638970(53985181, -), CAediting_638971(53985187, -), CAediting_638972(53988849, -), CAediting_638973(53989894, -), CAediting_638974(53989898, -), CAediting_638975(53989902, -), CAediting_638976(53989908, -), CAediting_638977(53989933, -), CAediting_638978(53989934, -), CAediting_638979(53989940, -), CAediting_638980(53990083, -), CAediting_638981(53990087, -), CAediting_638982(53990091, -), CAediting_638983(53990098, -), CAediting_638984(53990103, -), CAediting_638985(53990116, -), CAediting_638986(53990122, -), CAediting_638987(53990130, -), CAediting_638988(53990160, -), CAediting_638989(53990176, -), CAediting_638990(53990282, -), CAediting_638991(53990314, -), CAediting_638992(53990333, -), CAediting_638993(53990379, -), CAediting_638994(53990398, -), CAediting_638995(53990435, -), CAediting_638996(53990436, -), CAediting_638997(53990439, -), CAediting_638998(53990447, -), CAediting_638999(53990459, -), CAediting_639000(53990477, -), CAediting_639001(53990483, -), CAediting_639002(53990490, -), CAediting_639003(53990494, -), CAediting_639004(53990508, -), CAediting_639005(53990510, -), CAediting_639006(53990515, -), CAediting_639007(53990526, -), CAediting_639008(53990562, -), CAediting_639009(53990570, -), CAediting_639010(53990595, -), CAediting_639011(53990600, -), CAediting_639012(53990609, -), CAediting_639013(53990613, -), CAediting_639014(53990628, -), CAediting_639015(53990631, -), CAediting_639016(53990636, -), CAediting_639017(53990643, -), CAediting_639018(53991136, -), CAediting_639019(53991145, -), CAediting_639020(53991148, -), CAediting_639021(53991204, -), CAediting_639022(53991225, -), CAediting_639023(53991230, -), CAediting_639024(53991249, -), CAediting_639025(53991293, -), CAediting_639026(53991311, -), CAediting_639027(53991317, -), CAediting_639028(53991359, -), CAediting_639029(53991438, -), CAediting_639030(53991444, -), CAediting_639031(53991478, -), CAediting_639032(53991503, -), CAediting_639033(53991532, -), CAediting_639034(53991570, -), CAediting_639035(53991582, -), CAediting_639036(53991586, -), CAediting_639037(53991594, -), CAediting_639038(53991647, -), CAediting_639039(53991648, -), CAediting_639040(53991661, -), CAediting_639041(53991689, -), CAediting_639042(53992037, -), CAediting_639043(53992047, -), CAediting_639044(53992077, -), CAediting_639045(53992095, -), CAediting_639046(53992100, -), CAediting_639047(53992118, -), CAediting_639048(53992129, -), CAediting_639049(53992149, -), CAediting_639050(53992190, -), CAediting_639051(53992228, -), CAediting_639052(53992229, -), CAediting_639053(53992278, -), CAediting_639054(53992396, -), CAediting_639055(53992421, -), CAediting_639056(53992450, -), CAediting_639057(53992486, -), CAediting_639058(53992498, -), CAediting_639059(53992501, -), CAediting_639060(53992524, -), CAediting_639061(53992535, -), CAediting_639062(53992548, -), CAediting_639063(53992564, -), CAediting_639064(53992603, -), CAediting_639065(53993015, -), CAediting_639066(53993020, -), CAediting_639067(53993021, -), CAediting_639068(53993038, -), CAediting_639069(53993049, -), CAediting_639070(53993058, -), CAediting_639071(53993074, -), CAediting_639072(53993081, -), CAediting_639073(53993085, -), CAediting_639074(53993091, -), CAediting_639075(53993166, -), CAediting_639076(53993174, -), CAediting_639077(53993176, -), CAediting_639078(53993177, -), CAediting_639079(53993186, -), CAediting_639080(53993189, -), CAediting_639081(53993200, -), CAediting_639082(53993205, -), CAediting_639083(53993210, -), CAediting_639084(53993228, -), CAediting_639085(53993247, -), CAediting_639086(53993251, -), CAediting_639087(53997070, -), CAediting_639088(53997145, -), CAediting_639089(53997180, -), CAediting_639090(53997647, -), CAediting_639091(53997653, -), CAediting_639092(53997727, -), CAediting_639093(54006868, -), CAediting_639094(54007044, -), CAediting_639095(54007098, -), CAediting_639096(54008922, -), CAediting_639097(54008938, -), CAediting_639098(54008946, -), CAediting_639099(54008947, -), CAediting_639100(54008952, -), CAediting_639101(54008955, -), CAediting_639102(54008988, -), CAediting_639103(54009028, -), CAediting_639104(54015308, -), CAediting_639105(54017863, -), CAediting_639106(54017876, -), CAediting_639107(54020944, -),

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RNA editing positional annotations for TCEA1 using Annovar

Protein coding RNA editing(s).

