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Editing gene: TBXA2R (CAeditome ID:6915)

Gene summary for TBXA2R

Gene summary

Gene information	Gene symbol	TBXA2R
	Gene ID	6915
	Gene name	thromboxane A2 receptor
	Synonyms	BDPLT13\|TXA2-R
	Cytomap	19p13.3
	Type of gene	protein-coding
	Description	thromboxane A2 receptorprostanoid TP receptor
	Modification date	20210518
	UniProtAcc	P21731
	Context

Gene ontology of each this gene with evidence of Inferred from Direct Assay (IDA) from Entrez

Gene	GO ID	GO term	PubMed ID
TBXA2R	GO:0005886	Thromboxane A2 receptor	0000052
TBXA2R	GO:0016607	Thromboxane A2 receptor	0000052

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RNA A-to-I events for TBXA2R

RNA A-to-I editing events across TCGA 33 cancers data sets based on Ensembl gene isoform structure.

RNA editing frequencies across 33 cancers of gene: ENSG00000006638.10

RNA A-to-I editing events in Cancer.

CAediting_1275956(3594956, -), CAediting_1275957(3594958, -), CAediting_1275958(3594971, -), CAediting_1275959(3594980, -), CAediting_1275960(3594997, -), CAediting_1275961(3595017, -), CAediting_1275962(3595033, -), CAediting_1275963(3595104, -), CAediting_1275964(3595112, -), CAediting_1275965(3595122, -), CAediting_1275966(3595125, -), CAediting_1275967(3595134, -), CAediting_1275968(3595135, -), CAediting_1275969(3595144, -), CAediting_1275970(3595162, -), CAediting_1275971(3595167, -), CAediting_1275972(3595187, -), CAediting_1275973(3595213, -), CAediting_1275974(3595222, -), CAediting_1275975(3595230, -), CAediting_1275976(3595241, -), CAediting_1275977(3595257, -), CAediting_1275978(3595260, -), CAediting_1275979(3595267, -), CAediting_1275980(3595292, -), CAediting_1275981(3595296, -), CAediting_1275982(3595297, -), CAediting_1275983(3595327, -), CAediting_1275984(3595332, -), CAediting_1275985(3595346, -), CAediting_1275986(3595371, -), CAediting_1275987(3595377, -), CAediting_1275988(3599533, -), CAediting_1275989(3599535, -),

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RNA editing positional annotations for TBXA2R using Annovar

Protein coding RNA editing(s).

CAeditome ID	Position	Variant type	ENST	NTchange	AAchange	SIFT_score	Polyphen2_HVAR_score	PROVEAN_pred
CAediting_1275957	chr19_3594958_-	nonsynonymous SNV	ENST00000411851.3	c.A1102G	p.T368A	D	.	N
CAediting_1275960	chr19_3594997_-	nonsynonymous SNV	ENST00000411851.3	c.A1063G	p.S355G	D	.	N

Gene structure information of RNA editing(s).

CAeditome ID	Position	Variant type
CAediting_1275956	chr19_3594956_-	exonic
CAediting_1275957	chr19_3594958_-	exonic
CAediting_1275958	chr19_3594971_-	exonic
CAediting_1275959	chr19_3594980_-	exonic
CAediting_1275960	chr19_3594997_-	exonic
CAediting_1275961	chr19_3595017_-	exonic
CAediting_1275962	chr19_3595033_-	exonic
CAediting_1275963	chr19_3595104_-	UTR3
CAediting_1275964	chr19_3595112_-	UTR3
CAediting_1275965	chr19_3595122_-	UTR3
CAediting_1275966	chr19_3595125_-	UTR3
CAediting_1275967	chr19_3595134_-	UTR3
CAediting_1275968	chr19_3595135_-	UTR3
CAediting_1275969	chr19_3595144_-	UTR3
CAediting_1275970	chr19_3595162_-	UTR3
CAediting_1275971	chr19_3595167_-	UTR3
CAediting_1275972	chr19_3595187_-	UTR3
CAediting_1275973	chr19_3595213_-	UTR3
CAediting_1275974	chr19_3595222_-	UTR3
CAediting_1275975	chr19_3595230_-	UTR3
CAediting_1275976	chr19_3595241_-	UTR3
CAediting_1275977	chr19_3595257_-	UTR3
CAediting_1275978	chr19_3595260_-	UTR3
CAediting_1275979	chr19_3595267_-	UTR3
CAediting_1275980	chr19_3595292_-	UTR3
CAediting_1275981	chr19_3595296_-	UTR3
CAediting_1275982	chr19_3595297_-	UTR3
CAediting_1275983	chr19_3595327_-	UTR3
CAediting_1275984	chr19_3595332_-	UTR3
CAediting_1275985	chr19_3595346_-	UTR3
CAediting_1275986	chr19_3595371_-	UTR3
CAediting_1275987	chr19_3595377_-	UTR3
CAediting_1275988	chr19_3599533_-	ncRNA_intronic
CAediting_1275989	chr19_3599535_-	ncRNA_intronic