CAeditome ID

Position

Variant type

ENST

NTchange

AAchange

SIFT_score

Polyphen2_HVAR_score

PROVEAN_pred

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_638928	chr8_53968729_-	ncRNA_intronic
CAediting_638929	chr8_53974665_-	ncRNA_intronic
CAediting_638930	chr8_53974692_-	ncRNA_intronic
CAediting_638931	chr8_53974704_-	ncRNA_intronic
CAediting_638932	chr8_53974708_-	ncRNA_intronic
CAediting_638933	chr8_53974711_-	ncRNA_intronic
CAediting_638934	chr8_53974809_-	ncRNA_intronic
CAediting_638935	chr8_53974811_-	ncRNA_intronic
CAediting_638936	chr8_53981813_-	ncRNA_intronic
CAediting_638937	chr8_53981825_-	ncRNA_intronic
CAediting_638938	chr8_53981826_-	ncRNA_intronic
CAediting_638939	chr8_53981844_-	ncRNA_intronic
CAediting_638940	chr8_53981845_-	ncRNA_intronic
CAediting_638941	chr8_53981850_-	ncRNA_intronic
CAediting_638942	chr8_53981855_-	ncRNA_intronic
CAediting_638943	chr8_53981861_-	ncRNA_intronic
CAediting_638944	chr8_53981877_-	ncRNA_intronic
CAediting_638945	chr8_53981881_-	ncRNA_intronic
CAediting_638946	chr8_53981885_-	ncRNA_intronic
CAediting_638947	chr8_53981890_-	ncRNA_intronic
CAediting_638948	chr8_53981891_-	ncRNA_intronic
CAediting_638949	chr8_53981928_-	ncRNA_intronic
CAediting_638950	chr8_53981953_-	ncRNA_intronic
CAediting_638951	chr8_53981989_-	ncRNA_intronic
CAediting_638952	chr8_53981997_-	ncRNA_intronic
CAediting_638953	chr8_53982007_-	ncRNA_intronic
CAediting_638954	chr8_53982015_-	ncRNA_intronic
CAediting_638955	chr8_53982020_-	ncRNA_intronic
CAediting_638956	chr8_53982037_-	ncRNA_intronic
CAediting_638957	chr8_53982038_-	ncRNA_intronic
CAediting_638958	chr8_53982055_-	ncRNA_intronic
CAediting_638959	chr8_53982404_-	ncRNA_intronic
CAediting_638960	chr8_53982416_-	ncRNA_intronic
CAediting_638961	chr8_53983991_-	ncRNA_intronic
CAediting_638962	chr8_53983992_-	ncRNA_intronic
CAediting_638963	chr8_53984043_-	ncRNA_intronic
CAediting_638964	chr8_53984056_-	ncRNA_intronic
CAediting_638965	chr8_53984694_-	ncRNA_intronic
CAediting_638966	chr8_53984719_-	ncRNA_intronic
CAediting_638967	chr8_53984800_-	ncRNA_intronic
CAediting_638968	chr8_53984806_-	ncRNA_intronic
CAediting_638969	chr8_53984880_-	ncRNA_intronic
CAediting_638970	chr8_53985181_-	ncRNA_intronic
CAediting_638971	chr8_53985187_-	ncRNA_intronic
CAediting_638972	chr8_53988849_-	ncRNA_intronic
CAediting_638973	chr8_53989894_-	ncRNA_intronic
CAediting_638974	chr8_53989898_-	ncRNA_intronic
CAediting_638975	chr8_53989902_-	ncRNA_intronic
CAediting_638976	chr8_53989908_-	ncRNA_intronic
CAediting_638977	chr8_53989933_-	ncRNA_intronic
CAediting_638978	chr8_53989934_-	ncRNA_intronic
CAediting_638979	chr8_53989940_-	ncRNA_intronic
CAediting_638980	chr8_53990083_-	ncRNA_intronic
CAediting_638981	chr8_53990087_-	ncRNA_intronic
CAediting_638982	chr8_53990091_-	ncRNA_intronic
CAediting_638983	chr8_53990098_-	ncRNA_intronic
CAediting_638984	chr8_53990103_-	ncRNA_intronic