Repat-regional RNA editing(s).

CAeditome ID	Position	Repeat family	Repeat sub family	Repeat name
CAediting_1275956	chr19_3594956_-	SINE	Alu	AluSg4
CAediting_1275957	chr19_3594958_-	SINE	Alu	AluSg4
CAediting_1275958	chr19_3594971_-	SINE	Alu	AluSg4
CAediting_1275959	chr19_3594980_-	SINE	Alu	AluSg4
CAediting_1275960	chr19_3594997_-	SINE	Alu	AluSg4
CAediting_1275961	chr19_3595017_-	SINE	Alu	AluSg4
CAediting_1275962	chr19_3595033_-	SINE	Alu	AluSg4
CAediting_1275963	chr19_3595104_-	SINE	Alu	AluSx
CAediting_1275964	chr19_3595112_-	SINE	Alu	AluSx
CAediting_1275965	chr19_3595122_-	SINE	Alu	AluSx
CAediting_1275966	chr19_3595125_-	SINE	Alu	AluSx
CAediting_1275967	chr19_3595134_-	SINE	Alu	AluSx
CAediting_1275968	chr19_3595135_-	SINE	Alu	AluSx
CAediting_1275969	chr19_3595144_-	SINE	Alu	AluSx
CAediting_1275970	chr19_3595162_-	SINE	Alu	AluSx
CAediting_1275971	chr19_3595167_-	SINE	Alu	AluSx
CAediting_1275972	chr19_3595187_-	SINE	Alu	AluSx
CAediting_1275973	chr19_3595213_-	SINE	Alu	AluSx
CAediting_1275974	chr19_3595222_-	SINE	Alu	AluSx
CAediting_1275975	chr19_3595230_-	SINE	Alu	AluSx
CAediting_1275976	chr19_3595241_-	SINE	Alu	AluSx
CAediting_1275977	chr19_3595257_-	SINE	Alu	AluSx
CAediting_1275978	chr19_3595260_-	SINE	Alu	AluSx
CAediting_1275979	chr19_3595267_-	SINE	Alu	AluSx
CAediting_1275980	chr19_3595292_-	SINE	Alu	AluSx
CAediting_1275981	chr19_3595296_-	SINE	Alu	AluSx
CAediting_1275982	chr19_3595297_-	SINE	Alu	AluSx
CAediting_1275983	chr19_3595327_-	SINE	Alu	AluSx
CAediting_1275984	chr19_3595332_-	SINE	Alu	AluSx
CAediting_1275985	chr19_3595346_-	SINE	Alu	AluSx
CAediting_1275986	chr19_3595371_-	SINE	Alu	AluSx
CAediting_1275987	chr19_3595377_-	SINE	Alu	AluSx
CAediting_1275988	chr19_3599533_-	SINE	Alu	AluY
CAediting_1275989	chr19_3599535_-	SINE	Alu	AluY

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RNA A-to-I editing events in the alternative splicing sites for TBXA2R

RNA A-to-I editing(s) in the alternative splicing sites.

AStype

CAeditomID

Editing position

AS position

AS direction

Exonic location

Wildtype sequence

Wildtype splicing strength

RNA edited sequence

RNA edited splicing strength

Differential percent of spliced in (PSI) between RNA A-to-I edited and non-edited samples for ENSG00000006638.10.TBXA2R.

Correlation between RNA A-to-I editing and PSI for ENSG00000006638.10.TBXA2R.

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Differntial gene expression between RNA A-to-I edited versus non-edited samples for TBXA2R

Differential gene expressions between RNA A-to-I edited and non-edited tumor samples.
* The grey color means N/A.

Correlation between RNA A-to-I editing and gene expression.

- Differentially expressed gene between RNA A-to-I edited samples versus non-edited samples.
* Click on the image to enlarge it in a new window.