CAediting_638985	chr8_53990116_-	ncRNA_intronic
CAediting_638986	chr8_53990122_-	ncRNA_intronic
CAediting_638987	chr8_53990130_-	ncRNA_intronic
CAediting_638988	chr8_53990160_-	ncRNA_intronic
CAediting_638989	chr8_53990176_-	ncRNA_intronic
CAediting_638990	chr8_53990282_-	ncRNA_intronic
CAediting_638991	chr8_53990314_-	ncRNA_intronic
CAediting_638992	chr8_53990333_-	ncRNA_intronic
CAediting_638993	chr8_53990379_-	ncRNA_intronic
CAediting_638994	chr8_53990398_-	ncRNA_intronic
CAediting_638995	chr8_53990435_-	ncRNA_intronic
CAediting_638996	chr8_53990436_-	ncRNA_intronic
CAediting_638997	chr8_53990439_-	ncRNA_intronic
CAediting_638998	chr8_53990447_-	ncRNA_intronic
CAediting_638999	chr8_53990459_-	ncRNA_intronic
CAediting_639000	chr8_53990477_-	ncRNA_intronic
CAediting_639001	chr8_53990483_-	ncRNA_intronic
CAediting_639002	chr8_53990490_-	ncRNA_intronic
CAediting_639003	chr8_53990494_-	ncRNA_intronic
CAediting_639004	chr8_53990508_-	ncRNA_intronic
CAediting_639005	chr8_53990510_-	ncRNA_intronic
CAediting_639006	chr8_53990515_-	ncRNA_intronic
CAediting_639007	chr8_53990526_-	ncRNA_intronic
CAediting_639008	chr8_53990562_-	ncRNA_intronic
CAediting_639009	chr8_53990570_-	ncRNA_intronic
CAediting_639010	chr8_53990595_-	ncRNA_intronic
CAediting_639011	chr8_53990600_-	ncRNA_intronic
CAediting_639012	chr8_53990609_-	ncRNA_intronic
CAediting_639013	chr8_53990613_-	ncRNA_intronic
CAediting_639014	chr8_53990628_-	ncRNA_intronic
CAediting_639015	chr8_53990631_-	ncRNA_intronic
CAediting_639016	chr8_53990636_-	ncRNA_intronic
CAediting_639017	chr8_53990643_-	ncRNA_intronic
CAediting_639018	chr8_53991136_-	ncRNA_intronic
CAediting_639019	chr8_53991145_-	ncRNA_intronic
CAediting_639020	chr8_53991148_-	ncRNA_intronic
CAediting_639021	chr8_53991204_-	ncRNA_intronic
CAediting_639022	chr8_53991225_-	ncRNA_intronic
CAediting_639023	chr8_53991230_-	ncRNA_intronic
CAediting_639024	chr8_53991249_-	ncRNA_intronic
CAediting_639025	chr8_53991293_-	ncRNA_intronic
CAediting_639026	chr8_53991311_-	ncRNA_intronic
CAediting_639027	chr8_53991317_-	ncRNA_intronic
CAediting_639028	chr8_53991359_-	ncRNA_intronic
CAediting_639029	chr8_53991438_-	ncRNA_intronic
CAediting_639030	chr8_53991444_-	ncRNA_intronic
CAediting_639031	chr8_53991478_-	ncRNA_intronic
CAediting_639032	chr8_53991503_-	ncRNA_intronic
CAediting_639033	chr8_53991532_-	ncRNA_intronic
CAediting_639034	chr8_53991570_-	ncRNA_intronic
CAediting_639035	chr8_53991582_-	ncRNA_intronic
CAediting_639036	chr8_53991586_-	ncRNA_intronic
CAediting_639037	chr8_53991594_-	ncRNA_intronic
CAediting_639038	chr8_53991647_-	ncRNA_intronic
CAediting_639039	chr8_53991648_-	ncRNA_intronic
CAediting_639040	chr8_53991661_-	ncRNA_intronic
CAediting_639041	chr8_53991689_-	ncRNA_intronic
CAediting_639042	chr8_53992037_-	ncRNA_intronic
CAediting_639043	chr8_53992047_-	ncRNA_intronic
CAediting_639044	chr8_53992077_-	ncRNA_intronic
CAediting_639045	chr8_53992095_-	ncRNA_intronic