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Protein coding region RNA A-to-I editings for TBXA2R

- Lollipop plot for RNA A-to-I editings across protein structure.
* Click on the image to enlarge it in a new window.

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The effects of the RNA editing to the miRNA binding sites for TBXA2R

**If you are searching a miRNA gene with RNA editing events in its seed regions, please see the search pages of miRNA targets to discover the effects of this RNA editing event to miRNA regulations. For more information, please check the files in the Download page.

RNA A-to-I editing in the 3'-UTR regions of mRNA gained miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1275960	chr19_3594997_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4539	3594997	3595002	6mer	3594996	3595015	141.00	-21.82
CAediting_1275960	chr19_3594997_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6078	3594993	3595000	8mer-1a	3594993	3595011	149.00	-20.85
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-17-3p	3595017	3595023	7mer-m8	3595016	3595037	150.00	-17.84
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-485-5p	3595013	3595019	7mer-m8	3595012	3595032	153.00	-19.07
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6884-5p	3595013	3595019	7mer-m8	3595012	3595035	150.00	-23.90
CAediting_1275964	chr19_3595112_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6847-3p	3595111	3595117	7mer-m8	3595110	3595132	157.00	-22.17
CAediting_1275966	chr19_3595125_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6808-3p	3595120	3595126	7mer-m8	3595119	3595139	149.00	-17.10
CAediting_1275966	chr19_3595125_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7973	3595120	3595127	8mer-1a	3595120	3595139	154.00	-21.71
CAediting_1275966	chr19_3595125_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7973	3595120	3595127	8mer-1a	3595120	3595139	154.00	-21.71
CAediting_1275967	chr19_3595134_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3189-3p	3595133	3595139	7mer-m8	3595132	3595151	149.00	-22.02
CAediting_1275967	chr19_3595134_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6813-3p	3595132	3595138	7mer-m8	3595131	3595151	140.00	-10.90
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-326	3595133	3595139	7mer-m8	3595132	3595151	140.00	-13.47
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-330-5p	3595133	3595139	7mer-m8	3595132	3595155	148.00	-20.80
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4314	3595134	3595140	7mer-m8	3595133	3595151	143.00	-20.84
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-514a-5p	3595132	3595138	7mer-m8	3595131	3595154	150.00	-18.89
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-514a-5p	3595132	3595138	7mer-m8	3595131	3595154	150.00	-18.89
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-514a-5p	3595132	3595138	7mer-m8	3595131	3595154	150.00	-18.89
CAediting_1275971	chr19_3595167_-	ENSG00000006638.10	ENST00000589966	hsa-miR-665	3595167	3595173	7mer-m8	3595166	3595185	157.00	-22.68
CAediting_1275972	chr19_3595187_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3940-3p	3595183	3595189	7mer-m8	3595182	3595200	146.00	-24.53
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548ae-3p	3595225	3595231	7mer-m8	3595224	3595244	141.00	-10.65
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548ae-3p	3595225	3595231	7mer-m8	3595224	3595244	141.00	-10.65
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548ah-3p	3595225	3595231	7mer-m8	3595224	3595246	143.00	-11.29
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548aj-3p	3595225	3595231	7mer-m8	3595224	3595244	141.00	-8.54
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548aj-3p	3595225	3595231	7mer-m8	3595224	3595244	141.00	-8.54
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548am-3p	3595225	3595231	7mer-m8	3595224	3595246	143.00	-10.65
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548aq-3p	3595225	3595231	7mer-m8	3595224	3595245	141.00	-10.72
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548j-3p	3595225	3595231	7mer-m8	3595224	3595244	141.00	-10.65
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548x-3p	3595225	3595231	7mer-m8	3595224	3595243	141.00	-8.54
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548x-3p	3595225	3595231	7mer-m8	3595224	3595243	141.00	-8.54
CAediting_1275975	chr19_3595230_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7844-5p	3595227	3595233	7mer-m8	3595226	3595247	164.00	-22.52
CAediting_1275976	chr19_3595241_-	ENSG00000006638.10	ENST00000589966	hsa-miR-10394-3p	3595236	3595242	7mer-m8	3595235	3595256	145.00	-26.96
CAediting_1275976	chr19_3595241_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3178	3595236	3595242	7mer-m8	3595235	3595251	145.00	-25.12
CAediting_1275977	chr19_3595257_-	ENSG00000006638.10	ENST00000589966	hsa-miR-139-5p	3595254	3595260	7mer-m8	3595253	3595275	151.00	-18.79
CAediting_1275978	chr19_3595260_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3651	3595255	3595262	8mer-1a	3595255	3595279	146.00	-15.54
CAediting_1275978	chr19_3595260_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4323	3595257	3595264	8mer-1a	3595257	3595274	148.00	-20.43
CAediting_1275979	chr19_3595267_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4691-3p	3595263	3595269	7mer-m8	3595262	3595289	150.00	-26.36
CAediting_1275980	chr19_3595292_-	ENSG00000006638.10	ENST00000589966	hsa-miR-589-5p	3595287	3595293	7mer-m8	3595286	3595307	152.00	-15.04
CAediting_1275983	chr19_3595327_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4537	3595322	3595329	8mer-1a	3595322	3595344	151.00	-25.60
CAediting_1275984	chr19_3595332_-	ENSG00000006638.10	ENST00000589966	hsa-miR-191-3p	3595332	3595337	6mer	3595331	3595354	143.00	-23.96
CAediting_1275984	chr19_3595332_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3672	3595327	3595333	7mer-m8	3595326	3595348	140.00	-13.93
CAediting_1275984	chr19_3595332_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6864-3p	3595327	3595333	7mer-m8	3595326	3595345	149.00	-15.65
CAediting_1275984	chr19_3595332_-	ENSG00000006638.10	ENST00000589966	hsa-miR-873-3p	3595327	3595334	8mer-1a	3595327	3595353	141.00	-23.10
CAediting_1275958	chr19_3594971_-	ENSG00000006638.10	ENST00000589966	hsa-miR-1247-3p	3594970	3594976	7mer-m8	3594969	3594991	152.00	-22.62
CAediting_1275981	chr19_3595296_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4539	3595296	3595301	6mer	3595295	3595314	145.00	-21.50
CAediting_1275981	chr19_3595296_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6078	3595292	3595299	8mer-1a	3595292	3595310	149.00	-20.85
CAediting_1275986	chr19_3595371_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3667-5p	3595366	3595372	7mer-m8	3595365	3595387	155.00	-19.45