CAediting_639046	chr8_53992100_-	ncRNA_intronic
CAediting_639047	chr8_53992118_-	ncRNA_intronic
CAediting_639048	chr8_53992129_-	ncRNA_intronic
CAediting_639049	chr8_53992149_-	ncRNA_intronic
CAediting_639050	chr8_53992190_-	ncRNA_intronic
CAediting_639051	chr8_53992228_-	ncRNA_intronic
CAediting_639052	chr8_53992229_-	ncRNA_intronic
CAediting_639053	chr8_53992278_-	ncRNA_intronic
CAediting_639054	chr8_53992396_-	ncRNA_intronic
CAediting_639055	chr8_53992421_-	ncRNA_intronic
CAediting_639056	chr8_53992450_-	ncRNA_intronic
CAediting_639057	chr8_53992486_-	ncRNA_intronic
CAediting_639058	chr8_53992498_-	ncRNA_intronic
CAediting_639059	chr8_53992501_-	ncRNA_intronic
CAediting_639060	chr8_53992524_-	ncRNA_intronic
CAediting_639061	chr8_53992535_-	ncRNA_intronic
CAediting_639062	chr8_53992548_-	ncRNA_intronic
CAediting_639063	chr8_53992564_-	ncRNA_intronic
CAediting_639064	chr8_53992603_-	ncRNA_intronic
CAediting_639065	chr8_53993015_-	ncRNA_intronic
CAediting_639066	chr8_53993020_-	ncRNA_intronic
CAediting_639067	chr8_53993021_-	ncRNA_intronic
CAediting_639068	chr8_53993038_-	ncRNA_intronic
CAediting_639069	chr8_53993049_-	ncRNA_intronic
CAediting_639070	chr8_53993058_-	ncRNA_intronic
CAediting_639071	chr8_53993074_-	ncRNA_intronic
CAediting_639072	chr8_53993081_-	ncRNA_intronic
CAediting_639073	chr8_53993085_-	ncRNA_intronic
CAediting_639074	chr8_53993091_-	ncRNA_intronic
CAediting_639075	chr8_53993166_-	ncRNA_intronic
CAediting_639076	chr8_53993174_-	ncRNA_intronic
CAediting_639077	chr8_53993176_-	ncRNA_intronic
CAediting_639078	chr8_53993177_-	ncRNA_intronic
CAediting_639079	chr8_53993186_-	ncRNA_intronic
CAediting_639080	chr8_53993189_-	ncRNA_intronic
CAediting_639081	chr8_53993200_-	ncRNA_intronic
CAediting_639082	chr8_53993205_-	ncRNA_intronic
CAediting_639083	chr8_53993210_-	ncRNA_intronic
CAediting_639084	chr8_53993228_-	ncRNA_intronic
CAediting_639085	chr8_53993247_-	ncRNA_intronic
CAediting_639086	chr8_53993251_-	ncRNA_intronic
CAediting_639087	chr8_53997070_-	ncRNA_intronic
CAediting_639088	chr8_53997145_-	ncRNA_intronic
CAediting_639089	chr8_53997180_-	ncRNA_intronic
CAediting_639090	chr8_53997647_-	ncRNA_intronic
CAediting_639091	chr8_53997653_-	ncRNA_intronic
CAediting_639092	chr8_53997727_-	ncRNA_intronic
CAediting_639093	chr8_54006868_-	ncRNA_intronic
CAediting_639094	chr8_54007044_-	ncRNA_intronic
CAediting_639095	chr8_54007098_-	ncRNA_intronic
CAediting_639096	chr8_54008922_-	ncRNA_intronic
CAediting_639097	chr8_54008938_-	ncRNA_intronic
CAediting_639098	chr8_54008946_-	ncRNA_intronic
CAediting_639099	chr8_54008947_-	ncRNA_intronic
CAediting_639100	chr8_54008952_-	ncRNA_intronic
CAediting_639101	chr8_54008955_-	ncRNA_intronic
CAediting_639102	chr8_54008988_-	ncRNA_intronic
CAediting_639103	chr8_54009028_-	ncRNA_intronic
CAediting_639104	chr8_54015308_-	ncRNA_intronic
CAediting_639105	chr8_54017863_-	ncRNA_intronic
CAediting_639106	chr8_54017876_-	ncRNA_intronic
CAediting_639107	chr8_54020944_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_638928	chr8_53968729_-	SINE	Alu	AluSc8
CAediting_638929	chr8_53974665_-	SINE	Alu	AluSq2
CAediting_638930	chr8_53974692_-	SINE	Alu	AluSq2
CAediting_638931	chr8_53974704_-	SINE	Alu	AluSq2
CAediting_638932	chr8_53974708_-	SINE	Alu	AluSq2
CAediting_638933	chr8_53974711_-	SINE	Alu	AluSq2
CAediting_638934	chr8_53974809_-	SINE	Alu	AluSq2
CAediting_638935	chr8_53974811_-	SINE	Alu	AluSq2
CAediting_638936	chr8_53981813_-	SINE	Alu	AluJr
CAediting_638937	chr8_53981825_-	SINE	Alu	AluJr
CAediting_638938	chr8_53981826_-	SINE	Alu	AluJr
CAediting_638939	chr8_53981844_-	SINE	Alu	AluJr
CAediting_638940	chr8_53981845_-	SINE	Alu	AluJr
CAediting_638941	chr8_53981850_-	SINE	Alu	AluJr
CAediting_638942	chr8_53981855_-	SINE	Alu	AluJr
CAediting_638943	chr8_53981861_-	SINE	Alu	AluJr
CAediting_638944	chr8_53981877_-	SINE	Alu	AluJr
CAediting_638945	chr8_53981881_-	SINE	Alu	AluJr
CAediting_638946	chr8_53981885_-	SINE	Alu	AluJr
CAediting_638947	chr8_53981890_-	SINE	Alu	AluJr
CAediting_638948	chr8_53981891_-	SINE	Alu	AluJr
CAediting_638949	chr8_53981928_-	SINE	Alu	AluJr
CAediting_638950	chr8_53981953_-	SINE	Alu	AluJr
CAediting_638951	chr8_53981989_-	SINE	Alu	AluJr
CAediting_638952	chr8_53981997_-	SINE	Alu	AluJr
CAediting_638953	chr8_53982007_-	SINE	Alu	AluJr
CAediting_638954	chr8_53982015_-	SINE	Alu	AluJr
CAediting_638955	chr8_53982020_-	SINE	Alu	AluJr
CAediting_638956	chr8_53982037_-	SINE	Alu	AluJr
CAediting_638957	chr8_53982038_-	SINE	Alu	AluJr
CAediting_638958	chr8_53982055_-	SINE	Alu	AluJr
CAediting_638959	chr8_53982404_-	SINE	Alu	AluSq2
CAediting_638960	chr8_53982416_-	SINE	Alu	AluSq2
CAediting_638961	chr8_53983991_-	SINE	Alu	AluSp
CAediting_638962	chr8_53983992_-	SINE	Alu	AluSp
CAediting_638963	chr8_53984043_-	SINE	Alu	AluSp
CAediting_638964	chr8_53984056_-	SINE	Alu	AluSp
CAediting_638965	chr8_53984694_-	SINE	Alu	AluSc8
CAediting_638966	chr8_53984719_-	SINE	Alu	AluSc8
CAediting_638967	chr8_53984800_-	SINE	Alu	AluSc8
CAediting_638968	chr8_53984806_-	SINE	Alu	AluSc8
CAediting_638969	chr8_53984880_-	SINE	Alu	AluSc8
CAediting_638970	chr8_53985181_-	SINE	Alu	AluSx1
CAediting_638971	chr8_53985187_-	SINE	Alu	AluSx1
CAediting_638972	chr8_53988849_-	SINE	Alu	AluSz
CAediting_638973	chr8_53989894_-	SINE	Alu	AluJo
CAediting_638974	chr8_53989898_-	SINE	Alu	AluJo
CAediting_638975	chr8_53989902_-	SINE	Alu	AluJo
CAediting_638976	chr8_53989908_-	SINE	Alu	AluJo
CAediting_638977	chr8_53989933_-	SINE	Alu	AluJo
CAediting_638978	chr8_53989934_-	SINE	Alu	AluJo
CAediting_638979	chr8_53989940_-	SINE	Alu	AluJo
CAediting_638980	chr8_53990083_-	SINE	Alu	AluSx
CAediting_638981	chr8_53990087_-	SINE	Alu	AluSx
CAediting_638982	chr8_53990091_-	SINE	Alu	AluSx
CAediting_638983	chr8_53990098_-	SINE	Alu	AluSx
CAediting_638984	chr8_53990103_-	SINE	Alu	AluSx
CAediting_638985	chr8_53990116_-	SINE	Alu	AluSx