RNA A-to-I editing in the 3'-UTR regions of mRNA lost miRNA binding sites.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1275964	chr19_3595112_-	ENSG00000006638.10	ENST00000589966	hsa-miR-1206	3595111	3595117	7mer-m8	3595110	3595130	145	-11.47
CAediting_1275964	chr19_3595112_-	ENSG00000006638.10	ENST00000589966	hsa-miR-203a-5p	3595108	3595114	7mer-m8	3595107	3595131	148	-15.29
CAediting_1275983	chr19_3595327_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3160-3p	3595322	3595329	8mer-1a	3595322	3595343	152	-19.51
CAediting_1275983	chr19_3595327_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3160-3p	3595322	3595329	8mer-1a	3595322	3595343	152	-19.51
CAediting_1275972	chr19_3595187_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3190-5p	3595186	3595192	7mer-m8	3595185	3595203	152	-22.63
CAediting_1275970	chr19_3595162_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3622a-3p	3595157	3595164	8mer-1a	3595157	3595178	144	-13.55
CAediting_1275970	chr19_3595162_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3622b-3p	3595157	3595164	8mer-1a	3595157	3595177	153	-19.33
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-377-5p	3595013	3595019	7mer-m8	3595012	3595035	150	-17.59
CAediting_1275959	chr19_3594980_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3929	3594976	3594982	7mer-m8	3594975	3594996	152	-20.15
CAediting_1275963	chr19_3595104_-	ENSG00000006638.10	ENST00000589966	hsa-miR-3934-5p	3595100	3595106	7mer-m8	3595099	3595120	152	-23.05
CAediting_1275986	chr19_3595371_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4432	3595366	3595372	7mer-m8	3595365	3595385	150	-13.78
CAediting_1275959	chr19_3594980_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4478	3594976	3594982	7mer-m8	3594975	3594993	149	-24.84
CAediting_1275959	chr19_3594980_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4649-3p	3594979	3594985	7mer-m8	3594978	3594998	143	-14.99
CAediting_1275965	chr19_3595122_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4679	3595119	3595125	7mer-m8	3595118	3595139	152	-18.95
CAediting_1275965	chr19_3595122_-	ENSG00000006638.10	ENST00000589966	hsa-miR-4679	3595119	3595125	7mer-m8	3595118	3595139	152	-18.95
CAediting_1275985	chr19_3595346_-	ENSG00000006638.10	ENST00000589966	hsa-miR-508-5p	3595344	3595350	7mer-m8	3595343	3595367	148	-19.99
CAediting_1275984	chr19_3595332_-	ENSG00000006638.10	ENST00000589966	hsa-miR-5186	3595327	3595334	8mer-1a	3595327	3595347	140	-10.22
CAediting_1275972	chr19_3595187_-	ENSG00000006638.10	ENST00000589966	hsa-miR-548s	3595187	3595193	7mer-m8	3595186	3595208	149	-13.99
CAediting_1275978	chr19_3595260_-	ENSG00000006638.10	ENST00000589966	hsa-miR-5588-3p	3595257	3595264	8mer-1a	3595257	3595276	148	-17.06
CAediting_1275979	chr19_3595267_-	ENSG00000006638.10	ENST00000589966	hsa-miR-5690	3595263	3595269	7mer-m8	3595262	3595282	145	-17.72
CAediting_1275973	chr19_3595213_-	ENSG00000006638.10	ENST00000589966	hsa-miR-593-3p	3595208	3595213	6mer	3595207	3595225	140	-18.96
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6086	3595013	3595019	7mer-m8	3595012	3595031	150	-23.99
CAediting_1275985	chr19_3595346_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6512-3p	3595346	3595352	7mer-m8	3595345	3595366	140	-17.75
CAediting_1275961	chr19_3595017_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6516-5p	3595017	3595023	7mer-m8	3595016	3595041	147	-15.44
CAediting_1275985	chr19_3595346_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6720-5p	3595346	3595352	7mer-m8	3595345	3595366	152	-26.99
CAediting_1275958	chr19_3594971_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6771-5p	3594971	3594977	7mer-m8	3594970	3594989	155	-29.16
CAediting_1275965	chr19_3595122_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6811-3p	3595116	3595123	8mer-1a	3595116	3595133	151	-23.91
CAediting_1275959	chr19_3594980_-	ENSG00000006638.10	ENST00000589966	hsa-miR-6884-5p	3594975	3594981	7mer-m8	3594974	3594997	153	-22.34
CAediting_1275959	chr19_3594980_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7160-5p	3594978	3594984	7mer-m8	3594977	3594997	154	-24.39
CAediting_1275970	chr19_3595162_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7162-3p	3595161	3595167	7mer-m8	3595160	3595180	142	-17.47
CAediting_1275985	chr19_3595346_-	ENSG00000006638.10	ENST00000589966	hsa-miR-766-3p	3595345	3595351	7mer-m8	3595344	3595365	145	-20.72
CAediting_1275978	chr19_3595260_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7977	3595260	3595266	7mer-m8	3595259	3595275	145	-12.78
CAediting_1275966	chr19_3595125_-	ENSG00000006638.10	ENST00000589966	hsa-miR-7977	3595125	3595131	7mer-m8	3595124	3595141	140	-13.07
CAediting_1275964	chr19_3595112_-	ENSG00000006638.10	ENST00000589966	hsa-miR-876-3p	3595106	3595113	8mer-1a	3595106	3595127	146	-17.08
CAediting_1275968	chr19_3595135_-	ENSG00000006638.10	ENST00000589966	hsa-miR-887-5p	3595134	3595141	8mer-1a	3595134	3595153	143	-13.81