CAediting_638986	chr8_53990122_-	SINE	Alu	AluSx
CAediting_638987	chr8_53990130_-	SINE	Alu	AluSx
CAediting_638988	chr8_53990160_-	SINE	Alu	AluSx
CAediting_638989	chr8_53990176_-	SINE	Alu	AluSx
CAediting_638990	chr8_53990282_-	SINE	Alu	AluJr
CAediting_638991	chr8_53990314_-	SINE	Alu	AluJr
CAediting_638992	chr8_53990333_-	SINE	Alu	AluJr
CAediting_638993	chr8_53990379_-	SINE	Alu	AluJb
CAediting_638994	chr8_53990398_-	SINE	Alu	AluJb
CAediting_638995	chr8_53990435_-	SINE	Alu	AluJb
CAediting_638996	chr8_53990436_-	SINE	Alu	AluJb
CAediting_638997	chr8_53990439_-	SINE	Alu	AluJb
CAediting_638998	chr8_53990447_-	SINE	Alu	AluJb
CAediting_638999	chr8_53990459_-	SINE	Alu	AluJb
CAediting_639000	chr8_53990477_-	SINE	Alu	AluJb
CAediting_639001	chr8_53990483_-	SINE	Alu	AluJb
CAediting_639002	chr8_53990490_-	SINE	Alu	AluJb
CAediting_639003	chr8_53990494_-	SINE	Alu	AluJb
CAediting_639004	chr8_53990508_-	SINE	Alu	AluJb
CAediting_639005	chr8_53990510_-	SINE	Alu	AluJb
CAediting_639006	chr8_53990515_-	SINE	Alu	AluJb
CAediting_639007	chr8_53990526_-	SINE	Alu	AluJb
CAediting_639008	chr8_53990562_-	SINE	Alu	AluJb
CAediting_639009	chr8_53990570_-	SINE	Alu	AluJb
CAediting_639010	chr8_53990595_-	SINE	Alu	AluJb
CAediting_639011	chr8_53990600_-	SINE	Alu	AluJb
CAediting_639012	chr8_53990609_-	SINE	Alu	AluJb
CAediting_639013	chr8_53990613_-	SINE	Alu	AluJb
CAediting_639014	chr8_53990628_-	SINE	Alu	AluJb
CAediting_639015	chr8_53990631_-	SINE	Alu	AluJb
CAediting_639016	chr8_53990636_-	SINE	Alu	AluJb
CAediting_639017	chr8_53990643_-	SINE	Alu	AluJb
CAediting_639018	chr8_53991136_-	SINE	Alu	AluSz
CAediting_639019	chr8_53991145_-	SINE	Alu	AluSz
CAediting_639020	chr8_53991148_-	SINE	Alu	AluSz
CAediting_639021	chr8_53991204_-	SINE	Alu	AluSz
CAediting_639022	chr8_53991225_-	SINE	Alu	AluSz
CAediting_639023	chr8_53991230_-	SINE	Alu	AluSz
CAediting_639024	chr8_53991249_-	SINE	Alu	AluSz
CAediting_639025	chr8_53991293_-	SINE	Alu	AluSz
CAediting_639026	chr8_53991311_-	SINE	Alu	AluSz
CAediting_639027	chr8_53991317_-	SINE	Alu	AluSz
CAediting_639028	chr8_53991359_-	SINE	Alu	AluSz
CAediting_639029	chr8_53991438_-	SINE	Alu	AluSp
CAediting_639030	chr8_53991444_-	SINE	Alu	AluSp
CAediting_639031	chr8_53991478_-	SINE	Alu	AluSp
CAediting_639032	chr8_53991503_-	SINE	Alu	AluSp
CAediting_639033	chr8_53991532_-	SINE	Alu	AluSp
CAediting_639034	chr8_53991570_-	SINE	Alu	AluSp
CAediting_639035	chr8_53991582_-	SINE	Alu	AluSp
CAediting_639036	chr8_53991586_-	SINE	Alu	AluSp
CAediting_639037	chr8_53991594_-	SINE	Alu	AluSp
CAediting_639038	chr8_53991647_-	SINE	Alu	AluSp
CAediting_639039	chr8_53991648_-	SINE	Alu	AluSp
CAediting_639040	chr8_53991661_-	SINE	Alu	AluSp
CAediting_639041	chr8_53991689_-	SINE	Alu	AluSp
CAediting_639042	chr8_53992037_-	SINE	Alu	AluSx
CAediting_639043	chr8_53992047_-	SINE	Alu	AluSx
CAediting_639044	chr8_53992077_-	SINE	Alu	AluSx
CAediting_639045	chr8_53992095_-	SINE	Alu	AluSx
CAediting_639046	chr8_53992100_-	SINE	Alu	AluSx
CAediting_639047	chr8_53992118_-	SINE	Alu	AluSx
CAediting_639048	chr8_53992129_-	SINE	Alu	AluSx
CAediting_639049	chr8_53992149_-	SINE	Alu	AluSx
CAediting_639050	chr8_53992190_-	SINE	Alu	AluSx
CAediting_639051	chr8_53992228_-	SINE	Alu	AluSx
CAediting_639052	chr8_53992229_-	SINE	Alu	AluSx
CAediting_639053	chr8_53992278_-	SINE	Alu	AluSx
CAediting_639054	chr8_53992396_-	SINE	Alu	AluSx1
CAediting_639055	chr8_53992421_-	SINE	Alu	AluSx1
CAediting_639056	chr8_53992450_-	SINE	Alu	AluSx1
CAediting_639057	chr8_53992486_-	SINE	Alu	AluSx1
CAediting_639058	chr8_53992498_-	SINE	Alu	AluSx1
CAediting_639059	chr8_53992501_-	SINE	Alu	AluSx1
CAediting_639060	chr8_53992524_-	SINE	Alu	AluSx1
CAediting_639061	chr8_53992535_-	SINE	Alu	AluSx1
CAediting_639062	chr8_53992548_-	SINE	Alu	AluSx1
CAediting_639063	chr8_53992564_-	SINE	Alu	AluSx1
CAediting_639064	chr8_53992603_-	SINE	Alu	AluSx1
CAediting_639065	chr8_53993015_-	SINE	Alu	AluSz
CAediting_639066	chr8_53993020_-	SINE	Alu	AluSz
CAediting_639067	chr8_53993021_-	SINE	Alu	AluSz
CAediting_639068	chr8_53993038_-	SINE	Alu	AluSz
CAediting_639069	chr8_53993049_-	SINE	Alu	AluSz
CAediting_639070	chr8_53993058_-	SINE	Alu	AluSz
CAediting_639071	chr8_53993074_-	SINE	Alu	AluSz
CAediting_639072	chr8_53993081_-	SINE	Alu	AluSz
CAediting_639073	chr8_53993085_-	SINE	Alu	AluSz
CAediting_639074	chr8_53993091_-	SINE	Alu	AluSz
CAediting_639075	chr8_53993166_-	SINE	Alu	AluSz
CAediting_639076	chr8_53993174_-	SINE	Alu	AluSz
CAediting_639077	chr8_53993176_-	SINE	Alu	AluSz
CAediting_639078	chr8_53993177_-	SINE	Alu	AluSz
CAediting_639079	chr8_53993186_-	SINE	Alu	AluSz
CAediting_639080	chr8_53993189_-	SINE	Alu	AluSz
CAediting_639081	chr8_53993200_-	SINE	Alu	AluSz
CAediting_639082	chr8_53993205_-	SINE	Alu	AluSz
CAediting_639083	chr8_53993210_-	SINE	Alu	AluSz
CAediting_639084	chr8_53993228_-	SINE	Alu	AluSz
CAediting_639087	chr8_53997070_-	SINE	Alu	AluY
CAediting_639088	chr8_53997145_-	SINE	Alu	AluY
CAediting_639089	chr8_53997180_-	SINE	Alu	AluY
CAediting_639090	chr8_53997647_-	SINE	Alu	AluJo
CAediting_639091	chr8_53997653_-	SINE	Alu	AluJo
CAediting_639092	chr8_53997727_-	SINE	Alu	AluJo
CAediting_639093	chr8_54006868_-	SINE	Alu	AluSz
CAediting_639094	chr8_54007044_-	SINE	Alu	AluSz
CAediting_639095	chr8_54007098_-	SINE	Alu	AluSz
CAediting_639096	chr8_54008922_-	SINE	Alu	AluSz6
CAediting_639097	chr8_54008938_-	SINE	Alu	AluSz6
CAediting_639098	chr8_54008946_-	SINE	Alu	AluSz6
CAediting_639099	chr8_54008947_-	SINE	Alu	AluSz6
CAediting_639100	chr8_54008952_-	SINE	Alu	AluSz6
CAediting_639101	chr8_54008955_-	SINE	Alu	AluSz6
CAediting_639102	chr8_54008988_-	SINE	Alu	AluSz6
CAediting_639103	chr8_54009028_-	SINE	Alu	AluSz6
CAediting_639104	chr8_54015308_-	SINE	Alu	AluSg
CAediting_639105	chr8_54017863_-	SINE	Alu	AluSz
CAediting_639106	chr8_54017876_-	SINE	Alu	AluSz
CAediting_639107	chr8_54020944_-	SINE	Alu	AluSq2