RNA A-to-I editing in lncRNA gained miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in lncRNA lost miRNA binding sites.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs lost binding to lncRNA.

CAeditom_ID

Position

ENSG

ENST

miRNA

Targetscan start

Targetscan end

Targetscan score

Miranda start

Miranda end

Miranda score

Miranda energy

RNA A-to-I editing in miRNAs gained binding to the 3'-UTR region of mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229414	chr17_67471546_+	ENSG00000006638.10	ENST00000589966	hsa-miR-548aa	3595177	3595183	7mer-m8	3595176	3595200	140	-13.04
CAediting_1160181	chr17_7017644_-	ENSG00000006638.10	ENST00000589966	hsa-miR-195-3p	3595410	3595415	6mer	3595409	3595431	143	-23.99
CAediting_580943	chr7_100356700_+	ENSG00000006638.10	ENST00000589966	hsa-miR-6840-3p	3595301	3595307	7mer-m8	3595300	3595321	143	-27.39
CAediting_580943	chr7_100356700_+	ENSG00000006638.10	ENST00000589966	hsa-miR-6840-3p	3595002	3595008	7mer-m8	3595001	3595017	141	-27.37
CAediting_524911	chr7_5495852_-	ENSG00000006638.10	ENST00000589966	hsa-miR-589-3p	3595360	3595366	7mer-m8	3595359	3595383	157	-19.02

RNA A-to-I editing in miRNAs lost binding to the 3'-UTR mRNA.

CAeditom_ID	Position	ENSG	ENST	miRNA	Targetscan start	Targetscan end	Targetscan score	Miranda start	Miranda end	Miranda score	Miranda energy
CAediting_1229413	chr17_67471544_+	ENSG00000006638.10	ENST00000589966	hsa-miR-548aa	3594780	3594787	8mer-1a	3594780	3594812	147	-5.31
CAediting_1229414	chr17_67471546_+	ENSG00000006638.10	ENST00000589966	hsa-miR-548aa	3594780	3594787	8mer-1a	3594780	3594812	147	-5.31

Differentially expressed gene-miRNA network

Top

The effects of the RNA editing to the stability of the RNA structures for TBXA2R

- RNA A-to-I editing in mRNA.
* Click on the image to enlarge it in a new window.

ENST

ENST type

RNA structure without RNA A-to-I editing.

RNA structure with RNA A-to-I editing.

RNA A-to-I editing in RNA structures for Minimum free energy (MFE).

CAeditom_ID

ENST

Editing_Position

MFE_withoneAI

MFE_withoutAI

MFE_withmultipleAI

Top

Relation with ADAR for TBXA2R

Correlation between ADAR gene expression and RNA editing frequency

Cancer

CAeditomID

position

ADAR1 (p-val)

ADAR1 (coeff.)

ADAR2 (p-val)

ADAR2 (coeff.)

ADAR3 (p-val)

ADAR3 (coeff.)

Top

Relation with cancer stages for TBXA2R

Correlation between Cancer stages and RNA editing frequency

Cancer

Stage_type

CAeditomID

position

P-val

Coeff.

Top

Relation with survival for TBXA2R

Correlation between RNA editing and survival

Cancer

CAeditomID

position

KMpvalue

Coxpvalue

CoxHR

Top

RelatedDrugs for TBXA2R

Approved drugs targeting this gene.
(DrugBank Version 5.1.8 2021-01-03)

Gene

UniProtAcc

DrugBank ID

Drug name

Drug activity

Drug type

Drug status

Top

RelatedDiseases for TBXA2R

Diseases associated with this gene.
(DisGeNet 7.0)

Gene	Disease ID	Disease name	# pubmeds	Source
TBXA2R	C3279614	BLEEDING DISORDER, PLATELET-TYPE, 13, SUSCEPTIBILITY TO	3	GENOMICS_ENGLAND;ORPHANET;UNIPROT
TBXA2R	C0005818	Blood Platelet Disorders	2	CTD_human
TBXA2R	C1319853	Asthma, Aspirin-Induced	2	CTD_human
TBXA2R	C0019087	Hemorrhagic Disorders	1	CTD_human
TBXA2R	C0019193	Hepatitis, Toxic	1	CTD_human
TBXA2R	C0027540	Necrosis	1	CTD_human
TBXA2R	C0034065	Pulmonary Embolism	1	CTD_human
TBXA2R	C0035455	Rhinitis	1	CTD_human
TBXA2R	C0524702	Pulmonary Thromboembolisms	1	CTD_human
TBXA2R	C0860207	Drug-Induced Liver Disease	1	CTD_human
TBXA2R	C1262760	Hepatitis, Drug-Induced	1	CTD_human
TBXA2R	C3658290	Drug-Induced Acute Liver Injury	1	CTD_human
TBXA2R	C4277682	Chemical and Drug Induced Liver Injury	1	CTD_human
TBXA2R	C4279912	Chemically-Induced Liver Toxicity	1	CTD_human

	Gene summary
	RNA A-to-I events
	Differntial gene expression between RNA A-to-I edited tumor samples versus normal samples
	Protein coding region RNA A-to-I editings
	The effects of the RNA editing to the miRNA binding sites
	The effects of the RNA editing to the stability of the RNA structures
	Relation with ADAR
	Relation with cancer stages
	Relation with survival state
	Related drugs with this gene
	Related diseases with this gene