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RNA A-to-I editing events in the alternative splicing sites for TCEA1

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000187735.11.TCEA1.

Correlation between RNA A-to-I editing and PSI for ENSG00000187735.11.TCEA1.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TCEA1

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TCEA1

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TCEA1

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_393	chr1_1167164_+	ENSG00000187735.11	ENST00000396401	hsa-miR-200b-3p	53966752	53966758	7mer-m8	53966751	53966776	150	-13.8
CAediting_393	chr1_1167164_+	ENSG00000187735.11	ENST00000521604	hsa-miR-200b-3p	53966752	53966758	7mer-m8	53966751	53966776	150	-13.8
CAediting_1229414	chr17_67471546_+	ENSG00000187735.11	ENST00000396401	hsa-miR-548aa	53967143	53967149	7mer-m8	53967142	53967166	153	-15.88
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000396401	hsa-miR-27a-3p	53967510	53967516	7mer-m8	53967509	53967531	149	-14.51
CAediting_117844	chr1_162342605_+	ENSG00000187735.11	ENST00000396401	hsa-miR-556-3p	53967835	53967841	7mer-m8	53967834	53967855	153	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000187735.11	ENST00000396401	hsa-miR-561-3p	53967843	53967849	7mer-m8	53967842	53967863	150	-9.93
CAediting_1229414	chr17_67471546_+	ENSG00000187735.11	ENST00000521604	hsa-miR-548aa	53967143	53967149	7mer-m8	53967142	53967166	153	-15.88
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000521604	hsa-miR-27a-3p	53967510	53967516	7mer-m8	53967509	53967531	149	-14.51
CAediting_117844	chr1_162342605_+	ENSG00000187735.11	ENST00000521604	hsa-miR-556-3p	53967835	53967841	7mer-m8	53967834	53967855	153	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000187735.11	ENST00000521604	hsa-miR-561-3p	53967843	53967849	7mer-m8	53967842	53967863	150	-9.93
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000522635	hsa-miR-27a-3p	53967510	53967516	7mer-m8	53967509	53967531	149	-14.51
CAediting_117844	chr1_162342605_+	ENSG00000187735.11	ENST00000522635	hsa-miR-556-3p	53967835	53967841	7mer-m8	53967834	53967855	153	-13.98
CAediting_228905	chr2_188297554_+	ENSG00000187735.11	ENST00000522635	hsa-miR-561-3p	53967843	53967849	7mer-m8	53967842	53967863	150	-9.93
CAediting_1229415	chr17_67471547_+	ENSG00000187735.11	ENST00000518784	hsa-miR-548aa	53999741	53999747	7mer-m8	53999740	53999765	155	-12.66
CAediting_228905	chr2_188297554_+	ENSG00000187735.11	ENST00000518784	hsa-miR-561-3p	53999711	53999717	7mer-m8	53999710	53999731	145	-11.26
CAediting_1351755	chr19_40282625_-	ENSG00000187735.11	ENST00000519704	hsa-miR-641	54002979	54002984	6mer	54002978	54003000	143	-17.76

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000396401	hsa-miR-27a-3p	53967780	53967787	8mer-1a	53967780	53967800	151	-17.22
CAediting_1229414	chr17_67471546_+	ENSG00000187735.11	ENST00000396401	hsa-miR-548aa	53967420	53967426	7mer-m8	53967419	53967442	154	-7.81
CAediting_1229415	chr17_67471547_+	ENSG00000187735.11	ENST00000396401	hsa-miR-548aa	53967420	53967426	7mer-m8	53967419	53967442	154	-7.81
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000521604	hsa-miR-27a-3p	53967780	53967787	8mer-1a	53967780	53967800	151	-17.22
CAediting_1229414	chr17_67471546_+	ENSG00000187735.11	ENST00000521604	hsa-miR-548aa	53967420	53967426	7mer-m8	53967419	53967442	154	-7.81
CAediting_1229415	chr17_67471547_+	ENSG00000187735.11	ENST00000521604	hsa-miR-548aa	53967420	53967426	7mer-m8	53967419	53967442	154	-7.81
CAediting_1306323	chr19_13836462_-	ENSG00000187735.11	ENST00000522635	hsa-miR-27a-3p	53967780	53967787	8mer-1a	53967780	53967800	151	-17.22
CAediting_1229415	chr17_67471547_+	ENSG00000187735.11	ENST00000522635	hsa-miR-548aa	53967420	53967426	7mer-m8	53967419	53967442	154	-7.81
CAediting_1229415	chr17_67471547_+	ENSG00000187735.11	ENST00000518784	hsa-miR-548aa	53999652	53999658	7mer-m8	53999651	53999677	144	-10.29

Differentially expressed gene-miRNA network

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The effects of the RNA editing to the stability of the RNA structures for TCEA1

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

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Relation with ADAR for TCEA1

Correlation between ADAR gene expression and RNA editing frequency

Cancer	CAeditomID	position	ADAR1 (p-val)	ADAR1 (coeff.)	ADAR2 (p-val)	ADAR2 (coeff.)	ADAR3 (p-val)	ADAR3 (coeff.)
STAD	CAediting_639081	chr8_53993200_-	0.0314250809561667	0.229576041005631	.	.	0.04901910550965	0.210487266651484

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Relation with cancer stages for TCEA1

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

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Relation with survival for TCEA1

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

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RelatedDrugs for TCEA1

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

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RelatedDiseases for TCEA1

Diseases associated with this gene.
(DisGeNet 7.0)

Gene

Disease ID

Disease name

# pubmeds

Source

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene